Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1528
  Reference Plasmid   1111525849478674_bin.7__k141_222406
  Reference Plasmid Size   39967
  Reference Plasmid GC Content   0.68
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0005251 DHNKNJGH_00003 2113 3 Skin 0.15 protein_coding synonymous_variant LOW 1002C>G Val334Val
M0005252 DHNKNJGH_00003 2401 3 Skin 0.15 protein_coding synonymous_variant LOW 714A>G Thr238Thr
M0005253 DHNKNJGH_00003 2668 4 Skin 0.20 protein_coding synonymous_variant LOW 447A>C Ala149Ala
M0005254 DHNKNJGH_00003 2671 4 Skin 0.20 protein_coding synonymous_variant LOW 444T>C Tyr148Tyr
M0005255 DHNKNJGH_00003 2722 7 Skin 0.35 protein_coding synonymous_variant LOW 393A>G Gly131Gly
M0005256 DHNKNJGH_00003 2773 3 Skin 0.15 protein_coding synonymous_variant LOW 342G>C Leu114Leu
M0005257 DHNKNJGH_00003 2779 7 Skin 0.35 protein_coding synonymous_variant LOW 336A>C Ala112Ala
M0005258 DHNKNJGH_00004 3458 6 Skin 0.30 protein_coding synonymous_variant LOW 561A>G Thr187Thr
M0005259 DHNKNJGH_00004 3461 6 Skin 0.30 protein_coding synonymous_variant LOW 558G>A Glu186Glu
M0005260 DHNKNJGH_00004 3521 4 Skin 0.20 protein_coding synonymous_variant LOW 498C>T Thr166Thr
M0005261 DHNKNJGH_00004 3539 4 Skin 0.20 protein_coding synonymous_variant LOW 480C>T Arg160Arg
M0005262 DHNKNJGH_00004 3601 5 Skin 0.25 protein_coding missense_variant MODERATE 418A>C Lys140Gln
M0005263 DHNKNJGH_00025 28984 3 Skin 0.15 protein_coding synonymous_variant LOW 27C>A Ala9Ala
M0005264 DHNKNJGH_00025 29110 4 Skin 0.20 protein_coding synonymous_variant LOW 153A>G Ala51Ala
M0005265 DHNKNJGH_00025 29182 5 Skin 0.25 protein_coding synonymous_variant LOW 225C>A Gly75Gly
M0005266 DHNKNJGH_00025 29234 5 Skin 0.25 protein_coding synonymous_variant LOW 277T>C Leu93Leu
M0005267 DHNKNJGH_00025 29357 4 Skin 0.20 protein_coding missense_variant MODERATE 400A>C Asn134His
M0005268 DHNKNJGH_00025 29407 5 Skin 0.25 protein_coding synonymous_variant LOW 450C>G Arg150Arg
M0005269 DHNKNJGH_00025 29440 4 Skin 0.20 protein_coding synonymous_variant LOW 483T>C Asn161Asn
M0005270 DHNKNJGH_00025 29500 5 Skin 0.25 protein_coding synonymous_variant LOW 543A>G Glu181Glu
M0005271 DHNKNJGH_00025 29542 5 Skin 0.25 protein_coding synonymous_variant LOW 585T>G Thr195Thr
M0005272 DHNKNJGH_00025 29545 4 Skin 0.20 protein_coding synonymous_variant LOW 588T>C Asp196Asp
M0005273 DHNKNJGH_00025 29734 5 Skin 0.25 protein_coding synonymous_variant LOW 777G>A Ala259Ala
M0005274 DHNKNJGH_00025 29741 5 Skin 0.25 protein_coding missense_variant MODERATE 784T>G Ser262Ala
M0005275 DHNKNJGH_00025 29750 4 Skin 0.20 protein_coding synonymous_variant LOW 793A>C Arg265Arg
M0005276 DHNKNJGH_00025 29752 4 Skin 0.20 protein_coding missense_variant MODERATE 795G>C Arg265Ser
M0005277 DHNKNJGH_00025 29854 4 Skin 0.20 protein_coding synonymous_variant LOW 897A>G Ser299Ser
M0005278 DHNKNJGH_00025 29857 4 Skin 0.20 protein_coding synonymous_variant LOW 900C>G Pro300Pro
M0005279 DHNKNJGH_00025 29878 5 Skin 0.25 protein_coding synonymous_variant LOW 921T>C Ile307Ile
M0005280 DHNKNJGH_00025 29880 3 Skin 0.15 protein_coding missense_variant MODERATE 923G>T Arg308Leu
M0005281 DHNKNJGH_00025 29899 5 Skin 0.25 protein_coding synonymous_variant LOW 942T>C Phe314Phe
M0005282 DHNKNJGH_00025 29911 5 Skin 0.25 protein_coding synonymous_variant LOW 954G>C Val318Val
M0005283 DHNKNJGH_00025 29917 5 Skin 0.25 protein_coding synonymous_variant LOW 960T>C Asp320Asp
M0005284 DHNKNJGH_00026 30240 5 Skin 0.25 protein_coding synonymous_variant LOW 198G>A Pro66Pro
M0005285 DHNKNJGH_00026 30264 5 Skin 0.25 protein_coding synonymous_variant LOW 222C>T Leu74Leu
M0005286 DHNKNJGH_00026 30273 5 Skin 0.25 protein_coding synonymous_variant LOW 231G>A Thr77Thr
M0005287 DHNKNJGH_00026 30280 5 Skin 0.25 protein_coding missense_variant MODERATE 238C>G Gln80Glu
M0005288 DHNKNJGH_00026 30281 5 Skin 0.25 protein_coding missense_variant MODERATE 239A>G Gln80Arg
M0005289 DHNKNJGH_00026 30282 5 Skin 0.25 protein_coding missense_variant MODERATE 240A>C Gln80His
M0005290 DHNKNJGH_00026 30306 5 Skin 0.25 protein_coding synonymous_variant LOW 264C>G Gly88Gly
M0005291 DHNKNJGH_00026 30354 4 Skin 0.20 protein_coding synonymous_variant LOW 312C>T Asp104Asp
M0005292 DHNKNJGH_00026 30453 5 Skin 0.25 protein_coding synonymous_variant LOW 411T>C Ala137Ala
M0005293 DHNKNJGH_00026 30591 3 Skin 0.15 protein_coding synonymous_variant LOW 549G>T Leu183Leu
M0005294 DHNKNJGH_00026 30606 3 Skin 0.15 protein_coding synonymous_variant LOW 564A>G Ala188Ala
M0005295 DHNKNJGH_00026 30609 5 Skin 0.25 protein_coding synonymous_variant LOW 567T>C Pro189Pro
M0005296 DHNKNJGH_00026 30654 5 Skin 0.25 protein_coding synonymous_variant LOW 612C>T Asp204Asp
M0005297 DHNKNJGH_00026 30657 5 Skin 0.25 protein_coding synonymous_variant LOW 615T>C Pro205Pro
M0005298 DHNKNJGH_00026 30741 4 Skin 0.20 protein_coding missense_variant MODERATE 699C>A Asp233Glu
M0005299 DHNKNJGH_00026 30885 5 Skin 0.25 protein_coding synonymous_variant LOW 843G>C Ala281Ala
M0005300 DHNKNJGH_00026 30888 5 Skin 0.25 protein_coding synonymous_variant LOW 846G>A Ala282Ala
M0005301 DHNKNJGH_00026 30898 3 Skin 0.15 protein_coding missense_variant MODERATE 856A>G Thr286Ala
M0005302 DHNKNJGH_00026 30903 5 Skin 0.25 protein_coding synonymous_variant LOW 861C>T His287His
M0005303 DHNKNJGH_00026 30976 5 Skin 0.25 protein_coding missense_variant MODERATE 934G>T Ala312Ser
M0005304 DHNKNJGH_00026 31026 5 Skin 0.25 protein_coding synonymous_variant LOW 984T>C Gly328Gly
M0005305 DHNKNJGH_00026 31041 3 Skin 0.15 protein_coding synonymous_variant LOW 999C>G Thr333Thr
M0005306 DHNKNJGH_00026 31083 3 Skin 0.15 protein_coding synonymous_variant LOW 1041C>G Gly347Gly
M0005307 DHNKNJGH_00026 31107 5 Skin 0.25 protein_coding synonymous_variant LOW 1065G>C Gly355Gly
M0005308 DHNKNJGH_00026 31134 4 Skin 0.20 protein_coding missense_variant MODERATE 1092G>C Glu364Asp
M0005309 DHNKNJGH_00026 31188 5 Skin 0.25 protein_coding synonymous_variant LOW 1146T>C Asn382Asn
M0005310 DHNKNJGH_00026 31194 3 Skin 0.15 protein_coding synonymous_variant LOW 1152G>A Gly384Gly
M0005311 DHNKNJGH_00026 31215 3 Skin 0.15 protein_coding synonymous_variant LOW 1173G>C Thr391Thr
M0005312 DHNKNJGH_00026 31216 3 Skin 0.15 protein_coding synonymous_variant LOW 1174T>C Leu392Leu
M0005313 DHNKNJGH_00026 31239 4 Skin 0.20 protein_coding synonymous_variant LOW 1197A>C Gly399Gly
M0005314 DHNKNJGH_00026 31263 5 Skin 0.25 protein_coding synonymous_variant LOW 1221T>C Asp407Asp
M0005315 DHNKNJGH_00026 31294 5 Skin 0.25 protein_coding synonymous_variant LOW 1252T>C Leu418Leu
M0005316 DHNKNJGH_00029 32848 3 Skin 0.15 protein_coding synonymous_variant LOW 825G>A Pro275Pro
M0005317 DHNKNJGH_00029 32857 9 Skin 0.45 protein_coding synonymous_variant LOW 816T>C Tyr272Tyr
M0005318 DHNKNJGH_00029 32908 9 Skin 0.45 protein_coding synonymous_variant LOW 765A>C Val255Val
M0005319 DHNKNJGH_00029 32935 9 Skin 0.45 protein_coding synonymous_variant LOW 738T>C His246His
M0005320 DHNKNJGH_00029 32962 9 Skin 0.45 protein_coding synonymous_variant LOW 711T>C Ile237Ile
M0005321 DHNKNJGH_00029 33019 9 Skin 0.45 protein_coding synonymous_variant LOW 654G>C Arg218Arg
M0005322 DHNKNJGH_00029 33025 9 Skin 0.45 protein_coding synonymous_variant LOW 648G>C Thr216Thr
M0005323 DHNKNJGH_00029 33031 9 Skin 0.45 protein_coding synonymous_variant LOW 642G>C Ala214Ala
M0005324 DHNKNJGH_00029 33033 9 Skin 0.45 protein_coding missense_variant MODERATE 640G>C Ala214Pro
M0005325 DHNKNJGH_00029 33037 9 Skin 0.45 protein_coding synonymous_variant LOW 636G>C Ser212Ser
M0005326 DHNKNJGH_00029 33040 9 Skin 0.45 protein_coding synonymous_variant LOW 633C>G Val211Val
M0005327 DHNKNJGH_00029 33043 9 Skin 0.45 protein_coding synonymous_variant LOW 630G>C Pro210Pro
M0005328 DHNKNJGH_00029 33046 9 Skin 0.45 protein_coding synonymous_variant LOW 627A>G Glu209Glu
M0005329 DHNKNJGH_00029 33049 9 Skin 0.45 protein_coding synonymous_variant LOW 624A>C Gly208Gly
M0005330 DHNKNJGH_00029 33075 9 Skin 0.45 protein_coding missense_variant MODERATE 598A>C Ile200Leu
M0005331 DHNKNJGH_00029 33112 9 Skin 0.45 protein_coding synonymous_variant LOW 561T>C His187His
M0005332 DHNKNJGH_00029 33115 9 Skin 0.45 protein_coding synonymous_variant LOW 558A>G Glu186Glu
M0005333 DHNKNJGH_00029 33127 6 Skin 0.30 protein_coding synonymous_variant LOW 546C>G Ser182Ser
M0005334 DHNKNJGH_00029 33165 9 Skin 0.45 protein_coding missense_variant MODERATE 508A>G Thr170Ala
M0005335 DHNKNJGH_00029 33202 9 Skin 0.45 protein_coding synonymous_variant LOW 471G>C Thr157Thr
M0005336 DHNKNJGH_00029 33286 9 Skin 0.45 protein_coding synonymous_variant LOW 387T>C Asp129Asp
M0005337 DHNKNJGH_00029 33298 9 Skin 0.45 protein_coding synonymous_variant LOW 375C>G Leu125Leu
M0005338 DHNKNJGH_00029 33306 9 Skin 0.45 protein_coding missense_variant MODERATE 367G>A Val123Ile
M0005339 DHNKNJGH_00029 33327 9 Skin 0.45 protein_coding missense_variant MODERATE 346G>A Ala116Thr
M0005340 DHNKNJGH_00029 33334 9 Skin 0.45 protein_coding synonymous_variant LOW 339A>G Glu113Glu
M0005341 DHNKNJGH_00029 33349 9 Skin 0.45 protein_coding synonymous_variant LOW 324A>C Ile108Ile
M0005342 DHNKNJGH_00029 33367 9 Skin 0.45 protein_coding synonymous_variant LOW 306T>C Phe102Phe
M0005343 DHNKNJGH_00029 33385 9 Skin 0.45 protein_coding synonymous_variant LOW 288T>C Ile96Ile
M0005344 DHNKNJGH_00029 33393 9 Skin 0.45 protein_coding synonymous_variant LOW 280T>C Leu94Leu
M0005345 DHNKNJGH_00029 33415 9 Skin 0.45 protein_coding synonymous_variant LOW 258C>A Arg86Arg
M0005346 DHNKNJGH_00029 33424 9 Skin 0.45 protein_coding synonymous_variant LOW 249C>G Val83Val
M0005347 DHNKNJGH_00029 33436 9 Skin 0.45 protein_coding synonymous_variant LOW 237C>G Ala79Ala
M0005348 DHNKNJGH_00029 33462 7 Skin 0.35 protein_coding missense_variant MODERATE 211G>A Ala71Thr
M0005349 DHNKNJGH_00029 33499 9 Skin 0.45 protein_coding synonymous_variant LOW 174G>C Leu58Leu
M0005350 DHNKNJGH_00029 33511 9 Skin 0.45 protein_coding synonymous_variant LOW 162C>T Arg54Arg
M0005351 DHNKNJGH_00029 33549 9 Skin 0.45 protein_coding missense_variant MODERATE 124G>A Ala42Thr
M0005352 DHNKNJGH_00029 33550 9 Skin 0.45 protein_coding synonymous_variant LOW 123A>G Glu41Glu
M0005353 DHNKNJGH_00029 33559 9 Skin 0.45 protein_coding synonymous_variant LOW 114A>G Ala38Ala
M0005354 DHNKNJGH_00029 33564 9 Skin 0.45 protein_coding missense_variant MODERATE 109A>G Ile37Val
M0005355 DHNKNJGH_00029 33574 9 Skin 0.45 protein_coding synonymous_variant LOW 99C>G Val33Val
M0005356 DHNKNJGH_00029 33586 9 Skin 0.45 protein_coding synonymous_variant LOW 87G>C Thr29Thr
M0005357 DHNKNJGH_00029 33598 9 Skin 0.45 protein_coding synonymous_variant LOW 75A>G Glu25Glu
M0005358 DHNKNJGH_00029 33624 9 Skin 0.45 protein_coding missense_variant MODERATE 49A>G Ser17Gly
M0005359 DHNKNJGH_00027 33675 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1344G>A None
M0005360 DHNKNJGH_00027 33695 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1364C>T None
M0005361 DHNKNJGH_00027 33708 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1377A>G None
M0005362 DHNKNJGH_00027 33709 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1378C>T None
M0005363 DHNKNJGH_00027 33731 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1400G>A None
M0005364 DHNKNJGH_00027 33748 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1417A>G None
M0005365 DHNKNJGH_00027 33749 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1418G>T None
M0005366 DHNKNJGH_00027 33754 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1423A>G None
M0005367 DHNKNJGH_00027 33770 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1439T>A None
M0005368 DHNKNJGH_00027 33776 9 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1445T>C None
M0005369 DHNKNJGH_00030 33799 9 Skin 0.45 protein_coding synonymous_variant LOW 6A>G Ala2Ala
M0005370 DHNKNJGH_00030 33922 9 Skin 0.45 protein_coding synonymous_variant LOW 129C>A Ile43Ile
M0005371 DHNKNJGH_00030 34150 5 Skin 0.25 protein_coding synonymous_variant LOW 357T>C Ile119Ile
M0005372 DHNKNJGH_00030 34441 9 Skin 0.45 protein_coding synonymous_variant LOW 648T>C Asn216Asn
M0005373 DHNKNJGH_00030 34525 7 Skin 0.35 protein_coding synonymous_variant LOW 732T>C Ile244Ile
M0005374 DHNKNJGH_00030 34528 7 Skin 0.35 protein_coding synonymous_variant LOW 735C>T Pro245Pro
M0005375 DHNKNJGH_00030 34558 7 Skin 0.35 protein_coding synonymous_variant LOW 765C>T Cys255Cys
M0005376 DHNKNJGH_00030 35329 9 Skin 0.45 protein_coding synonymous_variant LOW 1536T>C Tyr512Tyr
M0005377 DHNKNJGH_00030 35374 9 Skin 0.45 protein_coding synonymous_variant LOW 1581G>C Ala527Ala
M0005378 DHNKNJGH_00030 35533 8 Skin 0.40 protein_coding synonymous_variant LOW 1740T>C Asp580Asp
M0005379 DHNKNJGH_00027 35809 8 Skin 0.40 protein_coding upstream_gene_variant MODIFIER -3478T>A None
M0005380 DHNKNJGH_00031 35885 8 Skin 0.40 protein_coding synonymous_variant LOW 60C>T Arg20Arg
M0005381 DHNKNJGH_00031 35945 8 Skin 0.40 protein_coding synonymous_variant LOW 120T>C His40His
M0005382 DHNKNJGH_00031 35952 8 Skin 0.40 protein_coding missense_variant MODERATE 127G>C Glu43Gln
M0005383 DHNKNJGH_00031 35954 8 Skin 0.40 protein_coding synonymous_variant LOW 129A>G Glu43Glu
M0005384 DHNKNJGH_00031 35972 8 Skin 0.40 protein_coding synonymous_variant LOW 147G>C Val49Val
M0005385 DHNKNJGH_00031 36011 8 Skin 0.40 protein_coding synonymous_variant LOW 186T>G Pro62Pro
M0005386 DHNKNJGH_00031 36383 5 Skin 0.25 protein_coding synonymous_variant LOW 558G>A Glu186Glu
M0005387 DHNKNJGH_00031 36413 7 Skin 0.35 protein_coding synonymous_variant LOW 588C>T His196His
M0005388 DHNKNJGH_00031 36609 6 Skin 0.30 protein_coding missense_variant MODERATE 784G>A Ala262Thr
M0005389 DHNKNJGH_00027 36628 6 Skin 0.30 protein_coding upstream_gene_variant MODIFIER -4297G>A None
M0005390 DHNKNJGH_00032 36701 3 Skin 0.15 protein_coding synonymous_variant LOW 24T>C Leu8Leu
M0005391 DHNKNJGH_00032 36821 8 Skin 0.40 protein_coding synonymous_variant LOW 144T>C Ala48Ala
M0005392 DHNKNJGH_00032 36860 8 Skin 0.40 protein_coding synonymous_variant LOW 183T>C Ala61Ala
M0005393 DHNKNJGH_00032 37085 8 Skin 0.40 protein_coding synonymous_variant LOW 408A>C Ala136Ala
M0005394 DHNKNJGH_00032 37112 8 Skin 0.40 protein_coding synonymous_variant LOW 435G>C Pro145Pro
M0005395 DHNKNJGH_00032 37184 5 Skin 0.25 protein_coding synonymous_variant LOW 507C>T Asn169Asn
M0005396 DHNKNJGH_00032 37268 7 Skin 0.35 protein_coding synonymous_variant LOW 591G>A Ala197Ala
M0005397 DHNKNJGH_00032 37280 7 Skin 0.35 protein_coding synonymous_variant LOW 603T>C Gly201Gly
M0005398 DHNKNJGH_00032 37425 4 Skin 0.20 protein_coding synonymous_variant LOW 748C>T Leu250Leu
M0005399 DHNKNJGH_00032 37448 5 Skin 0.25 protein_coding synonymous_variant LOW 771C>T Gly257Gly
M0005400 DHNKNJGH_00032 37523 4 Skin 0.20 protein_coding synonymous_variant LOW 846C>T Asp282Asp
M0005401 DHNKNJGH_00032 37568 4 Skin 0.20 protein_coding synonymous_variant LOW 891G>A Glu297Glu
M0005402 DHNKNJGH_00032 37571 4 Skin 0.20 protein_coding synonymous_variant LOW 894C>G Val298Val
M0005403 DHNKNJGH_00033 37695 4 Skin 0.20 protein_coding synonymous_variant LOW 1815C>A Gly605Gly
M0005404 DHNKNJGH_00033 37701 4 Skin 0.20 protein_coding synonymous_variant LOW 1809A>G Thr603Thr
M0005405 DHNKNJGH_00033 37707 6 Skin 0.30 protein_coding synonymous_variant LOW 1803A>T Gly601Gly
M0005406 DHNKNJGH_00033 37863 4 Skin 0.20 protein_coding synonymous_variant LOW 1647G>A Glu549Glu
M0005407 DHNKNJGH_00033 38031 4 Skin 0.20 protein_coding synonymous_variant LOW 1479G>C Pro493Pro
M0005408 DHNKNJGH_00033 38040 4 Skin 0.20 protein_coding synonymous_variant LOW 1470G>C Ser490Ser
M0005409 DHNKNJGH_00033 38055 4 Skin 0.20 protein_coding synonymous_variant LOW 1455G>A Lys485Lys
M0005410 DHNKNJGH_00033 38073 4 Skin 0.20 protein_coding synonymous_variant LOW 1437C>T Asn479Asn
M0005411 DHNKNJGH_00033 38094 4 Skin 0.20 protein_coding synonymous_variant LOW 1416A>C Gly472Gly
M0005412 DHNKNJGH_00033 38097 4 Skin 0.20 protein_coding synonymous_variant LOW 1413T>C Tyr471Tyr
M0005413 DHNKNJGH_00033 38100 4 Skin 0.20 protein_coding synonymous_variant LOW 1410G>C Ala470Ala
M0005414 DHNKNJGH_00033 38112 4 Skin 0.20 protein_coding synonymous_variant LOW 1398A>C Gly466Gly
M0005415 DHNKNJGH_00033 38124 4 Skin 0.20 protein_coding synonymous_variant LOW 1386G>T Ser462Ser
M0005416 DHNKNJGH_00033 38130 4 Skin 0.20 protein_coding synonymous_variant LOW 1380T>C Asp460Asp
M0005417 DHNKNJGH_00033 38230 4 Skin 0.20 protein_coding missense_variant MODERATE 1280C>T Ala427Val
M0005418 DHNKNJGH_00033 38231 4 Skin 0.20 protein_coding missense_variant MODERATE 1279G>A Ala427Thr
M0005419 DHNKNJGH_00033 38233 4 Skin 0.20 protein_coding missense_variant MODERATE 1277A>G Lys426Arg
M0005420 DHNKNJGH_00033 38244 4 Skin 0.20 protein_coding synonymous_variant LOW 1266G>C Ser422Ser
M0005421 DHNKNJGH_00033 38343 3 Skin 0.15 protein_coding synonymous_variant LOW 1167G>T Ala389Ala
M0005422 DHNKNJGH_00033 38798 4 Skin 0.20 protein_coding missense_variant MODERATE 712A>C Ser238Arg
M0005423 DHNKNJGH_00033 39041 4 Skin 0.20 protein_coding missense_variant MODERATE 469G>C Ala157Pro
M0005424 DHNKNJGH_00003 2536 3 Skin 0.15 protein_coding synonymous_variant LOW 579C>G Thr193Thr
M0005425 DHNKNJGH_00003 2545 3 Skin 0.15 protein_coding synonymous_variant LOW 570C>G Ala190Ala
M0005426 DHNKNJGH_00003 2806 4 Skin 0.20 protein_coding synonymous_variant LOW 309G>A Lys103Lys
M0005427 DHNKNJGH_00004 3824 6 Skin 0.30 protein_coding synonymous_variant LOW 195C>T Ser65Ser
M0005428 DHNKNJGH_00004 3899 8 Skin 0.40 protein_coding synonymous_variant LOW 120A>G Glu40Glu
M0005429 DHNKNJGH_00005 4063 5 Skin 0.25 protein_coding missense_variant MODERATE 1409C>T Ala470Val
M0005430 DHNKNJGH_00005 4064 5 Skin 0.25 protein_coding missense_variant MODERATE 1408G>T Ala470Ser
M0005431 DHNKNJGH_00005 4107 5 Skin 0.25 protein_coding synonymous_variant LOW 1365C>T Gly455Gly
M0005432 DHNKNJGH_00005 4155 6 Skin 0.30 protein_coding synonymous_variant LOW 1317G>A Ala439Ala
M0005433 DHNKNJGH_00005 4340 8 Skin 0.40 protein_coding missense_variant MODERATE 1132A>G Ser378Gly
M0005434 DHNKNJGH_00005 4356 8 Skin 0.40 protein_coding synonymous_variant LOW 1116C>T Phe372Phe
M0005435 DHNKNJGH_00005 4363 8 Skin 0.40 protein_coding missense_variant MODERATE 1109A>C Glu370Ala
M0005436 DHNKNJGH_00005 4429 8 Skin 0.40 protein_coding missense_variant MODERATE 1043C>A Ala348Glu
M0005437 DHNKNJGH_00005 4443 6 Skin 0.30 protein_coding synonymous_variant LOW 1029G>A Val343Val
M0005438 DHNKNJGH_00005 4655 5 Skin 0.25 protein_coding missense_variant MODERATE 817C>A Arg273Ser
M0005439 DHNKNJGH_00005 4711 5 Skin 0.25 protein_coding missense_variant MODERATE 761T>C Val254Ala
M0005440 DHNKNJGH_00005 4851 8 Skin 0.40 protein_coding synonymous_variant LOW 621G>C Gly207Gly
M0005441 DHNKNJGH_00005 4926 8 Skin 0.40 protein_coding synonymous_variant LOW 546A>T Gly182Gly
M0005442 DHNKNJGH_00005 5363 7 Skin 0.35 protein_coding missense_variant MODERATE 109G>A Ala37Thr
M0005443 DHNKNJGH_00005 5388 8 Skin 0.40 protein_coding synonymous_variant LOW 84A>G Thr28Thr
M0005444 DHNKNJGH_00006 5630 4 Skin 0.20 protein_coding synonymous_variant LOW 753A>G Glu251Glu
M0005445 DHNKNJGH_00006 5792 6 Skin 0.30 protein_coding missense_variant MODERATE 591G>T Gln197His
M0005446 DHNKNJGH_00006 5795 6 Skin 0.30 protein_coding synonymous_variant LOW 588G>A Gly196Gly
M0005447 DHNKNJGH_00006 6089 5 Skin 0.25 protein_coding synonymous_variant LOW 294C>A Ser98Ser
M0005448 DHNKNJGH_00006 6096 5 Skin 0.25 protein_coding missense_variant MODERATE 287G>A Ser96Asn
M0005449 DHNKNJGH_00006 6164 8 Skin 0.40 protein_coding synonymous_variant LOW 219T>C Arg73Arg
M0005450 DHNKNJGH_00006 6182 4 Skin 0.20 protein_coding synonymous_variant LOW 201G>A Thr67Thr
M0005451 DHNKNJGH_00006 6321 8 Skin 0.40 protein_coding missense_variant MODERATE 62C>T Ala21Val
M0005452 DHNKNJGH_00007 6394 4 Skin 0.20 protein_coding missense_variant MODERATE 1190C>G Pro397Arg
M0005453 DHNKNJGH_00007 6525 8 Skin 0.40 protein_coding synonymous_variant LOW 1059C>G Ser353Ser
M0005454 DHNKNJGH_00007 6627 8 Skin 0.40 protein_coding synonymous_variant LOW 957T>C Tyr319Tyr
M0005455 DHNKNJGH_00007 6645 8 Skin 0.40 protein_coding synonymous_variant LOW 939A>G Ala313Ala
M0005456 DHNKNJGH_00007 6651 8 Skin 0.40 protein_coding synonymous_variant LOW 933A>C Gly311Gly
M0005457 DHNKNJGH_00007 6654 8 Skin 0.40 protein_coding synonymous_variant LOW 930G>C Ala310Ala
M0005458 DHNKNJGH_00007 6657 8 Skin 0.40 protein_coding synonymous_variant LOW 927C>T Tyr309Tyr
M0005459 DHNKNJGH_00007 6666 8 Skin 0.40 protein_coding synonymous_variant LOW 918C>A Ala306Ala
M0005460 DHNKNJGH_00007 6668 8 Skin 0.40 protein_coding missense_variant MODERATE 916G>C Ala306Pro
M0005461 DHNKNJGH_00007 6678 8 Skin 0.40 protein_coding synonymous_variant LOW 906C>G Gly302Gly
M0005462 DHNKNJGH_00007 7249 8 Skin 0.40 protein_coding missense_variant MODERATE 335C>A Pro112Gln
M0005463 DHNKNJGH_00007 7251 8 Skin 0.40 protein_coding synonymous_variant LOW 333G>A Gly111Gly
M0005464 DHNKNJGH_00007 7254 8 Skin 0.40 protein_coding synonymous_variant LOW 330A>C Gly110Gly
M0005465 DHNKNJGH_00007 7269 8 Skin 0.40 protein_coding synonymous_variant LOW 315A>C Ser105Ser
M0005466 DHNKNJGH_00007 7286 8 Skin 0.40 protein_coding missense_variant MODERATE 298C>G Leu100Val
M0005467 DHNKNJGH_00007 7294 8 Skin 0.40 protein_coding missense_variant MODERATE 290T>C Val97Ala
M0005468 DHNKNJGH_00007 7299 8 Skin 0.40 protein_coding synonymous_variant LOW 285G>C Ala95Ala
M0005469 DHNKNJGH_00007 7306 8 Skin 0.40 protein_coding missense_variant MODERATE 278C>T Ala93Val
M0005470 DHNKNJGH_00007 7307 8 Skin 0.40 protein_coding missense_variant MODERATE 277G>T Ala93Ser
M0005471 DHNKNJGH_00007 7311 8 Skin 0.40 protein_coding synonymous_variant LOW 273C>T Gly91Gly
M0005472 DHNKNJGH_00007 7326 8 Skin 0.40 protein_coding missense_variant MODERATE 258G>T Gln86His
M0005473 DHNKNJGH_00007 7327 8 Skin 0.40 protein_coding missense_variant MODERATE 257A>G Gln86Arg
M0005474 DHNKNJGH_00007 7353 8 Skin 0.40 protein_coding synonymous_variant LOW 231G>T Ser77Ser
M0005475 DHNKNJGH_00007 7356 8 Skin 0.40 protein_coding synonymous_variant LOW 228G>C Gly76Gly
M0005476 DHNKNJGH_00007 7458 4 Skin 0.20 protein_coding synonymous_variant LOW 126G>C Leu42Leu
M0005477 DHNKNJGH_00007 7536 6 Skin 0.30 protein_coding synonymous_variant LOW 48T>C Asn16Asn
M0005478 DHNKNJGH_00008 8224 6 Skin 0.30 protein_coding missense_variant MODERATE 581C>T Ala194Val
M0005479 DHNKNJGH_00004 8318 6 Skin 0.30 protein_coding upstream_gene_variant MODIFIER -4300T>C None
M0005480 DHNKNJGH_00004 3260 4 Skin 0.20 protein_coding synonymous_variant LOW 759C>G Arg253Arg
M0005481 DHNKNJGH_00005 4182 3 Skin 0.15 protein_coding synonymous_variant LOW 1290C>T Gly430Gly
M0005482 DHNKNJGH_00005 4513 3 Skin 0.15 protein_coding missense_variant MODERATE 959A>G His320Arg
M0005483 DHNKNJGH_00005 5167 3 Skin 0.15 protein_coding missense_variant MODERATE 305C>T Pro102Leu
M0005484 DHNKNJGH_00001 5473 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4600C>T None
M0005485 DHNKNJGH_00006 6113 3 Skin 0.15 protein_coding synonymous_variant LOW 270T>C Asn90Asn
M0005486 DHNKNJGH_00006 6289 3 Skin 0.15 protein_coding missense_variant MODERATE 94A>G Thr32Ala
M0005487 DHNKNJGH_00024 28686 3 Skin 0.15 protein_coding synonymous_variant LOW 894C>A Gly298Gly
M0005488 DHNKNJGH_00020 28927 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3906T>C None
M0005489 DHNKNJGH_00020 28930 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3909G>T None
M0005490 DHNKNJGH_00020 28931 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3910G>C None
M0005491 DHNKNJGH_00020 28936 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3915T>G None
M0005492 DHNKNJGH_00025 29645 3 Skin 0.15 protein_coding synonymous_variant LOW 688A>C Arg230Arg
M0005493 DHNKNJGH_00026 30480 3 Skin 0.15 protein_coding synonymous_variant LOW 438C>A Ile146Ile
M0005494 DHNKNJGH_00030 35164 3 Skin 0.15 protein_coding synonymous_variant LOW 1371G>A Glu457Glu
M0005495 DHNKNJGH_00030 35176 6 Skin 0.30 protein_coding synonymous_variant LOW 1383G>T Gly461Gly
M0005496 DHNKNJGH_00027 35585 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3254G>T None
M0005497 DHNKNJGH_00027 35623 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3292G>A None
M0005498 DHNKNJGH_00027 35696 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3365C>G None
M0005499 DHNKNJGH_00027 35761 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3430T>G None
M0005500 DHNKNJGH_00027 35777 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3446G>A None
M0005501 DHNKNJGH_00027 35780 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3449T>C None
M0005502 DHNKNJGH_00031 36512 6 Skin 0.30 protein_coding synonymous_variant LOW 687T>C Asp229Asp
M0005503 DHNKNJGH_00032 37379 6 Skin 0.30 protein_coding synonymous_variant LOW 702T>C Asp234Asp
M0005504 DHNKNJGH_00031 36497 5 Skin 0.25 protein_coding synonymous_variant LOW 672G>C Leu224Leu
M0005505 DHNKNJGH_00033 38553 3 Skin 0.15 protein_coding synonymous_variant LOW 957T>C Pro319Pro
M0005506 DHNKNJGH_00033 38574 3 Skin 0.15 protein_coding synonymous_variant LOW 936C>T Tyr312Tyr
M0005507 DHNKNJGH_00033 38577 3 Skin 0.15 protein_coding synonymous_variant LOW 933C>A Gly311Gly
M0005508 DHNKNJGH_00019 22314 3 Skin 0.15 protein_coding synonymous_variant LOW 936T>C Ala312Ala
M0005509 DHNKNJGH_00019 22524 3 Skin 0.15 protein_coding synonymous_variant LOW 726T>C Asn242Asn
M0005510 DHNKNJGH_00020 23702 3 Skin 0.15 protein_coding synonymous_variant LOW 1320C>G Ala440Ala
M0005511 DHNKNJGH_00020 24051 4 Skin 0.20 protein_coding missense_variant MODERATE 971A>G Lys324Arg
M0005512 DHNKNJGH_00020 24107 3 Skin 0.15 protein_coding synonymous_variant LOW 915G>A Glu305Glu
M0005513 DHNKNJGH_00020 24431 4 Skin 0.20 protein_coding synonymous_variant LOW 591G>C Gly197Gly
M0005514 DHNKNJGH_00020 24434 4 Skin 0.20 protein_coding synonymous_variant LOW 588G>C Pro196Pro
M0005515 DHNKNJGH_00020 24985 4 Skin 0.20 protein_coding synonymous_variant LOW 37T>C Leu13Leu
M0005516 DHNKNJGH_00021 25415 4 Skin 0.20 protein_coding synonymous_variant LOW 570T>C Tyr190Tyr
M0005517 DHNKNJGH_00021 25505 4 Skin 0.20 protein_coding synonymous_variant LOW 480T>C Gly160Gly
M0005518 DHNKNJGH_00021 25673 3 Skin 0.15 protein_coding synonymous_variant LOW 312T>C Gly104Gly
M0005519 DHNKNJGH_00022 26410 4 Skin 0.20 protein_coding synonymous_variant LOW 249G>C Arg83Arg
M0005520 DHNKNJGH_00023 26856 4 Skin 0.20 protein_coding synonymous_variant LOW 783G>A Ala261Ala
M0005521 DHNKNJGH_00023 26915 4 Skin 0.20 protein_coding missense_variant MODERATE 724G>A Val242Ile
M0005522 DHNKNJGH_00023 26928 4 Skin 0.20 protein_coding synonymous_variant LOW 711C>G Arg237Arg
M0005523 DHNKNJGH_00023 26964 4 Skin 0.20 protein_coding synonymous_variant LOW 675A>G Val225Val
M0005524 DHNKNJGH_00023 27004 4 Skin 0.20 protein_coding missense_variant MODERATE 635G>T Arg212Leu
M0005525 DHNKNJGH_00023 27015 4 Skin 0.20 protein_coding synonymous_variant LOW 624G>A Glu208Glu
M0005526 DHNKNJGH_00023 27138 4 Skin 0.20 protein_coding synonymous_variant LOW 501A>G Ala167Ala
M0005527 DHNKNJGH_00019 27651 4 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -4402A>G None
M0005528 DHNKNJGH_00019 27779 4 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -4530C>A None
M0005529 DHNKNJGH_00024 28092 3 Skin 0.15 protein_coding synonymous_variant LOW 300T>C Asp100Asp
M0005530 DHNKNJGH_00024 28118 3 Skin 0.15 protein_coding missense_variant MODERATE 326G>A Arg109His
M0005531 DHNKNJGH_00024 28158 4 Skin 0.20 protein_coding synonymous_variant LOW 366G>A Ala122Ala
M0005532 DHNKNJGH_00024 28161 4 Skin 0.20 protein_coding synonymous_variant LOW 369A>C Arg123Arg
M0005533 DHNKNJGH_00024 28200 4 Skin 0.20 protein_coding synonymous_variant LOW 408G>A Glu136Glu
M0005534 DHNKNJGH_00024 28281 3 Skin 0.15 protein_coding synonymous_variant LOW 489T>C Arg163Arg
M0005535 DHNKNJGH_00024 28308 4 Skin 0.20 protein_coding synonymous_variant LOW 516T>C Phe172Phe
M0005536 DHNKNJGH_00024 28380 4 Skin 0.20 protein_coding synonymous_variant LOW 588T>C His196His
M0005537 DHNKNJGH_00024 28428 4 Skin 0.20 protein_coding synonymous_variant LOW 636C>T Phe212Phe
M0005538 DHNKNJGH_00024 28614 3 Skin 0.15 protein_coding synonymous_variant LOW 822C>T Tyr274Tyr
M0005539 DHNKNJGH_00025 29498 3 Skin 0.15 protein_coding missense_variant MODERATE 541G>C Glu181Gln
M0005540 DHNKNJGH_00029 32902 3 Skin 0.15 protein_coding synonymous_variant LOW 771C>G Val257Val
M0005541 DHNKNJGH_00023 27065 3 Skin 0.15 protein_coding missense_variant MODERATE 574A>G Thr192Ala
M0005542 DHNKNJGH_00023 27107 3 Skin 0.15 protein_coding synonymous_variant LOW 532C>T Leu178Leu
M0005543 DHNKNJGH_00030 35278 4 Skin 0.20 protein_coding synonymous_variant LOW 1485G>A Gln495Gln
M0005544 DHNKNJGH_00005 4366 4 Skin 0.20 protein_coding missense_variant MODERATE 1106T>C Met369Thr
M0005545 DHNKNJGH_00005 4613 4 Skin 0.20 protein_coding missense_variant MODERATE 859G>A Ala287Thr
M0005546 DHNKNJGH_00005 5409 3 Skin 0.15 protein_coding synonymous_variant LOW 63G>C Ala21Ala
M0005547 DHNKNJGH_00006 6238 3 Skin 0.15 protein_coding missense_variant MODERATE 145A>G Thr49Ala
M0005548 DHNKNJGH_00003 7618 5 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4504T>C None
M0005549 DHNKNJGH_00004 8353 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4335G>A None
M0005550 DHNKNJGH_00004 8451 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4433T>A None
M0005551 DHNKNJGH_00004 8456 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4438C>T None
M0005552 DHNKNJGH_00004 8478 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4460T>C None
M0005553 DHNKNJGH_00004 8479 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4461G>A None
M0005554 DHNKNJGH_00004 8491 3 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4473C>T None
M0005555 DHNKNJGH_00007 7336 5 Skin 0.25 protein_coding missense_variant MODERATE 248G>T Gly83Val
M0005556 DHNKNJGH_00008 7826 4 Skin 0.20 protein_coding synonymous_variant LOW 183C>T Gly61Gly
M0005557 DHNKNJGH_00024 28803 3 Skin 0.15 protein_coding synonymous_variant LOW 1011G>T Leu337Leu
M0005558 DHNKNJGH_00024 28824 3 Skin 0.15 protein_coding synonymous_variant LOW 1032C>G Arg344Arg
M0005559 DHNKNJGH_00007 7383 3 Skin 0.15 protein_coding synonymous_variant LOW 201C>G Ala67Ala
M0005560 DHNKNJGH_00007 7416 3 Skin 0.15 protein_coding synonymous_variant LOW 168G>C Gly56Gly






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
DHNKNJGH_00021 QRI89263.1|CE4 100 5.38e-252 1 318 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term