Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1803
  Reference Plasmid   1111525849645395_bin.4__k141_365696
  Reference Plasmid Size   121754
  Reference Plasmid GC Content   0.32
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0016556 JMLEJLIO_00053 45399 4 Skin 0.09 protein_coding missense_variant MODERATE 130A>G Lys44Glu
M0016557 JMLEJLIO_00053 45400 4 Skin 0.09 protein_coding missense_variant MODERATE 131A>C Lys44Thr
M0016558 JMLEJLIO_00054 45506 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -137T>G None
M0016559 JMLEJLIO_00054 45526 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -117T>C None
M0016560 JMLEJLIO_00054 45550 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -93A>C None
M0016561 JMLEJLIO_00054 45611 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -32G>A None
M0016562 JMLEJLIO_00054 45745 4 Skin 0.09 protein_coding missense_variant MODERATE 103A>G Lys35Glu
M0016563 JMLEJLIO_00054 45787 4 Skin 0.09 protein_coding missense_variant MODERATE 145A>G Thr49Ala
M0016564 JMLEJLIO_00054 45800 4 Skin 0.09 protein_coding missense_variant MODERATE 158A>G Asn53Ser
M0016565 JMLEJLIO_00054 45888 4 Skin 0.09 protein_coding synonymous_variant LOW 246C>T Asn82Asn
M0016566 JMLEJLIO_00054 45899 4 Skin 0.09 protein_coding missense_variant MODERATE 257T>C Leu86Ser
M0016567 JMLEJLIO_00054 45935 4 Skin 0.09 protein_coding missense_variant MODERATE 293T>G Leu98Arg
M0016568 JMLEJLIO_00055 45987 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -75T>C None
M0016569 JMLEJLIO_00055 46017 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -45A>G None
M0016570 JMLEJLIO_00055 46020 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -42T>A None
M0016571 JMLEJLIO_00055 46149 4 Skin 0.09 protein_coding missense_variant MODERATE 88G>A Glu30Lys
M0016572 JMLEJLIO_00055 46204 4 Skin 0.09 protein_coding missense_variant MODERATE 143C>T Ser48Leu
M0016573 JMLEJLIO_00055 46307 4 Skin 0.09 protein_coding missense_variant MODERATE 246A>C Gln82His
M0016574 JMLEJLIO_00055 46323 4 Skin 0.09 protein_coding missense_variant MODERATE 262C>A Leu88Ile
M0016575 JMLEJLIO_00055 46364 5 Skin 0.11 protein_coding synonymous_variant LOW 303A>G Gly101Gly
M0016576 JMLEJLIO_00055 46378 3 Skin 0.07 protein_coding missense_variant MODERATE 317T>C Val106Ala
M0016577 JMLEJLIO_00055 46407 5 Skin 0.11 protein_coding missense_variant MODERATE 346G>A Gly116Ser
M0016578 JMLEJLIO_00055 46430 5 Skin 0.11 protein_coding synonymous_variant LOW 369A>G Leu123Leu
M0016579 JMLEJLIO_00055 46600 4 Skin 0.09 protein_coding missense_variant MODERATE 539C>T Thr180Ile
M0016580 JMLEJLIO_00055 46613 4 Skin 0.09 protein_coding synonymous_variant LOW 552T>C Ser184Ser
M0016581 JMLEJLIO_00055 46625 4 Skin 0.09 protein_coding synonymous_variant LOW 564T>C Tyr188Tyr
M0016582 JMLEJLIO_00055 46662 4 Skin 0.09 protein_coding missense_variant MODERATE 601A>C Thr201Pro
M0016583 JMLEJLIO_00055 46670 4 Skin 0.09 protein_coding synonymous_variant LOW 609T>C Asn203Asn
M0016584 JMLEJLIO_00056 47225 4 Skin 0.09 protein_coding missense_variant MODERATE 214A>C Thr72Pro
M0016585 JMLEJLIO_00056 47276 4 Skin 0.09 protein_coding missense_variant MODERATE 265C>T His89Tyr
M0016586 JMLEJLIO_00056 47394 4 Skin 0.09 protein_coding missense_variant MODERATE 383T>C Leu128Ser
M0016587 JMLEJLIO_00056 47401 4 Skin 0.09 protein_coding synonymous_variant LOW 390T>C Phe130Phe
M0016588 JMLEJLIO_00056 47434 4 Skin 0.09 protein_coding synonymous_variant LOW 423T>C Asp141Asp
M0016589 JMLEJLIO_00057 47446 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -98T>C None
M0016590 JMLEJLIO_00057 47460 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -84A>G None
M0016591 JMLEJLIO_00057 47477 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -67T>G None
M0016592 JMLEJLIO_00057 47627 4 Skin 0.09 protein_coding synonymous_variant LOW 84G>A Thr28Thr
M0016593 JMLEJLIO_00057 47879 5 Skin 0.11 protein_coding synonymous_variant LOW 336A>G Arg112Arg
M0016594 JMLEJLIO_00057 48152 4 Skin 0.09 protein_coding synonymous_variant LOW 609A>G Lys203Lys
M0016595 JMLEJLIO_00057 48218 4 Skin 0.09 protein_coding synonymous_variant LOW 675T>C Tyr225Tyr
M0016596 JMLEJLIO_00057 48232 4 Skin 0.09 protein_coding missense_variant MODERATE 689G>A Ser230Asn
M0016597 JMLEJLIO_00057 48234 4 Skin 0.09 protein_coding missense_variant MODERATE 691T>C Ser231Pro
M0016598 JMLEJLIO_00057 48281 5 Skin 0.11 protein_coding synonymous_variant LOW 738T>C Ala246Ala
M0016599 JMLEJLIO_00065 53955 3 Skin 0.07 protein_coding missense_variant MODERATE 142C>T His48Tyr
M0016600 JMLEJLIO_00065 53979 3 Skin 0.07 protein_coding stop_lost&splice_region_variant HIGH 166T>C Ter56Glnext*?
M0016601 JMLEJLIO_00066 54003 3 Skin 0.07 protein_coding missense_variant MODERATE 22A>T Thr8Ser
M0016602 JMLEJLIO_00066 54176 3 Skin 0.07 protein_coding synonymous_variant LOW 195T>C Asp65Asp
M0016603 JMLEJLIO_00066 54184 3 Skin 0.07 protein_coding missense_variant MODERATE 203T>C Ile68Thr
M0016604 JMLEJLIO_00062 54354 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -2165A>C None
M0016605 JMLEJLIO_00062 54421 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -2232C>T None
M0016606 JMLEJLIO_00062 54481 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -2292T>C None
M0016607 JMLEJLIO_00062 54496 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -2307A>G None
M0016608 JMLEJLIO_00062 54520 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -2331A>G None
M0016609 JMLEJLIO_00062 54564 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -2375G>A None
M0016610 JMLEJLIO_00067 54600 4 Skin 0.09 protein_coding missense_variant MODERATE 7G>T Asp3Tyr
M0016611 JMLEJLIO_00067 54618 4 Skin 0.09 protein_coding missense_variant MODERATE 25T>A Ser9Thr
M0016612 JMLEJLIO_00067 54652 4 Skin 0.09 protein_coding missense_variant MODERATE 59C>T Ala20Val
M0016613 JMLEJLIO_00067 54683 4 Skin 0.09 protein_coding synonymous_variant LOW 90C>T Ser30Ser
M0016614 JMLEJLIO_00067 54817 4 Skin 0.09 protein_coding missense_variant MODERATE 224C>T Ser75Leu
M0016615 JMLEJLIO_00067 54834 4 Skin 0.09 protein_coding missense_variant MODERATE 241G>A Glu81Lys
M0016616 JMLEJLIO_00067 54883 4 Skin 0.09 protein_coding missense_variant MODERATE 290T>A Met97Lys
M0016617 JMLEJLIO_00067 54889 4 Skin 0.09 protein_coding missense_variant MODERATE 296T>C Ile99Thr
M0016618 JMLEJLIO_00067 55053 4 Skin 0.09 protein_coding missense_variant MODERATE 460C>T His154Tyr
M0016619 JMLEJLIO_00067 55066 4 Skin 0.09 protein_coding missense_variant MODERATE 473G>A Gly158Asp
M0016620 JMLEJLIO_00067 55076 4 Skin 0.09 protein_coding synonymous_variant LOW 483T>C Val161Val
M0016621 JMLEJLIO_00067 55077 4 Skin 0.09 protein_coding missense_variant MODERATE 484A>G Thr162Ala
M0016622 JMLEJLIO_00067 55094 4 Skin 0.09 protein_coding missense_variant MODERATE 501A>G Ile167Met
M0016623 JMLEJLIO_00067 55100 4 Skin 0.09 protein_coding synonymous_variant LOW 507C>T Ile169Ile
M0016624 JMLEJLIO_00068 55193 4 Skin 0.09 protein_coding missense_variant MODERATE 79T>G Tyr27Asp
M0016625 JMLEJLIO_00068 55197 4 Skin 0.09 protein_coding missense_variant MODERATE 83T>C Val28Ala
M0016626 JMLEJLIO_00068 55307 3 Skin 0.07 protein_coding missense_variant MODERATE 193C>T Leu65Phe
M0016627 JMLEJLIO_00068 55409 3 Skin 0.07 protein_coding missense_variant MODERATE 295T>A Trp99Arg
M0016628 JMLEJLIO_00068 55431 3 Skin 0.07 protein_coding missense_variant MODERATE 317G>A Arg106Gln
M0016629 JMLEJLIO_00068 55452 3 Skin 0.07 protein_coding stop_lost&splice_region_variant HIGH 338A>T Ter113Leuext*?
M0016630 JMLEJLIO_00062 55486 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3297G>A None
M0016631 JMLEJLIO_00062 55497 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3308G>A None
M0016632 JMLEJLIO_00062 55507 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3318T>C None
M0016633 JMLEJLIO_00062 55510 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3321C>T None
M0016634 JMLEJLIO_00062 55557 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3368A>C None
M0016635 JMLEJLIO_00062 55584 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3395G>T None
M0016636 JMLEJLIO_00062 55595 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3406T>C None
M0016637 JMLEJLIO_00062 55631 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3442G>A None
M0016638 JMLEJLIO_00062 55721 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3532G>T None
M0016639 JMLEJLIO_00069 55768 3 Skin 0.07 protein_coding missense_variant MODERATE 24T>A Phe8Leu
M0016640 JMLEJLIO_00069 55772 3 Skin 0.07 protein_coding missense_variant MODERATE 28T>A Leu10Ile
M0016641 JMLEJLIO_00062 55854 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3665T>A None
M0016642 JMLEJLIO_00062 56030 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3841C>A None
M0016643 JMLEJLIO_00070 56089 4 Skin 0.09 protein_coding missense_variant MODERATE 49C>T Leu17Phe
M0016644 JMLEJLIO_00070 56201 4 Skin 0.09 protein_coding missense_variant MODERATE 161A>G Asp54Gly
M0016645 JMLEJLIO_00070 56258 3 Skin 0.07 protein_coding missense_variant MODERATE 218A>T Lys73Met
M0016646 JMLEJLIO_00070 56296 4 Skin 0.09 protein_coding missense_variant MODERATE 256G>A Asp86Asn
M0016647 JMLEJLIO_00070 56333 4 Skin 0.09 protein_coding missense_variant MODERATE 293T>C Val98Ala
M0016648 JMLEJLIO_00070 56373 4 Skin 0.09 protein_coding missense_variant MODERATE 333G>T Arg111Ser
M0016649 JMLEJLIO_00070 56387 4 Skin 0.09 protein_coding missense_variant MODERATE 347T>A Ile116Asn
M0016650 JMLEJLIO_00070 56451 4 Skin 0.09 protein_coding stop_lost&splice_region_variant HIGH 411A>T Ter137Tyrext*?
M0016651 JMLEJLIO_00062 56473 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4284G>A None
M0016652 JMLEJLIO_00071 56576 3 Skin 0.07 protein_coding missense_variant MODERATE 95G>A Arg32Lys
M0016653 JMLEJLIO_00071 56581 3 Skin 0.07 protein_coding missense_variant MODERATE 100T>G Ser34Ala
M0016654 JMLEJLIO_00071 56583 3 Skin 0.07 protein_coding synonymous_variant LOW 102T>G Ser34Ser
M0016655 JMLEJLIO_00071 56632 4 Skin 0.09 protein_coding missense_variant MODERATE 151T>C Cys51Arg
M0016656 JMLEJLIO_00042 33892 5 Skin 0.11 protein_coding synonymous_variant LOW 159G>A Glu53Glu
M0016657 JMLEJLIO_00032 28369 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3993A>G None
M0016658 JMLEJLIO_00032 28464 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4088G>A None
M0016659 JMLEJLIO_00032 28476 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4100C>T None
M0016660 JMLEJLIO_00032 28477 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4101T>G None
M0016661 JMLEJLIO_00032 28481 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4105C>T None
M0016662 JMLEJLIO_00032 28496 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4120C>A None
M0016663 JMLEJLIO_00035 28554 4 Skin 0.09 protein_coding missense_variant MODERATE 23C>T Ala8Val
M0016664 JMLEJLIO_00035 28602 4 Skin 0.09 protein_coding missense_variant MODERATE 71G>T Arg24Met
M0016665 JMLEJLIO_00035 28613 4 Skin 0.09 protein_coding missense_variant MODERATE 82C>A Arg28Ser
M0016666 JMLEJLIO_00035 28623 4 Skin 0.09 protein_coding missense_variant MODERATE 92C>T Ala31Val
M0016667 JMLEJLIO_00035 28627 4 Skin 0.09 protein_coding synonymous_variant LOW 96G>A Gln32Gln
M0016668 JMLEJLIO_00032 28697 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4321A>G None
M0016669 JMLEJLIO_00032 28833 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4457A>G None
M0016670 JMLEJLIO_00036 28911 3 Skin 0.07 protein_coding synonymous_variant LOW 6T>C Ala2Ala
M0016671 JMLEJLIO_00036 28928 3 Skin 0.07 protein_coding missense_variant MODERATE 23G>T Gly8Val
M0016672 JMLEJLIO_00036 28955 3 Skin 0.07 protein_coding missense_variant MODERATE 50G>A Gly17Glu
M0016673 JMLEJLIO_00036 28979 3 Skin 0.07 protein_coding missense_variant MODERATE 74C>A Ala25Asp
M0016674 JMLEJLIO_00036 29025 3 Skin 0.07 protein_coding missense_variant MODERATE 120A>T Lys40Asn
M0016675 JMLEJLIO_00036 29055 4 Skin 0.09 protein_coding synonymous_variant LOW 150C>T Gly50Gly
M0016676 JMLEJLIO_00036 29105 4 Skin 0.09 protein_coding missense_variant MODERATE 200T>C Val67Ala
M0016677 JMLEJLIO_00036 29120 4 Skin 0.09 protein_coding missense_variant MODERATE 215T>C Val72Ala
M0016678 JMLEJLIO_00036 29156 4 Skin 0.09 protein_coding missense_variant MODERATE 251A>G Tyr84Cys
M0016679 JMLEJLIO_00037 29361 4 Skin 0.09 protein_coding missense_variant MODERATE 193G>A Val65Ile
M0016680 JMLEJLIO_00037 29402 4 Skin 0.09 protein_coding synonymous_variant LOW 234C>T Phe78Phe
M0016681 JMLEJLIO_00038 29513 3 Skin 0.07 protein_coding missense_variant MODERATE 76C>T Leu26Phe
M0016682 JMLEJLIO_00038 29519 3 Skin 0.07 protein_coding missense_variant MODERATE 82T>A Cys28Ser
M0016683 JMLEJLIO_00038 29585 3 Skin 0.07 protein_coding missense_variant MODERATE 148T>A Phe50Ile
M0016684 JMLEJLIO_00038 29604 3 Skin 0.07 protein_coding missense_variant MODERATE 167G>A Arg56His
M0016685 JMLEJLIO_00038 29648 3 Skin 0.07 protein_coding missense_variant MODERATE 211A>G Ile71Val
M0016686 JMLEJLIO_00038 29655 3 Skin 0.07 protein_coding missense_variant MODERATE 218A>G Asp73Gly
M0016687 JMLEJLIO_00038 29777 3 Skin 0.07 protein_coding missense_variant MODERATE 340C>T Pro114Ser
M0016688 JMLEJLIO_00038 29778 3 Skin 0.07 protein_coding missense_variant MODERATE 341C>T Pro114Leu
M0016689 JMLEJLIO_00038 29780 3 Skin 0.07 protein_coding missense_variant MODERATE 343T>C Tyr115His
M0016690 JMLEJLIO_00038 29791 3 Skin 0.07 protein_coding synonymous_variant LOW 354C>A Ile118Ile
M0016691 JMLEJLIO_00038 29866 3 Skin 0.07 protein_coding synonymous_variant LOW 429T>C Ala143Ala
M0016692 JMLEJLIO_00038 30012 3 Skin 0.07 protein_coding missense_variant MODERATE 575T>G Leu192Trp
M0016693 JMLEJLIO_00038 30022 3 Skin 0.07 protein_coding synonymous_variant LOW 585C>G Leu195Leu
M0016694 JMLEJLIO_00038 30023 3 Skin 0.07 protein_coding missense_variant MODERATE 586G>A Val196Ile
M0016695 JMLEJLIO_00038 30094 4 Skin 0.09 protein_coding synonymous_variant LOW 657C>T Asp219Asp
M0016696 JMLEJLIO_00038 30122 4 Skin 0.09 protein_coding missense_variant MODERATE 685A>G Asn229Asp
M0016697 JMLEJLIO_00033 30187 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3851A>C None
M0016698 JMLEJLIO_00033 30259 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3923C>T None
M0016699 JMLEJLIO_00033 30344 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4008T>C None
M0016700 JMLEJLIO_00033 30543 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4207A>G None
M0016701 JMLEJLIO_00033 30586 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4250T>C None
M0016702 JMLEJLIO_00033 30620 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4284T>C None
M0016703 JMLEJLIO_00033 30652 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4316T>G None
M0016704 JMLEJLIO_00033 30685 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4349T>A None
M0016705 JMLEJLIO_00033 30692 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4356G>A None
M0016706 JMLEJLIO_00033 30700 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4364A>T None
M0016707 JMLEJLIO_00033 30735 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4399G>A None
M0016708 JMLEJLIO_00033 30743 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4407A>G None
M0016709 JMLEJLIO_00039 30800 3 Skin 0.07 protein_coding missense_variant MODERATE 101C>T Ala34Val
M0016710 JMLEJLIO_00039 30812 3 Skin 0.07 protein_coding missense_variant MODERATE 89T>C Val30Ala
M0016711 JMLEJLIO_00039 30826 3 Skin 0.07 protein_coding missense_variant MODERATE 75G>A Met25Ile
M0016712 JMLEJLIO_00039 30828 3 Skin 0.07 protein_coding missense_variant MODERATE 73A>G Met25Val
M0016713 JMLEJLIO_00039 30862 3 Skin 0.07 protein_coding synonymous_variant LOW 39C>T Asn13Asn
M0016714 JMLEJLIO_00033 30930 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4594A>T None
M0016715 JMLEJLIO_00033 30936 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4600G>A None
M0016716 JMLEJLIO_00033 30989 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4653A>C None
M0016717 JMLEJLIO_00033 30997 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4661T>G None
M0016718 JMLEJLIO_00033 31006 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4670A>C None
M0016719 JMLEJLIO_00033 31007 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4671T>C None
M0016720 JMLEJLIO_00033 31031 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4695A>G None
M0016721 JMLEJLIO_00033 31032 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4696T>G None
M0016722 JMLEJLIO_00033 31061 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4725A>T None
M0016723 JMLEJLIO_00033 31074 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4738C>T None
M0016724 JMLEJLIO_00058 48817 3 Skin 0.07 protein_coding synonymous_variant LOW 225C>T Ile75Ile
M0016725 JMLEJLIO_00058 48825 3 Skin 0.07 protein_coding missense_variant MODERATE 233C>T Ala78Val
M0016726 JMLEJLIO_00058 48976 3 Skin 0.07 protein_coding synonymous_variant LOW 384T>C Phe128Phe
M0016727 JMLEJLIO_00059 49096 3 Skin 0.07 protein_coding synonymous_variant LOW 6A>T Thr2Thr
M0016728 JMLEJLIO_00059 49148 3 Skin 0.07 protein_coding missense_variant MODERATE 58A>G Met20Val
M0016729 JMLEJLIO_00059 49214 3 Skin 0.07 protein_coding synonymous_variant LOW 124C>T Leu42Leu
M0016730 JMLEJLIO_00060 49244 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -86G>C None
M0016731 JMLEJLIO_00061 50005 6 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -58G>A None
M0016732 JMLEJLIO_00074 57576 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -322T>C None
M0016733 JMLEJLIO_00098 83376 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -62T>C None
M0016734 JMLEJLIO_00098 83447 3 Skin 0.07 protein_coding missense_variant MODERATE 10G>A Val4Ile
M0016735 JMLEJLIO_00098 83463 3 Skin 0.07 protein_coding missense_variant MODERATE 26C>T Ser9Leu
M0016736 JMLEJLIO_00098 83494 3 Skin 0.07 protein_coding synonymous_variant LOW 57G>A Lys19Lys
M0016737 JMLEJLIO_00098 83495 3 Skin 0.07 protein_coding missense_variant MODERATE 58A>G Ile20Val
M0016738 JMLEJLIO_00098 83541 3 Skin 0.07 protein_coding missense_variant MODERATE 104G>A Arg35Lys
M0016739 JMLEJLIO_00098 83542 3 Skin 0.07 protein_coding missense_variant MODERATE 105G>T Arg35Ser
M0016740 JMLEJLIO_00098 83555 3 Skin 0.07 protein_coding missense_variant MODERATE 118G>A Glu40Lys
M0016741 JMLEJLIO_00098 83588 3 Skin 0.07 protein_coding missense_variant MODERATE 151A>G Lys51Glu
M0016742 JMLEJLIO_00098 83604 3 Skin 0.07 protein_coding missense_variant MODERATE 167A>G Asn56Ser
M0016743 JMLEJLIO_00098 83644 3 Skin 0.07 protein_coding missense_variant MODERATE 207T>G Cys69Trp
M0016744 JMLEJLIO_00098 83688 3 Skin 0.07 protein_coding missense_variant MODERATE 251A>G Asn84Ser
M0016745 JMLEJLIO_00098 83716 3 Skin 0.07 protein_coding synonymous_variant LOW 279C>T Ser93Ser
M0016746 JMLEJLIO_00098 83728 3 Skin 0.07 protein_coding synonymous_variant LOW 291C>T Val97Val
M0016747 JMLEJLIO_00098 83784 3 Skin 0.07 protein_coding missense_variant MODERATE 347G>A Ser116Asn
M0016748 JMLEJLIO_00098 83825 3 Skin 0.07 protein_coding missense_variant MODERATE 388C>T Pro130Ser
M0016749 JMLEJLIO_00098 83854 3 Skin 0.07 protein_coding synonymous_variant LOW 417A>C Leu139Leu
M0016750 JMLEJLIO_00098 83888 3 Skin 0.07 protein_coding missense_variant MODERATE 451A>G Thr151Ala
M0016751 JMLEJLIO_00098 83909 3 Skin 0.07 protein_coding missense_variant MODERATE 472A>G Ile158Val
M0016752 JMLEJLIO_00098 83957 3 Skin 0.07 protein_coding missense_variant MODERATE 520A>G Thr174Ala
M0016753 JMLEJLIO_00098 83964 3 Skin 0.07 protein_coding missense_variant MODERATE 527T>C Val176Ala
M0016754 JMLEJLIO_00099 84161 3 Skin 0.07 protein_coding missense_variant MODERATE 188A>G Asn63Ser
M0016755 JMLEJLIO_00099 84162 7 Skin 0.16 protein_coding missense_variant MODERATE 189T>G Asn63Lys
M0016756 JMLEJLIO_00099 84219 4 Skin 0.09 protein_coding synonymous_variant LOW 246A>G Val82Val
M0016757 JMLEJLIO_00099 84322 4 Skin 0.09 protein_coding missense_variant MODERATE 349T>A Cys117Ser
M0016758 JMLEJLIO_00099 84332 4 Skin 0.09 protein_coding missense_variant MODERATE 359T>C Val120Ala
M0016759 JMLEJLIO_00099 84345 4 Skin 0.09 protein_coding synonymous_variant LOW 372C>T Phe124Phe
M0016760 JMLEJLIO_00099 84386 4 Skin 0.09 protein_coding missense_variant MODERATE 413A>G Asp138Gly
M0016761 JMLEJLIO_00099 84463 3 Skin 0.07 protein_coding missense_variant MODERATE 490T>C Tyr164His
M0016762 JMLEJLIO_00099 84576 3 Skin 0.07 protein_coding synonymous_variant LOW 603A>G Gln201Gln
M0016763 JMLEJLIO_00099 84586 3 Skin 0.07 protein_coding missense_variant MODERATE 613C>A Gln205Lys
M0016764 JMLEJLIO_00099 84606 3 Skin 0.07 protein_coding synonymous_variant LOW 633G>A Glu211Glu
M0016765 JMLEJLIO_00100 84623 3 Skin 0.07 protein_coding synonymous_variant LOW 6G>A Gly2Gly
M0016766 JMLEJLIO_00100 84633 3 Skin 0.07 protein_coding missense_variant MODERATE 16T>A Ser6Thr
M0016767 JMLEJLIO_00100 84652 3 Skin 0.07 protein_coding missense_variant MODERATE 35C>T Ala12Val
M0016768 JMLEJLIO_00100 84655 3 Skin 0.07 protein_coding missense_variant MODERATE 38T>C Leu13Pro
M0016769 JMLEJLIO_00100 84687 3 Skin 0.07 protein_coding missense_variant MODERATE 70C>T Leu24Phe
M0016770 JMLEJLIO_00100 84699 3 Skin 0.07 protein_coding missense_variant MODERATE 82C>T Pro28Ser
M0016771 JMLEJLIO_00100 84710 3 Skin 0.07 protein_coding synonymous_variant LOW 93G>A Leu31Leu
M0016772 JMLEJLIO_00100 84789 3 Skin 0.07 protein_coding missense_variant MODERATE 172A>G Asn58Asp
M0016773 JMLEJLIO_00100 84801 3 Skin 0.07 protein_coding stop_gained HIGH 184A>T Lys62*
M0016774 JMLEJLIO_00100 84831 3 Skin 0.07 protein_coding missense_variant MODERATE 214C>A Gln72Lys
M0016775 JMLEJLIO_00100 84852 3 Skin 0.07 protein_coding missense_variant MODERATE 235G>A Val79Ile
M0016776 JMLEJLIO_00100 84878 3 Skin 0.07 protein_coding synonymous_variant LOW 261T>C Asn87Asn
M0016777 JMLEJLIO_00100 84884 3 Skin 0.07 protein_coding synonymous_variant LOW 267G>A Gln89Gln
M0016778 JMLEJLIO_00100 84969 3 Skin 0.07 protein_coding missense_variant MODERATE 352T>A Phe118Ile
M0016779 JMLEJLIO_00100 84979 3 Skin 0.07 protein_coding missense_variant MODERATE 362C>T Ala121Val
M0016780 JMLEJLIO_00100 84995 3 Skin 0.07 protein_coding synonymous_variant LOW 378T>C Ile126Ile
M0016781 JMLEJLIO_00100 85010 3 Skin 0.07 protein_coding synonymous_variant LOW 393A>G Glu131Glu
M0016782 JMLEJLIO_00100 85013 3 Skin 0.07 protein_coding synonymous_variant LOW 396T>C Ala132Ala
M0016783 JMLEJLIO_00100 85014 3 Skin 0.07 protein_coding missense_variant MODERATE 397G>A Glu133Lys
M0016784 JMLEJLIO_00100 85029 3 Skin 0.07 protein_coding missense_variant MODERATE 412G>T Asp138Tyr
M0016785 JMLEJLIO_00100 85056 3 Skin 0.07 protein_coding stop_gained HIGH 439A>T Lys147*
M0016786 JMLEJLIO_00100 85120 3 Skin 0.07 protein_coding missense_variant MODERATE 503T>C Ile168Thr
M0016787 JMLEJLIO_00100 85122 3 Skin 0.07 protein_coding missense_variant MODERATE 505A>G Asn169Asp
M0016788 JMLEJLIO_00100 85206 3 Skin 0.07 protein_coding missense_variant MODERATE 589T>C Ser197Pro
M0016789 JMLEJLIO_00100 85260 3 Skin 0.07 protein_coding missense_variant MODERATE 643A>G Ser215Gly
M0016790 JMLEJLIO_00100 85264 3 Skin 0.07 protein_coding missense_variant MODERATE 647T>C Val216Ala
M0016791 JMLEJLIO_00100 85298 3 Skin 0.07 protein_coding missense_variant MODERATE 681G>A Met227Ile
M0016792 JMLEJLIO_00100 85552 3 Skin 0.07 protein_coding missense_variant MODERATE 935A>G Gln312Arg
M0016793 JMLEJLIO_00100 85581 3 Skin 0.07 protein_coding missense_variant MODERATE 964G>T Asp322Tyr
M0016794 JMLEJLIO_00100 85681 3 Skin 0.07 protein_coding missense_variant MODERATE 1064T>C Met355Thr
M0016795 JMLEJLIO_00100 85710 3 Skin 0.07 protein_coding missense_variant MODERATE 1093G>A Glu365Lys
M0016796 JMLEJLIO_00101 85766 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -26A>T None
M0016797 JMLEJLIO_00101 85780 3 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -12G>T None
M0016798 JMLEJLIO_00101 85806 3 Skin 0.07 protein_coding stop_gained HIGH 15T>G Tyr5*
M0016799 JMLEJLIO_00101 85854 3 Skin 0.07 protein_coding missense_variant MODERATE 63C>A Ser21Arg
M0016800 JMLEJLIO_00101 85907 4 Skin 0.09 protein_coding missense_variant MODERATE 116G>A Arg39Lys
M0016801 JMLEJLIO_00102 86117 4 Skin 0.09 protein_coding missense_variant MODERATE 223T>C Tyr75His
M0016802 JMLEJLIO_00102 86191 4 Skin 0.09 protein_coding synonymous_variant LOW 297T>C Leu99Leu
M0016803 JMLEJLIO_00102 86222 4 Skin 0.09 protein_coding missense_variant MODERATE 328C>T Leu110Phe
M0016804 JMLEJLIO_00102 86275 4 Skin 0.09 protein_coding synonymous_variant LOW 381A>G Glu127Glu
M0016805 JMLEJLIO_00102 86277 4 Skin 0.09 protein_coding missense_variant MODERATE 383T>C Val128Ala
M0016806 JMLEJLIO_00102 86317 4 Skin 0.09 protein_coding missense_variant MODERATE 423T>A Phe141Leu
M0016807 JMLEJLIO_00102 86382 4 Skin 0.09 protein_coding stop_lost&splice_region_variant HIGH 488A>G Ter163Trpext*?
M0016808 JMLEJLIO_00103 86530 4 Skin 0.09 protein_coding synonymous_variant LOW 54T>C Phe18Phe
M0016809 JMLEJLIO_00103 86542 4 Skin 0.09 protein_coding synonymous_variant LOW 66T>C Ala22Ala
M0016810 JMLEJLIO_00103 86659 4 Skin 0.09 protein_coding synonymous_variant LOW 183T>C Tyr61Tyr
M0016811 JMLEJLIO_00103 86671 4 Skin 0.09 protein_coding missense_variant MODERATE 195G>A Met65Ile
M0016812 JMLEJLIO_00103 86764 4 Skin 0.09 protein_coding synonymous_variant LOW 288A>G Lys96Lys
M0016813 JMLEJLIO_00103 86823 4 Skin 0.09 protein_coding missense_variant MODERATE 347T>C Ile116Thr
M0016814 JMLEJLIO_00103 86846 4 Skin 0.09 protein_coding missense_variant MODERATE 370A>G Ser124Gly
M0016815 JMLEJLIO_00103 86888 4 Skin 0.09 protein_coding missense_variant MODERATE 412A>G Ile138Val
M0016816 JMLEJLIO_00103 86975 4 Skin 0.09 protein_coding stop_lost&splice_region_variant HIGH 499T>C Ter167Argext*?
M0016817 JMLEJLIO_00104 86980 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -446C>T None
M0016818 JMLEJLIO_00104 87036 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -390C>T None
M0016819 JMLEJLIO_00104 87119 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -307A>T None
M0016820 JMLEJLIO_00104 87150 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -276A>G None
M0016821 JMLEJLIO_00104 87197 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -229G>T None
M0016822 JMLEJLIO_00104 87201 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -225G>A None
M0016823 JMLEJLIO_00104 87293 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -133C>T None
M0016824 JMLEJLIO_00104 87313 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -113A>T None
M0016825 JMLEJLIO_00104 87317 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -109G>A None
M0016826 JMLEJLIO_00104 87331 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -95G>A None
M0016827 JMLEJLIO_00104 87367 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -59G>A None
M0016828 JMLEJLIO_00104 87400 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -26T>C None
M0016829 JMLEJLIO_00104 87469 4 Skin 0.09 protein_coding missense_variant MODERATE 44A>C Tyr15Ser
M0016830 JMLEJLIO_00104 87518 4 Skin 0.09 protein_coding synonymous_variant LOW 93T>C Asp31Asp
M0016831 JMLEJLIO_00104 87544 4 Skin 0.09 protein_coding missense_variant MODERATE 119T>C Phe40Ser
M0016832 JMLEJLIO_00104 87674 4 Skin 0.09 protein_coding synonymous_variant LOW 249C>A Val83Val
M0016833 JMLEJLIO_00104 87782 4 Skin 0.09 protein_coding synonymous_variant LOW 357T>A Ala119Ala
M0016834 JMLEJLIO_00104 87802 4 Skin 0.09 protein_coding missense_variant MODERATE 377T>A Ile126Lys
M0016835 JMLEJLIO_00104 87950 4 Skin 0.09 protein_coding missense_variant MODERATE 525C>A Asn175Lys
M0016836 JMLEJLIO_00104 87951 4 Skin 0.09 protein_coding missense_variant MODERATE 526T>G Phe176Val
M0016837 JMLEJLIO_00105 88063 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -53C>A None
M0016838 JMLEJLIO_00105 88092 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -24G>A None
M0016839 JMLEJLIO_00105 88094 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -22A>G None
M0016840 JMLEJLIO_00105 88188 4 Skin 0.09 protein_coding missense_variant MODERATE 73A>C Lys25Gln
M0016841 JMLEJLIO_00105 88340 4 Skin 0.09 protein_coding synonymous_variant LOW 225G>A Arg75Arg
M0016842 JMLEJLIO_00105 88472 4 Skin 0.09 protein_coding missense_variant MODERATE 357C>A His119Gln
M0016843 JMLEJLIO_00106 88567 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -234C>G None
M0016844 JMLEJLIO_00106 88575 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -226A>G None
M0016845 JMLEJLIO_00106 88592 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -209C>T None
M0016846 JMLEJLIO_00106 88600 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -201C>T None
M0016847 JMLEJLIO_00106 88609 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -192G>A None
M0016848 JMLEJLIO_00106 88623 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -178G>A None
M0016849 JMLEJLIO_00106 88837 4 Skin 0.09 protein_coding missense_variant MODERATE 37T>A Phe13Ile
M0016850 JMLEJLIO_00106 88963 4 Skin 0.09 protein_coding stop_gained HIGH 163G>T Glu55*
M0016851 JMLEJLIO_00106 89005 4 Skin 0.09 protein_coding missense_variant MODERATE 205G>A Gly69Ser
M0016852 JMLEJLIO_00106 89029 4 Skin 0.09 protein_coding missense_variant MODERATE 229A>T Asn77Tyr
M0016853 JMLEJLIO_00106 89034 4 Skin 0.09 protein_coding synonymous_variant LOW 234T>C Asp78Asp
M0016854 JMLEJLIO_00106 89035 4 Skin 0.09 protein_coding missense_variant MODERATE 235A>T Ser79Cys
M0016855 JMLEJLIO_00106 89038 4 Skin 0.09 protein_coding stop_gained HIGH 238A>T Arg80*
M0016856 JMLEJLIO_00106 89064 4 Skin 0.09 protein_coding synonymous_variant LOW 264T>C Leu88Leu
M0016857 JMLEJLIO_00106 89132 4 Skin 0.09 protein_coding missense_variant MODERATE 332T>C Leu111Ser
M0016858 JMLEJLIO_00106 89152 4 Skin 0.09 protein_coding missense_variant MODERATE 352G>A Val118Ile
M0016859 JMLEJLIO_00106 89159 4 Skin 0.09 protein_coding missense_variant MODERATE 359A>G Asn120Ser
M0016860 JMLEJLIO_00106 89356 4 Skin 0.09 protein_coding missense_variant MODERATE 556C>T Pro186Ser
M0016861 JMLEJLIO_00106 89385 4 Skin 0.09 protein_coding missense_variant MODERATE 585A>C Lys195Asn
M0016862 JMLEJLIO_00106 89431 4 Skin 0.09 protein_coding synonymous_variant LOW 631T>C Leu211Leu
M0016863 JMLEJLIO_00106 89504 4 Skin 0.09 protein_coding missense_variant MODERATE 704C>T Thr235Ile
M0016864 JMLEJLIO_00106 89519 4 Skin 0.09 protein_coding missense_variant MODERATE 719T>C Phe240Ser
M0016865 JMLEJLIO_00106 89606 4 Skin 0.09 protein_coding missense_variant MODERATE 806G>T Arg269Ile
M0016866 JMLEJLIO_00106 89645 4 Skin 0.09 protein_coding missense_variant MODERATE 845A>C Asn282Thr
M0016867 JMLEJLIO_00106 89646 4 Skin 0.09 protein_coding synonymous_variant LOW 846C>T Asn282Asn
M0016868 JMLEJLIO_00106 89681 4 Skin 0.09 protein_coding missense_variant MODERATE 881A>G Asp294Gly
M0016869 JMLEJLIO_00106 89719 3 Skin 0.07 protein_coding missense_variant MODERATE 919G>A Ala307Thr
M0016870 JMLEJLIO_00106 89776 3 Skin 0.07 protein_coding missense_variant MODERATE 976G>A Gly326Ser
M0016871 JMLEJLIO_00095 79005 4 Skin 0.09 protein_coding missense_variant MODERATE 301A>T Ile101Leu
M0016872 JMLEJLIO_00095 79094 4 Skin 0.09 protein_coding synonymous_variant LOW 390C>T Leu130Leu
M0016873 JMLEJLIO_00095 79174 5 Skin 0.11 protein_coding missense_variant MODERATE 470C>T Thr157Ile
M0016874 JMLEJLIO_00095 79410 4 Skin 0.09 protein_coding missense_variant MODERATE 706G>A Ala236Thr
M0016875 JMLEJLIO_00095 79465 4 Skin 0.09 protein_coding missense_variant MODERATE 761T>G Met254Arg
M0016876 JMLEJLIO_00095 79541 4 Skin 0.09 protein_coding missense_variant MODERATE 837T>A Asn279Lys
M0016877 JMLEJLIO_00095 79586 4 Skin 0.09 protein_coding synonymous_variant LOW 882G>A Leu294Leu
M0016878 JMLEJLIO_00095 79658 4 Skin 0.09 protein_coding synonymous_variant LOW 954T>C Asp318Asp
M0016879 JMLEJLIO_00095 79694 4 Skin 0.09 protein_coding synonymous_variant LOW 990C>T Asn330Asn
M0016880 JMLEJLIO_00095 79807 4 Skin 0.09 protein_coding missense_variant MODERATE 1103A>G Asn368Ser
M0016881 JMLEJLIO_00095 79847 4 Skin 0.09 protein_coding missense_variant MODERATE 1143A>C Glu381Asp
M0016882 JMLEJLIO_00095 79957 4 Skin 0.09 protein_coding missense_variant MODERATE 1253G>A Arg418Gln
M0016883 JMLEJLIO_00095 80031 4 Skin 0.09 protein_coding missense_variant MODERATE 1327A>G Ser443Gly
M0016884 JMLEJLIO_00095 80043 4 Skin 0.09 protein_coding missense_variant MODERATE 1339C>T His447Tyr
M0016885 JMLEJLIO_00095 80046 4 Skin 0.09 protein_coding missense_variant MODERATE 1342G>A Val448Met
M0016886 JMLEJLIO_00095 80089 4 Skin 0.09 protein_coding missense_variant MODERATE 1385T>C Val462Ala
M0016887 JMLEJLIO_00095 80264 5 Skin 0.11 protein_coding synonymous_variant LOW 1560T>C Gly520Gly
M0016888 JMLEJLIO_00095 80276 5 Skin 0.11 protein_coding missense_variant MODERATE 1572C>A Asp524Glu
M0016889 JMLEJLIO_00095 80438 4 Skin 0.09 protein_coding synonymous_variant LOW 1734T>C Tyr578Tyr
M0016890 JMLEJLIO_00095 80442 4 Skin 0.09 protein_coding missense_variant MODERATE 1738G>A Val580Met
M0016891 JMLEJLIO_00095 80452 4 Skin 0.09 protein_coding missense_variant MODERATE 1748A>G Lys583Arg
M0016892 JMLEJLIO_00095 80502 4 Skin 0.09 protein_coding missense_variant MODERATE 1798G>A Val600Ile
M0016893 JMLEJLIO_00095 80508 4 Skin 0.09 protein_coding missense_variant MODERATE 1804G>A Val602Ile
M0016894 JMLEJLIO_00095 80532 4 Skin 0.09 protein_coding missense_variant MODERATE 1828G>A Ala610Thr
M0016895 JMLEJLIO_00095 80561 4 Skin 0.09 protein_coding synonymous_variant LOW 1857G>T Arg619Arg
M0016896 JMLEJLIO_00095 80627 4 Skin 0.09 protein_coding missense_variant MODERATE 1923G>T Met641Ile
M0016897 JMLEJLIO_00090 80753 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4979T>G None
M0016898 JMLEJLIO_00096 80821 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3T>C None
M0016899 JMLEJLIO_00096 80875 4 Skin 0.09 protein_coding missense_variant MODERATE 52A>C Asn18His
M0016900 JMLEJLIO_00096 80880 4 Skin 0.09 protein_coding missense_variant MODERATE 57T>A Phe19Leu
M0016901 JMLEJLIO_00096 80881 4 Skin 0.09 protein_coding missense_variant MODERATE 58A>G Met20Val
M0016902 JMLEJLIO_00096 80893 4 Skin 0.09 protein_coding missense_variant MODERATE 70T>C Phe24Leu
M0016903 JMLEJLIO_00096 80926 4 Skin 0.09 protein_coding missense_variant MODERATE 103T>C Ser35Pro
M0016904 JMLEJLIO_00096 80949 4 Skin 0.09 protein_coding synonymous_variant LOW 126A>G Leu42Leu
M0016905 JMLEJLIO_00096 81095 4 Skin 0.09 protein_coding missense_variant MODERATE 272A>G Asn91Ser
M0016906 JMLEJLIO_00096 81130 4 Skin 0.09 protein_coding missense_variant MODERATE 307G>A Gly103Ser
M0016907 JMLEJLIO_00097 81300 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -410T>C None
M0016908 JMLEJLIO_00097 81395 4 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -315A>C None
M0016909 JMLEJLIO_00097 81469 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -241C>A None
M0016910 JMLEJLIO_00097 81472 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -238C>T None
M0016911 JMLEJLIO_00097 81478 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -232A>C None
M0016912 JMLEJLIO_00097 81514 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -196A>C None
M0016913 JMLEJLIO_00097 81527 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -183G>A None
M0016914 JMLEJLIO_00097 81528 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -182T>C None
M0016915 JMLEJLIO_00097 81542 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -168A>G None
M0016916 JMLEJLIO_00097 81543 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -167C>T None
M0016917 JMLEJLIO_00097 81589 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -121C>T None
M0016918 JMLEJLIO_00097 81599 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -111T>C None
M0016919 JMLEJLIO_00097 81618 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -92T>C None
M0016920 JMLEJLIO_00097 81636 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -74T>A None
M0016921 JMLEJLIO_00097 81671 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -39T>C None
M0016922 JMLEJLIO_00097 81699 5 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -11C>T None
M0016923 JMLEJLIO_00097 81733 5 Skin 0.11 protein_coding missense_variant MODERATE 24C>A Phe8Leu
M0016924 JMLEJLIO_00097 81749 5 Skin 0.11 protein_coding missense_variant MODERATE 40T>G Cys14Gly
M0016925 JMLEJLIO_00097 81892 5 Skin 0.11 protein_coding synonymous_variant LOW 183C>T Ile61Ile
M0016926 JMLEJLIO_00097 81948 5 Skin 0.11 protein_coding missense_variant MODERATE 239T>C Val80Ala
M0016927 JMLEJLIO_00097 82061 5 Skin 0.11 protein_coding missense_variant MODERATE 352A>G Lys118Glu
M0016928 JMLEJLIO_00097 82065 5 Skin 0.11 protein_coding missense_variant MODERATE 356T>G Leu119Arg
M0016929 JMLEJLIO_00097 82093 5 Skin 0.11 protein_coding synonymous_variant LOW 384T>C Thr128Thr
M0016930 JMLEJLIO_00097 82295 4 Skin 0.09 protein_coding missense_variant MODERATE 586A>G Thr196Ala
M0016931 JMLEJLIO_00097 82365 4 Skin 0.09 protein_coding missense_variant MODERATE 656A>G His219Arg
M0016932 JMLEJLIO_00097 82432 4 Skin 0.09 protein_coding synonymous_variant LOW 723C>T Asp241Asp
M0016933 JMLEJLIO_00097 82544 5 Skin 0.11 protein_coding missense_variant MODERATE 835G>T Ala279Ser
M0016934 JMLEJLIO_00097 82557 5 Skin 0.11 protein_coding missense_variant MODERATE 848C>T Ala283Val
M0016935 JMLEJLIO_00097 82564 5 Skin 0.11 protein_coding synonymous_variant LOW 855C>T Tyr285Tyr
M0016936 JMLEJLIO_00097 82576 5 Skin 0.11 protein_coding synonymous_variant LOW 867T>C Phe289Phe
M0016937 JMLEJLIO_00097 82612 5 Skin 0.11 protein_coding synonymous_variant LOW 903C>T Gly301Gly
M0016938 JMLEJLIO_00097 82687 4 Skin 0.09 protein_coding synonymous_variant LOW 978A>G Val326Val
M0016939 JMLEJLIO_00097 82690 4 Skin 0.09 protein_coding synonymous_variant LOW 981A>G Leu327Leu
M0016940 JMLEJLIO_00097 82700 4 Skin 0.09 protein_coding missense_variant MODERATE 991A>G Thr331Ala
M0016941 JMLEJLIO_00097 82711 4 Skin 0.09 protein_coding synonymous_variant LOW 1002G>A Leu334Leu
M0016942 JMLEJLIO_00097 82732 4 Skin 0.09 protein_coding synonymous_variant LOW 1023C>T Gly341Gly
M0016943 JMLEJLIO_00097 82824 4 Skin 0.09 protein_coding missense_variant MODERATE 1115T>C Leu372Ser
M0016944 JMLEJLIO_00097 82855 4 Skin 0.09 protein_coding synonymous_variant LOW 1146C>T Ile382Ile
M0016945 JMLEJLIO_00097 82858 4 Skin 0.09 protein_coding synonymous_variant LOW 1149T>C Ala383Ala
M0016946 JMLEJLIO_00097 82875 4 Skin 0.09 protein_coding missense_variant MODERATE 1166T>C Val389Ala
M0016947 JMLEJLIO_00097 83058 4 Skin 0.09 protein_coding missense_variant MODERATE 1349C>T Ala450Val
M0016948 JMLEJLIO_00097 83108 4 Skin 0.09 protein_coding missense_variant MODERATE 1399A>G Met467Val
M0016949 JMLEJLIO_00097 83224 4 Skin 0.09 protein_coding synonymous_variant LOW 1515C>A Arg505Arg
M0016950 JMLEJLIO_00093 77690 3 Skin 0.07 protein_coding synonymous_variant LOW 741C>T Tyr247Tyr
M0016951 JMLEJLIO_00093 77694 3 Skin 0.07 protein_coding missense_variant MODERATE 745G>A Gly249Arg
M0016952 JMLEJLIO_00093 77744 3 Skin 0.07 protein_coding synonymous_variant LOW 795T>C Ile265Ile
M0016953 JMLEJLIO_00095 78803 4 Skin 0.09 protein_coding synonymous_variant LOW 99C>A Gly33Gly
M0016954 JMLEJLIO_00095 78806 4 Skin 0.09 protein_coding synonymous_variant LOW 102A>G Lys34Lys
M0016955 JMLEJLIO_00095 78810 4 Skin 0.09 protein_coding missense_variant MODERATE 106T>A Tyr36Asn
M0016956 JMLEJLIO_00095 78851 4 Skin 0.09 protein_coding synonymous_variant LOW 147G>A Gln49Gln
M0016957 JMLEJLIO_00094 78429 3 Skin 0.07 protein_coding missense_variant MODERATE 476T>C Val159Ala
M0016958 JMLEJLIO_00094 78492 3 Skin 0.07 protein_coding missense_variant MODERATE 539A>G Lys180Arg
M0016959 JMLEJLIO_00094 78493 3 Skin 0.07 protein_coding missense_variant MODERATE 540A>C Lys180Asn
M0016960 JMLEJLIO_00094 78547 3 Skin 0.07 protein_coding synonymous_variant LOW 594A>G Val198Val
M0016961 JMLEJLIO_00094 78554 3 Skin 0.07 protein_coding missense_variant MODERATE 601T>A Ser201Thr
M0016962 JMLEJLIO_00094 78592 3 Skin 0.07 protein_coding synonymous_variant LOW 639C>T Phe213Phe
M0016963 JMLEJLIO_00094 78598 3 Skin 0.07 protein_coding synonymous_variant LOW 645A>G Lys215Lys
M0016964 JMLEJLIO_00094 78610 3 Skin 0.07 protein_coding missense_variant MODERATE 657A>T Leu219Phe
M0016965 JMLEJLIO_00094 78626 3 Skin 0.07 protein_coding missense_variant MODERATE 673C>T Arg225Cys
M0016966 JMLEJLIO_00095 78955 3 Skin 0.07 protein_coding missense_variant MODERATE 251A>G Lys84Arg






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition
JMLEJLIO_00047 VFG001314 Aureolysin 74.5 4.4e-206 1 466 1.0 0.9155 Exoenzyme zinc metalloproteinase aureolysin experiment
JMLEJLIO_00077 VFG001300 Capsule 71.1 6.2e-245 1 602 0.9983 0.9918 Immune modulation type 8 capsular polysaccharide synthesis protein Cap8D experiment
JMLEJLIO_00047 VFG001314 Aureolysin 74.5 3.3e-205 1 466 1.0 0.9155 Exoenzyme zinc metalloproteinase aureolysin prediction
JMLEJLIO_00075 VFG004457 Capsule 75.4 2e-94 3 230 0.9913 0.9785 Immune modulation polysaccharide biosynthesis tyrosine autokinase prediction
JMLEJLIO_00077 VFG002966 Capsule 81 1.1e-277 1 600 0.995 1.0017 Immune modulation polysaccharide biosynthesis protein prediction
JMLEJLIO_00088 VFG005097 Capsule 76.3 4.9e-167 1 374 0.9842 0.992 Immune modulation DegT/DnrJ/EryC1/StrS family aminotransferase prediction







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
JMLEJLIO_00047 PHI:11228 aur 75.3 8e-207 1 466 1.0000 0.9155 rodents skin infection; food poisoning; respiratory disease zinc metalloproteinase aureolysin increased virulence (hypervirulence)
JMLEJLIO_00049 PHI:10470 arcA 83.7 2.7e-206 1 411 1.0000 1.0000 rodents skin infection arginine deiminase unaffected pathogenicity






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
JMLEJLIO_00080 QQB98955.1|GT4 100 4.78e-289 1 394 1 1
JMLEJLIO_00081 QRJ66833.1|GT2 100 6.09e-220 1 292 1 1
JMLEJLIO_00085 QRJ67468.1|GT4 99.7 7.53e-259 4 378 0.9921 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term