Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1817
  Reference Plasmid   1111525849649755_bin.45__k141_56363
  Reference Plasmid Size   33971
  Reference Plasmid GC Content   0.57
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0017489 JIJAFICA_00003 7055 171 Skin 0.36 protein_coding upstream_gene_variant MODIFIER -2677G>C None
M0017490 JIJAFICA_00007 8804 286 Skin 0.61 protein_coding synonymous_variant LOW 546A>G Leu182Leu
M0017491 JIJAFICA_00007 8974 85 Skin 0.18 protein_coding missense_variant MODERATE 376A>G Lys126Glu
M0017492 JIJAFICA_00007 8981 43 Skin 0.09 protein_coding synonymous_variant LOW 369C>T Ser123Ser
M0017493 JIJAFICA_00009 10170 78 Skin 0.17 protein_coding missense_variant MODERATE 281G>A Gly94Asp
M0017494 JIJAFICA_00009 10202 80 Skin 0.17 protein_coding missense_variant MODERATE 313C>T Pro105Ser
M0017495 JIJAFICA_00006 6694 5 Skin 0.01 protein_coding synonymous_variant LOW 357T>C Ile119Ile
M0017496 JIJAFICA_00006 6702 13 Skin 0.03 protein_coding missense_variant MODERATE 349G>A Val117Ile
M0017497 JIJAFICA_00006 6874 20 Skin 0.04 protein_coding synonymous_variant LOW 177A>G Leu59Leu
M0017498 JIJAFICA_00006 6891 21 Skin 0.04 protein_coding synonymous_variant LOW 160T>C Leu54Leu
M0017499 JIJAFICA_00006 6916 11 Skin 0.02 protein_coding synonymous_variant LOW 135C>T Phe45Phe
M0017500 JIJAFICA_00006 6937 12 Skin 0.03 protein_coding synonymous_variant LOW 114T>C Cys38Cys
M0017501 JIJAFICA_00003 7215 47 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2837T>C None
M0017502 JIJAFICA_00007 7277 11 Skin 0.02 protein_coding synonymous_variant LOW 2073A>G Lys691Lys
M0017503 JIJAFICA_00007 7364 13 Skin 0.03 protein_coding synonymous_variant LOW 1986C>T Asp662Asp
M0017504 JIJAFICA_00007 7384 12 Skin 0.03 protein_coding synonymous_variant LOW 1966C>T Leu656Leu
M0017505 JIJAFICA_00007 7417 52 Skin 0.11 protein_coding synonymous_variant LOW 1933A>C Arg645Arg
M0017506 JIJAFICA_00007 7419 12 Skin 0.03 protein_coding missense_variant MODERATE 1931G>A Arg644Lys
M0017507 JIJAFICA_00007 7457 12 Skin 0.03 protein_coding synonymous_variant LOW 1893T>C Asn631Asn
M0017508 JIJAFICA_00007 7498 11 Skin 0.02 protein_coding missense_variant MODERATE 1852G>T Val618Phe
M0017509 JIJAFICA_00007 7511 12 Skin 0.03 protein_coding synonymous_variant LOW 1839T>C Asp613Asp
M0017510 JIJAFICA_00007 7523 12 Skin 0.03 protein_coding synonymous_variant LOW 1827C>T Arg609Arg
M0017511 JIJAFICA_00007 7547 12 Skin 0.03 protein_coding synonymous_variant LOW 1803C>T Gly601Gly
M0017512 JIJAFICA_00007 7550 12 Skin 0.03 protein_coding synonymous_variant LOW 1800C>T Ile600Ile
M0017513 JIJAFICA_00007 7571 22 Skin 0.05 protein_coding synonymous_variant LOW 1779A>G Pro593Pro
M0017514 JIJAFICA_00007 7583 13 Skin 0.03 protein_coding synonymous_variant LOW 1767C>T His589His
M0017515 JIJAFICA_00007 7598 12 Skin 0.03 protein_coding synonymous_variant LOW 1752G>C Ala584Ala
M0017516 JIJAFICA_00007 7628 13 Skin 0.03 protein_coding synonymous_variant LOW 1722G>A Glu574Glu
M0017517 JIJAFICA_00007 7667 11 Skin 0.02 protein_coding synonymous_variant LOW 1683C>G Ala561Ala
M0017518 JIJAFICA_00007 7703 23 Skin 0.05 protein_coding synonymous_variant LOW 1647T>C Ala549Ala
M0017519 JIJAFICA_00007 7712 12 Skin 0.03 protein_coding synonymous_variant LOW 1638C>T Val546Val
M0017520 JIJAFICA_00007 7751 21 Skin 0.04 protein_coding synonymous_variant LOW 1599A>G Glu533Glu
M0017521 JIJAFICA_00007 7796 12 Skin 0.03 protein_coding synonymous_variant LOW 1554C>T Asp518Asp
M0017522 JIJAFICA_00007 7799 58 Skin 0.12 protein_coding synonymous_variant LOW 1551T>C Leu517Leu
M0017523 JIJAFICA_00007 7934 14 Skin 0.03 protein_coding synonymous_variant LOW 1416C>T Tyr472Tyr
M0017524 JIJAFICA_00007 7988 33 Skin 0.07 protein_coding synonymous_variant LOW 1362C>T Asp454Asp
M0017525 JIJAFICA_00007 8043 31 Skin 0.07 protein_coding missense_variant MODERATE 1307G>A Arg436His
M0017526 JIJAFICA_00007 8102 15 Skin 0.03 protein_coding synonymous_variant LOW 1248C>T Val416Val
M0017527 JIJAFICA_00007 8132 32 Skin 0.07 protein_coding synonymous_variant LOW 1218G>T Ser406Ser
M0017528 JIJAFICA_00007 8156 13 Skin 0.03 protein_coding synonymous_variant LOW 1194C>A Val398Val
M0017529 JIJAFICA_00007 8192 29 Skin 0.06 protein_coding synonymous_variant LOW 1158A>G Lys386Lys
M0017530 JIJAFICA_00007 8270 12 Skin 0.03 protein_coding synonymous_variant LOW 1080G>A Glu360Glu
M0017531 JIJAFICA_00007 8279 12 Skin 0.03 protein_coding synonymous_variant LOW 1071G>C Gly357Gly
M0017532 JIJAFICA_00007 8291 12 Skin 0.03 protein_coding synonymous_variant LOW 1059G>A Pro353Pro
M0017533 JIJAFICA_00007 8309 12 Skin 0.03 protein_coding synonymous_variant LOW 1041A>G Glu347Glu
M0017534 JIJAFICA_00007 8330 12 Skin 0.03 protein_coding synonymous_variant LOW 1020T>C Asp340Asp
M0017535 JIJAFICA_00007 8336 12 Skin 0.03 protein_coding synonymous_variant LOW 1014G>A Pro338Pro
M0017536 JIJAFICA_00007 8366 13 Skin 0.03 protein_coding synonymous_variant LOW 984A>G Ser328Ser
M0017537 JIJAFICA_00007 8369 13 Skin 0.03 protein_coding synonymous_variant LOW 981C>G Gly327Gly
M0017538 JIJAFICA_00007 8408 13 Skin 0.03 protein_coding synonymous_variant LOW 942C>T Ile314Ile
M0017539 JIJAFICA_00007 8417 13 Skin 0.03 protein_coding synonymous_variant LOW 933T>C Cys311Cys
M0017540 JIJAFICA_00007 8543 13 Skin 0.03 protein_coding synonymous_variant LOW 807G>A Ala269Ala
M0017541 JIJAFICA_00007 8548 13 Skin 0.03 protein_coding missense_variant MODERATE 802A>G Ile268Val
M0017542 JIJAFICA_00007 8626 38 Skin 0.08 protein_coding missense_variant MODERATE 724A>G Ile242Val
M0017543 JIJAFICA_00007 8639 38 Skin 0.08 protein_coding synonymous_variant LOW 711A>G Pro237Pro
M0017544 JIJAFICA_00007 8717 41 Skin 0.09 protein_coding synonymous_variant LOW 633T>C Ile211Ile
M0017545 JIJAFICA_00007 8777 16 Skin 0.03 protein_coding synonymous_variant LOW 573C>T Val191Val
M0017546 JIJAFICA_00007 8779 16 Skin 0.03 protein_coding missense_variant MODERATE 571G>A Val191Ile
M0017547 JIJAFICA_00007 8858 16 Skin 0.03 protein_coding synonymous_variant LOW 492A>G Val164Val
M0017548 JIJAFICA_00007 8930 21 Skin 0.04 protein_coding synonymous_variant LOW 420C>T Leu140Leu
M0017549 JIJAFICA_00007 8963 19 Skin 0.04 protein_coding synonymous_variant LOW 387A>G Glu129Glu
M0017550 JIJAFICA_00007 9050 14 Skin 0.03 protein_coding synonymous_variant LOW 300T>C Ser100Ser
M0017551 JIJAFICA_00007 9068 14 Skin 0.03 protein_coding synonymous_variant LOW 282C>T Ala94Ala
M0017552 JIJAFICA_00007 9159 18 Skin 0.04 protein_coding missense_variant MODERATE 191G>A Arg64Lys
M0017553 JIJAFICA_00007 9212 16 Skin 0.03 protein_coding synonymous_variant LOW 138G>A Leu46Leu
M0017554 JIJAFICA_00007 9239 17 Skin 0.04 protein_coding synonymous_variant LOW 111T>C Val37Val
M0017555 JIJAFICA_00007 9269 80 Skin 0.17 protein_coding synonymous_variant LOW 81G>A Pro27Pro
M0017556 JIJAFICA_00003 9359 13 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4981G>T None
M0017557 JIJAFICA_00013 13306 16 Skin 0.03 protein_coding missense_variant MODERATE 112G>A Val38Ile
M0017558 JIJAFICA_00013 13346 14 Skin 0.03 protein_coding missense_variant MODERATE 72C>G Phe24Leu
M0017559 JIJAFICA_00013 13352 14 Skin 0.03 protein_coding synonymous_variant LOW 66T>C Ala22Ala
M0017560 JIJAFICA_00013 13367 14 Skin 0.03 protein_coding synonymous_variant LOW 51A>C Leu17Leu
M0017561 JIJAFICA_00013 13379 14 Skin 0.03 protein_coding synonymous_variant LOW 39T>C Ala13Ala
M0017562 JIJAFICA_00013 13392 14 Skin 0.03 protein_coding missense_variant MODERATE 26C>T Ala9Val
M0017563 JIJAFICA_00013 13393 14 Skin 0.03 protein_coding missense_variant MODERATE 25G>A Ala9Thr
M0017564 JIJAFICA_00013 13398 14 Skin 0.03 protein_coding missense_variant MODERATE 20T>C Val7Ala
M0017565 JIJAFICA_00007 13465 14 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4116G>A None
M0017566 JIJAFICA_00007 13510 14 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4161T>A None
M0017567 JIJAFICA_00007 13533 14 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4184G>A None
M0017568 JIJAFICA_00007 13550 14 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4201T>C None
M0017569 JIJAFICA_00007 13589 13 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4240G>A None
M0017570 JIJAFICA_00007 13649 13 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4300C>T None
M0017571 JIJAFICA_00014 13685 17 Skin 0.04 protein_coding synonymous_variant LOW 21A>G Leu7Leu
M0017572 JIJAFICA_00014 13694 34 Skin 0.07 protein_coding missense_variant MODERATE 30A>G Ile10Met
M0017573 JIJAFICA_00014 13736 16 Skin 0.03 protein_coding synonymous_variant LOW 72A>G Val24Val
M0017574 JIJAFICA_00014 13739 13 Skin 0.03 protein_coding synonymous_variant LOW 75C>T Ser25Ser
M0017575 JIJAFICA_00014 13876 9 Skin 0.02 protein_coding missense_variant MODERATE 212C>G Ser71Cys
M0017576 JIJAFICA_00014 13892 9 Skin 0.02 protein_coding synonymous_variant LOW 228A>G Ala76Ala
M0017577 JIJAFICA_00014 13910 10 Skin 0.02 protein_coding synonymous_variant LOW 246T>C Val82Val
M0017578 JIJAFICA_00014 13911 10 Skin 0.02 protein_coding missense_variant MODERATE 247A>G Asn83Asp
M0017579 JIJAFICA_00014 13970 31 Skin 0.07 protein_coding missense_variant MODERATE 306A>G Ile102Met
M0017580 JIJAFICA_00014 14138 10 Skin 0.02 protein_coding synonymous_variant LOW 474A>G Val158Val
M0017581 JIJAFICA_00014 14153 8 Skin 0.02 protein_coding synonymous_variant LOW 489A>G Leu163Leu
M0017582 JIJAFICA_00014 14164 8 Skin 0.02 protein_coding missense_variant MODERATE 500T>C Ile167Thr
M0017583 JIJAFICA_00014 14240 7 Skin 0.01 protein_coding synonymous_variant LOW 576G>C Leu192Leu
M0017584 JIJAFICA_00014 14255 7 Skin 0.01 protein_coding synonymous_variant LOW 591C>T Phe197Phe
M0017585 JIJAFICA_00014 14270 13 Skin 0.03 protein_coding synonymous_variant LOW 606C>T Gly202Gly
M0017586 JIJAFICA_00014 14312 8 Skin 0.02 protein_coding synonymous_variant LOW 648G>A Val216Val
M0017587 JIJAFICA_00007 7586 9 Skin 0.02 protein_coding missense_variant MODERATE 1764A>C Glu588Asp
M0017588 JIJAFICA_00007 7844 9 Skin 0.02 protein_coding synonymous_variant LOW 1506C>T Gly502Gly
M0017589 JIJAFICA_00007 8510 21 Skin 0.04 protein_coding synonymous_variant LOW 840C>T Ala280Ala
M0017590 JIJAFICA_00007 8630 26 Skin 0.06 protein_coding synonymous_variant LOW 720G>A Gly240Gly
M0017591 JIJAFICA_00007 8633 26 Skin 0.06 protein_coding synonymous_variant LOW 717C>G Thr239Thr
M0017592 JIJAFICA_00007 8636 26 Skin 0.06 protein_coding synonymous_variant LOW 714C>T Leu238Leu
M0017593 JIJAFICA_00007 8642 26 Skin 0.06 protein_coding synonymous_variant LOW 708C>T His236His
M0017594 JIJAFICA_00007 8692 26 Skin 0.06 protein_coding synonymous_variant LOW 658C>T Leu220Leu
M0017595 JIJAFICA_00007 8729 26 Skin 0.06 protein_coding synonymous_variant LOW 621C>T Asp207Asp
M0017596 JIJAFICA_00007 9149 21 Skin 0.04 protein_coding synonymous_variant LOW 201C>T Arg67Arg
M0017597 JIJAFICA_00007 9169 21 Skin 0.04 protein_coding synonymous_variant LOW 181C>T Leu61Leu
M0017598 JIJAFICA_00007 9173 21 Skin 0.04 protein_coding synonymous_variant LOW 177G>A Ala59Ala
M0017599 JIJAFICA_00009 10172 17 Skin 0.04 protein_coding missense_variant MODERATE 283G>C Gly95Arg
M0017600 JIJAFICA_00009 10186 17 Skin 0.04 protein_coding synonymous_variant LOW 297C>G Pro99Pro
M0017601 JIJAFICA_00009 10224 15 Skin 0.03 protein_coding missense_variant MODERATE 335A>G Asp112Gly
M0017602 JIJAFICA_00009 10256 16 Skin 0.03 protein_coding missense_variant MODERATE 367G>A Val123Ile
M0017603 JIJAFICA_00010 10905 57 Skin 0.12 protein_coding synonymous_variant LOW 324T>C Arg108Arg
M0017604 JIJAFICA_00010 10921 16 Skin 0.03 protein_coding missense_variant MODERATE 340G>A Ala114Thr
M0017605 JIJAFICA_00010 10929 16 Skin 0.03 protein_coding synonymous_variant LOW 348T>C Arg116Arg
M0017606 JIJAFICA_00010 11094 15 Skin 0.03 protein_coding synonymous_variant LOW 513C>T Asp171Asp
M0017607 JIJAFICA_00010 11139 14 Skin 0.03 protein_coding synonymous_variant LOW 558A>C Pro186Pro
M0017608 JIJAFICA_00010 11144 14 Skin 0.03 protein_coding missense_variant MODERATE 563T>C Val188Ala
M0017609 JIJAFICA_00010 11154 13 Skin 0.03 protein_coding synonymous_variant LOW 573C>T Val191Val
M0017610 JIJAFICA_00010 11171 56 Skin 0.12 protein_coding missense_variant MODERATE 590T>C Val197Ala
M0017611 JIJAFICA_00007 13072 33 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3723A>G None
M0017612 JIJAFICA_00007 13099 31 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3750G>T None
M0017613 JIJAFICA_00007 13104 7 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3755T>C None
M0017614 JIJAFICA_00007 13133 34 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3784C>T None
M0017615 JIJAFICA_00009 10309 55 Skin 0.12 protein_coding synonymous_variant LOW 420C>T His140His
M0017616 JIJAFICA_00009 10387 52 Skin 0.11 protein_coding synonymous_variant LOW 498G>A Gln166Gln
M0017617 JIJAFICA_00007 13507 28 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4158A>T None
M0017618 JIJAFICA_00001 729 7 Skin 0.01 protein_coding missense_variant MODERATE 418G>T Ala140Ser
M0017619 JIJAFICA_00004 1491 10 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3116T>C None
M0017620 JIJAFICA_00003 1712 10 Skin 0.02 protein_coding synonymous_variant LOW 2667T>C Gly889Gly
M0017621 JIJAFICA_00003 1955 11 Skin 0.02 protein_coding synonymous_variant LOW 2424A>G Leu808Leu
M0017622 JIJAFICA_00003 2120 13 Skin 0.03 protein_coding synonymous_variant LOW 2259T>C Thr753Thr
M0017623 JIJAFICA_00003 3395 5 Skin 0.01 protein_coding synonymous_variant LOW 984C>T Val328Val
M0017624 JIJAFICA_00003 3413 8 Skin 0.02 protein_coding synonymous_variant LOW 966A>C Val322Val
M0017625 JIJAFICA_00003 3441 5 Skin 0.01 protein_coding missense_variant MODERATE 938C>T Ala313Val
M0017626 JIJAFICA_00003 3538 13 Skin 0.03 protein_coding synonymous_variant LOW 841T>C Leu281Leu
M0017627 JIJAFICA_00003 3974 18 Skin 0.04 protein_coding synonymous_variant LOW 405T>C Gly135Gly
M0017628 JIJAFICA_00003 4007 5 Skin 0.01 protein_coding synonymous_variant LOW 372A>G Gln124Gln
M0017629 JIJAFICA_00003 4539 24 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -161T>C None
M0017630 JIJAFICA_00003 4551 6 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -173C>T None
M0017631 JIJAFICA_00004 4652 22 Skin 0.05 protein_coding synonymous_variant LOW 46T>C Leu16Leu
M0017632 JIJAFICA_00005 5438 6 Skin 0.01 protein_coding missense_variant MODERATE 43A>G Ile15Val
M0017633 JIJAFICA_00005 5692 7 Skin 0.01 protein_coding synonymous_variant LOW 297C>T Asp99Asp
M0017634 JIJAFICA_00005 5845 9 Skin 0.02 protein_coding synonymous_variant LOW 450T>C Asp150Asp
M0017635 JIJAFICA_00006 6065 7 Skin 0.01 protein_coding missense_variant MODERATE 986T>C Val329Ala
M0017636 JIJAFICA_00006 6262 5 Skin 0.01 protein_coding synonymous_variant LOW 789A>G Gly263Gly
M0017637 JIJAFICA_00006 6282 9 Skin 0.02 protein_coding synonymous_variant LOW 769T>C Leu257Leu
M0017638 JIJAFICA_00006 6325 10 Skin 0.02 protein_coding synonymous_variant LOW 726T>G Gly242Gly
M0017639 JIJAFICA_00006 6354 6 Skin 0.01 protein_coding missense_variant MODERATE 697C>T Leu233Phe
M0017640 JIJAFICA_00006 6361 10 Skin 0.02 protein_coding synonymous_variant LOW 690T>C Tyr230Tyr
M0017641 JIJAFICA_00006 6417 10 Skin 0.02 protein_coding synonymous_variant LOW 634T>C Leu212Leu
M0017642 JIJAFICA_00006 6466 36 Skin 0.08 protein_coding synonymous_variant LOW 585T>C Thr195Thr
M0017643 JIJAFICA_00006 6714 17 Skin 0.04 protein_coding missense_variant MODERATE 337G>A Val113Ile
M0017644 JIJAFICA_00006 6871 9 Skin 0.02 protein_coding synonymous_variant LOW 180G>A Gln60Gln
M0017645 JIJAFICA_00006 6908 9 Skin 0.02 protein_coding missense_variant MODERATE 143T>G Leu48Trp
M0017646 JIJAFICA_00006 6928 9 Skin 0.02 protein_coding synonymous_variant LOW 123C>T Phe41Phe
M0017647 JIJAFICA_00007 7514 9 Skin 0.02 protein_coding synonymous_variant LOW 1836C>T Ala612Ala
M0017648 JIJAFICA_00007 7520 9 Skin 0.02 protein_coding synonymous_variant LOW 1830A>G Glu610Glu
M0017649 JIJAFICA_00007 7766 10 Skin 0.02 protein_coding synonymous_variant LOW 1584C>T Leu528Leu
M0017650 JIJAFICA_00007 8129 15 Skin 0.03 protein_coding synonymous_variant LOW 1221C>T Tyr407Tyr
M0017651 JIJAFICA_00007 8171 14 Skin 0.03 protein_coding synonymous_variant LOW 1179G>C Arg393Arg
M0017652 JIJAFICA_00007 8219 14 Skin 0.03 protein_coding synonymous_variant LOW 1131C>T Pro377Pro
M0017653 JIJAFICA_00007 8240 14 Skin 0.03 protein_coding synonymous_variant LOW 1110A>G Val370Val
M0017654 JIJAFICA_00006 9385 18 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2335A>G None
M0017655 JIJAFICA_00006 9390 18 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2340T>C None
M0017656 JIJAFICA_00008 9544 18 Skin 0.04 protein_coding synonymous_variant LOW 21C>T His7His
M0017657 JIJAFICA_00008 9569 17 Skin 0.04 protein_coding synonymous_variant LOW 46C>T Leu16Leu
M0017658 JIJAFICA_00008 9574 17 Skin 0.04 protein_coding synonymous_variant LOW 51A>G Leu17Leu
M0017659 JIJAFICA_00008 9665 69 Skin 0.15 protein_coding missense_variant MODERATE 142T>C Phe48Leu
M0017660 JIJAFICA_00008 9670 18 Skin 0.04 protein_coding synonymous_variant LOW 147C>T His49His
M0017661 JIJAFICA_00008 9672 18 Skin 0.04 protein_coding missense_variant MODERATE 149G>A Gly50Asp
M0017662 JIJAFICA_00008 9770 72 Skin 0.15 protein_coding missense_variant MODERATE 247C>T Arg83Trp
M0017663 JIJAFICA_00009 9901 20 Skin 0.04 protein_coding synonymous_variant LOW 12G>A Arg4Arg
M0017664 JIJAFICA_00009 10038 18 Skin 0.04 protein_coding missense_variant MODERATE 149A>C Asp50Ala
M0017665 JIJAFICA_00009 10041 18 Skin 0.04 protein_coding missense_variant MODERATE 152G>A Arg51Gln
M0017666 JIJAFICA_00008 9738 17 Skin 0.04 protein_coding missense_variant MODERATE 215G>A Gly72Asp
M0017667 JIJAFICA_00008 9778 49 Skin 0.10 protein_coding synonymous_variant LOW 255G>A Gly85Gly
M0017668 JIJAFICA_00006 9812 49 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2762G>A None
M0017669 JIJAFICA_00010 11020 56 Skin 0.12 protein_coding missense_variant MODERATE 439C>G Arg147Gly
M0017670 JIJAFICA_00023 27937 19 Skin 0.04 protein_coding missense_variant MODERATE 403A>G Thr135Ala
M0017671 JIJAFICA_00023 27956 18 Skin 0.04 protein_coding missense_variant MODERATE 384G>T Glu128Asp
M0017672 JIJAFICA_00023 28312 18 Skin 0.04 protein_coding missense_variant MODERATE 28A>G Met10Val
M0017673 JIJAFICA_00024 29285 18 Skin 0.04 protein_coding missense_variant MODERATE 782C>T Thr261Met
M0017674 JIJAFICA_00025 30264 12 Skin 0.03 protein_coding synonymous_variant LOW 585G>A Ala195Ala
M0017675 JIJAFICA_00026 30850 28 Skin 0.06 protein_coding stop_gained HIGH 1057G>T Gly353*
M0017676 JIJAFICA_00027 32933 6 Skin 0.01 protein_coding missense_variant MODERATE 74C>T Thr25Ile
M0017677 JIJAFICA_00028 33245 79 Skin 0.17 protein_coding synonymous_variant LOW 612C>T Val204Val
M0017678 JIJAFICA_00007 8115 38 Skin 0.08 protein_coding missense_variant MODERATE 1235C>T Ala412Val
M0017679 JIJAFICA_00007 7469 26 Skin 0.06 protein_coding missense_variant MODERATE 1881C>A His627Gln
M0017680 JIJAFICA_00007 7987 30 Skin 0.06 protein_coding missense_variant MODERATE 1363C>G Arg455Gly
M0017681 JIJAFICA_00007 8186 33 Skin 0.07 protein_coding synonymous_variant LOW 1164C>T Asp388Asp
M0017682 JIJAFICA_00009 9905 46 Skin 0.10 protein_coding missense_variant MODERATE 16T>G Ser6Ala
M0017683 JIJAFICA_00006 10453 37 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3403C>T None
M0017684 JIJAFICA_00006 10525 39 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3475T>C None
M0017685 JIJAFICA_00010 10720 40 Skin 0.09 protein_coding missense_variant MODERATE 139T>C Ser47Pro
M0017686 JIJAFICA_00010 10863 40 Skin 0.09 protein_coding stop_gained HIGH 282G>A Trp94*
M0017687 JIJAFICA_00010 11230 53 Skin 0.11 protein_coding missense_variant MODERATE 649C>T Pro217Ser
M0017688 JIJAFICA_00006 11395 47 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4345C>G None
M0017689 JIJAFICA_00006 11558 32 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4508T>C None
M0017690 JIJAFICA_00006 11699 9 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4649C>T None
M0017691 JIJAFICA_00006 11724 9 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4674C>T None
M0017692 JIJAFICA_00011 12065 35 Skin 0.07 protein_coding missense_variant MODERATE 132A>G Ile44Met
M0017693 JIJAFICA_00011 12103 36 Skin 0.08 protein_coding missense_variant MODERATE 170T>C Ile57Thr
M0017694 JIJAFICA_00011 12177 33 Skin 0.07 protein_coding missense_variant MODERATE 244A>G Thr82Ala
M0017695 JIJAFICA_00007 12450 32 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3101T>C None
M0017696 JIJAFICA_00007 12507 25 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3158G>A None
M0017697 JIJAFICA_00012 12760 23 Skin 0.05 protein_coding synonymous_variant LOW 183T>C Arg61Arg
M0017698 JIJAFICA_00012 12827 28 Skin 0.06 protein_coding missense_variant MODERATE 116G>T Arg39Leu
M0017699 JIJAFICA_00012 12897 28 Skin 0.06 protein_coding missense_variant MODERATE 46A>G Ser16Gly
M0017700 JIJAFICA_00007 13432 9 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4083T>C None
M0017701 JIJAFICA_00014 14093 13 Skin 0.03 protein_coding synonymous_variant LOW 429A>G Lys143Lys
M0017702 JIJAFICA_00014 14232 13 Skin 0.03 protein_coding missense_variant MODERATE 568A>G Ile190Val
M0017703 JIJAFICA_00015 14391 20 Skin 0.04 protein_coding missense_variant MODERATE 47C>G Thr16Arg
M0017704 JIJAFICA_00015 14794 8 Skin 0.02 protein_coding synonymous_variant LOW 450C>T Ala150Ala
M0017705 JIJAFICA_00017 16315 20 Skin 0.04 protein_coding synonymous_variant LOW 120G>A Arg40Arg
M0017706 JIJAFICA_00017 16536 16 Skin 0.03 protein_coding missense_variant MODERATE 341A>G Asp114Gly
M0017707 JIJAFICA_00017 16685 12 Skin 0.03 protein_coding missense_variant MODERATE 490G>A Gly164Ser
M0017708 JIJAFICA_00017 16708 18 Skin 0.04 protein_coding synonymous_variant LOW 513T>C Arg171Arg
M0017709 JIJAFICA_00017 16937 17 Skin 0.04 protein_coding missense_variant MODERATE 742T>C Ser248Pro
M0017710 JIJAFICA_00017 17119 8 Skin 0.02 protein_coding synonymous_variant LOW 924C>T Ser308Ser
M0017711 JIJAFICA_00017 17185 8 Skin 0.02 protein_coding synonymous_variant LOW 990C>T Phe330Phe
M0017712 JIJAFICA_00017 17423 10 Skin 0.02 protein_coding missense_variant MODERATE 1228A>G Thr410Ala
M0017713 JIJAFICA_00017 17945 11 Skin 0.02 protein_coding missense_variant MODERATE 1750A>G Thr584Ala
M0017714 JIJAFICA_00017 18008 12 Skin 0.03 protein_coding missense_variant MODERATE 1813A>G Ile605Val
M0017715 JIJAFICA_00014 13848 54 Skin 0.12 protein_coding missense_variant MODERATE 184G>A Gly62Ser
M0017716 JIJAFICA_00014 14252 16 Skin 0.03 protein_coding synonymous_variant LOW 588T>C Tyr196Tyr
M0017717 JIJAFICA_00012 12732 6 Skin 0.01 protein_coding missense_variant MODERATE 211C>T Leu71Phe
M0017718 JIJAFICA_00012 12744 6 Skin 0.01 protein_coding missense_variant MODERATE 199G>A Gly67Ser
M0017719 JIJAFICA_00007 13155 7 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3806G>A None
M0017720 JIJAFICA_00010 10980 15 Skin 0.03 protein_coding synonymous_variant LOW 399C>T Asp133Asp
M0017721 JIJAFICA_00010 10986 15 Skin 0.03 protein_coding synonymous_variant LOW 405C>T Val135Val
M0017722 JIJAFICA_00010 11001 16 Skin 0.03 protein_coding synonymous_variant LOW 420C>T Ser140Ser
M0017723 JIJAFICA_00010 11036 15 Skin 0.03 protein_coding missense_variant MODERATE 455A>C Asn152Thr
M0017724 JIJAFICA_00010 11067 14 Skin 0.03 protein_coding synonymous_variant LOW 486A>G Ala162Ala
M0017725 JIJAFICA_00017 17122 6 Skin 0.01 protein_coding synonymous_variant LOW 927G>A Leu309Leu
M0017726 JIJAFICA_00017 17230 6 Skin 0.01 protein_coding synonymous_variant LOW 1035G>A Thr345Thr
M0017727 JIJAFICA_00017 17807 9 Skin 0.02 protein_coding missense_variant MODERATE 1612G>T Asp538Tyr
M0017728 JIJAFICA_00017 19969 18 Skin 0.04 protein_coding synonymous_variant LOW 3774T>C Asp1258Asp
M0017729 JIJAFICA_00019 20918 6 Skin 0.01 protein_coding synonymous_variant LOW 321T>C Asp107Asp
M0017730 JIJAFICA_00019 21314 9 Skin 0.02 protein_coding synonymous_variant LOW 717G>A Gly239Gly
M0017731 JIJAFICA_00019 21574 20 Skin 0.04 protein_coding missense_variant MODERATE 977A>G Gln326Arg
M0017732 JIJAFICA_00019 21961 18 Skin 0.04 protein_coding missense_variant MODERATE 1364A>G Gln455Arg
M0017733 JIJAFICA_00021 23867 10 Skin 0.02 protein_coding synonymous_variant LOW 1635G>A Gly545Gly
M0017734 JIJAFICA_00021 23871 15 Skin 0.03 protein_coding missense_variant MODERATE 1631G>A Ser544Asn
M0017735 JIJAFICA_00021 24968 6 Skin 0.01 protein_coding synonymous_variant LOW 534C>T Asp178Asp
M0017736 JIJAFICA_00021 25628 12 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -127T>C None
M0017737 JIJAFICA_00023 27283 11 Skin 0.02 protein_coding missense_variant MODERATE 1057T>G Leu353Val
M0017738 JIJAFICA_00003 1579 6 Skin 0.01 protein_coding missense_variant MODERATE 2800G>A Ala934Thr
M0017739 JIJAFICA_00009 10338 19 Skin 0.04 protein_coding missense_variant MODERATE 449G>T Gly150Val
M0017740 JIJAFICA_00001 257 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -55C>T None
M0017741 JIJAFICA_00003 3226 6 Skin 0.01 protein_coding missense_variant MODERATE 1153C>T Pro385Ser
M0017742 JIJAFICA_00003 4078 9 Skin 0.02 protein_coding missense_variant MODERATE 301C>T Leu101Phe
M0017743 JIJAFICA_00003 4286 16 Skin 0.03 protein_coding synonymous_variant LOW 93G>A Ser31Ser
M0017744 JIJAFICA_00003 4298 20 Skin 0.04 protein_coding synonymous_variant LOW 81A>G Arg27Arg
M0017745 JIJAFICA_00003 4331 18 Skin 0.04 protein_coding synonymous_variant LOW 48T>C Ala16Ala
M0017746 JIJAFICA_00004 4811 7 Skin 0.01 protein_coding missense_variant MODERATE 205G>A Ala69Thr
M0017747 JIJAFICA_00003 5380 19 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -1002G>A None
M0017748 JIJAFICA_00005 5466 7 Skin 0.01 protein_coding missense_variant MODERATE 71T>C Ile24Thr
M0017749 JIJAFICA_00005 5601 20 Skin 0.04 protein_coding missense_variant MODERATE 206T>C Val69Ala
M0017750 JIJAFICA_00009 10039 6 Skin 0.01 protein_coding synonymous_variant LOW 150C>T Asp50Asp
M0017751 JIJAFICA_00023 33051 12 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4712T>C None
M0017752 JIJAFICA_00024 33904 16 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3838C>A None
M0017753 JIJAFICA_00005 5506 5 Skin 0.01 protein_coding synonymous_variant LOW 111C>T Leu37Leu
M0017754 JIJAFICA_00003 4313 5 Skin 0.01 protein_coding synonymous_variant LOW 66C>G Ala22Ala
M0017755 JIJAFICA_00010 10923 13 Skin 0.03 protein_coding synonymous_variant LOW 342A>G Ala114Ala
M0017756 JIJAFICA_00012 12919 10 Skin 0.02 protein_coding synonymous_variant LOW 24T>G Gly8Gly
M0017757 JIJAFICA_00007 13098 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3749C>T None
M0017758 JIJAFICA_00002 1127 10 Skin 0.02 protein_coding synonymous_variant LOW 54G>A Leu18Leu
M0017759 JIJAFICA_00003 4527 16 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -149G>A None
M0017760 JIJAFICA_00003 9375 5 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -4997C>T None
M0017761 JIJAFICA_00015 14407 10 Skin 0.02 protein_coding synonymous_variant LOW 63C>T Ser21Ser
M0017762 JIJAFICA_00017 17537 6 Skin 0.01 protein_coding missense_variant MODERATE 1342A>G Ile448Val
M0017763 JIJAFICA_00017 17542 6 Skin 0.01 protein_coding synonymous_variant LOW 1347A>G Ala449Ala
M0017764 JIJAFICA_00021 25346 5 Skin 0.01 protein_coding synonymous_variant LOW 156T>C Ser52Ser
M0017765 JIJAFICA_00024 28459 5 Skin 0.01 protein_coding synonymous_variant LOW 1608A>T Thr536Thr
M0017766 JIJAFICA_00024 28488 5 Skin 0.01 protein_coding missense_variant MODERATE 1579A>G Ser527Gly
M0017767 JIJAFICA_00024 29797 7 Skin 0.01 protein_coding synonymous_variant LOW 270G>A Lys90Lys
M0017768 JIJAFICA_00024 29802 8 Skin 0.02 protein_coding missense_variant MODERATE 265G>C Ala89Pro
M0017769 JIJAFICA_00024 29830 9 Skin 0.02 protein_coding synonymous_variant LOW 237C>T His79His
M0017770 JIJAFICA_00025 30071 12 Skin 0.03 protein_coding stop_lost&splice_region_variant HIGH 778T>A Ter260Lysext*?
M0017771 JIJAFICA_00025 30099 12 Skin 0.03 protein_coding synonymous_variant LOW 750T>C Ala250Ala
M0017772 JIJAFICA_00025 30140 9 Skin 0.02 protein_coding missense_variant MODERATE 709G>A Ala237Thr
M0017773 JIJAFICA_00026 30857 12 Skin 0.03 protein_coding synonymous_variant LOW 1050G>A Lys350Lys
M0017774 JIJAFICA_00005 5570 7 Skin 0.01 protein_coding missense_variant MODERATE 175G>A Ala59Thr
M0017775 JIJAFICA_00005 5572 7 Skin 0.01 protein_coding synonymous_variant LOW 177C>T Ala59Ala
M0017776 JIJAFICA_00005 5587 7 Skin 0.01 protein_coding synonymous_variant LOW 192T>C Asp64Asp
M0017777 JIJAFICA_00005 5593 7 Skin 0.01 protein_coding synonymous_variant LOW 198C>T Val66Val
M0017778 JIJAFICA_00005 5638 5 Skin 0.01 protein_coding synonymous_variant LOW 243C>T Ala81Ala
M0017779 JIJAFICA_00005 5651 5 Skin 0.01 protein_coding missense_variant MODERATE 256G>A Val86Ile
M0017780 JIJAFICA_00005 5674 5 Skin 0.01 protein_coding synonymous_variant LOW 279G>A Pro93Pro
M0017781 JIJAFICA_00007 7871 11 Skin 0.02 protein_coding synonymous_variant LOW 1479C>A Ile493Ile
M0017782 JIJAFICA_00013 13338 5 Skin 0.01 protein_coding missense_variant MODERATE 80G>C Cys27Ser
M0017783 JIJAFICA_00015 14386 5 Skin 0.01 protein_coding synonymous_variant LOW 42G>A Thr14Thr
M0017784 JIJAFICA_00015 14410 5 Skin 0.01 protein_coding synonymous_variant LOW 66C>T His22His
M0017785 JIJAFICA_00015 14436 5 Skin 0.01 protein_coding missense_variant MODERATE 92T>C Val31Ala
M0017786 JIJAFICA_00015 14686 7 Skin 0.01 protein_coding synonymous_variant LOW 342C>T Ile114Ile
M0017787 JIJAFICA_00015 14698 7 Skin 0.01 protein_coding synonymous_variant LOW 354G>A Ser118Ser
M0017788 JIJAFICA_00015 14707 7 Skin 0.01 protein_coding synonymous_variant LOW 363G>A Gly121Gly
M0017789 JIJAFICA_00015 14732 7 Skin 0.01 protein_coding missense_variant MODERATE 388A>G Ile130Val
M0017790 JIJAFICA_00015 14740 7 Skin 0.01 protein_coding synonymous_variant LOW 396A>C Pro132Pro
M0017791 JIJAFICA_00015 14746 9 Skin 0.02 protein_coding synonymous_variant LOW 402A>G Arg134Arg
M0017792 JIJAFICA_00015 14998 5 Skin 0.01 protein_coding synonymous_variant LOW 654T>C Tyr218Tyr
M0017793 JIJAFICA_00015 15040 5 Skin 0.01 protein_coding synonymous_variant LOW 696A>G Arg232Arg
M0017794 JIJAFICA_00015 15061 5 Skin 0.01 protein_coding synonymous_variant LOW 717T>C Gly239Gly
M0017795 JIJAFICA_00015 15223 7 Skin 0.01 protein_coding synonymous_variant LOW 879C>A Arg293Arg
M0017796 JIJAFICA_00015 15268 9 Skin 0.02 protein_coding synonymous_variant LOW 924A>G Leu308Leu
M0017797 JIJAFICA_00016 15968 6 Skin 0.01 protein_coding synonymous_variant LOW 567G>A Gln189Gln
M0017798 JIJAFICA_00017 16370 6 Skin 0.01 protein_coding missense_variant MODERATE 175G>C Val59Leu
M0017799 JIJAFICA_00017 16577 5 Skin 0.01 protein_coding missense_variant MODERATE 382T>A Ser128Thr
M0017800 JIJAFICA_00017 17827 5 Skin 0.01 protein_coding synonymous_variant LOW 1632A>G Pro544Pro
M0017801 JIJAFICA_00024 29872 6 Skin 0.01 protein_coding synonymous_variant LOW 195G>T Ala65Ala
M0017802 JIJAFICA_00024 29903 9 Skin 0.02 protein_coding missense_variant MODERATE 164A>G Tyr55Cys
M0017803 JIJAFICA_00024 29912 9 Skin 0.02 protein_coding missense_variant MODERATE 155C>T Pro52Leu
M0017804 JIJAFICA_00003 4121 16 Skin 0.03 protein_coding synonymous_variant LOW 258C>T Leu86Leu
M0017805 JIJAFICA_00003 4169 15 Skin 0.03 protein_coding synonymous_variant LOW 210C>G Arg70Arg
M0017806 JIJAFICA_00003 4184 15 Skin 0.03 protein_coding synonymous_variant LOW 195G>A Thr65Thr
M0017807 JIJAFICA_00003 4202 14 Skin 0.03 protein_coding synonymous_variant LOW 177C>T Ser59Ser
M0017808 JIJAFICA_00009 10121 16 Skin 0.03 protein_coding synonymous_variant LOW 232T>C Leu78Leu
M0017809 JIJAFICA_00009 10135 16 Skin 0.03 protein_coding synonymous_variant LOW 246G>A Glu82Glu
M0017810 JIJAFICA_00006 10437 15 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3387T>C None
M0017811 JIJAFICA_00006 10476 12 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3426C>T None
M0017812 JIJAFICA_00006 10518 13 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3468A>G None
M0017813 JIJAFICA_00006 10569 14 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3519T>C None
M0017814 JIJAFICA_00010 10651 14 Skin 0.03 protein_coding missense_variant MODERATE 70G>A Val24Ile
M0017815 JIJAFICA_00010 11350 9 Skin 0.02 protein_coding missense_variant MODERATE 769A>G Met257Val
M0017816 JIJAFICA_00006 11425 9 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4375T>C None
M0017817 JIJAFICA_00006 11452 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4402A>G None
M0017818 JIJAFICA_00006 11458 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4408C>T None
M0017819 JIJAFICA_00023 27725 5 Skin 0.01 protein_coding synonymous_variant LOW 615G>C Thr205Thr
M0017820 JIJAFICA_00023 27730 5 Skin 0.01 protein_coding missense_variant MODERATE 610T>A Phe204Ile
M0017821 JIJAFICA_00024 29429 5 Skin 0.01 protein_coding missense_variant MODERATE 638A>G Gln213Arg
M0017822 JIJAFICA_00024 29494 8 Skin 0.02 protein_coding synonymous_variant LOW 573C>T Arg191Arg
M0017823 JIJAFICA_00024 29510 8 Skin 0.02 protein_coding missense_variant MODERATE 557G>A Arg186His
M0017824 JIJAFICA_00025 30397 8 Skin 0.02 protein_coding missense_variant MODERATE 452C>A Ala151Glu
M0017825 JIJAFICA_00025 30450 10 Skin 0.02 protein_coding synonymous_variant LOW 399G>A Leu133Leu
M0017826 JIJAFICA_00025 30478 10 Skin 0.02 protein_coding missense_variant MODERATE 371A>G Asp124Gly
M0017827 JIJAFICA_00025 30741 12 Skin 0.03 protein_coding synonymous_variant LOW 108C>T Asn36Asn
M0017828 JIJAFICA_00026 31118 9 Skin 0.02 protein_coding synonymous_variant LOW 789A>T Leu263Leu
M0017829 JIJAFICA_00026 31193 7 Skin 0.01 protein_coding synonymous_variant LOW 714T>C Gly238Gly
M0017830 JIJAFICA_00026 31718 10 Skin 0.02 protein_coding synonymous_variant LOW 189C>T Asp63Asp
M0017831 JIJAFICA_00026 31759 10 Skin 0.02 protein_coding missense_variant MODERATE 148G>A Ala50Thr
M0017832 JIJAFICA_00026 31811 12 Skin 0.03 protein_coding synonymous_variant LOW 96A>G Val32Val
M0017833 JIJAFICA_00027 32150 10 Skin 0.02 protein_coding missense_variant MODERATE 857C>A Thr286Lys
M0017834 JIJAFICA_00027 32204 7 Skin 0.01 protein_coding missense_variant MODERATE 803G>A Ser268Asn
M0017835 JIJAFICA_00027 32380 9 Skin 0.02 protein_coding missense_variant MODERATE 627T>G Asp209Glu
M0017836 JIJAFICA_00027 32752 9 Skin 0.02 protein_coding synonymous_variant LOW 255A>G Lys85Lys
M0017837 JIJAFICA_00028 33175 9 Skin 0.02 protein_coding missense_variant MODERATE 682G>A Val228Met
M0017838 JIJAFICA_00028 33203 10 Skin 0.02 protein_coding synonymous_variant LOW 654C>T Gly218Gly
M0017839 JIJAFICA_00028 33413 15 Skin 0.03 protein_coding synonymous_variant LOW 444G>T Gly148Gly
M0017840 JIJAFICA_00028 33554 10 Skin 0.02 protein_coding synonymous_variant LOW 303G>T Gly101Gly
M0017841 JIJAFICA_00028 33659 12 Skin 0.03 protein_coding synonymous_variant LOW 198A>G Lys66Lys
M0017842 JIJAFICA_00028 33668 12 Skin 0.03 protein_coding synonymous_variant LOW 189T>C Pro63Pro
M0017843 JIJAFICA_00028 33766 5 Skin 0.01 protein_coding missense_variant MODERATE 91C>A Arg31Ser
M0017844 JIJAFICA_00024 33894 10 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3828C>T None
M0017845 JIJAFICA_00017 18544 10 Skin 0.02 protein_coding synonymous_variant LOW 2349G>A Gln783Gln
M0017846 JIJAFICA_00017 18587 12 Skin 0.03 protein_coding missense_variant MODERATE 2392T>C Ser798Pro
M0017847 JIJAFICA_00019 21617 8 Skin 0.02 protein_coding synonymous_variant LOW 1020A>T Ser340Ser
M0017848 JIJAFICA_00019 21656 7 Skin 0.01 protein_coding synonymous_variant LOW 1059T>G Thr353Thr
M0017849 JIJAFICA_00019 21658 9 Skin 0.02 protein_coding missense_variant MODERATE 1061G>C Arg354Thr
M0017850 JIJAFICA_00024 29049 6 Skin 0.01 protein_coding missense_variant MODERATE 1018C>T Pro340Ser
M0017851 JIJAFICA_00024 29076 7 Skin 0.01 protein_coding missense_variant MODERATE 991C>T Pro331Ser
M0017852 JIJAFICA_00024 29084 7 Skin 0.01 protein_coding missense_variant MODERATE 983C>T Thr328Met
M0017853 JIJAFICA_00024 29140 7 Skin 0.01 protein_coding synonymous_variant LOW 927A>G Arg309Arg
M0017854 JIJAFICA_00024 29146 7 Skin 0.01 protein_coding synonymous_variant LOW 921A>G Ala307Ala
M0017855 JIJAFICA_00024 29155 7 Skin 0.01 protein_coding synonymous_variant LOW 912T>C Ser304Ser
M0017856 JIJAFICA_00024 29173 7 Skin 0.01 protein_coding synonymous_variant LOW 894T>C Gly298Gly
M0017857 JIJAFICA_00024 29604 7 Skin 0.01 protein_coding missense_variant MODERATE 463T>C Phe155Leu
M0017858 JIJAFICA_00024 29626 6 Skin 0.01 protein_coding synonymous_variant LOW 441C>T Val147Val
M0017859 JIJAFICA_00024 29708 9 Skin 0.02 protein_coding missense_variant MODERATE 359T>C Val120Ala
M0017860 JIJAFICA_00024 29725 8 Skin 0.02 protein_coding synonymous_variant LOW 342C>T Thr114Thr
M0017861 JIJAFICA_00025 30750 6 Skin 0.01 protein_coding synonymous_variant LOW 99G>A Leu33Leu
M0017862 JIJAFICA_00026 31715 5 Skin 0.01 protein_coding synonymous_variant LOW 192C>T Ala64Ala
M0017863 JIJAFICA_00003 4142 15 Skin 0.03 protein_coding synonymous_variant LOW 237T>C Ile79Ile
M0017864 JIJAFICA_00015 14792 7 Skin 0.01 protein_coding missense_variant MODERATE 448G>A Ala150Thr
M0017865 JIJAFICA_00023 33086 5 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -4747C>T None
M0017866 JIJAFICA_00023 27515 6 Skin 0.01 protein_coding synonymous_variant LOW 825C>T Ile275Ile
M0017867 JIJAFICA_00023 27517 6 Skin 0.01 protein_coding missense_variant MODERATE 823A>G Ile275Val
M0017868 JIJAFICA_00022 26431 8 Skin 0.02 protein_coding synonymous_variant LOW 210A>G Gln70Gln
M0017869 JIJAFICA_00022 26446 8 Skin 0.02 protein_coding synonymous_variant LOW 195C>T Val65Val
M0017870 JIJAFICA_00017 18721 11 Skin 0.02 protein_coding missense_variant MODERATE 2526A>G Ile842Met
M0017871 JIJAFICA_00022 26567 10 Skin 0.02 protein_coding missense_variant MODERATE 74A>G Asp25Gly
M0017872 JIJAFICA_00022 26575 6 Skin 0.01 protein_coding synonymous_variant LOW 66C>A Ala22Ala
M0017873 JIJAFICA_00022 26585 6 Skin 0.01 protein_coding missense_variant MODERATE 56G>A Gly19Asp
M0017874 JIJAFICA_00022 26608 6 Skin 0.01 protein_coding synonymous_variant LOW 33G>A Thr11Thr
M0017875 JIJAFICA_00022 26625 6 Skin 0.01 protein_coding missense_variant MODERATE 16G>A Val6Ile
M0017876 JIJAFICA_00022 26640 10 Skin 0.02 protein_coding start_lost HIGH 1A>G Met1?
M0017877 JIJAFICA_00023 26672 10 Skin 0.02 protein_coding synonymous_variant LOW 1668G>A Arg556Arg
M0017878 JIJAFICA_00006 10515 5 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3465C>G None
M0017879 JIJAFICA_00013 13241 5 Skin 0.01 protein_coding synonymous_variant LOW 177C>T Asn59Asn
M0017880 JIJAFICA_00013 13273 5 Skin 0.01 protein_coding missense_variant MODERATE 145G>A Gly49Ser
M0017881 JIJAFICA_00017 18448 10 Skin 0.02 protein_coding synonymous_variant LOW 2253T>C Ala751Ala
M0017882 JIJAFICA_00017 19474 10 Skin 0.02 protein_coding synonymous_variant LOW 3279A>G Lys1093Lys
M0017883 JIJAFICA_00018 20292 6 Skin 0.01 protein_coding synonymous_variant LOW 228C>T Phe76Phe
M0017884 JIJAFICA_00018 20521 7 Skin 0.01 protein_coding missense_variant MODERATE 457A>G Ser153Gly
M0017885 JIJAFICA_00019 20767 8 Skin 0.02 protein_coding missense_variant MODERATE 170T>C Val57Ala
M0017886 JIJAFICA_00019 21020 10 Skin 0.02 protein_coding synonymous_variant LOW 423C>T Arg141Arg
M0017887 JIJAFICA_00019 21122 8 Skin 0.02 protein_coding synonymous_variant LOW 525T>C Ile175Ile
M0017888 JIJAFICA_00019 21151 7 Skin 0.01 protein_coding missense_variant MODERATE 554T>C Val185Ala
M0017889 JIJAFICA_00019 21227 9 Skin 0.02 protein_coding synonymous_variant LOW 630A>G Thr210Thr
M0017890 JIJAFICA_00019 21274 7 Skin 0.01 protein_coding missense_variant MODERATE 677G>T Gly226Val
M0017891 JIJAFICA_00019 21851 6 Skin 0.01 protein_coding synonymous_variant LOW 1254T>C Gly418Gly
M0017892 JIJAFICA_00019 22265 10 Skin 0.02 protein_coding synonymous_variant LOW 1668C>T Val556Val
M0017893 JIJAFICA_00020 22461 8 Skin 0.02 protein_coding synonymous_variant LOW 60T>C Ser20Ser
M0017894 JIJAFICA_00020 22653 7 Skin 0.01 protein_coding synonymous_variant LOW 252G>A Thr84Thr
M0017895 JIJAFICA_00020 23300 7 Skin 0.01 protein_coding missense_variant MODERATE 899A>C Asp300Ala
M0017896 JIJAFICA_00017 23535 6 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *3506G>T None
M0017897 JIJAFICA_00017 23644 9 Skin 0.02 protein_coding downstream_gene_variant MODIFIER *3615C>G None
M0017898 JIJAFICA_00021 24602 6 Skin 0.01 protein_coding synonymous_variant LOW 900A>G Pro300Pro
M0017899 JIJAFICA_00021 25170 7 Skin 0.01 protein_coding missense_variant MODERATE 332C>T Ala111Val
M0017900 JIJAFICA_00021 25275 9 Skin 0.02 protein_coding missense_variant MODERATE 227T>C Leu76Ser
M0017901 JIJAFICA_00021 25769 5 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -268C>T None
M0017902 JIJAFICA_00021 25810 5 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -309G>A None
M0017903 JIJAFICA_00021 25847 5 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -346A>G None
M0017904 JIJAFICA_00022 26003 6 Skin 0.01 protein_coding missense_variant MODERATE 638C>A Ala213Glu
M0017905 JIJAFICA_00023 27634 5 Skin 0.01 protein_coding missense_variant MODERATE 706A>G Thr236Ala
M0017906 JIJAFICA_00022 26040 6 Skin 0.01 protein_coding missense_variant MODERATE 601G>A Val201Ile
M0017907 JIJAFICA_00022 26053 6 Skin 0.01 protein_coding synonymous_variant LOW 588A>G Ala196Ala
M0017908 JIJAFICA_00022 26062 6 Skin 0.01 protein_coding synonymous_variant LOW 579A>G Glu193Glu
M0017909 JIJAFICA_00022 26098 6 Skin 0.01 protein_coding synonymous_variant LOW 543A>G Ala181Ala
M0017910 JIJAFICA_00022 26275 5 Skin 0.01 protein_coding synonymous_variant LOW 366T>C His122His
M0017911 JIJAFICA_00022 26365 7 Skin 0.01 protein_coding synonymous_variant LOW 276G>A Arg92Arg
M0017912 JIJAFICA_00023 26774 5 Skin 0.01 protein_coding synonymous_variant LOW 1566A>G Arg522Arg
M0017913 JIJAFICA_00023 26816 6 Skin 0.01 protein_coding synonymous_variant LOW 1524G>A Val508Val
M0017914 JIJAFICA_00023 28220 5 Skin 0.01 protein_coding synonymous_variant LOW 120T>C Gly40Gly
M0017915 JIJAFICA_00024 28397 5 Skin 0.01 protein_coding missense_variant MODERATE 1670T>C Leu557Ser
M0017916 JIJAFICA_00024 28618 5 Skin 0.01 protein_coding synonymous_variant LOW 1449T>C Gly483Gly






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term