Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C11
  Reference Plasmid   1111525849478719_bin.18__k141_684426
  Reference Plasmid Size   10438
  Reference Plasmid GC Content   0.56
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0006279 OPHKODNO_00002 2231 3 Skin 0.75 protein_coding missense_variant MODERATE 32A>C Asn11Thr
M0006280 OPHKODNO_00002 2300 3 Skin 0.75 protein_coding upstream_gene_variant MODIFIER -38T>C None
M0006281 OPHKODNO_00002 6532 3 Skin 0.75 protein_coding upstream_gene_variant MODIFIER -4270C>T None
M0006282 OPHKODNO_00007 6750 3 Skin 0.75 protein_coding synonymous_variant LOW 192T>C Arg64Arg
M0117423 OPHKODNO_00001 223 11 Oral 0.61 protein_coding missense_variant MODERATE 218C>T Pro73Leu
M0117424 OPHKODNO_00001 258 11 Oral 0.61 protein_coding missense_variant MODERATE 253A>G Ser85Gly
M0117425 OPHKODNO_00001 267 4 Oral 0.22 protein_coding missense_variant MODERATE 262C>T Arg88Cys
M0117426 OPHKODNO_00001 279 4 Oral 0.22 protein_coding missense_variant MODERATE 274C>T Arg92Cys
M0117427 OPHKODNO_00001 335 10 Oral 0.56 protein_coding synonymous_variant LOW 330T>C Asp110Asp
M0117428 OPHKODNO_00001 339 4 Oral 0.22 protein_coding missense_variant MODERATE 334G>A Gly112Arg
M0117429 OPHKODNO_00001 375 11 Oral 0.61 protein_coding missense_variant MODERATE 370G>T Gly124Cys
M0117430 OPHKODNO_00001 444 4 Oral 0.22 protein_coding missense_variant MODERATE 439G>A Glu147Lys
M0117431 OPHKODNO_00001 447 11 Oral 0.61 protein_coding missense_variant MODERATE 442C>T Arg148Cys
M0117432 OPHKODNO_00001 450 11 Oral 0.61 protein_coding missense_variant MODERATE 445A>G Thr149Ala
M0117433 OPHKODNO_00001 452 11 Oral 0.61 protein_coding synonymous_variant LOW 447C>T Thr149Thr
M0117434 OPHKODNO_00001 459 11 Oral 0.61 protein_coding missense_variant MODERATE 454T>C Cys152Arg
M0117435 OPHKODNO_00003 749 12 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -1861A>T None
M0117436 OPHKODNO_00003 751 12 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -1859C>A None
M0117437 OPHKODNO_00003 759 12 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -1851T>A None
M0117438 OPHKODNO_00003 770 6 Oral 0.33 protein_coding upstream_gene_variant MODIFIER -1840G>A None
M0117439 OPHKODNO_00003 781 6 Oral 0.33 protein_coding upstream_gene_variant MODIFIER -1829A>G None
M0117440 OPHKODNO_00003 788 9 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -1822T>C None
M0117441 OPHKODNO_00002 900 3 Oral 0.17 protein_coding synonymous_variant LOW 1363C>T Leu455Leu
M0117442 OPHKODNO_00002 1006 17 Oral 0.94 protein_coding synonymous_variant LOW 1257T>C Asp419Asp
M0117443 OPHKODNO_00002 1132 15 Oral 0.83 protein_coding synonymous_variant LOW 1131G>A Ala377Ala
M0117444 OPHKODNO_00002 1384 14 Oral 0.78 protein_coding synonymous_variant LOW 879C>T Ala293Ala
M0117445 OPHKODNO_00002 1396 8 Oral 0.44 protein_coding synonymous_variant LOW 867C>T Gly289Gly
M0117446 OPHKODNO_00002 1415 11 Oral 0.61 protein_coding missense_variant MODERATE 848G>C Gly283Ala
M0117447 OPHKODNO_00002 1504 15 Oral 0.83 protein_coding synonymous_variant LOW 759G>C Pro253Pro
M0117448 OPHKODNO_00002 1672 4 Oral 0.22 protein_coding synonymous_variant LOW 591C>T Gly197Gly
M0117449 OPHKODNO_00002 1678 8 Oral 0.44 protein_coding synonymous_variant LOW 585G>C Val195Val
M0117450 OPHKODNO_00002 1723 15 Oral 0.83 protein_coding synonymous_variant LOW 540T>C Arg180Arg
M0117451 OPHKODNO_00002 1759 17 Oral 0.94 protein_coding synonymous_variant LOW 504G>C Ala168Ala
M0117452 OPHKODNO_00002 1762 14 Oral 0.78 protein_coding synonymous_variant LOW 501T>C Ile167Ile
M0117453 OPHKODNO_00002 1882 14 Oral 0.78 protein_coding synonymous_variant LOW 381G>C Leu127Leu
M0117454 OPHKODNO_00002 1885 17 Oral 0.94 protein_coding synonymous_variant LOW 378T>C Gly126Gly
M0117455 OPHKODNO_00002 1989 6 Oral 0.33 protein_coding missense_variant MODERATE 274A>G Ile92Val
M0117456 OPHKODNO_00002 2158 16 Oral 0.89 protein_coding synonymous_variant LOW 105C>A Ala35Ala
M0117457 OPHKODNO_00002 2188 10 Oral 0.56 protein_coding synonymous_variant LOW 75A>G Lys25Lys
M0117458 OPHKODNO_00002 2218 5 Oral 0.28 protein_coding synonymous_variant LOW 45A>G Glu15Glu
M0117459 OPHKODNO_00002 2231 12 Oral 0.67 protein_coding missense_variant MODERATE 32A>G Asn11Ser
M0117460 OPHKODNO_00002 2300 13 Oral 0.72 protein_coding upstream_gene_variant MODIFIER -38T>C None
M0117461 OPHKODNO_00002 2312 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -50T>C None
M0117462 OPHKODNO_00002 2313 5 Oral 0.28 protein_coding upstream_gene_variant MODIFIER -51C>T None
M0117463 OPHKODNO_00002 2415 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -153G>A None
M0117464 OPHKODNO_00002 2433 4 Oral 0.22 protein_coding upstream_gene_variant MODIFIER -171T>C None
M0117465 OPHKODNO_00002 2440 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -178C>T None
M0117466 OPHKODNO_00002 2442 4 Oral 0.22 protein_coding upstream_gene_variant MODIFIER -180T>A None
M0117467 OPHKODNO_00002 2450 4 Oral 0.22 protein_coding upstream_gene_variant MODIFIER -188A>C None
M0117468 OPHKODNO_00002 2454 4 Oral 0.22 protein_coding upstream_gene_variant MODIFIER -192C>T None
M0117469 OPHKODNO_00002 2460 4 Oral 0.22 protein_coding upstream_gene_variant MODIFIER -198T>G None
M0117470 OPHKODNO_00002 2478 4 Oral 0.22 protein_coding upstream_gene_variant MODIFIER -216G>A None
M0117471 OPHKODNO_00002 2493 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -231A>G None
M0117472 OPHKODNO_00002 2494 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -232A>T None
M0117473 OPHKODNO_00002 2533 5 Oral 0.28 protein_coding upstream_gene_variant MODIFIER -271C>T None
M0117474 OPHKODNO_00002 2565 6 Oral 0.33 protein_coding upstream_gene_variant MODIFIER -303G>C None
M0117475 OPHKODNO_00002 2568 5 Oral 0.28 protein_coding upstream_gene_variant MODIFIER -306A>G None
M0117476 OPHKODNO_00002 2580 5 Oral 0.28 protein_coding upstream_gene_variant MODIFIER -318C>A None
M0117477 OPHKODNO_00002 2585 6 Oral 0.33 protein_coding upstream_gene_variant MODIFIER -323T>C None
M0117478 OPHKODNO_00003 2645 7 Oral 0.39 protein_coding synonymous_variant LOW 36T>C Cys12Cys
M0117479 OPHKODNO_00003 2719 7 Oral 0.39 protein_coding missense_variant MODERATE 110T>C Val37Ala
M0117480 OPHKODNO_00003 2784 6 Oral 0.33 protein_coding missense_variant MODERATE 175G>A Ala59Thr
M0117481 OPHKODNO_00003 2868 5 Oral 0.28 protein_coding missense_variant MODERATE 259G>A Val87Ile
M0117482 OPHKODNO_00003 2876 3 Oral 0.17 protein_coding synonymous_variant LOW 267G>T Val89Val
M0117483 OPHKODNO_00003 2885 4 Oral 0.22 protein_coding synonymous_variant LOW 276G>A Ala92Ala
M0117484 OPHKODNO_00003 2930 7 Oral 0.39 protein_coding synonymous_variant LOW 321T>G Pro107Pro
M0117485 OPHKODNO_00003 2966 5 Oral 0.28 protein_coding synonymous_variant LOW 357G>T Leu119Leu
M0117486 OPHKODNO_00003 2975 4 Oral 0.22 protein_coding synonymous_variant LOW 366C>T Ser122Ser
M0117487 OPHKODNO_00003 2993 6 Oral 0.33 protein_coding synonymous_variant LOW 384T>C Tyr128Tyr
M0117488 OPHKODNO_00003 2997 6 Oral 0.33 protein_coding synonymous_variant LOW 388T>C Leu130Leu
M0117489 OPHKODNO_00003 3095 3 Oral 0.17 protein_coding synonymous_variant LOW 486C>A Val162Val
M0117490 OPHKODNO_00003 3104 7 Oral 0.39 protein_coding synonymous_variant LOW 495T>A Ala165Ala
M0117491 OPHKODNO_00003 3143 8 Oral 0.44 protein_coding synonymous_variant LOW 534T>G Leu178Leu
M0117492 OPHKODNO_00003 3180 8 Oral 0.44 protein_coding missense_variant MODERATE 571G>T Ala191Ser
M0117493 OPHKODNO_00003 3236 6 Oral 0.33 protein_coding synonymous_variant LOW 627T>C Arg209Arg
M0117494 OPHKODNO_00003 3244 7 Oral 0.39 protein_coding missense_variant MODERATE 635G>T Arg212Leu
M0117495 OPHKODNO_00003 3368 4 Oral 0.22 protein_coding synonymous_variant LOW 759A>G Thr253Thr
M0117496 OPHKODNO_00003 3405 6 Oral 0.33 protein_coding missense_variant MODERATE 796A>G Ile266Val
M0117497 OPHKODNO_00003 3419 4 Oral 0.22 protein_coding synonymous_variant LOW 810G>T Leu270Leu
M0117498 OPHKODNO_00003 3446 8 Oral 0.44 protein_coding synonymous_variant LOW 837C>T Ile279Ile
M0117499 OPHKODNO_00003 3461 7 Oral 0.39 protein_coding synonymous_variant LOW 852C>T Arg284Arg
M0117500 OPHKODNO_00003 3584 7 Oral 0.39 protein_coding synonymous_variant LOW 975T>C Ser325Ser
M0117501 OPHKODNO_00003 3692 5 Oral 0.28 protein_coding synonymous_variant LOW 1083C>T Ala361Ala
M0117502 OPHKODNO_00003 3776 7 Oral 0.39 protein_coding synonymous_variant LOW 1167C>T Gly389Gly
M0117503 OPHKODNO_00003 3791 6 Oral 0.33 protein_coding synonymous_variant LOW 1182T>C Gly394Gly
M0117504 OPHKODNO_00003 4113 6 Oral 0.33 protein_coding missense_variant MODERATE 1504A>G Ile502Val
M0117505 OPHKODNO_00003 4121 3 Oral 0.17 protein_coding synonymous_variant LOW 1512C>T Val504Val
M0117506 OPHKODNO_00003 4226 8 Oral 0.44 protein_coding synonymous_variant LOW 1617C>G Leu539Leu
M0117507 OPHKODNO_00003 4251 8 Oral 0.44 protein_coding missense_variant MODERATE 1642A>C Ile548Leu
M0117508 OPHKODNO_00003 4253 5 Oral 0.28 protein_coding synonymous_variant LOW 1644A>T Ile548Ile
M0117509 OPHKODNO_00003 4284 7 Oral 0.39 protein_coding missense_variant MODERATE 1675G>A Val559Ile
M0117510 OPHKODNO_00003 4292 7 Oral 0.39 protein_coding synonymous_variant LOW 1683T>C Gly561Gly
M0117511 OPHKODNO_00003 4349 3 Oral 0.17 protein_coding synonymous_variant LOW 1740A>G Leu580Leu
M0117512 OPHKODNO_00003 4370 6 Oral 0.33 protein_coding synonymous_variant LOW 1761T>C Leu587Leu
M0117513 OPHKODNO_00003 4404 5 Oral 0.28 protein_coding missense_variant MODERATE 1795A>G Thr599Ala
M0117514 OPHKODNO_00003 4433 6 Oral 0.33 protein_coding synonymous_variant LOW 1824G>T Ala608Ala
M0117515 OPHKODNO_00003 4435 5 Oral 0.28 protein_coding missense_variant MODERATE 1826C>G Ala609Gly
M0117516 OPHKODNO_00003 4493 8 Oral 0.44 protein_coding synonymous_variant LOW 1884A>G Pro628Pro
M0117517 OPHKODNO_00003 4540 3 Oral 0.17 protein_coding missense_variant MODERATE 1931G>A Ser644Asn
M0117518 OPHKODNO_00003 4554 8 Oral 0.44 protein_coding missense_variant MODERATE 1945A>G Thr649Ala
M0117519 OPHKODNO_00004 4614 5 Oral 0.28 protein_coding missense_variant MODERATE 25A>G Ser9Gly
M0117520 OPHKODNO_00004 4616 6 Oral 0.33 protein_coding synonymous_variant LOW 27T>C Ser9Ser
M0117521 OPHKODNO_00004 4621 6 Oral 0.33 protein_coding missense_variant MODERATE 32G>T Gly11Val
M0117522 OPHKODNO_00004 4653 4 Oral 0.22 protein_coding missense_variant MODERATE 64A>G Asn22Asp
M0117523 OPHKODNO_00004 4655 6 Oral 0.33 protein_coding synonymous_variant LOW 66T>C Asn22Asn
M0117524 OPHKODNO_00004 4673 7 Oral 0.39 protein_coding synonymous_variant LOW 84A>G Gln28Gln
M0117525 OPHKODNO_00004 4724 5 Oral 0.28 protein_coding synonymous_variant LOW 135G>A Val45Val
M0117526 OPHKODNO_00004 4736 6 Oral 0.33 protein_coding synonymous_variant LOW 147A>G Val49Val
M0117527 OPHKODNO_00004 4767 5 Oral 0.28 protein_coding synonymous_variant LOW 178C>T Leu60Leu
M0117528 OPHKODNO_00004 4790 6 Oral 0.33 protein_coding missense_variant MODERATE 201A>G Ile67Met
M0117529 OPHKODNO_00004 4811 5 Oral 0.28 protein_coding synonymous_variant LOW 222G>T Val74Val
M0117530 OPHKODNO_00004 4817 5 Oral 0.28 protein_coding synonymous_variant LOW 228C>T Ile76Ile
M0117531 OPHKODNO_00004 4823 4 Oral 0.22 protein_coding synonymous_variant LOW 234T>C Gly78Gly
M0117532 OPHKODNO_00004 4826 5 Oral 0.28 protein_coding synonymous_variant LOW 237C>G Arg79Arg
M0117533 OPHKODNO_00004 4835 6 Oral 0.33 protein_coding synonymous_variant LOW 246G>A Glu82Glu
M0117534 OPHKODNO_00004 4838 6 Oral 0.33 protein_coding synonymous_variant LOW 249C>T Arg83Arg
M0117535 OPHKODNO_00004 4847 6 Oral 0.33 protein_coding synonymous_variant LOW 258A>G Glu86Glu
M0117536 OPHKODNO_00004 4946 6 Oral 0.33 protein_coding synonymous_variant LOW 357C>T Asp119Asp
M0117537 OPHKODNO_00004 4961 6 Oral 0.33 protein_coding synonymous_variant LOW 372C>T Gly124Gly
M0117538 OPHKODNO_00004 4967 7 Oral 0.39 protein_coding synonymous_variant LOW 378C>T Ala126Ala
M0117539 OPHKODNO_00004 5000 3 Oral 0.17 protein_coding synonymous_variant LOW 411C>T Ser137Ser
M0117540 OPHKODNO_00004 5001 5 Oral 0.28 protein_coding missense_variant MODERATE 412A>G Ile138Val
M0117541 OPHKODNO_00004 5003 7 Oral 0.39 protein_coding synonymous_variant LOW 414T>C Ile138Ile
M0117542 OPHKODNO_00004 5024 5 Oral 0.28 protein_coding synonymous_variant LOW 435G>A Glu145Glu
M0117543 OPHKODNO_00004 5066 5 Oral 0.28 protein_coding synonymous_variant LOW 477A>G Arg159Arg
M0117544 OPHKODNO_00004 5072 5 Oral 0.28 protein_coding synonymous_variant LOW 483C>T Gly161Gly
M0117545 OPHKODNO_00004 5075 5 Oral 0.28 protein_coding synonymous_variant LOW 486T>C Ile162Ile
M0117546 OPHKODNO_00004 5160 5 Oral 0.28 protein_coding missense_variant MODERATE 571A>G Ile191Val
M0117547 OPHKODNO_00004 5168 5 Oral 0.28 protein_coding synonymous_variant LOW 579T>G Leu193Leu
M0117548 OPHKODNO_00004 5186 6 Oral 0.33 protein_coding synonymous_variant LOW 597T>G Arg199Arg
M0117549 OPHKODNO_00004 5262 4 Oral 0.22 protein_coding missense_variant MODERATE 673A>G Ser225Gly
M0117550 OPHKODNO_00004 5263 4 Oral 0.22 protein_coding missense_variant MODERATE 674G>C Ser225Thr
M0117551 OPHKODNO_00004 5293 5 Oral 0.28 protein_coding missense_variant MODERATE 704C>T Ala235Val
M0117552 OPHKODNO_00004 5303 5 Oral 0.28 protein_coding synonymous_variant LOW 714C>T Asn238Asn
M0117553 OPHKODNO_00004 5327 4 Oral 0.22 protein_coding synonymous_variant LOW 738T>C Asn246Asn
M0117554 OPHKODNO_00004 5329 4 Oral 0.22 protein_coding missense_variant MODERATE 740A>G Glu247Gly
M0117555 OPHKODNO_00005 5377 7 Oral 0.39 protein_coding synonymous_variant LOW 45A>G Val15Val
M0117556 OPHKODNO_00005 5395 7 Oral 0.39 protein_coding synonymous_variant LOW 63T>C Gly21Gly
M0117557 OPHKODNO_00005 5398 4 Oral 0.22 protein_coding synonymous_variant LOW 66C>T Asp22Asp
M0117558 OPHKODNO_00005 5425 4 Oral 0.22 protein_coding synonymous_variant LOW 93T>C His31His
M0117559 OPHKODNO_00005 5470 6 Oral 0.33 protein_coding synonymous_variant LOW 138C>T Phe46Phe
M0117560 OPHKODNO_00005 5476 7 Oral 0.39 protein_coding synonymous_variant LOW 144T>C Gly48Gly
M0117561 OPHKODNO_00005 5500 6 Oral 0.33 protein_coding synonymous_variant LOW 168T>C Gly56Gly
M0117562 OPHKODNO_00005 5503 5 Oral 0.28 protein_coding synonymous_variant LOW 171A>G Gly57Gly
M0117563 OPHKODNO_00005 5548 4 Oral 0.22 protein_coding synonymous_variant LOW 216T>C Ala72Ala
M0117564 OPHKODNO_00005 5599 6 Oral 0.33 protein_coding synonymous_variant LOW 267C>T Thr89Thr
M0117565 OPHKODNO_00005 5641 4 Oral 0.22 protein_coding synonymous_variant LOW 309A>G Glu103Glu
M0117566 OPHKODNO_00005 5653 6 Oral 0.33 protein_coding synonymous_variant LOW 321G>T Thr107Thr
M0117567 OPHKODNO_00005 5725 6 Oral 0.33 protein_coding synonymous_variant LOW 393C>T Asp131Asp
M0117568 OPHKODNO_00005 5746 6 Oral 0.33 protein_coding missense_variant MODERATE 414G>T Gln138His
M0117569 OPHKODNO_00007 6771 12 Oral 0.67 protein_coding synonymous_variant LOW 213A>G Ala71Ala
M0117570 OPHKODNO_00007 6795 16 Oral 0.89 protein_coding synonymous_variant LOW 237T>C Gly79Gly
M0117571 OPHKODNO_00007 6846 17 Oral 0.94 protein_coding synonymous_variant LOW 288A>C Ala96Ala
M0117572 OPHKODNO_00007 7044 17 Oral 0.94 protein_coding synonymous_variant LOW 486T>C Val162Val
M0117573 OPHKODNO_00007 7065 17 Oral 0.94 protein_coding synonymous_variant LOW 507T>C Ile169Ile
M0117574 OPHKODNO_00007 7083 16 Oral 0.89 protein_coding synonymous_variant LOW 525T>C Asp175Asp
M0117575 OPHKODNO_00007 7281 6 Oral 0.33 protein_coding synonymous_variant LOW 723A>G Glu241Glu
M0117576 OPHKODNO_00007 7302 11 Oral 0.61 protein_coding synonymous_variant LOW 744A>C Ala248Ala
M0117577 OPHKODNO_00007 7356 16 Oral 0.89 protein_coding synonymous_variant LOW 798T>C Thr266Thr
M0117578 OPHKODNO_00007 7359 16 Oral 0.89 protein_coding missense_variant MODERATE 801G>C Lys267Asn
M0117579 OPHKODNO_00007 7455 15 Oral 0.83 protein_coding synonymous_variant LOW 897G>A Glu299Glu
M0117580 OPHKODNO_00007 7536 15 Oral 0.83 protein_coding synonymous_variant LOW 978G>A Ala326Ala
M0117581 OPHKODNO_00007 7539 16 Oral 0.89 protein_coding synonymous_variant LOW 981T>C Ile327Ile
M0117582 OPHKODNO_00007 7680 4 Oral 0.22 protein_coding synonymous_variant LOW 1122C>T Pro374Pro
M0117583 OPHKODNO_00007 7692 14 Oral 0.78 protein_coding synonymous_variant LOW 1134T>C Ile378Ile
M0117584 OPHKODNO_00007 7713 11 Oral 0.61 protein_coding synonymous_variant LOW 1155A>G Ala385Ala
M0117585 OPHKODNO_00007 7911 15 Oral 0.83 protein_coding synonymous_variant LOW 1353T>C Arg451Arg
M0117586 OPHKODNO_00007 7941 6 Oral 0.33 protein_coding synonymous_variant LOW 1383T>C Ile461Ile
M0117587 OPHKODNO_00007 7945 5 Oral 0.28 protein_coding missense_variant MODERATE 1387G>A Val463Ile
M0117588 OPHKODNO_00008 8478 3 Oral 0.17 protein_coding synonymous_variant LOW 423T>C Leu141Leu
M0117589 OPHKODNO_00001 186 7 Oral 0.39 protein_coding missense_variant MODERATE 181A>G Ile61Val
M0117590 OPHKODNO_00001 387 7 Oral 0.39 protein_coding missense_variant MODERATE 382A>G Thr128Ala
M0117591 OPHKODNO_00003 728 9 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -1882C>A None
M0117592 OPHKODNO_00002 1117 5 Oral 0.28 protein_coding synonymous_variant LOW 1146G>A Ala382Ala
M0117593 OPHKODNO_00002 1387 10 Oral 0.56 protein_coding synonymous_variant LOW 876A>T Ala292Ala
M0117594 OPHKODNO_00002 1512 11 Oral 0.61 protein_coding missense_variant MODERATE 751C>A Gln251Lys
M0117595 OPHKODNO_00002 1515 9 Oral 0.50 protein_coding missense_variant MODERATE 748C>G Leu250Val
M0117596 OPHKODNO_00002 1738 8 Oral 0.44 protein_coding synonymous_variant LOW 525A>G Ala175Ala
M0117597 OPHKODNO_00002 1756 5 Oral 0.28 protein_coding synonymous_variant LOW 507C>T Phe169Phe
M0117598 OPHKODNO_00002 1876 7 Oral 0.39 protein_coding synonymous_variant LOW 387A>G Val129Val
M0117599 OPHKODNO_00002 2149 3 Oral 0.17 protein_coding synonymous_variant LOW 114C>A Arg38Arg
M0117600 OPHKODNO_00002 2161 3 Oral 0.17 protein_coding synonymous_variant LOW 102C>A Ala34Ala
M0117601 OPHKODNO_00002 2176 3 Oral 0.17 protein_coding synonymous_variant LOW 87A>T Arg29Arg
M0117602 OPHKODNO_00002 2179 4 Oral 0.22 protein_coding synonymous_variant LOW 84G>A Glu28Glu
M0117603 OPHKODNO_00002 2182 3 Oral 0.17 protein_coding synonymous_variant LOW 81T>C Thr27Thr
M0117604 OPHKODNO_00002 2183 3 Oral 0.17 protein_coding missense_variant MODERATE 80C>G Thr27Ser
M0117605 OPHKODNO_00002 6483 4 Oral 0.22 protein_coding upstream_gene_variant MODIFIER -4221T>C None
M0117606 OPHKODNO_00002 6532 15 Oral 0.83 protein_coding upstream_gene_variant MODIFIER -4270C>T None
M0117607 OPHKODNO_00007 7062 16 Oral 0.89 protein_coding synonymous_variant LOW 504A>C Arg168Arg
M0117608 OPHKODNO_00007 7120 7 Oral 0.39 protein_coding missense_variant MODERATE 562G>C Glu188Gln
M0117609 OPHKODNO_00007 7271 11 Oral 0.61 protein_coding missense_variant MODERATE 713A>C Glu238Ala
M0117610 OPHKODNO_00007 7272 11 Oral 0.61 protein_coding missense_variant MODERATE 714G>T Glu238Asp
M0117611 OPHKODNO_00007 7542 14 Oral 0.78 protein_coding synonymous_variant LOW 984T>C Gly328Gly
M0117612 OPHKODNO_00008 8824 5 Oral 0.28 protein_coding missense_variant MODERATE 77C>T Ala26Val
M0117613 OPHKODNO_00008 9070 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -170A>G None
M0117614 OPHKODNO_00008 9073 13 Oral 0.72 protein_coding upstream_gene_variant MODIFIER -173A>G None
M0117615 OPHKODNO_00008 9776 13 Oral 0.72 protein_coding upstream_gene_variant MODIFIER -876G>C None
M0117616 OPHKODNO_00008 9883 14 Oral 0.78 protein_coding upstream_gene_variant MODIFIER -983A>C None
M0117617 OPHKODNO_00008 9989 12 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -1089T>G None
M0117618 OPHKODNO_00008 9990 12 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -1090A>T None
M0117619 OPHKODNO_00008 10134 9 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -1234A>C None
M0117620 OPHKODNO_00008 10146 13 Oral 0.72 protein_coding upstream_gene_variant MODIFIER -1246G>T None
M0117621 OPHKODNO_00008 10147 13 Oral 0.72 protein_coding upstream_gene_variant MODIFIER -1247T>A None
M0117622 OPHKODNO_00008 10239 13 Oral 0.72 protein_coding upstream_gene_variant MODIFIER -1339G>A None
M0117623 OPHKODNO_00002 874 3 Oral 0.17 protein_coding synonymous_variant LOW 1389T>G Val463Val
M0117624 OPHKODNO_00002 877 3 Oral 0.17 protein_coding missense_variant MODERATE 1386A>C Glu462Asp
M0117625 OPHKODNO_00002 889 3 Oral 0.17 protein_coding synonymous_variant LOW 1374T>C Gly458Gly
M0117626 OPHKODNO_00002 955 5 Oral 0.28 protein_coding synonymous_variant LOW 1308A>C Ala436Ala
M0117627 OPHKODNO_00002 957 5 Oral 0.28 protein_coding missense_variant MODERATE 1306G>T Ala436Ser
M0117628 OPHKODNO_00002 961 6 Oral 0.33 protein_coding synonymous_variant LOW 1302G>C Pro434Pro
M0117629 OPHKODNO_00002 1449 5 Oral 0.28 protein_coding missense_variant MODERATE 814A>G Asn272Asp
M0117630 OPHKODNO_00002 1942 4 Oral 0.22 protein_coding synonymous_variant LOW 321A>G Ala107Ala
M0117631 OPHKODNO_00002 2011 6 Oral 0.33 protein_coding synonymous_variant LOW 252C>G Val84Val
M0117632 OPHKODNO_00003 2738 4 Oral 0.22 protein_coding synonymous_variant LOW 129C>G Leu43Leu
M0117633 OPHKODNO_00003 3260 3 Oral 0.17 protein_coding synonymous_variant LOW 651C>T Asp217Asp
M0117634 OPHKODNO_00003 3357 3 Oral 0.17 protein_coding missense_variant MODERATE 748A>C Met250Leu
M0117635 OPHKODNO_00003 3794 4 Oral 0.22 protein_coding synonymous_variant LOW 1185T>C Ala395Ala
M0117636 OPHKODNO_00003 4202 6 Oral 0.33 protein_coding synonymous_variant LOW 1593A>G Glu531Glu
M0117637 OPHKODNO_00003 4237 5 Oral 0.28 protein_coding missense_variant MODERATE 1628G>A Arg543Gln
M0117638 OPHKODNO_00003 4518 5 Oral 0.28 protein_coding missense_variant MODERATE 1909C>A Leu637Met
M0117639 OPHKODNO_00004 5219 3 Oral 0.17 protein_coding synonymous_variant LOW 630T>C Asp210Asp
M0117640 OPHKODNO_00004 5222 3 Oral 0.17 protein_coding synonymous_variant LOW 633A>G Ala211Ala
M0117641 OPHKODNO_00004 5232 3 Oral 0.17 protein_coding missense_variant MODERATE 643A>G Thr215Ala
M0117642 OPHKODNO_00005 5347 6 Oral 0.33 protein_coding synonymous_variant LOW 15T>C Ser5Ser
M0117643 OPHKODNO_00005 5718 5 Oral 0.28 protein_coding missense_variant MODERATE 386A>G His129Arg
M0117644 OPHKODNO_00005 5723 5 Oral 0.28 protein_coding missense_variant MODERATE 391G>A Asp131Asn
M0117645 OPHKODNO_00007 6750 11 Oral 0.61 protein_coding synonymous_variant LOW 192T>C Arg64Arg
M0117646 OPHKODNO_00007 6765 3 Oral 0.17 protein_coding synonymous_variant LOW 207C>T Ile69Ile
M0117647 OPHKODNO_00007 7206 3 Oral 0.17 protein_coding synonymous_variant LOW 648G>A Leu216Leu
M0117648 OPHKODNO_00007 7416 6 Oral 0.33 protein_coding synonymous_variant LOW 858C>T Ile286Ile
M0117649 OPHKODNO_00008 8589 3 Oral 0.17 protein_coding synonymous_variant LOW 312T>C Val104Val
M0117650 OPHKODNO_00001 319 3 Oral 0.17 protein_coding missense_variant MODERATE 314T>G Leu105Arg
M0117651 OPHKODNO_00001 320 3 Oral 0.17 protein_coding synonymous_variant LOW 315T>C Leu105Leu
M0117652 OPHKODNO_00001 321 3 Oral 0.17 protein_coding missense_variant MODERATE 316G>A Ala106Thr
M0117653 OPHKODNO_00001 325 3 Oral 0.17 protein_coding missense_variant MODERATE 320A>G Glu107Gly
M0117654 OPHKODNO_00001 326 3 Oral 0.17 protein_coding missense_variant MODERATE 321G>T Glu107Asp
M0117655 OPHKODNO_00001 327 3 Oral 0.17 protein_coding missense_variant MODERATE 322G>A Ala108Thr
M0117656 OPHKODNO_00002 1146 5 Oral 0.28 protein_coding missense_variant MODERATE 1117G>A Val373Ile
M0117657 OPHKODNO_00002 2299 9 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -37G>C None
M0117658 OPHKODNO_00002 2301 9 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -39G>A None
M0117659 OPHKODNO_00003 3738 3 Oral 0.17 protein_coding synonymous_variant LOW 1129C>T Leu377Leu
M0117660 OPHKODNO_00003 3920 3 Oral 0.17 protein_coding synonymous_variant LOW 1311A>G Lys437Lys
M0117661 OPHKODNO_00003 4049 6 Oral 0.33 protein_coding synonymous_variant LOW 1440G>A Val480Val
M0117662 OPHKODNO_00003 4472 3 Oral 0.17 protein_coding synonymous_variant LOW 1863T>C Ala621Ala
M0117663 OPHKODNO_00003 4482 3 Oral 0.17 protein_coding missense_variant MODERATE 1873T>A Leu625Met
M0117664 OPHKODNO_00004 4697 4 Oral 0.22 protein_coding synonymous_variant LOW 108C>T Pro36Pro
M0117665 OPHKODNO_00004 4970 3 Oral 0.17 protein_coding synonymous_variant LOW 381A>T Arg127Arg
M0117666 OPHKODNO_00004 5135 3 Oral 0.17 protein_coding synonymous_variant LOW 546C>T Leu182Leu
M0117667 OPHKODNO_00005 5341 4 Oral 0.22 protein_coding synonymous_variant LOW 9C>A Thr3Thr
M0117668 OPHKODNO_00005 5662 3 Oral 0.17 protein_coding synonymous_variant LOW 330C>T Cys110Cys
M0117669 OPHKODNO_00005 5695 5 Oral 0.28 protein_coding synonymous_variant LOW 363T>C Tyr121Tyr
M0117670 OPHKODNO_00005 5716 4 Oral 0.22 protein_coding synonymous_variant LOW 384A>G Lys128Lys
M0117671 OPHKODNO_00007 7125 7 Oral 0.39 protein_coding synonymous_variant LOW 567C>T Gly189Gly
M0117672 OPHKODNO_00007 7668 8 Oral 0.44 protein_coding synonymous_variant LOW 1110T>C Ile370Ile
M0117673 OPHKODNO_00007 7776 3 Oral 0.17 protein_coding missense_variant MODERATE 1218G>C Glu406Asp
M0117674 OPHKODNO_00007 7794 5 Oral 0.28 protein_coding synonymous_variant LOW 1236C>A Ala412Ala
M0117675 OPHKODNO_00008 9268 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -368G>C None
M0117676 OPHKODNO_00008 9283 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -383A>G None
M0117677 OPHKODNO_00008 9312 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -412C>T None
M0117678 OPHKODNO_00008 9318 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -418A>G None
M0117679 OPHKODNO_00008 9327 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -427C>T None
M0117680 OPHKODNO_00008 9330 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -430C>T None
M0117681 OPHKODNO_00002 997 3 Oral 0.17 protein_coding synonymous_variant LOW 1266G>C Leu422Leu
M0117682 OPHKODNO_00002 1000 3 Oral 0.17 protein_coding synonymous_variant LOW 1263T>C Gly421Gly
M0117683 OPHKODNO_00002 1107 3 Oral 0.17 protein_coding missense_variant MODERATE 1156T>A Ser386Thr
M0117684 OPHKODNO_00002 1150 3 Oral 0.17 protein_coding synonymous_variant LOW 1113G>A Ala371Ala
M0117685 OPHKODNO_00002 1414 3 Oral 0.17 protein_coding synonymous_variant LOW 849T>A Gly283Gly
M0117686 OPHKODNO_00002 1466 3 Oral 0.17 protein_coding missense_variant MODERATE 797A>G Asn266Ser
M0117687 OPHKODNO_00002 1648 4 Oral 0.22 protein_coding synonymous_variant LOW 615C>G Leu205Leu
M0117688 OPHKODNO_00002 1837 3 Oral 0.17 protein_coding synonymous_variant LOW 426C>T Gly142Gly
M0117689 OPHKODNO_00002 1963 6 Oral 0.33 protein_coding synonymous_variant LOW 300G>A Ala100Ala
M0117690 OPHKODNO_00002 2053 8 Oral 0.44 protein_coding synonymous_variant LOW 210T>C Gly70Gly
M0117691 OPHKODNO_00002 2059 5 Oral 0.28 protein_coding synonymous_variant LOW 204C>G Ala68Ala
M0117692 OPHKODNO_00007 7413 5 Oral 0.28 protein_coding synonymous_variant LOW 855G>A Glu285Glu
M0117693 OPHKODNO_00008 8402 4 Oral 0.22 protein_coding missense_variant MODERATE 499G>A Ala167Thr
M0117694 OPHKODNO_00008 8721 3 Oral 0.17 protein_coding synonymous_variant LOW 180T>C Pro60Pro
M0117695 OPHKODNO_00008 9126 6 Oral 0.33 protein_coding upstream_gene_variant MODIFIER -226G>A None
M0117696 OPHKODNO_00008 9682 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -782A>G None
M0117697 OPHKODNO_00008 9753 5 Oral 0.28 protein_coding upstream_gene_variant MODIFIER -853A>G None
M0117698 OPHKODNO_00008 9825 5 Oral 0.28 protein_coding upstream_gene_variant MODIFIER -925C>T None
M0117699 OPHKODNO_00002 1282 3 Oral 0.17 protein_coding synonymous_variant LOW 981C>T Ile327Ile
M0117700 OPHKODNO_00007 7389 4 Oral 0.22 protein_coding synonymous_variant LOW 831G>A Leu277Leu
M0117701 OPHKODNO_00007 7719 3 Oral 0.17 protein_coding synonymous_variant LOW 1161G>A Glu387Glu
M0117702 OPHKODNO_00008 9141 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -241C>T None
M0117703 OPHKODNO_00008 9666 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -766G>A None
M0117704 OPHKODNO_00008 9679 6 Oral 0.33 protein_coding upstream_gene_variant MODIFIER -779G>A None
M0117705 OPHKODNO_00008 9735 8 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -835G>C None
M0117706 OPHKODNO_00008 9744 5 Oral 0.28 protein_coding upstream_gene_variant MODIFIER -844T>A None
M0117707 OPHKODNO_00008 10337 5 Oral 0.28 protein_coding upstream_gene_variant MODIFIER -1437G>T None
M0117708 OPHKODNO_00003 755 4 Oral 0.22 protein_coding upstream_gene_variant MODIFIER -1855T>C None
M0117709 OPHKODNO_00002 943 3 Oral 0.17 protein_coding synonymous_variant LOW 1320G>A Ala440Ala
M0117710 OPHKODNO_00002 1798 3 Oral 0.17 protein_coding synonymous_variant LOW 465C>T Leu155Leu
M0117711 OPHKODNO_00002 6418 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -4156C>T None
M0117712 OPHKODNO_00002 6449 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -4187G>T None
M0117713 OPHKODNO_00007 6819 5 Oral 0.28 protein_coding synonymous_variant LOW 261C>T Val87Val
M0117714 OPHKODNO_00007 7047 4 Oral 0.22 protein_coding synonymous_variant LOW 489C>T Ala163Ala
M0117715 OPHKODNO_00007 7887 6 Oral 0.33 protein_coding synonymous_variant LOW 1329T>C Asp443Asp
M0117716 OPHKODNO_00008 8535 3 Oral 0.17 protein_coding synonymous_variant LOW 366C>T Ala122Ala
M0117717 OPHKODNO_00008 8814 4 Oral 0.22 protein_coding synonymous_variant LOW 87C>T Pro29Pro
M0117718 OPHKODNO_00008 8829 4 Oral 0.22 protein_coding synonymous_variant LOW 72C>T Gly24Gly
M0117719 OPHKODNO_00002 1576 4 Oral 0.22 protein_coding synonymous_variant LOW 687C>T Gly229Gly
M0117720 OPHKODNO_00002 1606 4 Oral 0.22 protein_coding synonymous_variant LOW 657C>T Ile219Ile
M0117721 OPHKODNO_00002 1681 4 Oral 0.22 protein_coding synonymous_variant LOW 582C>T Gly194Gly
M0117722 OPHKODNO_00004 4844 3 Oral 0.17 protein_coding synonymous_variant LOW 255T>C Arg85Arg
M0117723 OPHKODNO_00005 5376 3 Oral 0.17 protein_coding missense_variant MODERATE 44T>C Val15Ala
M0117724 OPHKODNO_00005 5393 3 Oral 0.17 protein_coding missense_variant MODERATE 61G>A Gly21Ser
M0117725 OPHKODNO_00005 5399 3 Oral 0.17 protein_coding missense_variant MODERATE 67A>G Thr23Ala
M0117726 OPHKODNO_00007 7278 4 Oral 0.22 protein_coding synonymous_variant LOW 720C>T Ser240Ser
M0117727 OPHKODNO_00007 7287 4 Oral 0.22 protein_coding synonymous_variant LOW 729A>C Ala243Ala
M0117728 OPHKODNO_00002 2297 3 Oral 0.17 protein_coding upstream_gene_variant MODIFIER -35C>A None
M0117729 OPHKODNO_00007 7677 3 Oral 0.17 protein_coding synonymous_variant LOW 1119C>T Gly373Gly
M0117730 OPHKODNO_00007 7695 3 Oral 0.17 protein_coding synonymous_variant LOW 1137C>T Gly379Gly






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term