Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1524
  Reference Plasmid   1111525849478674_bin.7__k141_169901
  Reference Plasmid Size   58571
  Reference Plasmid GC Content   0.65
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0003894 HHNEDKBO_00049 51169 6 Skin 0.50 protein_coding synonymous_variant LOW 288A>G Thr96Thr
M0003895 HHNEDKBO_00049 51340 3 Skin 0.25 protein_coding synonymous_variant LOW 459C>T Ser153Ser
M0003896 HHNEDKBO_00049 51532 4 Skin 0.33 protein_coding synonymous_variant LOW 651C>T Ile217Ile
M0003897 HHNEDKBO_00049 51628 5 Skin 0.42 protein_coding synonymous_variant LOW 747A>C Gly249Gly
M0003898 HHNEDKBO_00049 51784 3 Skin 0.25 protein_coding synonymous_variant LOW 903C>T Ala301Ala
M0003899 HHNEDKBO_00045 51855 5 Skin 0.42 protein_coding upstream_gene_variant MODIFIER -4018T>C None
M0003900 HHNEDKBO_00050 52205 5 Skin 0.42 protein_coding missense_variant MODERATE 244A>G Asn82Asp
M0003901 HHNEDKBO_00050 52366 3 Skin 0.25 protein_coding missense_variant MODERATE 405C>G Ser135Arg
M0003902 HHNEDKBO_00050 52371 5 Skin 0.42 protein_coding missense_variant MODERATE 410A>G Asp137Gly
M0003903 HHNEDKBO_00050 52393 5 Skin 0.42 protein_coding synonymous_variant LOW 432T>C Arg144Arg
M0003904 HHNEDKBO_00050 52486 5 Skin 0.42 protein_coding synonymous_variant LOW 525C>T Tyr175Tyr
M0003905 HHNEDKBO_00050 52636 5 Skin 0.42 protein_coding synonymous_variant LOW 675T>C Gly225Gly
M0003906 HHNEDKBO_00050 52756 5 Skin 0.42 protein_coding synonymous_variant LOW 795A>C Pro265Pro
M0003907 HHNEDKBO_00050 52782 5 Skin 0.42 protein_coding missense_variant MODERATE 821A>T Gln274Leu
M0003908 HHNEDKBO_00050 52825 4 Skin 0.33 protein_coding synonymous_variant LOW 864C>T His288His
M0003909 HHNEDKBO_00050 52852 5 Skin 0.42 protein_coding synonymous_variant LOW 891T>C Leu297Leu
M0003910 HHNEDKBO_00050 52903 4 Skin 0.33 protein_coding synonymous_variant LOW 942G>A Glu314Glu
M0003911 HHNEDKBO_00050 52931 4 Skin 0.33 protein_coding missense_variant MODERATE 970G>A Ala324Thr
M0003912 HHNEDKBO_00050 52940 4 Skin 0.33 protein_coding missense_variant MODERATE 979G>A Ala327Thr
M0003913 HHNEDKBO_00051 53126 5 Skin 0.42 protein_coding missense_variant MODERATE 130A>G Thr44Ala
M0003914 HHNEDKBO_00051 53242 5 Skin 0.42 protein_coding synonymous_variant LOW 246A>G Gln82Gln
M0003915 HHNEDKBO_00051 53246 5 Skin 0.42 protein_coding missense_variant MODERATE 250G>C Val84Leu
M0003916 HHNEDKBO_00051 53266 4 Skin 0.33 protein_coding synonymous_variant LOW 270C>G Gly90Gly
M0003917 HHNEDKBO_00051 53386 4 Skin 0.33 protein_coding synonymous_variant LOW 390G>A Ala130Ala
M0003918 HHNEDKBO_00051 53491 5 Skin 0.42 protein_coding synonymous_variant LOW 495C>G Gly165Gly
M0003919 HHNEDKBO_00051 53644 3 Skin 0.25 protein_coding synonymous_variant LOW 648A>G Glu216Glu
M0003920 HHNEDKBO_00051 53660 5 Skin 0.42 protein_coding missense_variant MODERATE 664A>G Thr222Ala
M0003921 HHNEDKBO_00051 53680 5 Skin 0.42 protein_coding synonymous_variant LOW 684C>G Pro228Pro
M0003922 HHNEDKBO_00051 53926 3 Skin 0.25 protein_coding synonymous_variant LOW 930G>C Pro310Pro
M0003923 HHNEDKBO_00051 54289 4 Skin 0.33 protein_coding synonymous_variant LOW 1293C>T Ile431Ile
M0003924 HHNEDKBO_00051 54292 4 Skin 0.33 protein_coding synonymous_variant LOW 1296G>C Pro432Pro
M0003925 HHNEDKBO_00052 55051 3 Skin 0.25 protein_coding synonymous_variant LOW 681C>G Val227Val
M0003926 HHNEDKBO_00052 55454 3 Skin 0.25 protein_coding missense_variant MODERATE 1084A>C Lys362Gln
M0003927 HHNEDKBO_00052 55555 5 Skin 0.42 protein_coding synonymous_variant LOW 1185G>C Val395Val
M0003928 HHNEDKBO_00045 46662 4 Skin 0.33 protein_coding synonymous_variant LOW 1176C>G Pro392Pro
M0003929 HHNEDKBO_00045 46803 5 Skin 0.42 protein_coding synonymous_variant LOW 1035T>G Leu345Leu
M0003930 HHNEDKBO_00045 46809 5 Skin 0.42 protein_coding synonymous_variant LOW 1029G>C Val343Val
M0003931 HHNEDKBO_00045 46811 5 Skin 0.42 protein_coding missense_variant MODERATE 1027G>A Val343Met
M0003932 HHNEDKBO_00045 46815 5 Skin 0.42 protein_coding synonymous_variant LOW 1023T>G Leu341Leu
M0003933 HHNEDKBO_00045 46821 4 Skin 0.33 protein_coding synonymous_variant LOW 1017G>C Ser339Ser
M0003934 HHNEDKBO_00045 46824 4 Skin 0.33 protein_coding synonymous_variant LOW 1014C>T Asn338Asn
M0003935 HHNEDKBO_00045 46905 4 Skin 0.33 protein_coding synonymous_variant LOW 933C>T His311His
M0003936 HHNEDKBO_00045 47025 5 Skin 0.42 protein_coding synonymous_variant LOW 813C>G Ala271Ala
M0003937 HHNEDKBO_00045 47160 4 Skin 0.33 protein_coding missense_variant MODERATE 678T>G Asp226Glu
M0003938 HHNEDKBO_00045 47661 4 Skin 0.33 protein_coding missense_variant MODERATE 177T>G His59Gln
M0003939 HHNEDKBO_00043 48733 5 Skin 0.42 protein_coding upstream_gene_variant MODIFIER -3447A>C None
M0003940 HHNEDKBO_00043 48750 5 Skin 0.42 protein_coding upstream_gene_variant MODIFIER -3464G>A None
M0003941 HHNEDKBO_00043 48763 5 Skin 0.42 protein_coding upstream_gene_variant MODIFIER -3477C>T None
M0003942 HHNEDKBO_00043 48765 5 Skin 0.42 protein_coding upstream_gene_variant MODIFIER -3479T>G None
M0003943 HHNEDKBO_00043 48869 5 Skin 0.42 protein_coding upstream_gene_variant MODIFIER -3583G>A None
M0003944 HHNEDKBO_00047 48957 5 Skin 0.42 protein_coding synonymous_variant LOW 69T>C Gly23Gly
M0003945 HHNEDKBO_00047 49254 4 Skin 0.33 protein_coding synonymous_variant LOW 366C>G Thr122Thr
M0003946 HHNEDKBO_00047 49278 5 Skin 0.42 protein_coding synonymous_variant LOW 390T>C His130His
M0003947 HHNEDKBO_00047 49293 5 Skin 0.42 protein_coding synonymous_variant LOW 405C>T His135His
M0003948 HHNEDKBO_00047 49296 4 Skin 0.33 protein_coding synonymous_variant LOW 408C>T Pro136Pro
M0003949 HHNEDKBO_00047 49305 4 Skin 0.33 protein_coding synonymous_variant LOW 417G>A Pro139Pro
M0003950 HHNEDKBO_00047 49332 4 Skin 0.33 protein_coding synonymous_variant LOW 444C>G Ala148Ala
M0003951 HHNEDKBO_00047 49665 5 Skin 0.42 protein_coding synonymous_variant LOW 777C>G Pro259Pro
M0003952 HHNEDKBO_00047 49807 5 Skin 0.42 protein_coding missense_variant MODERATE 919A>G Thr307Ala
M0003953 HHNEDKBO_00047 49842 5 Skin 0.42 protein_coding synonymous_variant LOW 954A>G Gln318Gln
M0003954 HHNEDKBO_00043 49875 5 Skin 0.42 protein_coding upstream_gene_variant MODIFIER -4589A>G None
M0003955 HHNEDKBO_00043 49897 5 Skin 0.42 protein_coding upstream_gene_variant MODIFIER -4611T>C None
M0003956 HHNEDKBO_00048 50132 5 Skin 0.42 protein_coding missense_variant MODERATE 221G>A Gly74Asp
M0003957 HHNEDKBO_00048 50763 5 Skin 0.42 protein_coding synonymous_variant LOW 852T>C Asp284Asp
M0003958 HHNEDKBO_00049 51073 3 Skin 0.25 protein_coding synonymous_variant LOW 192C>A Pro64Pro
M0003959 HHNEDKBO_00049 51097 4 Skin 0.33 protein_coding synonymous_variant LOW 216A>G Ala72Ala
M0003960 HHNEDKBO_00050 52204 3 Skin 0.25 protein_coding synonymous_variant LOW 243C>T Phe81Phe
M0003961 HHNEDKBO_00050 52240 3 Skin 0.25 protein_coding synonymous_variant LOW 279A>C Gly93Gly
M0003962 HHNEDKBO_00050 52242 3 Skin 0.25 protein_coding missense_variant MODERATE 281C>T Ala94Val
M0003963 HHNEDKBO_00050 52270 3 Skin 0.25 protein_coding synonymous_variant LOW 309C>G Leu103Leu
M0003964 HHNEDKBO_00050 52297 3 Skin 0.25 protein_coding synonymous_variant LOW 336C>T Phe112Phe
M0003965 HHNEDKBO_00050 52723 3 Skin 0.25 protein_coding synonymous_variant LOW 762G>A Ala254Ala
M0003966 HHNEDKBO_00051 53677 4 Skin 0.33 protein_coding synonymous_variant LOW 681C>T Phe227Phe
M0003967 HHNEDKBO_00051 54256 3 Skin 0.25 protein_coding synonymous_variant LOW 1260C>G Ala420Ala
M0003968 HHNEDKBO_00052 55189 3 Skin 0.25 protein_coding synonymous_variant LOW 819C>T Gly273Gly
M0003969 HHNEDKBO_00047 49467 3 Skin 0.25 protein_coding synonymous_variant LOW 579C>A Ile193Ile
M0003970 HHNEDKBO_00047 49524 4 Skin 0.33 protein_coding synonymous_variant LOW 636C>T Tyr212Tyr
M0003971 HHNEDKBO_00047 49623 3 Skin 0.25 protein_coding synonymous_variant LOW 735G>A Val245Val
M0003972 HHNEDKBO_00044 50862 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4389C>T None
M0003973 HHNEDKBO_00051 53212 3 Skin 0.25 protein_coding synonymous_variant LOW 216G>A Gln72Gln
M0003974 HHNEDKBO_00045 47310 3 Skin 0.25 protein_coding synonymous_variant LOW 528G>A Ser176Ser
M0003975 HHNEDKBO_00048 50573 3 Skin 0.25 protein_coding missense_variant MODERATE 662G>A Arg221Lys
M0003976 HHNEDKBO_00014 17256 3 Skin 0.25 protein_coding synonymous_variant LOW 39G>A Pro13Pro
M0003977 HHNEDKBO_00014 17265 3 Skin 0.25 protein_coding synonymous_variant LOW 48T>C Pro16Pro
M0003978 HHNEDKBO_00014 17274 3 Skin 0.25 protein_coding synonymous_variant LOW 57C>T Ile19Ile
M0003979 HHNEDKBO_00014 17286 3 Skin 0.25 protein_coding synonymous_variant LOW 69T>C His23His
M0003980 HHNEDKBO_00014 17292 3 Skin 0.25 protein_coding synonymous_variant LOW 75A>C Gly25Gly
M0003981 HHNEDKBO_00014 17295 3 Skin 0.25 protein_coding synonymous_variant LOW 78A>G Val26Val
M0003982 HHNEDKBO_00014 17298 3 Skin 0.25 protein_coding synonymous_variant LOW 81G>C Leu27Leu
M0003983 HHNEDKBO_00014 17301 3 Skin 0.25 protein_coding synonymous_variant LOW 84T>C Phe28Phe
M0003984 HHNEDKBO_00014 17304 3 Skin 0.25 protein_coding synonymous_variant LOW 87G>C Leu29Leu
M0003985 HHNEDKBO_00014 17307 3 Skin 0.25 protein_coding synonymous_variant LOW 90C>T Asp30Asp
M0003986 HHNEDKBO_00014 17313 3 Skin 0.25 protein_coding synonymous_variant LOW 96C>T Phe32Phe
M0003987 HHNEDKBO_00014 17325 3 Skin 0.25 protein_coding synonymous_variant LOW 108A>G Ala36Ala
M0003988 HHNEDKBO_00014 17331 3 Skin 0.25 protein_coding synonymous_variant LOW 114C>T Ser38Ser
M0003989 HHNEDKBO_00014 17364 3 Skin 0.25 protein_coding synonymous_variant LOW 147C>A Thr49Thr
M0003990 HHNEDKBO_00017 20290 3 Skin 0.25 protein_coding synonymous_variant LOW 378T>C Thr126Thr
M0003991 HHNEDKBO_00017 20368 3 Skin 0.25 protein_coding synonymous_variant LOW 300T>C Ala100Ala
M0003992 HHNEDKBO_00017 20446 3 Skin 0.25 protein_coding synonymous_variant LOW 222T>C His74His
M0003993 HHNEDKBO_00017 20530 3 Skin 0.25 protein_coding synonymous_variant LOW 138G>A Gln46Gln
M0003994 HHNEDKBO_00012 20681 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4290T>C None
M0003995 HHNEDKBO_00012 20685 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4294G>A None
M0003996 HHNEDKBO_00012 20746 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4355G>A None
M0003997 HHNEDKBO_00018 20750 3 Skin 0.25 protein_coding start_lost HIGH 2T>G Met1?
M0003998 HHNEDKBO_00018 21256 3 Skin 0.25 protein_coding missense_variant MODERATE 508T>C Cys170Arg
M0003999 HHNEDKBO_00018 21502 3 Skin 0.25 protein_coding synonymous_variant LOW 754T>C Leu252Leu
M0004000 HHNEDKBO_00018 21522 3 Skin 0.25 protein_coding synonymous_variant LOW 774T>C Tyr258Tyr
M0004001 HHNEDKBO_00018 21672 3 Skin 0.25 protein_coding synonymous_variant LOW 924A>G Val308Val
M0004002 HHNEDKBO_00018 21837 3 Skin 0.25 protein_coding synonymous_variant LOW 1089G>A Gly363Gly
M0004003 HHNEDKBO_00018 21957 3 Skin 0.25 protein_coding synonymous_variant LOW 1209C>G Arg403Arg
M0004004 HHNEDKBO_00019 22042 3 Skin 0.25 protein_coding synonymous_variant LOW 36T>G Leu12Leu
M0004005 HHNEDKBO_00019 22046 3 Skin 0.25 protein_coding missense_variant MODERATE 40G>A Val14Met
M0004006 HHNEDKBO_00019 22081 3 Skin 0.25 protein_coding synonymous_variant LOW 75A>C Gly25Gly
M0004007 HHNEDKBO_00019 22117 3 Skin 0.25 protein_coding missense_variant MODERATE 111T>G Asp37Glu
M0004008 HHNEDKBO_00019 22120 3 Skin 0.25 protein_coding synonymous_variant LOW 114G>C Ala38Ala
M0004009 HHNEDKBO_00020 28898 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4587G>A None
M0004010 HHNEDKBO_00020 28904 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4593C>A None
M0004011 HHNEDKBO_00020 28910 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4599G>A None
M0004012 HHNEDKBO_00020 28932 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4621G>T None
M0004013 HHNEDKBO_00020 28934 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4623G>A None
M0004014 HHNEDKBO_00020 28936 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4625A>G None
M0004015 HHNEDKBO_00026 29026 4 Skin 0.33 protein_coding synonymous_variant LOW 87C>T Ala29Ala
M0004016 HHNEDKBO_00026 29212 4 Skin 0.33 protein_coding synonymous_variant LOW 273A>C Ala91Ala
M0004017 HHNEDKBO_00026 29218 4 Skin 0.33 protein_coding synonymous_variant LOW 279A>G Val93Val
M0004018 HHNEDKBO_00027 29275 4 Skin 0.33 protein_coding missense_variant MODERATE 13A>G Thr5Ala
M0004019 HHNEDKBO_00027 29287 4 Skin 0.33 protein_coding missense_variant MODERATE 25C>A Pro9Thr
M0004020 HHNEDKBO_00027 29343 4 Skin 0.33 protein_coding synonymous_variant LOW 81G>A Ala27Ala
M0004021 HHNEDKBO_00027 29485 3 Skin 0.25 protein_coding missense_variant MODERATE 223C>T His75Tyr
M0004022 HHNEDKBO_00027 29979 4 Skin 0.33 protein_coding synonymous_variant LOW 717G>C Thr239Thr
M0004023 HHNEDKBO_00027 30008 4 Skin 0.33 protein_coding missense_variant MODERATE 746G>A Ser249Asn
M0004024 HHNEDKBO_00027 30009 4 Skin 0.33 protein_coding synonymous_variant LOW 747C>T Ser249Ser
M0004025 HHNEDKBO_00027 30019 3 Skin 0.25 protein_coding missense_variant MODERATE 757A>G Thr253Ala
M0004026 HHNEDKBO_00027 30291 3 Skin 0.25 protein_coding synonymous_variant LOW 1029G>C Leu343Leu
M0004027 HHNEDKBO_00027 30292 3 Skin 0.25 protein_coding missense_variant MODERATE 1030C>A Gln344Lys
M0004028 HHNEDKBO_00027 30531 4 Skin 0.33 protein_coding synonymous_variant LOW 1269T>C Ile423Ile
M0004029 HHNEDKBO_00027 30942 4 Skin 0.33 protein_coding synonymous_variant LOW 1680T>G Thr560Thr
M0004030 HHNEDKBO_00023 31271 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4184C>G None
M0004031 HHNEDKBO_00023 31278 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4191G>A None
M0004032 HHNEDKBO_00029 31298 3 Skin 0.25 protein_coding synonymous_variant LOW 780C>A Gly260Gly
M0004033 HHNEDKBO_00029 31322 3 Skin 0.25 protein_coding synonymous_variant LOW 756T>C Gly252Gly
M0004034 HHNEDKBO_00029 31385 4 Skin 0.33 protein_coding synonymous_variant LOW 693A>G Gln231Gln
M0004035 HHNEDKBO_00029 31523 3 Skin 0.25 protein_coding synonymous_variant LOW 555G>A Glu185Glu
M0004036 HHNEDKBO_00029 31556 4 Skin 0.33 protein_coding synonymous_variant LOW 522C>G Gly174Gly
M0004037 HHNEDKBO_00029 31570 4 Skin 0.33 protein_coding missense_variant MODERATE 508G>T Ala170Ser
M0004038 HHNEDKBO_00029 31571 4 Skin 0.33 protein_coding synonymous_variant LOW 507G>A Ala169Ala
M0004039 HHNEDKBO_00029 31586 4 Skin 0.33 protein_coding synonymous_variant LOW 492T>C Gly164Gly
M0004040 HHNEDKBO_00029 31589 4 Skin 0.33 protein_coding synonymous_variant LOW 489C>G Pro163Pro
M0004041 HHNEDKBO_00029 31640 4 Skin 0.33 protein_coding synonymous_variant LOW 438C>T Asp146Asp
M0004042 HHNEDKBO_00029 31690 4 Skin 0.33 protein_coding synonymous_variant LOW 388T>C Leu130Leu
M0004043 HHNEDKBO_00029 31705 4 Skin 0.33 protein_coding synonymous_variant LOW 373C>T Leu125Leu
M0004044 HHNEDKBO_00029 31706 4 Skin 0.33 protein_coding synonymous_variant LOW 372G>A Glu124Glu
M0004045 HHNEDKBO_00029 31709 4 Skin 0.33 protein_coding synonymous_variant LOW 369C>T Asp123Asp
M0004046 HHNEDKBO_00029 31872 4 Skin 0.33 protein_coding missense_variant MODERATE 206A>T Gln69Leu
M0004047 HHNEDKBO_00029 31927 4 Skin 0.33 protein_coding missense_variant MODERATE 151G>C Glu51Gln
M0004048 HHNEDKBO_00029 31940 4 Skin 0.33 protein_coding synonymous_variant LOW 138T>C Arg46Arg
M0004049 HHNEDKBO_00030 32260 4 Skin 0.33 protein_coding synonymous_variant LOW 90A>C Gly30Gly
M0004050 HHNEDKBO_00030 32314 3 Skin 0.25 protein_coding synonymous_variant LOW 144C>T Gly48Gly
M0004051 HHNEDKBO_00030 32380 4 Skin 0.33 protein_coding synonymous_variant LOW 210G>A Glu70Glu
M0004052 HHNEDKBO_00030 32599 4 Skin 0.33 protein_coding synonymous_variant LOW 429T>C Phe143Phe
M0004053 HHNEDKBO_00030 32602 4 Skin 0.33 protein_coding synonymous_variant LOW 432T>C Asp144Asp
M0004054 HHNEDKBO_00030 32620 3 Skin 0.25 protein_coding synonymous_variant LOW 450C>G Gly150Gly
M0004055 HHNEDKBO_00030 32623 4 Skin 0.33 protein_coding synonymous_variant LOW 453A>C Pro151Pro
M0004056 HHNEDKBO_00030 32665 3 Skin 0.25 protein_coding synonymous_variant LOW 495G>T Leu165Leu
M0004057 HHNEDKBO_00030 32710 4 Skin 0.33 protein_coding synonymous_variant LOW 540C>G Gly180Gly
M0004058 HHNEDKBO_00030 32788 3 Skin 0.25 protein_coding synonymous_variant LOW 618C>A Gly206Gly
M0004059 HHNEDKBO_00030 32800 4 Skin 0.33 protein_coding synonymous_variant LOW 630A>G Glu210Glu
M0004060 HHNEDKBO_00030 32801 4 Skin 0.33 protein_coding missense_variant MODERATE 631A>G Lys211Glu
M0004061 HHNEDKBO_00030 32804 4 Skin 0.33 protein_coding missense_variant MODERATE 634A>G Asn212Asp
M0004062 HHNEDKBO_00030 32806 3 Skin 0.25 protein_coding synonymous_variant LOW 636C>T Asn212Asn
M0004063 HHNEDKBO_00030 32813 3 Skin 0.25 protein_coding missense_variant MODERATE 643G>C Ala215Pro
M0004064 HHNEDKBO_00030 32815 3 Skin 0.25 protein_coding synonymous_variant LOW 645A>C Ala215Ala
M0004065 HHNEDKBO_00030 32817 3 Skin 0.25 protein_coding missense_variant MODERATE 647T>G Leu216Arg
M0004066 HHNEDKBO_00030 32818 3 Skin 0.25 protein_coding synonymous_variant LOW 648C>G Leu216Leu
M0004067 HHNEDKBO_00030 32819 3 Skin 0.25 protein_coding missense_variant MODERATE 649A>T Ser217Cys
M0004068 HHNEDKBO_00030 32820 3 Skin 0.25 protein_coding missense_variant MODERATE 650G>A Ser217Asn
M0004069 HHNEDKBO_00030 32827 3 Skin 0.25 protein_coding synonymous_variant LOW 657C>G Pro219Pro
M0004070 HHNEDKBO_00030 32857 3 Skin 0.25 protein_coding synonymous_variant LOW 687C>G Ala229Ala
M0004071 HHNEDKBO_00030 32870 3 Skin 0.25 protein_coding missense_variant MODERATE 700T>G Ser234Ala
M0004072 HHNEDKBO_00030 32893 3 Skin 0.25 protein_coding synonymous_variant LOW 723C>G Gly241Gly
M0004073 HHNEDKBO_00030 32935 3 Skin 0.25 protein_coding synonymous_variant LOW 765T>C Asp255Asp
M0004074 HHNEDKBO_00030 32938 4 Skin 0.33 protein_coding synonymous_variant LOW 768C>A Ala256Ala
M0004075 HHNEDKBO_00030 32944 4 Skin 0.33 protein_coding synonymous_variant LOW 774G>A Glu258Glu
M0004076 HHNEDKBO_00030 32948 4 Skin 0.33 protein_coding missense_variant MODERATE 778A>G Ile260Val
M0004077 HHNEDKBO_00030 32957 4 Skin 0.33 protein_coding synonymous_variant LOW 787T>C Leu263Leu
M0004078 HHNEDKBO_00030 32996 4 Skin 0.33 protein_coding missense_variant MODERATE 826A>G Ile276Val
M0004079 HHNEDKBO_00029 33261 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -1184A>G None
M0004080 HHNEDKBO_00031 33745 3 Skin 0.25 protein_coding synonymous_variant LOW 378G>C Ala126Ala
M0004081 HHNEDKBO_00031 33796 3 Skin 0.25 protein_coding synonymous_variant LOW 429C>T Gly143Gly
M0004082 HHNEDKBO_00031 34132 4 Skin 0.33 protein_coding synonymous_variant LOW 765C>T Val255Val
M0004083 HHNEDKBO_00029 34143 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -2066C>T None
M0004084 HHNEDKBO_00032 34290 4 Skin 0.33 protein_coding synonymous_variant LOW 105T>C Gly35Gly
M0004085 HHNEDKBO_00032 34449 4 Skin 0.33 protein_coding synonymous_variant LOW 264T>C Ser88Ser
M0004086 HHNEDKBO_00032 34851 4 Skin 0.33 protein_coding synonymous_variant LOW 666A>G Ser222Ser
M0004087 HHNEDKBO_00029 31745 3 Skin 0.25 protein_coding synonymous_variant LOW 333C>T Asn111Asn
M0004088 HHNEDKBO_00030 32455 3 Skin 0.25 protein_coding synonymous_variant LOW 285G>A Gln95Gln
M0004089 HHNEDKBO_00030 32482 3 Skin 0.25 protein_coding synonymous_variant LOW 312G>C Thr104Thr
M0004090 HHNEDKBO_00030 32572 3 Skin 0.25 protein_coding synonymous_variant LOW 402C>T Arg134Arg
M0004091 HHNEDKBO_00029 33119 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -1042G>A None
M0004092 HHNEDKBO_00031 33712 3 Skin 0.25 protein_coding synonymous_variant LOW 345C>T Thr115Thr
M0004093 HHNEDKBO_00033 35141 3 Skin 0.25 protein_coding synonymous_variant LOW 16C>T Leu6Leu
M0004094 HHNEDKBO_00033 35147 3 Skin 0.25 protein_coding missense_variant MODERATE 22A>G Asn8Asp
M0004095 HHNEDKBO_00033 35155 3 Skin 0.25 protein_coding synonymous_variant LOW 30C>G Thr10Thr
M0004096 HHNEDKBO_00033 35236 3 Skin 0.25 protein_coding synonymous_variant LOW 111C>G Arg37Arg
M0004097 HHNEDKBO_00033 35299 3 Skin 0.25 protein_coding synonymous_variant LOW 174T>G Leu58Leu
M0004098 HHNEDKBO_00033 35365 3 Skin 0.25 protein_coding missense_variant MODERATE 240T>G Asp80Glu
M0004099 HHNEDKBO_00033 35413 3 Skin 0.25 protein_coding synonymous_variant LOW 288C>G Ala96Ala
M0004100 HHNEDKBO_00034 36028 3 Skin 0.25 protein_coding synonymous_variant LOW 264T>C Asp88Asp
M0004101 HHNEDKBO_00034 36037 3 Skin 0.25 protein_coding synonymous_variant LOW 255T>A Ile85Ile
M0004102 HHNEDKBO_00034 36042 3 Skin 0.25 protein_coding missense_variant MODERATE 250T>G Ser84Ala
M0004103 HHNEDKBO_00034 36045 3 Skin 0.25 protein_coding missense_variant MODERATE 247A>G Lys83Glu
M0004104 HHNEDKBO_00034 36049 3 Skin 0.25 protein_coding synonymous_variant LOW 243A>G Ala81Ala
M0004105 HHNEDKBO_00034 36052 3 Skin 0.25 protein_coding missense_variant MODERATE 240G>C Met80Ile
M0004106 HHNEDKBO_00034 36055 3 Skin 0.25 protein_coding synonymous_variant LOW 237C>T Asp79Asp
M0004107 HHNEDKBO_00034 36151 3 Skin 0.25 protein_coding synonymous_variant LOW 141G>C Gly47Gly
M0004108 HHNEDKBO_00035 36561 3 Skin 0.25 protein_coding synonymous_variant LOW 55A>C Arg19Arg
M0004109 HHNEDKBO_00029 36634 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4557T>C None
M0004110 HHNEDKBO_00029 36635 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4558A>G None
M0004111 HHNEDKBO_00029 36636 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4559A>G None
M0004112 HHNEDKBO_00029 36656 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4579A>G None
M0004113 HHNEDKBO_00029 36668 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4591G>T None
M0004114 HHNEDKBO_00036 36793 3 Skin 0.25 protein_coding synonymous_variant LOW 1128C>T Ala376Ala
M0004115 HHNEDKBO_00036 36796 3 Skin 0.25 protein_coding synonymous_variant LOW 1125G>C Ala375Ala
M0004116 HHNEDKBO_00036 36805 3 Skin 0.25 protein_coding synonymous_variant LOW 1116G>A Glu372Glu
M0004117 HHNEDKBO_00036 36808 3 Skin 0.25 protein_coding synonymous_variant LOW 1113A>G Thr371Thr
M0004118 HHNEDKBO_00036 36829 3 Skin 0.25 protein_coding missense_variant MODERATE 1092T>G Asp364Glu
M0004119 HHNEDKBO_00036 36994 3 Skin 0.25 protein_coding synonymous_variant LOW 927G>C Pro309Pro
M0004120 HHNEDKBO_00036 37069 3 Skin 0.25 protein_coding synonymous_variant LOW 852G>C Pro284Pro
M0004121 HHNEDKBO_00036 37237 3 Skin 0.25 protein_coding synonymous_variant LOW 684T>C Asp228Asp
M0004122 HHNEDKBO_00036 37246 3 Skin 0.25 protein_coding synonymous_variant LOW 675A>G Glu225Glu
M0004123 HHNEDKBO_00036 37255 3 Skin 0.25 protein_coding synonymous_variant LOW 666A>C Ala222Ala
M0004124 HHNEDKBO_00037 38395 3 Skin 0.25 protein_coding synonymous_variant LOW 411G>T Ser137Ser
M0004125 HHNEDKBO_00037 38500 3 Skin 0.25 protein_coding synonymous_variant LOW 306C>T Tyr102Tyr
M0004126 HHNEDKBO_00037 38596 3 Skin 0.25 protein_coding synonymous_variant LOW 210C>T Pro70Pro
M0004127 HHNEDKBO_00037 38604 3 Skin 0.25 protein_coding missense_variant MODERATE 202A>C Ser68Arg
M0004128 HHNEDKBO_00037 38605 3 Skin 0.25 protein_coding synonymous_variant LOW 201C>G Gly67Gly
M0004129 HHNEDKBO_00037 38608 3 Skin 0.25 protein_coding synonymous_variant LOW 198T>C Ala66Ala
M0004130 HHNEDKBO_00037 38619 3 Skin 0.25 protein_coding missense_variant MODERATE 187A>C Lys63Gln
M0004131 HHNEDKBO_00037 38620 3 Skin 0.25 protein_coding synonymous_variant LOW 186C>G Gly62Gly
M0004132 HHNEDKBO_00037 38623 3 Skin 0.25 protein_coding synonymous_variant LOW 183T>C Asn61Asn
M0004133 HHNEDKBO_00038 39026 3 Skin 0.25 protein_coding synonymous_variant LOW 531T>C Ala177Ala
M0004134 HHNEDKBO_00038 39119 3 Skin 0.25 protein_coding synonymous_variant LOW 438T>C Ile146Ile
M0004135 HHNEDKBO_00038 39134 3 Skin 0.25 protein_coding synonymous_variant LOW 423C>T His141His
M0004136 HHNEDKBO_00038 39353 3 Skin 0.25 protein_coding synonymous_variant LOW 204T>G Leu68Leu
M0004137 HHNEDKBO_00038 39443 3 Skin 0.25 protein_coding synonymous_variant LOW 114G>C Ala38Ala
M0004138 HHNEDKBO_00039 39612 3 Skin 0.25 protein_coding synonymous_variant LOW 906A>G Val302Val
M0004139 HHNEDKBO_00039 39834 3 Skin 0.25 protein_coding synonymous_variant LOW 684G>C Ala228Ala
M0004140 HHNEDKBO_00039 39837 3 Skin 0.25 protein_coding synonymous_variant LOW 681T>C Tyr227Tyr
M0004141 HHNEDKBO_00039 40065 3 Skin 0.25 protein_coding synonymous_variant LOW 453T>C Gly151Gly
M0004142 HHNEDKBO_00040 40638 3 Skin 0.25 protein_coding synonymous_variant LOW 744C>T Phe248Phe
M0004143 HHNEDKBO_00040 40995 3 Skin 0.25 protein_coding synonymous_variant LOW 387C>G Val129Val
M0004144 HHNEDKBO_00040 41007 3 Skin 0.25 protein_coding synonymous_variant LOW 375T>C Tyr125Tyr
M0004145 HHNEDKBO_00040 41055 3 Skin 0.25 protein_coding synonymous_variant LOW 327C>A Gly109Gly
M0004146 HHNEDKBO_00040 41058 3 Skin 0.25 protein_coding synonymous_variant LOW 324G>C Ala108Ala
M0004147 HHNEDKBO_00040 41061 3 Skin 0.25 protein_coding synonymous_variant LOW 321A>G Glu107Glu
M0004148 HHNEDKBO_00040 41067 3 Skin 0.25 protein_coding synonymous_variant LOW 315T>C Phe105Phe
M0004149 HHNEDKBO_00040 41079 3 Skin 0.25 protein_coding synonymous_variant LOW 303C>G Gly101Gly






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term