Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1639
  Reference Plasmid   1111525849483071_bin.26__k141_285273
  Reference Plasmid Size   5735
  Reference Plasmid GC Content   0.44
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0009288 AILKEHJI_00001 1278 6 Skin 0.15 protein_coding synonymous_variant LOW 51C>T Asp17Asp
M0009289 AILKEHJI_00001 1314 20 Skin 0.50 protein_coding synonymous_variant LOW 15G>A Gln5Gln
M0009290 AILKEHJI_00001 1319 17 Skin 0.43 protein_coding missense_variant MODERATE 10A>G Asn4Asp
M0009291 AILKEHJI_00002 1504 11 Skin 0.28 protein_coding synonymous_variant LOW 396C>T Arg132Arg
M0009292 AILKEHJI_00002 1516 3 Skin 0.08 protein_coding synonymous_variant LOW 384T>C Leu128Leu
M0009293 AILKEHJI_00002 1552 10 Skin 0.25 protein_coding synonymous_variant LOW 348T>C Ile116Ile
M0009294 AILKEHJI_00002 1556 9 Skin 0.23 protein_coding missense_variant MODERATE 344G>A Gly115Asp
M0009295 AILKEHJI_00002 1604 13 Skin 0.33 protein_coding missense_variant MODERATE 296C>A Thr99Asn
M0009296 AILKEHJI_00002 1609 13 Skin 0.33 protein_coding synonymous_variant LOW 291A>G Gln97Gln
M0009297 AILKEHJI_00002 1614 13 Skin 0.33 protein_coding missense_variant MODERATE 286A>C Lys96Gln
M0009298 AILKEHJI_00002 1620 5 Skin 0.13 protein_coding missense_variant MODERATE 280A>G Thr94Ala
M0009299 AILKEHJI_00002 1724 3 Skin 0.08 protein_coding missense_variant MODERATE 176T>G Val59Gly
M0009300 AILKEHJI_00002 1741 13 Skin 0.33 protein_coding synonymous_variant LOW 159T>C Asn53Asn
M0009301 AILKEHJI_00002 1777 3 Skin 0.08 protein_coding missense_variant MODERATE 123T>G Asp41Glu
M0009302 AILKEHJI_00002 1782 3 Skin 0.08 protein_coding missense_variant MODERATE 118T>G Ser40Ala
M0009303 AILKEHJI_00001 1994 20 Skin 0.50 protein_coding upstream_gene_variant MODIFIER -666A>G None
M0009304 AILKEHJI_00001 2014 9 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -686A>G None
M0009305 AILKEHJI_00001 2029 5 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -701G>T None
M0009306 AILKEHJI_00001 2051 15 Skin 0.38 protein_coding upstream_gene_variant MODIFIER -723T>C None
M0009307 AILKEHJI_00001 2054 5 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -726T>C None
M0009308 AILKEHJI_00003 2120 8 Skin 0.20 protein_coding missense_variant MODERATE 254A>C Asp85Ala
M0009309 AILKEHJI_00003 2121 8 Skin 0.20 protein_coding missense_variant MODERATE 253G>A Asp85Asn
M0009310 AILKEHJI_00003 2125 8 Skin 0.20 protein_coding synonymous_variant LOW 249T>C Phe83Phe
M0009311 AILKEHJI_00003 2146 22 Skin 0.55 protein_coding synonymous_variant LOW 228C>T Asp76Asp
M0009312 AILKEHJI_00003 2169 23 Skin 0.58 protein_coding missense_variant MODERATE 205G>A Ala69Thr
M0009313 AILKEHJI_00003 2281 21 Skin 0.53 protein_coding synonymous_variant LOW 93A>C Thr31Thr
M0009314 AILKEHJI_00003 2283 21 Skin 0.53 protein_coding missense_variant MODERATE 91A>G Thr31Ala
M0009315 AILKEHJI_00003 2305 19 Skin 0.48 protein_coding synonymous_variant LOW 69C>T Asn23Asn
M0009316 AILKEHJI_00003 2326 23 Skin 0.58 protein_coding synonymous_variant LOW 48A>G Pro16Pro
M0009317 AILKEHJI_00001 2389 14 Skin 0.35 protein_coding upstream_gene_variant MODIFIER -1061T>C None
M0009318 AILKEHJI_00001 2393 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1065G>A None
M0009319 AILKEHJI_00001 2425 18 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1097G>A None
M0009320 AILKEHJI_00001 2447 18 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -1119G>A None
M0009321 AILKEHJI_00004 2532 8 Skin 0.20 protein_coding synonymous_variant LOW 660A>T Arg220Arg
M0009322 AILKEHJI_00004 2537 8 Skin 0.20 protein_coding synonymous_variant LOW 655T>C Leu219Leu
M0009323 AILKEHJI_00004 2595 22 Skin 0.55 protein_coding synonymous_variant LOW 597A>G Val199Val
M0009324 AILKEHJI_00004 2598 22 Skin 0.55 protein_coding synonymous_variant LOW 594T>C Thr198Thr
M0009325 AILKEHJI_00004 2601 7 Skin 0.18 protein_coding synonymous_variant LOW 591G>A Leu197Leu
M0009326 AILKEHJI_00004 2619 22 Skin 0.55 protein_coding synonymous_variant LOW 573C>G Leu191Leu
M0009327 AILKEHJI_00004 2644 6 Skin 0.15 protein_coding missense_variant MODERATE 548A>C Glu183Ala
M0009328 AILKEHJI_00004 2679 19 Skin 0.48 protein_coding missense_variant MODERATE 513C>A His171Gln
M0009329 AILKEHJI_00004 2691 4 Skin 0.10 protein_coding synonymous_variant LOW 501T>C Gly167Gly
M0009330 AILKEHJI_00004 2703 5 Skin 0.13 protein_coding synonymous_variant LOW 489A>C Ala163Ala
M0009331 AILKEHJI_00004 2727 7 Skin 0.18 protein_coding missense_variant MODERATE 465C>A Asn155Lys
M0009332 AILKEHJI_00004 2740 3 Skin 0.08 protein_coding missense_variant MODERATE 452C>A Ala151Glu
M0009333 AILKEHJI_00004 2781 3 Skin 0.08 protein_coding synonymous_variant LOW 411C>G Val137Val
M0009334 AILKEHJI_00004 2817 4 Skin 0.10 protein_coding synonymous_variant LOW 375A>G Thr125Thr
M0009335 AILKEHJI_00004 2889 31 Skin 0.78 protein_coding synonymous_variant LOW 303T>C Ser101Ser
M0009336 AILKEHJI_00004 3018 4 Skin 0.10 protein_coding synonymous_variant LOW 174C>A Thr58Thr
M0009337 AILKEHJI_00004 3027 29 Skin 0.73 protein_coding synonymous_variant LOW 165C>T Ile55Ile
M0009338 AILKEHJI_00004 3081 5 Skin 0.13 protein_coding synonymous_variant LOW 111C>A Val37Val
M0009339 AILKEHJI_00004 3144 4 Skin 0.10 protein_coding synonymous_variant LOW 48T>C Gly16Gly
M0009340 AILKEHJI_00004 3147 4 Skin 0.10 protein_coding synonymous_variant LOW 45A>T Ser15Ser
M0009341 AILKEHJI_00004 3162 3 Skin 0.08 protein_coding synonymous_variant LOW 30T>C Ala10Ala
M0009342 AILKEHJI_00001 3235 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -1907C>T None
M0009343 AILKEHJI_00001 3236 7 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -1908G>C None
M0009344 AILKEHJI_00005 3481 7 Skin 0.18 protein_coding missense_variant MODERATE 12T>A His4Gln
M0009345 AILKEHJI_00005 3533 18 Skin 0.45 protein_coding missense_variant MODERATE 64C>A Leu22Met
M0009346 AILKEHJI_00005 3539 20 Skin 0.50 protein_coding synonymous_variant LOW 70T>C Leu24Leu
M0009347 AILKEHJI_00005 3542 6 Skin 0.15 protein_coding missense_variant MODERATE 73A>G Thr25Ala
M0009348 AILKEHJI_00005 3557 19 Skin 0.48 protein_coding missense_variant MODERATE 88G>A Ala30Thr
M0009349 AILKEHJI_00005 3573 19 Skin 0.48 protein_coding missense_variant MODERATE 104C>A Thr35Lys
M0009350 AILKEHJI_00005 3598 6 Skin 0.15 protein_coding synonymous_variant LOW 129T>C Ile43Ile
M0009351 AILKEHJI_00005 3600 15 Skin 0.38 protein_coding missense_variant MODERATE 131A>C His44Pro
M0009352 AILKEHJI_00005 3601 15 Skin 0.38 protein_coding synonymous_variant LOW 132C>T His44His
M0009353 AILKEHJI_00005 3611 17 Skin 0.43 protein_coding missense_variant MODERATE 142C>G Pro48Ala
M0009354 AILKEHJI_00005 3614 8 Skin 0.20 protein_coding missense_variant MODERATE 145G>A Ala49Thr
M0009355 AILKEHJI_00005 3620 15 Skin 0.38 protein_coding missense_variant MODERATE 151G>C Glu51Gln
M0009356 AILKEHJI_00005 3623 15 Skin 0.38 protein_coding missense_variant MODERATE 154A>G Thr52Ala
M0009357 AILKEHJI_00005 3641 16 Skin 0.40 protein_coding missense_variant MODERATE 172G>A Ala58Thr
M0009358 AILKEHJI_00005 3652 22 Skin 0.55 protein_coding synonymous_variant LOW 183A>G Thr61Thr
M0009359 AILKEHJI_00005 3658 7 Skin 0.18 protein_coding synonymous_variant LOW 189G>A Pro63Pro
M0009360 AILKEHJI_00005 3670 7 Skin 0.18 protein_coding synonymous_variant LOW 201G>A Ala67Ala
M0009361 AILKEHJI_00005 3685 25 Skin 0.63 protein_coding synonymous_variant LOW 216T>C Ala72Ala
M0009362 AILKEHJI_00005 3748 7 Skin 0.18 protein_coding synonymous_variant LOW 279A>G Pro93Pro
M0009363 AILKEHJI_00005 3784 8 Skin 0.20 protein_coding synonymous_variant LOW 315G>T Gly105Gly
M0009364 AILKEHJI_00005 3799 14 Skin 0.35 protein_coding synonymous_variant LOW 330G>T Pro110Pro
M0009365 AILKEHJI_00005 3807 8 Skin 0.20 protein_coding missense_variant MODERATE 338T>C Val113Ala
M0009366 AILKEHJI_00005 3892 8 Skin 0.20 protein_coding synonymous_variant LOW 423A>G Pro141Pro
M0009367 AILKEHJI_00005 3913 10 Skin 0.25 protein_coding synonymous_variant LOW 444G>A Leu148Leu
M0009368 AILKEHJI_00005 4006 29 Skin 0.73 protein_coding synonymous_variant LOW 537G>A Leu179Leu
M0009369 AILKEHJI_00005 4009 29 Skin 0.73 protein_coding synonymous_variant LOW 540A>C Ala180Ala
M0009370 AILKEHJI_00005 4015 25 Skin 0.63 protein_coding synonymous_variant LOW 546C>T Ile182Ile
M0009371 AILKEHJI_00005 4034 9 Skin 0.23 protein_coding missense_variant MODERATE 565A>C Asn189His
M0009372 AILKEHJI_00005 4042 23 Skin 0.58 protein_coding synonymous_variant LOW 573T>G Arg191Arg
M0009373 AILKEHJI_00005 4079 26 Skin 0.65 protein_coding synonymous_variant LOW 610C>T Leu204Leu
M0009374 AILKEHJI_00005 4085 26 Skin 0.65 protein_coding missense_variant MODERATE 616A>G Asn206Asp
M0009375 AILKEHJI_00005 4276 7 Skin 0.18 protein_coding synonymous_variant LOW 807A>C Thr269Thr
M0009376 AILKEHJI_00002 1828 12 Skin 0.30 protein_coding synonymous_variant LOW 72G>A Pro24Pro
M0009377 AILKEHJI_00002 1840 17 Skin 0.43 protein_coding synonymous_variant LOW 60T>C Ser20Ser
M0009378 AILKEHJI_00002 1842 17 Skin 0.43 protein_coding missense_variant MODERATE 58T>A Ser20Thr
M0009379 AILKEHJI_00001 1989 14 Skin 0.35 protein_coding upstream_gene_variant MODIFIER -661C>T None
M0009380 AILKEHJI_00001 2015 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -687A>C None
M0009381 AILKEHJI_00003 2248 14 Skin 0.35 protein_coding synonymous_variant LOW 126C>T Ala42Ala
M0009382 AILKEHJI_00003 2282 11 Skin 0.28 protein_coding missense_variant MODERATE 92C>T Thr31Ile
M0009383 AILKEHJI_00001 2398 12 Skin 0.30 protein_coding upstream_gene_variant MODIFIER -1070C>T None
M0009384 AILKEHJI_00004 2559 16 Skin 0.40 protein_coding synonymous_variant LOW 633C>T Cys211Cys
M0009385 AILKEHJI_00004 2604 15 Skin 0.38 protein_coding synonymous_variant LOW 588A>T Ala196Ala
M0009386 AILKEHJI_00004 2910 14 Skin 0.35 protein_coding synonymous_variant LOW 282C>T Ser94Ser
M0009387 AILKEHJI_00001 3194 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1866T>C None
M0009388 AILKEHJI_00001 3213 27 Skin 0.68 protein_coding upstream_gene_variant MODIFIER -1885T>C None
M0009389 AILKEHJI_00001 3215 27 Skin 0.68 protein_coding upstream_gene_variant MODIFIER -1887G>A None
M0009390 AILKEHJI_00005 3490 9 Skin 0.23 protein_coding missense_variant MODERATE 21G>T Leu7Phe
M0009391 AILKEHJI_00005 3491 8 Skin 0.20 protein_coding missense_variant MODERATE 22A>G Ile8Val
M0009392 AILKEHJI_00005 3585 5 Skin 0.13 protein_coding missense_variant MODERATE 116A>G Asn39Ser
M0009393 AILKEHJI_00005 4126 16 Skin 0.40 protein_coding synonymous_variant LOW 657C>T Phe219Phe
M0009394 AILKEHJI_00006 4629 35 Skin 0.88 protein_coding synonymous_variant LOW 219C>G Thr73Thr
M0009395 AILKEHJI_00001 4748 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3420G>A None
M0009396 AILKEHJI_00001 4755 11 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3427C>A None
M0009397 AILKEHJI_00001 4757 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3429G>C None
M0009398 AILKEHJI_00007 4801 14 Skin 0.35 protein_coding synonymous_variant LOW 738C>T Arg246Arg
M0009399 AILKEHJI_00002 1764 9 Skin 0.23 protein_coding missense_variant MODERATE 136G>T Val46Leu
M0009400 AILKEHJI_00002 1864 4 Skin 0.10 protein_coding synonymous_variant LOW 36T>G Val12Val
M0009401 AILKEHJI_00002 1867 4 Skin 0.10 protein_coding synonymous_variant LOW 33G>T Thr11Thr
M0009402 AILKEHJI_00002 1868 4 Skin 0.10 protein_coding missense_variant MODERATE 32C>T Thr11Met
M0009403 AILKEHJI_00002 1870 5 Skin 0.13 protein_coding synonymous_variant LOW 30G>C Thr10Thr
M0009404 AILKEHJI_00001 1911 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -583G>T None
M0009405 AILKEHJI_00001 1914 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -586A>G None
M0009406 AILKEHJI_00003 2110 4 Skin 0.10 protein_coding synonymous_variant LOW 264G>T Ala88Ala
M0009407 AILKEHJI_00003 2311 3 Skin 0.08 protein_coding synonymous_variant LOW 63C>T Ala21Ala
M0009408 AILKEHJI_00004 2748 4 Skin 0.10 protein_coding synonymous_variant LOW 444A>G Glu148Glu
M0009409 AILKEHJI_00004 2793 3 Skin 0.08 protein_coding synonymous_variant LOW 399C>T Gly133Gly
M0009410 AILKEHJI_00004 2820 3 Skin 0.08 protein_coding synonymous_variant LOW 372A>G Val124Val
M0009411 AILKEHJI_00004 2868 4 Skin 0.10 protein_coding synonymous_variant LOW 324C>T Pro108Pro
M0009412 AILKEHJI_00001 3257 5 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -1929C>A None
M0009413 AILKEHJI_00001 3261 8 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -1933G>T None
M0009414 AILKEHJI_00001 3267 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -1939C>T None
M0009415 AILKEHJI_00001 3299 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1971T>C None
M0009416 AILKEHJI_00005 3565 12 Skin 0.30 protein_coding synonymous_variant LOW 96G>A Ser32Ser
M0009417 AILKEHJI_00005 3566 13 Skin 0.33 protein_coding missense_variant MODERATE 97G>A Ala33Thr
M0009418 AILKEHJI_00005 3629 14 Skin 0.35 protein_coding missense_variant MODERATE 160A>T Thr54Ser
M0009419 AILKEHJI_00005 3836 8 Skin 0.20 protein_coding missense_variant MODERATE 367G>A Ala123Thr
M0009420 AILKEHJI_00005 4132 8 Skin 0.20 protein_coding synonymous_variant LOW 663G>A Thr221Thr
M0009421 AILKEHJI_00005 4135 8 Skin 0.20 protein_coding synonymous_variant LOW 666C>G Pro222Pro
M0009422 AILKEHJI_00005 4159 10 Skin 0.25 protein_coding synonymous_variant LOW 690C>T Arg230Arg
M0009423 AILKEHJI_00005 4163 10 Skin 0.25 protein_coding synonymous_variant LOW 694T>C Leu232Leu
M0009424 AILKEHJI_00005 4168 10 Skin 0.25 protein_coding synonymous_variant LOW 699A>G Val233Val
M0009425 AILKEHJI_00005 4171 10 Skin 0.25 protein_coding synonymous_variant LOW 702C>A Pro234Pro
M0009426 AILKEHJI_00005 4196 9 Skin 0.23 protein_coding synonymous_variant LOW 727T>C Leu243Leu
M0009427 AILKEHJI_00005 4217 11 Skin 0.28 protein_coding missense_variant MODERATE 748C>A Leu250Met
M0009428 AILKEHJI_00005 4219 11 Skin 0.28 protein_coding synonymous_variant LOW 750G>A Leu250Leu
M0009429 AILKEHJI_00005 4288 6 Skin 0.15 protein_coding synonymous_variant LOW 819C>T Arg273Arg
M0009430 AILKEHJI_00005 4294 8 Skin 0.20 protein_coding synonymous_variant LOW 825A>G Gly275Gly
M0009431 AILKEHJI_00005 4313 6 Skin 0.15 protein_coding synonymous_variant LOW 844C>T Leu282Leu
M0009432 AILKEHJI_00005 4315 6 Skin 0.15 protein_coding synonymous_variant LOW 846A>G Leu282Leu
M0009433 AILKEHJI_00007 4792 11 Skin 0.28 protein_coding synonymous_variant LOW 747T>C Ser249Ser
M0009434 AILKEHJI_00007 4798 3 Skin 0.08 protein_coding synonymous_variant LOW 741C>T Val247Val
M0009435 AILKEHJI_00007 4815 8 Skin 0.20 protein_coding synonymous_variant LOW 724T>C Leu242Leu
M0009436 AILKEHJI_00007 4921 5 Skin 0.13 protein_coding synonymous_variant LOW 618T>C Ile206Ile
M0009437 AILKEHJI_00007 4927 16 Skin 0.40 protein_coding synonymous_variant LOW 612C>T Ser204Ser
M0009438 AILKEHJI_00007 4936 13 Skin 0.33 protein_coding synonymous_variant LOW 603T>C Asn201Asn
M0009439 AILKEHJI_00007 5110 7 Skin 0.18 protein_coding synonymous_variant LOW 429G>A Glu143Glu
M0009440 AILKEHJI_00007 5400 12 Skin 0.30 protein_coding missense_variant MODERATE 139A>G Asn47Asp
M0009441 AILKEHJI_00007 5496 8 Skin 0.20 protein_coding synonymous_variant LOW 43C>T Leu15Leu
M0009442 AILKEHJI_00007 5497 5 Skin 0.13 protein_coding missense_variant MODERATE 42G>A Met14Ile
M0009443 AILKEHJI_00005 4337 5 Skin 0.13 protein_coding missense_variant MODERATE 868G>A Ala290Thr
M0009444 AILKEHJI_00006 4452 5 Skin 0.13 protein_coding synonymous_variant LOW 42T>G Val14Val
M0009445 AILKEHJI_00006 4455 6 Skin 0.15 protein_coding synonymous_variant LOW 45C>A Gly15Gly
M0009446 AILKEHJI_00007 5053 9 Skin 0.23 protein_coding synonymous_variant LOW 486T>C Val162Val
M0009447 AILKEHJI_00007 5055 9 Skin 0.23 protein_coding missense_variant MODERATE 484G>A Val162Ile
M0009448 AILKEHJI_00007 5155 6 Skin 0.15 protein_coding synonymous_variant LOW 384C>T Gly128Gly
M0009449 AILKEHJI_00007 5167 5 Skin 0.13 protein_coding synonymous_variant LOW 372T>C Ile124Ile
M0009450 AILKEHJI_00007 5380 3 Skin 0.08 protein_coding synonymous_variant LOW 159G>C Thr53Thr
M0009451 AILKEHJI_00007 5419 4 Skin 0.10 protein_coding synonymous_variant LOW 120A>T Ser40Ser
M0009452 AILKEHJI_00007 5422 5 Skin 0.13 protein_coding synonymous_variant LOW 117C>G Ala39Ala
M0009453 AILKEHJI_00001 5576 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4248A>G None
M0009454 AILKEHJI_00005 133 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3337G>T None
M0009455 AILKEHJI_00005 159 7 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -3311G>A None
M0009456 AILKEHJI_00001 204 5 Skin 0.13 protein_coding synonymous_variant LOW 1125T>C Ser375Ser
M0009457 AILKEHJI_00001 225 5 Skin 0.13 protein_coding synonymous_variant LOW 1104A>C Ala368Ala
M0009458 AILKEHJI_00001 255 5 Skin 0.13 protein_coding synonymous_variant LOW 1074T>G Leu358Leu
M0009459 AILKEHJI_00001 351 9 Skin 0.23 protein_coding synonymous_variant LOW 978A>G Val326Val
M0009460 AILKEHJI_00001 441 7 Skin 0.18 protein_coding synonymous_variant LOW 888A>G Leu296Leu
M0009461 AILKEHJI_00001 450 7 Skin 0.18 protein_coding synonymous_variant LOW 879A>G Lys293Lys
M0009462 AILKEHJI_00001 456 7 Skin 0.18 protein_coding synonymous_variant LOW 873C>T Asn291Asn
M0009463 AILKEHJI_00001 458 7 Skin 0.18 protein_coding missense_variant MODERATE 871A>G Asn291Asp
M0009464 AILKEHJI_00001 459 7 Skin 0.18 protein_coding synonymous_variant LOW 870C>T Ala290Ala
M0009465 AILKEHJI_00001 669 5 Skin 0.13 protein_coding missense_variant MODERATE 660T>A Asp220Glu
M0009466 AILKEHJI_00002 1482 10 Skin 0.25 protein_coding missense_variant MODERATE 418A>G Thr140Ala
M0009467 AILKEHJI_00002 1498 8 Skin 0.20 protein_coding synonymous_variant LOW 402G>C Thr134Thr
M0009468 AILKEHJI_00002 1837 3 Skin 0.08 protein_coding synonymous_variant LOW 63A>C Thr21Thr
M0009469 AILKEHJI_00005 3562 11 Skin 0.28 protein_coding synonymous_variant LOW 93C>T Pro31Pro
M0009470 AILKEHJI_00005 3700 16 Skin 0.40 protein_coding missense_variant MODERATE 231T>G Asp77Glu
M0009471 AILKEHJI_00006 4567 20 Skin 0.50 protein_coding synonymous_variant LOW 157C>T Leu53Leu
M0009472 AILKEHJI_00006 4570 16 Skin 0.40 protein_coding missense_variant MODERATE 160A>G Ser54Gly
M0009473 AILKEHJI_00006 4571 20 Skin 0.50 protein_coding missense_variant MODERATE 161G>A Ser54Asn
M0009474 AILKEHJI_00001 267 5 Skin 0.13 protein_coding synonymous_variant LOW 1062T>G Pro354Pro
M0009475 AILKEHJI_00001 507 3 Skin 0.08 protein_coding synonymous_variant LOW 822G>A Leu274Leu
M0009476 AILKEHJI_00001 522 4 Skin 0.10 protein_coding synonymous_variant LOW 807A>G Glu269Glu
M0009477 AILKEHJI_00001 555 5 Skin 0.13 protein_coding synonymous_variant LOW 774G>A Leu258Leu
M0009478 AILKEHJI_00001 570 4 Skin 0.10 protein_coding synonymous_variant LOW 759G>C Ala253Ala
M0009479 AILKEHJI_00001 641 6 Skin 0.15 protein_coding synonymous_variant LOW 688T>C Leu230Leu
M0009480 AILKEHJI_00001 2043 10 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -715G>A None
M0009481 AILKEHJI_00001 2055 9 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -727G>A None
M0009482 AILKEHJI_00001 2468 14 Skin 0.35 protein_coding upstream_gene_variant MODIFIER -1140A>C None
M0009483 AILKEHJI_00001 2473 13 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -1145T>C None
M0009484 AILKEHJI_00001 3426 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2098C>A None
M0009485 AILKEHJI_00001 3465 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2137A>G None
M0009486 AILKEHJI_00001 3467 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2139A>G None
M0009487 AILKEHJI_00005 4246 6 Skin 0.15 protein_coding synonymous_variant LOW 777C>T Ser259Ser
M0009488 AILKEHJI_00005 4330 3 Skin 0.08 protein_coding synonymous_variant LOW 861G>C Ala287Ala
M0009489 AILKEHJI_00001 4354 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3026T>G None
M0009490 AILKEHJI_00001 4357 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3029A>C None
M0009491 AILKEHJI_00001 4369 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3041C>T None
M0009492 AILKEHJI_00001 4371 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3043C>T None
M0009493 AILKEHJI_00001 4376 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3048T>G None
M0009494 AILKEHJI_00001 3326 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1998A>G None
M0009495 AILKEHJI_00005 3721 7 Skin 0.18 protein_coding synonymous_variant LOW 252T>C Thr84Thr
M0009496 AILKEHJI_00005 3724 7 Skin 0.18 protein_coding synonymous_variant LOW 255C>T Ala85Ala
M0009497 AILKEHJI_00005 3728 6 Skin 0.15 protein_coding synonymous_variant LOW 259C>T Leu87Leu
M0009498 AILKEHJI_00006 4624 4 Skin 0.10 protein_coding missense_variant MODERATE 214A>G Thr72Ala
M0009499 AILKEHJI_00007 4915 4 Skin 0.10 protein_coding synonymous_variant LOW 624C>T Pro208Pro
M0009500 AILKEHJI_00004 2994 4 Skin 0.10 protein_coding synonymous_variant LOW 198C>T Ile66Ile
M0009501 AILKEHJI_00005 3856 7 Skin 0.18 protein_coding synonymous_variant LOW 387G>C Val129Val
M0009502 AILKEHJI_00005 3864 6 Skin 0.15 protein_coding missense_variant MODERATE 395G>A Gly132Asp
M0009503 AILKEHJI_00005 4221 3 Skin 0.08 protein_coding missense_variant MODERATE 752T>C Val251Ala
M0009504 AILKEHJI_00006 4656 5 Skin 0.13 protein_coding synonymous_variant LOW 246T>C Asp82Asp
M0009505 AILKEHJI_00006 4662 4 Skin 0.10 protein_coding synonymous_variant LOW 252G>A Val84Val
M0009506 AILKEHJI_00006 4663 5 Skin 0.13 protein_coding missense_variant MODERATE 253G>A Asp85Asn
M0009507 AILKEHJI_00006 4668 4 Skin 0.10 protein_coding synonymous_variant LOW 258C>T Asn86Asn
M0009508 AILKEHJI_00006 4674 5 Skin 0.13 protein_coding synonymous_variant LOW 264T>C Phe88Phe
M0009509 AILKEHJI_00006 4679 5 Skin 0.13 protein_coding splice_region_variant&stop_retained_variant LOW 269G>A Ter90Ter
M0009510 AILKEHJI_00001 4681 5 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3353C>T None
M0009511 AILKEHJI_00007 4923 7 Skin 0.18 protein_coding missense_variant MODERATE 616A>G Ile206Val
M0009512 AILKEHJI_00007 5029 4 Skin 0.10 protein_coding synonymous_variant LOW 510A>G Leu170Leu
M0009513 AILKEHJI_00007 5037 4 Skin 0.10 protein_coding synonymous_variant LOW 502C>T Leu168Leu
M0009514 AILKEHJI_00007 5182 4 Skin 0.10 protein_coding synonymous_variant LOW 357C>G Thr119Thr
M0009515 AILKEHJI_00007 5320 3 Skin 0.08 protein_coding synonymous_variant LOW 219C>T Gly73Gly
M0009516 AILKEHJI_00007 5451 3 Skin 0.08 protein_coding missense_variant MODERATE 88G>A Asp30Asn
M0009517 AILKEHJI_00007 5521 6 Skin 0.15 protein_coding synonymous_variant LOW 18G>A Ala6Ala
M0009518 AILKEHJI_00002 1599 11 Skin 0.28 protein_coding missense_variant MODERATE 301C>G Pro101Ala
M0009519 AILKEHJI_00002 1600 11 Skin 0.28 protein_coding synonymous_variant LOW 300C>T Phe100Phe
M0009520 AILKEHJI_00004 2631 8 Skin 0.20 protein_coding synonymous_variant LOW 561T>C Leu187Leu
M0009521 AILKEHJI_00004 2964 3 Skin 0.08 protein_coding synonymous_variant LOW 228A>G Ser76Ser
M0009522 AILKEHJI_00004 2985 3 Skin 0.08 protein_coding synonymous_variant LOW 207C>T Asp69Asp
M0009523 AILKEHJI_00005 3958 5 Skin 0.13 protein_coding synonymous_variant LOW 489C>G Pro163Pro
M0009524 AILKEHJI_00005 3975 5 Skin 0.13 protein_coding missense_variant MODERATE 506A>C Asn169Thr
M0009525 AILKEHJI_00005 3977 5 Skin 0.13 protein_coding missense_variant MODERATE 508C>A Pro170Thr
M0009526 AILKEHJI_00006 4626 6 Skin 0.15 protein_coding synonymous_variant LOW 216C>T Thr72Thr
M0009527 AILKEHJI_00006 4628 6 Skin 0.15 protein_coding missense_variant MODERATE 218C>T Thr73Ile
M0009528 AILKEHJI_00001 4718 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3390A>C None
M0009529 AILKEHJI_00007 5071 7 Skin 0.18 protein_coding synonymous_variant LOW 468G>A Lys156Lys
M0009530 AILKEHJI_00007 5122 5 Skin 0.13 protein_coding synonymous_variant LOW 417G>A Leu139Leu
M0009531 AILKEHJI_00007 5139 4 Skin 0.10 protein_coding missense_variant MODERATE 400G>C Val134Leu
M0009532 AILKEHJI_00007 5293 5 Skin 0.13 protein_coding synonymous_variant LOW 246T>C Asn82Asn
M0009533 AILKEHJI_00001 494 5 Skin 0.13 protein_coding missense_variant MODERATE 835G>A Glu279Lys
M0009534 AILKEHJI_00001 759 4 Skin 0.10 protein_coding synonymous_variant LOW 570G>C Ala190Ala
M0009535 AILKEHJI_00001 1158 4 Skin 0.10 protein_coding synonymous_variant LOW 171A>C Val57Val
M0009536 AILKEHJI_00001 1185 6 Skin 0.15 protein_coding missense_variant MODERATE 144T>G Ile48Met
M0009537 AILKEHJI_00002 1591 4 Skin 0.10 protein_coding synonymous_variant LOW 309C>G Val103Val
M0009538 AILKEHJI_00002 1594 4 Skin 0.10 protein_coding synonymous_variant LOW 306T>G Leu102Leu
M0009539 AILKEHJI_00002 1597 4 Skin 0.10 protein_coding synonymous_variant LOW 303G>A Pro101Pro
M0009540 AILKEHJI_00004 2633 6 Skin 0.15 protein_coding missense_variant MODERATE 559C>T Leu187Phe
M0009541 AILKEHJI_00003 2092 3 Skin 0.08 protein_coding synonymous_variant LOW 282C>T Gly94Gly
M0009542 AILKEHJI_00003 2095 3 Skin 0.08 protein_coding synonymous_variant LOW 279T>C Cys93Cys
M0009543 AILKEHJI_00003 2296 3 Skin 0.08 protein_coding synonymous_variant LOW 78T>C Tyr26Tyr
M0009544 AILKEHJI_00001 3354 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2026T>C None
M0009545 AILKEHJI_00002 1416 5 Skin 0.13 protein_coding missense_variant MODERATE 484A>G Ile162Val
M0009546 AILKEHJI_00002 1417 5 Skin 0.13 protein_coding synonymous_variant LOW 483G>C Ala161Ala
M0009547 AILKEHJI_00002 1474 7 Skin 0.18 protein_coding synonymous_variant LOW 426G>A Lys142Lys
M0009548 AILKEHJI_00002 1531 6 Skin 0.15 protein_coding synonymous_variant LOW 369T>C Tyr123Tyr
M0009549 AILKEHJI_00002 1738 8 Skin 0.20 protein_coding synonymous_variant LOW 162C>G Thr54Thr
M0009550 AILKEHJI_00002 1740 8 Skin 0.20 protein_coding missense_variant MODERATE 160A>T Thr54Ser
M0009551 AILKEHJI_00001 4728 5 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3400A>G None
M0009552 AILKEHJI_00001 4758 7 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -3430T>A None
M0009553 AILKEHJI_00007 4765 4 Skin 0.10 protein_coding synonymous_variant LOW 774G>A Gln258Gln
M0009554 AILKEHJI_00007 5002 3 Skin 0.08 protein_coding synonymous_variant LOW 537C>T Asn179Asn
M0009555 AILKEHJI_00007 5143 3 Skin 0.08 protein_coding synonymous_variant LOW 396G>A Ala132Ala
M0009556 AILKEHJI_00007 5239 3 Skin 0.08 protein_coding synonymous_variant LOW 300A>G Ala100Ala
M0009557 AILKEHJI_00007 5302 3 Skin 0.08 protein_coding synonymous_variant LOW 237T>C Asp79Asp
M0009558 AILKEHJI_00007 5308 3 Skin 0.08 protein_coding synonymous_variant LOW 231C>T Tyr77Tyr
M0009559 AILKEHJI_00001 381 4 Skin 0.10 protein_coding synonymous_variant LOW 948C>T Ile316Ile
M0009560 AILKEHJI_00001 501 4 Skin 0.10 protein_coding synonymous_variant LOW 828G>T Ala276Ala
M0009561 AILKEHJI_00001 1179 4 Skin 0.10 protein_coding synonymous_variant LOW 150C>G Leu50Leu
M0009562 AILKEHJI_00001 1182 3 Skin 0.08 protein_coding synonymous_variant LOW 147G>A Val49Val
M0009563 AILKEHJI_00001 1137 4 Skin 0.10 protein_coding synonymous_variant LOW 192T>C Leu64Leu
M0009564 AILKEHJI_00006 4509 5 Skin 0.13 protein_coding synonymous_variant LOW 99C>T Ser33Ser
M0009565 AILKEHJI_00006 4557 3 Skin 0.08 protein_coding synonymous_variant LOW 147G>A Leu49Leu
M0009566 AILKEHJI_00006 4566 3 Skin 0.08 protein_coding synonymous_variant LOW 156G>A Val52Val
M0009567 AILKEHJI_00001 636 3 Skin 0.08 protein_coding synonymous_variant LOW 693C>T Arg231Arg
M0009568 AILKEHJI_00001 5632 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4304T>C None
M0009569 AILKEHJI_00007 4824 4 Skin 0.10 protein_coding missense_variant MODERATE 715G>A Asp239Asn






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term