Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1634
  Reference Plasmid   1111525849481954_bin.37__k141_44214
  Reference Plasmid Size   91185
  Reference Plasmid GC Content   0.70
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0008984 BDPDKLKN_00064 75460 14 Skin 0.09 protein_coding synonymous_variant LOW 753G>C Ala251Ala
M0008985 BDPDKLKN_00064 75463 14 Skin 0.09 protein_coding synonymous_variant LOW 756G>C Leu252Leu
M0008986 BDPDKLKN_00064 75523 14 Skin 0.09 protein_coding synonymous_variant LOW 816T>G Ala272Ala
M0008987 BDPDKLKN_00064 75538 14 Skin 0.09 protein_coding synonymous_variant LOW 831G>C Pro277Pro
M0008988 BDPDKLKN_00064 75553 14 Skin 0.09 protein_coding synonymous_variant LOW 846C>G Arg282Arg
M0008989 BDPDKLKN_00064 75595 13 Skin 0.08 protein_coding synonymous_variant LOW 888A>G Glu296Glu
M0008990 BDPDKLKN_00064 75598 13 Skin 0.08 protein_coding synonymous_variant LOW 891G>A Glu297Glu
M0008991 BDPDKLKN_00064 75605 13 Skin 0.08 protein_coding missense_variant MODERATE 898G>C Glu300Gln
M0008992 BDPDKLKN_00064 75655 13 Skin 0.08 protein_coding synonymous_variant LOW 948C>G Ala316Ala
M0008993 BDPDKLKN_00064 75664 13 Skin 0.08 protein_coding synonymous_variant LOW 957C>G Thr319Thr
M0008994 BDPDKLKN_00067 75676 13 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1565T>C None
M0008995 BDPDKLKN_00067 75681 13 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1560T>C None
M0008996 BDPDKLKN_00067 75683 13 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1558C>A None
M0008997 BDPDKLKN_00065 76155 3 Skin 0.02 protein_coding synonymous_variant LOW 24G>C Pro8Pro
M0008998 BDPDKLKN_00065 76192 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -14T>A None
M0008999 BDPDKLKN_00018 20921 3 Skin 0.02 protein_coding missense_variant MODERATE 456G>C Glu152Asp
M0009000 BDPDKLKN_00018 20933 3 Skin 0.02 protein_coding synonymous_variant LOW 468T>G Leu156Leu
M0009001 BDPDKLKN_00018 21086 3 Skin 0.02 protein_coding synonymous_variant LOW 621G>A Glu207Glu
M0009002 BDPDKLKN_00019 21546 4 Skin 0.03 protein_coding synonymous_variant LOW 171G>C Val57Val
M0009003 BDPDKLKN_00019 21555 3 Skin 0.02 protein_coding synonymous_variant LOW 180G>C Ala60Ala
M0009004 BDPDKLKN_00019 21558 3 Skin 0.02 protein_coding synonymous_variant LOW 183G>A Val61Val
M0009005 BDPDKLKN_00019 22077 3 Skin 0.02 protein_coding synonymous_variant LOW 702T>C Phe234Phe
M0009006 BDPDKLKN_00021 23244 6 Skin 0.04 protein_coding synonymous_variant LOW 300A>G Ala100Ala
M0009007 BDPDKLKN_00021 23268 3 Skin 0.02 protein_coding synonymous_variant LOW 324C>A Arg108Arg
M0009008 BDPDKLKN_00021 23298 3 Skin 0.02 protein_coding synonymous_variant LOW 354G>A Gln118Gln
M0009009 BDPDKLKN_00021 23451 6 Skin 0.04 protein_coding synonymous_variant LOW 507T>C Leu169Leu
M0009010 BDPDKLKN_00023 24379 3 Skin 0.02 protein_coding synonymous_variant LOW 9C>G Ala3Ala
M0009011 BDPDKLKN_00023 24386 3 Skin 0.02 protein_coding missense_variant MODERATE 16G>A Val6Ile
M0009012 BDPDKLKN_00023 24445 18 Skin 0.11 protein_coding synonymous_variant LOW 75G>T Thr25Thr
M0009013 BDPDKLKN_00024 25626 4 Skin 0.03 protein_coding synonymous_variant LOW 261G>A Pro87Pro
M0009014 BDPDKLKN_00024 25635 3 Skin 0.02 protein_coding synonymous_variant LOW 270C>T Asn90Asn
M0009015 BDPDKLKN_00061 71922 17 Skin 0.11 protein_coding synonymous_variant LOW 303G>C Leu101Leu
M0009016 BDPDKLKN_00002 1335 19 Skin 0.12 protein_coding missense_variant MODERATE 582C>A Asn194Lys
M0009017 BDPDKLKN_00003 2302 23 Skin 0.14 protein_coding synonymous_variant LOW 651C>G Thr217Thr
M0009018 BDPDKLKN_00003 2350 23 Skin 0.14 protein_coding synonymous_variant LOW 603G>C Ala201Ala
M0009019 BDPDKLKN_00003 2380 23 Skin 0.14 protein_coding synonymous_variant LOW 573T>C Thr191Thr
M0009020 BDPDKLKN_00003 2383 23 Skin 0.14 protein_coding synonymous_variant LOW 570T>C Val190Val
M0009021 BDPDKLKN_00005 4173 3 Skin 0.02 protein_coding synonymous_variant LOW 912C>G Thr304Thr
M0009022 BDPDKLKN_00005 4191 4 Skin 0.03 protein_coding synonymous_variant LOW 894A>C Thr298Thr
M0009023 BDPDKLKN_00007 7109 5 Skin 0.03 protein_coding synonymous_variant LOW 1872C>T Tyr624Tyr
M0009024 BDPDKLKN_00007 7340 4 Skin 0.03 protein_coding synonymous_variant LOW 1641A>G Arg547Arg
M0009025 BDPDKLKN_00007 7358 4 Skin 0.03 protein_coding synonymous_variant LOW 1623C>G Ala541Ala
M0009026 BDPDKLKN_00007 7370 4 Skin 0.03 protein_coding synonymous_variant LOW 1611G>T Leu537Leu
M0009027 BDPDKLKN_00007 7373 4 Skin 0.03 protein_coding synonymous_variant LOW 1608A>G Glu536Glu
M0009028 BDPDKLKN_00007 7376 4 Skin 0.03 protein_coding synonymous_variant LOW 1605C>G Ser535Ser
M0009029 BDPDKLKN_00007 7412 3 Skin 0.02 protein_coding synonymous_variant LOW 1569C>T Arg523Arg
M0009030 BDPDKLKN_00007 7450 4 Skin 0.03 protein_coding missense_variant MODERATE 1531G>T Ala511Ser
M0009031 BDPDKLKN_00007 7454 3 Skin 0.02 protein_coding synonymous_variant LOW 1527G>C Ala509Ala
M0009032 BDPDKLKN_00007 7556 5 Skin 0.03 protein_coding synonymous_variant LOW 1425A>G Pro475Pro
M0009033 BDPDKLKN_00007 7595 5 Skin 0.03 protein_coding synonymous_variant LOW 1386T>C Arg462Arg
M0009034 BDPDKLKN_00007 7652 5 Skin 0.03 protein_coding synonymous_variant LOW 1329A>C Ala443Ala
M0009035 BDPDKLKN_00007 7736 3 Skin 0.02 protein_coding synonymous_variant LOW 1245T>C His415His
M0009036 BDPDKLKN_00007 7751 3 Skin 0.02 protein_coding synonymous_variant LOW 1230C>T Tyr410Tyr
M0009037 BDPDKLKN_00009 10298 3 Skin 0.02 protein_coding synonymous_variant LOW 630C>T Asn210Asn
M0009038 BDPDKLKN_00010 11124 3 Skin 0.02 protein_coding missense_variant MODERATE 121A>G Met41Val
M0009039 BDPDKLKN_00011 12337 3 Skin 0.02 protein_coding synonymous_variant LOW 549T>C Asp183Asp
M0009040 BDPDKLKN_00071 82149 18 Skin 0.11 protein_coding synonymous_variant LOW 2418G>C Pro806Pro
M0009041 BDPDKLKN_00071 82152 18 Skin 0.11 protein_coding synonymous_variant LOW 2415C>A Gly805Gly
M0009042 BDPDKLKN_00071 82185 18 Skin 0.11 protein_coding synonymous_variant LOW 2382T>C Arg794Arg
M0009043 BDPDKLKN_00071 82192 18 Skin 0.11 protein_coding missense_variant MODERATE 2375T>C Val792Ala
M0009044 BDPDKLKN_00071 82193 17 Skin 0.11 protein_coding missense_variant MODERATE 2374G>A Val792Ile
M0009045 BDPDKLKN_00071 82209 18 Skin 0.11 protein_coding synonymous_variant LOW 2358C>G Val786Val
M0009046 BDPDKLKN_00071 82227 16 Skin 0.10 protein_coding synonymous_variant LOW 2340C>A Thr780Thr
M0009047 BDPDKLKN_00071 83226 17 Skin 0.11 protein_coding synonymous_variant LOW 1341T>C Phe447Phe
M0009048 BDPDKLKN_00071 83727 16 Skin 0.10 protein_coding synonymous_variant LOW 840C>T Tyr280Tyr
M0009049 BDPDKLKN_00071 83739 18 Skin 0.11 protein_coding synonymous_variant LOW 828G>A Glu276Glu
M0009050 BDPDKLKN_00071 83767 16 Skin 0.10 protein_coding missense_variant MODERATE 800A>G Lys267Arg
M0009051 BDPDKLKN_00071 83768 16 Skin 0.10 protein_coding missense_variant MODERATE 799A>G Lys267Glu
M0009052 BDPDKLKN_00071 83775 16 Skin 0.10 protein_coding synonymous_variant LOW 792G>A Val264Val
M0009053 BDPDKLKN_00071 83799 16 Skin 0.10 protein_coding synonymous_variant LOW 768C>G Thr256Thr
M0009054 BDPDKLKN_00076 88721 12 Skin 0.08 protein_coding synonymous_variant LOW 414G>A Glu138Glu
M0009055 BDPDKLKN_00076 88769 12 Skin 0.08 protein_coding synonymous_variant LOW 462G>A Ala154Ala
M0009056 BDPDKLKN_00076 88790 12 Skin 0.08 protein_coding synonymous_variant LOW 483C>A Gly161Gly
M0009057 BDPDKLKN_00076 88850 12 Skin 0.08 protein_coding synonymous_variant LOW 543G>C Pro181Pro
M0009058 BDPDKLKN_00076 88889 12 Skin 0.08 protein_coding synonymous_variant LOW 582C>G Ala194Ala
M0009059 BDPDKLKN_00076 88898 12 Skin 0.08 protein_coding synonymous_variant LOW 591G>C Val197Val
M0009060 BDPDKLKN_00076 88976 12 Skin 0.08 protein_coding synonymous_variant LOW 669G>A Pro223Pro
M0009061 BDPDKLKN_00076 89212 12 Skin 0.08 protein_coding missense_variant MODERATE 905C>T Pro302Leu
M0009062 BDPDKLKN_00070 81541 3 Skin 0.02 protein_coding synonymous_variant LOW 465G>A Glu155Glu
M0009063 BDPDKLKN_00007 8948 3 Skin 0.02 protein_coding missense_variant MODERATE 33G>C Trp11Cys
M0009064 BDPDKLKN_00007 8949 3 Skin 0.02 protein_coding stop_gained HIGH 32G>A Trp11*
M0009065 BDPDKLKN_00008 9001 4 Skin 0.03 protein_coding missense_variant MODERATE 818G>C Gly273Ala
M0009066 BDPDKLKN_00008 9123 4 Skin 0.03 protein_coding synonymous_variant LOW 696C>G Ala232Ala
M0009067 BDPDKLKN_00008 9252 5 Skin 0.03 protein_coding synonymous_variant LOW 567G>C Val189Val
M0009068 BDPDKLKN_00008 9527 3 Skin 0.02 protein_coding synonymous_variant LOW 292T>C Leu98Leu
M0009069 BDPDKLKN_00008 9696 4 Skin 0.03 protein_coding synonymous_variant LOW 123C>T Tyr41Tyr
M0009070 BDPDKLKN_00008 9702 4 Skin 0.03 protein_coding synonymous_variant LOW 117T>C Phe39Phe
M0009071 BDPDKLKN_00009 9917 3 Skin 0.02 protein_coding synonymous_variant LOW 1011T>C His337His
M0009072 BDPDKLKN_00009 9965 3 Skin 0.02 protein_coding synonymous_variant LOW 963T>G Val321Val
M0009073 BDPDKLKN_00009 10045 3 Skin 0.02 protein_coding missense_variant MODERATE 883A>G Arg295Gly
M0009074 BDPDKLKN_00009 10736 3 Skin 0.02 protein_coding synonymous_variant LOW 192T>G Leu64Leu
M0009075 BDPDKLKN_00010 11456 3 Skin 0.02 protein_coding synonymous_variant LOW 453C>G Val151Val
M0009076 BDPDKLKN_00010 11753 3 Skin 0.02 protein_coding synonymous_variant LOW 750T>G Ala250Ala
M0009077 BDPDKLKN_00010 11786 3 Skin 0.02 protein_coding synonymous_variant LOW 783G>C Val261Val
M0009078 BDPDKLKN_00010 11837 3 Skin 0.02 protein_coding synonymous_variant LOW 834C>G Gly278Gly
M0009079 BDPDKLKN_00011 12115 3 Skin 0.02 protein_coding synonymous_variant LOW 771C>G Ser257Ser
M0009080 BDPDKLKN_00011 12598 25 Skin 0.16 protein_coding synonymous_variant LOW 288C>T Asp96Asp
M0009081 BDPDKLKN_00011 12628 23 Skin 0.14 protein_coding synonymous_variant LOW 258C>T Leu86Leu
M0009082 BDPDKLKN_00011 12649 25 Skin 0.16 protein_coding synonymous_variant LOW 237T>G Val79Val
M0009083 BDPDKLKN_00011 12670 25 Skin 0.16 protein_coding synonymous_variant LOW 216C>T His72His
M0009084 BDPDKLKN_00011 12711 25 Skin 0.16 protein_coding missense_variant MODERATE 175A>G Ile59Val
M0009085 BDPDKLKN_00011 12718 3 Skin 0.02 protein_coding synonymous_variant LOW 168C>T Ala56Ala
M0009086 BDPDKLKN_00011 12727 25 Skin 0.16 protein_coding synonymous_variant LOW 159C>G Ala53Ala
M0009087 BDPDKLKN_00062 72810 3 Skin 0.02 protein_coding synonymous_variant LOW 150C>G Gly50Gly
M0009088 BDPDKLKN_00062 72840 3 Skin 0.02 protein_coding synonymous_variant LOW 180T>C Phe60Phe
M0009089 BDPDKLKN_00063 73183 3 Skin 0.02 protein_coding synonymous_variant LOW 51C>T Phe17Phe
M0009090 BDPDKLKN_00063 73195 3 Skin 0.02 protein_coding synonymous_variant LOW 63G>C Gly21Gly
M0009091 BDPDKLKN_00063 73300 4 Skin 0.03 protein_coding synonymous_variant LOW 168G>A Glu56Glu
M0009092 BDPDKLKN_00063 73462 3 Skin 0.02 protein_coding synonymous_variant LOW 330C>T Leu110Leu
M0009093 BDPDKLKN_00063 73504 3 Skin 0.02 protein_coding synonymous_variant LOW 372C>T Ala124Ala
M0009094 BDPDKLKN_00063 73552 3 Skin 0.02 protein_coding synonymous_variant LOW 420G>T Leu140Leu
M0009095 BDPDKLKN_00063 73570 4 Skin 0.03 protein_coding synonymous_variant LOW 438A>G Glu146Glu
M0009096 BDPDKLKN_00063 73742 3 Skin 0.02 protein_coding synonymous_variant LOW 610T>C Leu204Leu
M0009097 BDPDKLKN_00063 73777 3 Skin 0.02 protein_coding synonymous_variant LOW 645G>C Gly215Gly
M0009098 BDPDKLKN_00063 73903 3 Skin 0.02 protein_coding synonymous_variant LOW 771C>G Thr257Thr
M0009099 BDPDKLKN_00063 73909 3 Skin 0.02 protein_coding synonymous_variant LOW 777C>G Val259Val
M0009100 BDPDKLKN_00063 73918 3 Skin 0.02 protein_coding synonymous_variant LOW 786T>C Val262Val
M0009101 BDPDKLKN_00063 73936 3 Skin 0.02 protein_coding synonymous_variant LOW 804T>G Gly268Gly
M0009102 BDPDKLKN_00063 73963 3 Skin 0.02 protein_coding synonymous_variant LOW 831A>G Ala277Ala
M0009103 BDPDKLKN_00063 73981 3 Skin 0.02 protein_coding synonymous_variant LOW 849A>G Lys283Lys
M0009104 BDPDKLKN_00063 74086 3 Skin 0.02 protein_coding synonymous_variant LOW 954T>G Leu318Leu
M0009105 BDPDKLKN_00063 74087 3 Skin 0.02 protein_coding synonymous_variant LOW 955C>T Leu319Leu
M0009106 BDPDKLKN_00063 74092 3 Skin 0.02 protein_coding synonymous_variant LOW 960C>G Thr320Thr
M0009107 BDPDKLKN_00063 74095 3 Skin 0.02 protein_coding synonymous_variant LOW 963C>G Leu321Leu
M0009108 BDPDKLKN_00063 74161 3 Skin 0.02 protein_coding synonymous_variant LOW 1029G>C Pro343Pro
M0009109 BDPDKLKN_00063 74164 3 Skin 0.02 protein_coding synonymous_variant LOW 1032C>A Gly344Gly
M0009110 BDPDKLKN_00063 74290 3 Skin 0.02 protein_coding synonymous_variant LOW 1158A>G Val386Val
M0009111 BDPDKLKN_00064 74782 3 Skin 0.02 protein_coding synonymous_variant LOW 75C>G Ala25Ala
M0009112 BDPDKLKN_00065 76255 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -77C>G None
M0009113 BDPDKLKN_00066 76311 3 Skin 0.02 protein_coding synonymous_variant LOW 819T>C Val273Val
M0009114 BDPDKLKN_00016 17623 3 Skin 0.02 protein_coding synonymous_variant LOW 180A>G Ala60Ala
M0009115 BDPDKLKN_00016 17740 3 Skin 0.02 protein_coding synonymous_variant LOW 297C>A Gly99Gly
M0009116 BDPDKLKN_00016 18001 3 Skin 0.02 protein_coding synonymous_variant LOW 558C>G Arg186Arg
M0009117 BDPDKLKN_00016 18010 3 Skin 0.02 protein_coding synonymous_variant LOW 567C>T Asp189Asp
M0009118 BDPDKLKN_00017 20391 3 Skin 0.02 protein_coding synonymous_variant LOW 1350G>C Arg450Arg
M0009119 BDPDKLKN_00018 20472 4 Skin 0.03 protein_coding stop_gained HIGH 7C>T Arg3*
M0009120 BDPDKLKN_00019 21661 6 Skin 0.04 protein_coding synonymous_variant LOW 286T>C Leu96Leu
M0009121 BDPDKLKN_00019 22164 4 Skin 0.03 protein_coding synonymous_variant LOW 789T>C Ser263Ser
M0009122 BDPDKLKN_00019 22176 4 Skin 0.03 protein_coding synonymous_variant LOW 801T>C Asp267Asp
M0009123 BDPDKLKN_00020 22501 3 Skin 0.02 protein_coding synonymous_variant LOW 213C>T Tyr71Tyr
M0009124 BDPDKLKN_00020 22546 3 Skin 0.02 protein_coding synonymous_variant LOW 258C>G Ala86Ala
M0009125 BDPDKLKN_00020 22549 3 Skin 0.02 protein_coding synonymous_variant LOW 261C>G Gly87Gly
M0009126 BDPDKLKN_00020 22660 5 Skin 0.03 protein_coding synonymous_variant LOW 372T>G Thr124Thr
M0009127 BDPDKLKN_00020 22927 4 Skin 0.03 protein_coding synonymous_variant LOW 639T>C Gly213Gly
M0009128 BDPDKLKN_00022 23954 3 Skin 0.02 protein_coding synonymous_variant LOW 357G>C Pro119Pro
M0009129 BDPDKLKN_00029 31620 3 Skin 0.02 protein_coding synonymous_variant LOW 156T>C Thr52Thr
M0009130 BDPDKLKN_00029 31623 3 Skin 0.02 protein_coding synonymous_variant LOW 159G>A Ala53Ala
M0009131 BDPDKLKN_00030 32788 3 Skin 0.02 protein_coding synonymous_variant LOW 111C>G Gly37Gly
M0009132 BDPDKLKN_00006 5111 3 Skin 0.02 protein_coding synonymous_variant LOW 1245T>C Ile415Ile
M0009133 BDPDKLKN_00006 6236 4 Skin 0.03 protein_coding synonymous_variant LOW 120G>C Val40Val
M0009134 BDPDKLKN_00007 7907 5 Skin 0.03 protein_coding missense_variant MODERATE 1074G>T Glu358Asp
M0009135 BDPDKLKN_00012 14003 4 Skin 0.03 protein_coding synonymous_variant LOW 237C>T Ala79Ala
M0009136 BDPDKLKN_00012 14014 3 Skin 0.02 protein_coding missense_variant MODERATE 226C>G Pro76Ala
M0009137 BDPDKLKN_00015 16732 21 Skin 0.13 protein_coding missense_variant MODERATE 221T>C Val74Ala
M0009138 BDPDKLKN_00015 17198 19 Skin 0.12 protein_coding synonymous_variant LOW 687C>T His229His
M0009139 BDPDKLKN_00015 17210 20 Skin 0.13 protein_coding synonymous_variant LOW 699C>T Arg233Arg
M0009140 BDPDKLKN_00015 17211 20 Skin 0.13 protein_coding missense_variant MODERATE 700G>T Ala234Ser
M0009141 BDPDKLKN_00015 17237 19 Skin 0.12 protein_coding synonymous_variant LOW 726C>T Asn242Asn
M0009142 BDPDKLKN_00015 17264 20 Skin 0.13 protein_coding synonymous_variant LOW 753G>C Thr251Thr
M0009143 BDPDKLKN_00016 18223 3 Skin 0.02 protein_coding synonymous_variant LOW 780T>G Arg260Arg
M0009144 BDPDKLKN_00019 21726 3 Skin 0.02 protein_coding synonymous_variant LOW 351G>A Glu117Glu
M0009145 BDPDKLKN_00019 21743 3 Skin 0.02 protein_coding missense_variant MODERATE 368G>C Ser123Thr
M0009146 BDPDKLKN_00021 23049 5 Skin 0.03 protein_coding synonymous_variant LOW 105A>G Val35Val
M0009147 BDPDKLKN_00021 23109 5 Skin 0.03 protein_coding synonymous_variant LOW 165A>G Ala55Ala
M0009148 BDPDKLKN_00024 26153 17 Skin 0.11 protein_coding missense_variant MODERATE 788G>A Arg263His
M0009149 BDPDKLKN_00024 26157 18 Skin 0.11 protein_coding synonymous_variant LOW 792T>C His264His
M0009150 BDPDKLKN_00025 26464 19 Skin 0.12 protein_coding synonymous_variant LOW 96A>C Leu32Leu
M0009151 BDPDKLKN_00025 27061 3 Skin 0.02 protein_coding synonymous_variant LOW 693C>G Ala231Ala
M0009152 BDPDKLKN_00025 27121 3 Skin 0.02 protein_coding synonymous_variant LOW 753C>A Ala251Ala
M0009153 BDPDKLKN_00025 27154 3 Skin 0.02 protein_coding synonymous_variant LOW 786T>G Ser262Ser
M0009154 BDPDKLKN_00025 27412 4 Skin 0.03 protein_coding synonymous_variant LOW 1044G>A Gln348Gln
M0009155 BDPDKLKN_00025 27415 4 Skin 0.03 protein_coding synonymous_variant LOW 1047G>C Pro349Pro
M0009156 BDPDKLKN_00028 30710 10 Skin 0.06 protein_coding synonymous_variant LOW 615G>C Ala205Ala
M0009157 BDPDKLKN_00028 30746 10 Skin 0.06 protein_coding synonymous_variant LOW 651C>G Ala217Ala
M0009158 BDPDKLKN_00029 31594 8 Skin 0.05 protein_coding missense_variant MODERATE 130T>C Ser44Pro
M0009159 BDPDKLKN_00034 36788 5 Skin 0.03 protein_coding synonymous_variant LOW 792C>T Arg264Arg
M0009160 BDPDKLKN_00036 40387 3 Skin 0.02 protein_coding synonymous_variant LOW 2160C>T Tyr720Tyr
M0009161 BDPDKLKN_00036 40690 3 Skin 0.02 protein_coding synonymous_variant LOW 1857A>G Ala619Ala
M0009162 BDPDKLKN_00058 72618 4 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4626C>G None
M0009163 BDPDKLKN_00057 66032 3 Skin 0.02 protein_coding synonymous_variant LOW 258G>A Gln86Gln
M0009164 BDPDKLKN_00057 66068 3 Skin 0.02 protein_coding synonymous_variant LOW 294T>C Asp98Asp
M0009165 BDPDKLKN_00057 66092 3 Skin 0.02 protein_coding synonymous_variant LOW 318T>C Asp106Asp
M0009166 BDPDKLKN_00057 66131 3 Skin 0.02 protein_coding synonymous_variant LOW 357T>C Ile119Ile
M0009167 BDPDKLKN_00057 66167 3 Skin 0.02 protein_coding synonymous_variant LOW 393G>C Val131Val
M0009168 BDPDKLKN_00057 66240 3 Skin 0.02 protein_coding missense_variant MODERATE 466G>A Val156Ile
M0009169 BDPDKLKN_00058 67849 11 Skin 0.07 protein_coding synonymous_variant LOW 144C>T Thr48Thr
M0009170 BDPDKLKN_00060 70422 4 Skin 0.03 protein_coding synonymous_variant LOW 354A>C Ala118Ala
M0009171 BDPDKLKN_00060 70458 4 Skin 0.03 protein_coding synonymous_variant LOW 390T>C Arg130Arg
M0009172 BDPDKLKN_00050 58723 6 Skin 0.04 protein_coding synonymous_variant LOW 327G>C Thr109Thr
M0009173 BDPDKLKN_00050 58780 6 Skin 0.04 protein_coding synonymous_variant LOW 270T>C Ile90Ile
M0009174 BDPDKLKN_00050 58792 6 Skin 0.04 protein_coding synonymous_variant LOW 258C>G Val86Val
M0009175 BDPDKLKN_00050 58831 6 Skin 0.04 protein_coding synonymous_variant LOW 219C>G Arg73Arg
M0009176 BDPDKLKN_00050 58834 6 Skin 0.04 protein_coding synonymous_variant LOW 216A>G Gly72Gly
M0009177 BDPDKLKN_00050 58837 6 Skin 0.04 protein_coding synonymous_variant LOW 213T>C Pro71Pro
M0009178 BDPDKLKN_00016 17808 5 Skin 0.03 protein_coding missense_variant MODERATE 365G>A Arg122Gln
M0009179 BDPDKLKN_00056 65451 3 Skin 0.02 protein_coding synonymous_variant LOW 63G>C Gly21Gly
M0009180 BDPDKLKN_00057 66303 3 Skin 0.02 protein_coding missense_variant MODERATE 529C>A Arg177Ser
M0009181 BDPDKLKN_00058 66844 4 Skin 0.03 protein_coding missense_variant MODERATE 1149C>G Asp383Glu
M0009182 BDPDKLKN_00059 69040 4 Skin 0.03 protein_coding synonymous_variant LOW 858G>C Ala286Ala
M0009183 BDPDKLKN_00059 69088 4 Skin 0.03 protein_coding synonymous_variant LOW 906C>T Asp302Asp
M0009184 BDPDKLKN_00060 70203 3 Skin 0.02 protein_coding synonymous_variant LOW 135C>G Pro45Pro
M0009185 BDPDKLKN_00060 70209 4 Skin 0.03 protein_coding synonymous_variant LOW 141T>C Phe47Phe
M0009186 BDPDKLKN_00060 70263 3 Skin 0.02 protein_coding synonymous_variant LOW 195C>T Leu65Leu
M0009187 BDPDKLKN_00060 70299 3 Skin 0.02 protein_coding synonymous_variant LOW 231A>C Pro77Pro
M0009188 BDPDKLKN_00060 70317 3 Skin 0.02 protein_coding synonymous_variant LOW 249T>C Gly83Gly
M0009189 BDPDKLKN_00061 72444 3 Skin 0.02 protein_coding synonymous_variant LOW 825G>C Ala275Ala
M0009190 BDPDKLKN_00061 72528 4 Skin 0.03 protein_coding synonymous_variant LOW 909G>A Ala303Ala
M0009191 BDPDKLKN_00061 72135 5 Skin 0.03 protein_coding synonymous_variant LOW 516A>G Ala172Ala
M0009192 BDPDKLKN_00012 13460 3 Skin 0.02 protein_coding missense_variant MODERATE 780C>G Ile260Met
M0009193 BDPDKLKN_00012 13462 3 Skin 0.02 protein_coding missense_variant MODERATE 778A>C Ile260Leu
M0009194 BDPDKLKN_00012 13474 3 Skin 0.02 protein_coding missense_variant MODERATE 766C>G Gln256Glu
M0009195 BDPDKLKN_00012 13535 4 Skin 0.03 protein_coding synonymous_variant LOW 705T>C Asn235Asn
M0009196 BDPDKLKN_00006 6026 3 Skin 0.02 protein_coding synonymous_variant LOW 330T>C Asp110Asp
M0009197 BDPDKLKN_00007 6983 4 Skin 0.03 protein_coding synonymous_variant LOW 1998A>T Val666Val
M0009198 BDPDKLKN_00007 6995 4 Skin 0.03 protein_coding synonymous_variant LOW 1986A>G Gly662Gly
M0009199 BDPDKLKN_00007 7190 4 Skin 0.03 protein_coding synonymous_variant LOW 1791C>G Leu597Leu
M0009200 BDPDKLKN_00007 7823 4 Skin 0.03 protein_coding synonymous_variant LOW 1158T>G Arg386Arg
M0009201 BDPDKLKN_00027 28717 3 Skin 0.02 protein_coding missense_variant MODERATE 84T>A Phe28Leu
M0009202 BDPDKLKN_00026 27764 3 Skin 0.02 protein_coding synonymous_variant LOW 210G>A Glu70Glu
M0009203 BDPDKLKN_00026 27785 3 Skin 0.02 protein_coding synonymous_variant LOW 231T>C Asp77Asp
M0009204 BDPDKLKN_00049 54964 3 Skin 0.02 protein_coding synonymous_variant LOW 2604G>C Ala868Ala
M0009205 BDPDKLKN_00057 65795 3 Skin 0.02 protein_coding synonymous_variant LOW 21A>C Pro7Pro
M0009206 BDPDKLKN_00057 65804 3 Skin 0.02 protein_coding synonymous_variant LOW 30C>G Thr10Thr
M0009207 BDPDKLKN_00057 65897 3 Skin 0.02 protein_coding synonymous_variant LOW 123C>G Arg41Arg
M0009208 BDPDKLKN_00057 65933 3 Skin 0.02 protein_coding synonymous_variant LOW 159C>G Leu53Leu
M0009209 BDPDKLKN_00058 67271 3 Skin 0.02 protein_coding missense_variant MODERATE 722C>T Ala241Val
M0009210 BDPDKLKN_00012 13712 4 Skin 0.03 protein_coding synonymous_variant LOW 528T>C Pro176Pro
M0009211 BDPDKLKN_00007 8409 4 Skin 0.03 protein_coding missense_variant MODERATE 572G>A Arg191His
M0009212 BDPDKLKN_00020 22705 4 Skin 0.03 protein_coding synonymous_variant LOW 417G>C Pro139Pro
M0009213 BDPDKLKN_00020 22756 3 Skin 0.02 protein_coding synonymous_variant LOW 468T>C Thr156Thr
M0009214 BDPDKLKN_00022 23932 3 Skin 0.02 protein_coding missense_variant MODERATE 335C>A Ala112Asp
M0009215 BDPDKLKN_00013 14667 3 Skin 0.02 protein_coding missense_variant MODERATE 775A>T Met259Leu
M0009216 BDPDKLKN_00013 14690 3 Skin 0.02 protein_coding missense_variant MODERATE 752T>C Val251Ala
M0009217 BDPDKLKN_00013 14719 3 Skin 0.02 protein_coding synonymous_variant LOW 723C>G Thr241Thr
M0009218 BDPDKLKN_00069 80376 3 Skin 0.02 protein_coding synonymous_variant LOW 585T>C Ala195Ala
M0009219 BDPDKLKN_00071 82560 3 Skin 0.02 protein_coding synonymous_variant LOW 2007G>C Ser669Ser
M0009220 BDPDKLKN_00006 6296 3 Skin 0.02 protein_coding synonymous_variant LOW 60G>C Gly20Gly
M0009221 BDPDKLKN_00007 6809 3 Skin 0.02 protein_coding synonymous_variant LOW 2172G>C Gly724Gly
M0009222 BDPDKLKN_00007 6935 3 Skin 0.02 protein_coding synonymous_variant LOW 2046T>C Gly682Gly
M0009223 BDPDKLKN_00007 7949 5 Skin 0.03 protein_coding synonymous_variant LOW 1032T>C Arg344Arg
M0009224 BDPDKLKN_00007 7967 5 Skin 0.03 protein_coding synonymous_variant LOW 1014T>C Asp338Asp
M0009225 BDPDKLKN_00007 8006 5 Skin 0.03 protein_coding synonymous_variant LOW 975C>T His325His
M0009226 BDPDKLKN_00007 8047 3 Skin 0.02 protein_coding missense_variant MODERATE 934C>G Pro312Ala
M0009227 BDPDKLKN_00007 8054 5 Skin 0.03 protein_coding synonymous_variant LOW 927C>T Asp309Asp
M0009228 BDPDKLKN_00007 8077 5 Skin 0.03 protein_coding missense_variant MODERATE 904G>A Gly302Ser
M0009229 BDPDKLKN_00025 26971 3 Skin 0.02 protein_coding synonymous_variant LOW 603T>C Tyr201Tyr
M0009230 BDPDKLKN_00025 27004 3 Skin 0.02 protein_coding synonymous_variant LOW 636T>C Gly212Gly
M0009231 BDPDKLKN_00012 14093 4 Skin 0.03 protein_coding synonymous_variant LOW 147G>C Thr49Thr
M0009232 BDPDKLKN_00012 14114 4 Skin 0.03 protein_coding synonymous_variant LOW 126A>C Ala42Ala
M0009233 BDPDKLKN_00013 15232 4 Skin 0.03 protein_coding synonymous_variant LOW 210G>C Arg70Arg
M0009234 BDPDKLKN_00024 25954 3 Skin 0.02 protein_coding missense_variant MODERATE 589A>G Thr197Ala
M0009235 BDPDKLKN_00026 28397 3 Skin 0.02 protein_coding synonymous_variant LOW 843T>C Phe281Phe
M0009236 BDPDKLKN_00027 29440 3 Skin 0.02 protein_coding synonymous_variant LOW 807T>C Asp269Asp
M0009237 BDPDKLKN_00027 29443 3 Skin 0.02 protein_coding synonymous_variant LOW 810G>C Leu270Leu
M0009238 BDPDKLKN_00027 29446 3 Skin 0.02 protein_coding synonymous_variant LOW 813C>T Asp271Asp
M0009239 BDPDKLKN_00027 30022 3 Skin 0.02 protein_coding synonymous_variant LOW 1389G>C Gly463Gly
M0009240 BDPDKLKN_00027 30058 3 Skin 0.02 protein_coding synonymous_variant LOW 1425G>A Lys475Lys
M0009241 BDPDKLKN_00069 80832 3 Skin 0.02 protein_coding synonymous_variant LOW 129G>C Ser43Ser
M0009242 BDPDKLKN_00013 14872 4 Skin 0.03 protein_coding synonymous_variant LOW 570G>C Arg190Arg
M0009243 BDPDKLKN_00013 14884 4 Skin 0.03 protein_coding synonymous_variant LOW 558T>C Tyr186Tyr
M0009244 BDPDKLKN_00013 15334 3 Skin 0.02 protein_coding synonymous_variant LOW 108C>A Ala36Ala
M0009245 BDPDKLKN_00007 7952 4 Skin 0.03 protein_coding synonymous_variant LOW 1029T>C Asp343Asp
M0009246 BDPDKLKN_00007 8510 4 Skin 0.03 protein_coding synonymous_variant LOW 471C>T Gly157Gly
M0009247 BDPDKLKN_00007 8561 4 Skin 0.03 protein_coding synonymous_variant LOW 420A>G Thr140Thr
M0009248 BDPDKLKN_00007 8579 3 Skin 0.02 protein_coding synonymous_variant LOW 402C>G Ala134Ala
M0009249 BDPDKLKN_00007 8606 4 Skin 0.03 protein_coding synonymous_variant LOW 375C>G Ala125Ala
M0009250 BDPDKLKN_00007 8609 3 Skin 0.02 protein_coding synonymous_variant LOW 372T>G Ala124Ala
M0009251 BDPDKLKN_00007 8612 3 Skin 0.02 protein_coding synonymous_variant LOW 369G>C Gly123Gly
M0009252 BDPDKLKN_00007 8632 4 Skin 0.03 protein_coding synonymous_variant LOW 349T>C Leu117Leu
M0009253 BDPDKLKN_00008 9669 3 Skin 0.02 protein_coding synonymous_variant LOW 150C>G Gly50Gly
M0009254 BDPDKLKN_00012 12992 4 Skin 0.03 protein_coding synonymous_variant LOW 1248T>G Ala416Ala
M0009255 BDPDKLKN_00012 13002 4 Skin 0.03 protein_coding missense_variant MODERATE 1238T>A Phe413Tyr
M0009256 BDPDKLKN_00012 13034 3 Skin 0.02 protein_coding synonymous_variant LOW 1206G>C Leu402Leu
M0009257 BDPDKLKN_00012 13061 4 Skin 0.03 protein_coding synonymous_variant LOW 1179C>T Val393Val
M0009258 BDPDKLKN_00012 13118 3 Skin 0.02 protein_coding synonymous_variant LOW 1122T>C Asp374Asp
M0009259 BDPDKLKN_00012 13127 3 Skin 0.02 protein_coding synonymous_variant LOW 1113T>C Gly371Gly
M0009260 BDPDKLKN_00012 13235 3 Skin 0.02 protein_coding synonymous_variant LOW 1005G>C Thr335Thr
M0009261 BDPDKLKN_00007 8450 3 Skin 0.02 protein_coding synonymous_variant LOW 531C>T Ile177Ile
M0009262 BDPDKLKN_00012 13619 3 Skin 0.02 protein_coding synonymous_variant LOW 621T>G Ser207Ser
M0009263 BDPDKLKN_00012 13643 4 Skin 0.03 protein_coding synonymous_variant LOW 597C>T His199His
M0009264 BDPDKLKN_00012 14087 3 Skin 0.02 protein_coding synonymous_variant LOW 153C>G Ala51Ala
M0009265 BDPDKLKN_00013 14353 4 Skin 0.03 protein_coding synonymous_variant LOW 1089C>T Phe363Phe
M0009266 BDPDKLKN_00013 14386 4 Skin 0.03 protein_coding missense_variant MODERATE 1056A>C Glu352Asp
M0009267 BDPDKLKN_00013 14404 4 Skin 0.03 protein_coding synonymous_variant LOW 1038A>G Ala346Ala
M0009268 BDPDKLKN_00013 14416 3 Skin 0.02 protein_coding synonymous_variant LOW 1026T>C Ser342Ser
M0009269 BDPDKLKN_00013 14448 4 Skin 0.03 protein_coding missense_variant MODERATE 994A>G Thr332Ala
M0009270 BDPDKLKN_00013 15154 3 Skin 0.02 protein_coding synonymous_variant LOW 288A>G Pro96Pro
M0009271 BDPDKLKN_00020 22801 3 Skin 0.02 protein_coding synonymous_variant LOW 513T>C Gly171Gly
M0009272 BDPDKLKN_00029 31687 3 Skin 0.02 protein_coding missense_variant MODERATE 223A>G Lys75Glu
M0009273 BDPDKLKN_00029 31688 3 Skin 0.02 protein_coding missense_variant MODERATE 224A>G Lys75Arg
M0009274 BDPDKLKN_00013 14929 3 Skin 0.02 protein_coding synonymous_variant LOW 513T>G Ala171Ala
M0009275 BDPDKLKN_00013 14932 3 Skin 0.02 protein_coding synonymous_variant LOW 510G>C Leu170Leu
M0009276 BDPDKLKN_00013 14938 3 Skin 0.02 protein_coding synonymous_variant LOW 504C>G Ala168Ala
M0009277 BDPDKLKN_00013 14939 3 Skin 0.02 protein_coding missense_variant MODERATE 503C>G Ala168Gly
M0009278 BDPDKLKN_00013 14959 3 Skin 0.02 protein_coding synonymous_variant LOW 483C>G Thr161Thr
M0009279 BDPDKLKN_00013 14961 3 Skin 0.02 protein_coding missense_variant MODERATE 481A>G Thr161Ala
M0009280 BDPDKLKN_00013 14962 3 Skin 0.02 protein_coding synonymous_variant LOW 480C>G Gly160Gly
M0009281 BDPDKLKN_00013 14971 3 Skin 0.02 protein_coding synonymous_variant LOW 471T>C Ile157Ile
M0009282 BDPDKLKN_00004 3802 3 Skin 0.02 protein_coding synonymous_variant LOW 234G>C Thr78Thr
M0009283 BDPDKLKN_00022 24002 3 Skin 0.02 protein_coding synonymous_variant LOW 405G>C Arg135Arg
M0009284 BDPDKLKN_00022 24006 3 Skin 0.02 protein_coding synonymous_variant LOW 409T>C Leu137Leu






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
BDPDKLKN_00009 QWK92510.1|GH105 82.8 2.03e-223 1 366 0.9892 0.9892





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
BDPDKLKN_00049 2.A.6.2.3 72.5 0 1 1066 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily