Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2080
  Reference Plasmid   1111525849739531_bin.11__k141_34720
  Reference Plasmid Size   31145
  Reference Plasmid GC Content   0.65
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0024078 MGAINPCE_00023 22265 67 Skin 0.60 protein_coding missense_variant MODERATE 484C>T His162Tyr
M0024079 MGAINPCE_00026 24652 6 Skin 0.05 protein_coding missense_variant MODERATE 1688A>G Asp563Gly
M0024080 MGAINPCE_00021 20239 31 Skin 0.28 protein_coding synonymous_variant LOW 273C>T Tyr91Tyr
M0024081 MGAINPCE_00022 20603 52 Skin 0.47 protein_coding synonymous_variant LOW 354C>G Pro118Pro
M0024082 MGAINPCE_00022 20627 53 Skin 0.48 protein_coding synonymous_variant LOW 330A>G Val110Val
M0024083 MGAINPCE_00022 20688 15 Skin 0.14 protein_coding missense_variant MODERATE 269A>G Asn90Ser
M0024084 MGAINPCE_00022 20786 20 Skin 0.18 protein_coding synonymous_variant LOW 171G>A Lys57Lys
M0024085 MGAINPCE_00022 20798 20 Skin 0.18 protein_coding synonymous_variant LOW 159G>A Gln53Gln
M0024086 MGAINPCE_00022 20839 17 Skin 0.15 protein_coding missense_variant MODERATE 118G>A Ala40Thr
M0024087 MGAINPCE_00022 20843 17 Skin 0.15 protein_coding synonymous_variant LOW 114G>A Thr38Thr
M0024088 MGAINPCE_00003 4183 19 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -220T>C None
M0024089 MGAINPCE_00003 5758 14 Skin 0.13 protein_coding synonymous_variant LOW 1356G>A Val452Val
M0024090 MGAINPCE_00004 6388 5 Skin 0.05 protein_coding synonymous_variant LOW 564C>T Gly188Gly
M0024091 MGAINPCE_00004 6410 5 Skin 0.05 protein_coding synonymous_variant LOW 586C>T Leu196Leu
M0024092 MGAINPCE_00005 7545 3 Skin 0.03 protein_coding synonymous_variant LOW 819G>A Leu273Leu
M0024093 MGAINPCE_00006 7838 5 Skin 0.05 protein_coding synonymous_variant LOW 168C>T Ile56Ile
M0024094 MGAINPCE_00006 7871 5 Skin 0.05 protein_coding synonymous_variant LOW 201G>A Gly67Gly
M0024095 MGAINPCE_00006 7872 5 Skin 0.05 protein_coding synonymous_variant LOW 202C>T Leu68Leu
M0024096 MGAINPCE_00007 8446 4 Skin 0.04 protein_coding synonymous_variant LOW 21C>T Ile7Ile
M0024097 MGAINPCE_00001 2352 13 Skin 0.12 protein_coding synonymous_variant LOW 1998T>C Ser666Ser
M0024098 MGAINPCE_00002 2796 10 Skin 0.09 protein_coding missense_variant MODERATE 145C>A Leu49Met
M0024099 MGAINPCE_00002 3692 4 Skin 0.04 protein_coding synonymous_variant LOW 1041A>T Leu347Leu
M0024100 MGAINPCE_00003 4277 9 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -126T>C None
M0024101 MGAINPCE_00004 6494 12 Skin 0.11 protein_coding missense_variant MODERATE 670G>A Val224Ile
M0024102 MGAINPCE_00007 8575 5 Skin 0.05 protein_coding synonymous_variant LOW 150C>A Ser50Ser
M0024103 MGAINPCE_00001 2259 4 Skin 0.04 protein_coding synonymous_variant LOW 1905T>G Gly635Gly
M0024104 MGAINPCE_00001 2469 6 Skin 0.05 protein_coding synonymous_variant LOW 2115A>G Lys705Lys
M0024105 MGAINPCE_00001 2472 6 Skin 0.05 protein_coding synonymous_variant LOW 2118G>T Ser706Ser
M0024106 MGAINPCE_00002 2537 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -115G>A None
M0024107 MGAINPCE_00002 2616 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -36G>A None
M0024108 MGAINPCE_00002 3354 6 Skin 0.05 protein_coding missense_variant MODERATE 703G>A Val235Ile
M0024109 MGAINPCE_00002 3767 4 Skin 0.04 protein_coding synonymous_variant LOW 1116A>C Pro372Pro
M0024110 MGAINPCE_00002 3833 7 Skin 0.06 protein_coding synonymous_variant LOW 1182A>G Pro394Pro
M0024111 MGAINPCE_00002 3835 7 Skin 0.06 protein_coding missense_variant MODERATE 1184C>A Thr395Asn
M0024112 MGAINPCE_00005 7359 5 Skin 0.05 protein_coding missense_variant MODERATE 633G>T Glu211Asp
M0024113 MGAINPCE_00006 8285 4 Skin 0.04 protein_coding synonymous_variant LOW 615G>C Leu205Leu
M0024114 MGAINPCE_00007 8890 6 Skin 0.05 protein_coding synonymous_variant LOW 465T>C Asp155Asp
M0024115 MGAINPCE_00007 9211 7 Skin 0.06 protein_coding synonymous_variant LOW 786G>C Pro262Pro
M0024116 MGAINPCE_00018 18356 32 Skin 0.29 protein_coding synonymous_variant LOW 186A>T Val62Val
M0024117 MGAINPCE_00018 18380 31 Skin 0.28 protein_coding synonymous_variant LOW 162G>C Val54Val
M0024118 MGAINPCE_00019 18658 12 Skin 0.11 protein_coding synonymous_variant LOW 309G>A Glu103Glu
M0024119 MGAINPCE_00019 18772 32 Skin 0.29 protein_coding synonymous_variant LOW 195T>C Arg65Arg
M0024120 MGAINPCE_00015 19066 41 Skin 0.37 protein_coding upstream_gene_variant MODIFIER -3285T>C None
M0024121 MGAINPCE_00020 19139 21 Skin 0.19 protein_coding synonymous_variant LOW 60C>T Ser20Ser
M0024122 MGAINPCE_00020 19145 21 Skin 0.19 protein_coding synonymous_variant LOW 66G>A Ala22Ala
M0024123 MGAINPCE_00020 19157 21 Skin 0.19 protein_coding synonymous_variant LOW 78C>T Ser26Ser
M0024124 MGAINPCE_00021 20280 28 Skin 0.25 protein_coding missense_variant MODERATE 232A>G Met78Val
M0024125 MGAINPCE_00021 20294 28 Skin 0.25 protein_coding missense_variant MODERATE 218T>C Val73Ala
M0024126 MGAINPCE_00021 20300 28 Skin 0.25 protein_coding missense_variant MODERATE 212T>C Met71Thr
M0024127 MGAINPCE_00021 20308 28 Skin 0.25 protein_coding synonymous_variant LOW 204A>G Val68Val
M0024128 MGAINPCE_00021 20309 28 Skin 0.25 protein_coding missense_variant MODERATE 203T>C Val68Ala
M0024129 MGAINPCE_00021 20329 26 Skin 0.23 protein_coding synonymous_variant LOW 183C>T Leu61Leu
M0024130 MGAINPCE_00021 20333 28 Skin 0.25 protein_coding missense_variant MODERATE 179G>T Gly60Val
M0024131 MGAINPCE_00021 20341 28 Skin 0.25 protein_coding synonymous_variant LOW 171C>T Asp57Asp
M0024132 MGAINPCE_00021 20365 28 Skin 0.25 protein_coding synonymous_variant LOW 147A>G Leu49Leu
M0024133 MGAINPCE_00015 14657 5 Skin 0.05 protein_coding synonymous_variant LOW 1125G>C Val375Val
M0024134 MGAINPCE_00015 14693 5 Skin 0.05 protein_coding synonymous_variant LOW 1089A>G Glu363Glu
M0024135 MGAINPCE_00015 15413 6 Skin 0.05 protein_coding synonymous_variant LOW 369T>C Ile123Ile
M0024136 MGAINPCE_00015 15536 4 Skin 0.04 protein_coding synonymous_variant LOW 246A>G Val82Val
M0024137 MGAINPCE_00015 15712 8 Skin 0.07 protein_coding missense_variant MODERATE 70G>A Ala24Thr
M0024138 MGAINPCE_00016 16353 10 Skin 0.09 protein_coding synonymous_variant LOW 537A>G Pro179Pro
M0024139 MGAINPCE_00016 16374 10 Skin 0.09 protein_coding synonymous_variant LOW 516C>T Ala172Ala
M0024140 MGAINPCE_00016 16473 12 Skin 0.11 protein_coding synonymous_variant LOW 417G>A Val139Val
M0024141 MGAINPCE_00016 16479 12 Skin 0.11 protein_coding synonymous_variant LOW 411C>G Leu137Leu
M0024142 MGAINPCE_00016 16482 12 Skin 0.11 protein_coding synonymous_variant LOW 408T>C Arg136Arg
M0024143 MGAINPCE_00016 16496 12 Skin 0.11 protein_coding missense_variant MODERATE 394C>G Gln132Glu
M0024144 MGAINPCE_00016 16503 11 Skin 0.10 protein_coding synonymous_variant LOW 387C>T Arg129Arg
M0024145 MGAINPCE_00016 16848 9 Skin 0.08 protein_coding synonymous_variant LOW 42G>C Arg14Arg
M0024146 MGAINPCE_00016 16877 7 Skin 0.06 protein_coding missense_variant MODERATE 13A>G Thr5Ala
M0024147 MGAINPCE_00017 17430 24 Skin 0.22 protein_coding missense_variant MODERATE 390G>C Glu130Asp
M0024148 MGAINPCE_00017 17619 18 Skin 0.16 protein_coding synonymous_variant LOW 579G>A Leu193Leu
M0024149 MGAINPCE_00017 17627 19 Skin 0.17 protein_coding missense_variant MODERATE 587T>A Leu196His
M0024150 MGAINPCE_00017 17655 18 Skin 0.16 protein_coding synonymous_variant LOW 615G>A Val205Val
M0024151 MGAINPCE_00017 17898 19 Skin 0.17 protein_coding synonymous_variant LOW 858C>G Leu286Leu
M0024152 MGAINPCE_00017 17899 19 Skin 0.17 protein_coding synonymous_variant LOW 859A>C Arg287Arg
M0024153 MGAINPCE_00019 18895 19 Skin 0.17 protein_coding synonymous_variant LOW 72C>T Arg24Arg
M0024154 MGAINPCE_00015 19995 23 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4214C>A None
M0024155 MGAINPCE_00015 20008 22 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -4227G>C None
M0024156 MGAINPCE_00015 20022 20 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4241G>A None
M0024157 MGAINPCE_00014 14167 4 Skin 0.04 protein_coding missense_variant MODERATE 592A>G Ser198Gly
M0024158 MGAINPCE_00014 14202 4 Skin 0.04 protein_coding synonymous_variant LOW 627A>G Leu209Leu
M0024159 MGAINPCE_00014 14214 4 Skin 0.04 protein_coding synonymous_variant LOW 639G>C Thr213Thr
M0024160 MGAINPCE_00014 14244 3 Skin 0.03 protein_coding synonymous_variant LOW 669A>G Ala223Ala
M0024161 MGAINPCE_00014 14251 3 Skin 0.03 protein_coding missense_variant MODERATE 676C>G His226Asp
M0024162 MGAINPCE_00014 14259 3 Skin 0.03 protein_coding synonymous_variant LOW 684C>T Leu228Leu
M0024163 MGAINPCE_00014 14263 3 Skin 0.03 protein_coding missense_variant MODERATE 688G>A Gly230Ser
M0024164 MGAINPCE_00014 14265 3 Skin 0.03 protein_coding synonymous_variant LOW 690C>G Gly230Gly
M0024165 MGAINPCE_00014 14274 3 Skin 0.03 protein_coding synonymous_variant LOW 699C>T Asp233Asp
M0024166 MGAINPCE_00014 14278 3 Skin 0.03 protein_coding synonymous_variant LOW 703T>C Leu235Leu
M0024167 MGAINPCE_00014 14289 3 Skin 0.03 protein_coding synonymous_variant LOW 714A>G Gln238Gln
M0024168 MGAINPCE_00014 14292 3 Skin 0.03 protein_coding synonymous_variant LOW 717C>G Ala239Ala
M0024169 MGAINPCE_00014 14307 3 Skin 0.03 protein_coding synonymous_variant LOW 732T>A Gly244Gly
M0024170 MGAINPCE_00014 14317 3 Skin 0.03 protein_coding missense_variant MODERATE 742G>A Asp248Asn
M0024171 MGAINPCE_00014 14322 3 Skin 0.03 protein_coding synonymous_variant LOW 747T>C Tyr249Tyr
M0024172 MGAINPCE_00014 14331 3 Skin 0.03 protein_coding synonymous_variant LOW 756G>A Glu252Glu
M0024173 MGAINPCE_00015 16999 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1218G>C None
M0024174 MGAINPCE_00015 17006 12 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -1225C>T None
M0024175 MGAINPCE_00015 17024 12 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -1243G>A None
M0024176 MGAINPCE_00017 17061 10 Skin 0.09 protein_coding synonymous_variant LOW 21C>T Ser7Ser
M0024177 MGAINPCE_00017 17076 9 Skin 0.08 protein_coding synonymous_variant LOW 36C>T Phe12Phe
M0024178 MGAINPCE_00017 17109 9 Skin 0.08 protein_coding synonymous_variant LOW 69T>G Ala23Ala
M0024179 MGAINPCE_00017 17265 11 Skin 0.10 protein_coding synonymous_variant LOW 225A>G Leu75Leu
M0024180 MGAINPCE_00017 17277 11 Skin 0.10 protein_coding synonymous_variant LOW 237C>T His79His
M0024181 MGAINPCE_00017 17280 11 Skin 0.10 protein_coding synonymous_variant LOW 240C>T Ala80Ala
M0024182 MGAINPCE_00017 17523 14 Skin 0.13 protein_coding synonymous_variant LOW 483A>C Gly161Gly
M0024183 MGAINPCE_00017 17526 15 Skin 0.14 protein_coding synonymous_variant LOW 486A>G Pro162Pro
M0024184 MGAINPCE_00017 17583 15 Skin 0.14 protein_coding synonymous_variant LOW 543G>A Thr181Thr
M0024185 MGAINPCE_00018 18005 15 Skin 0.14 protein_coding synonymous_variant LOW 537A>G Ala179Ala
M0024186 MGAINPCE_00018 18023 14 Skin 0.13 protein_coding synonymous_variant LOW 519C>A Gly173Gly
M0024187 MGAINPCE_00018 18215 12 Skin 0.11 protein_coding synonymous_variant LOW 327C>T Ala109Ala
M0024188 MGAINPCE_00018 18220 12 Skin 0.11 protein_coding missense_variant MODERATE 322T>A Cys108Ser
M0024189 MGAINPCE_00018 18442 15 Skin 0.14 protein_coding missense_variant MODERATE 100A>G Thr34Ala
M0024190 MGAINPCE_00018 18446 15 Skin 0.14 protein_coding synonymous_variant LOW 96C>T Asp32Asp
M0024191 MGAINPCE_00018 18461 15 Skin 0.14 protein_coding synonymous_variant LOW 81G>A Glu27Glu
M0024192 MGAINPCE_00018 18523 11 Skin 0.10 protein_coding missense_variant MODERATE 19C>G Gln7Glu
M0024193 MGAINPCE_00020 19618 27 Skin 0.24 protein_coding missense_variant MODERATE 539C>T Thr180Ile
M0024194 MGAINPCE_00020 19637 27 Skin 0.24 protein_coding missense_variant MODERATE 558G>T Glu186Asp
M0024195 MGAINPCE_00020 19652 27 Skin 0.24 protein_coding synonymous_variant LOW 573T>C Leu191Leu
M0024196 MGAINPCE_00020 19654 26 Skin 0.23 protein_coding missense_variant MODERATE 575T>G Phe192Cys
M0024197 MGAINPCE_00020 19841 23 Skin 0.21 protein_coding synonymous_variant LOW 762G>A Leu254Leu
M0024198 MGAINPCE_00020 19860 23 Skin 0.21 protein_coding missense_variant MODERATE 781A>G Lys261Glu
M0024199 MGAINPCE_00020 19901 20 Skin 0.18 protein_coding synonymous_variant LOW 822A>G Gln274Gln
M0024200 MGAINPCE_00022 20906 13 Skin 0.12 protein_coding synonymous_variant LOW 51G>A Ala17Ala
M0024201 MGAINPCE_00022 20919 13 Skin 0.12 protein_coding missense_variant MODERATE 38A>T Glu13Val
M0024202 MGAINPCE_00016 20979 9 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4090T>G None
M0024203 MGAINPCE_00016 21046 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4157C>T None
M0024204 MGAINPCE_00016 21052 6 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4163T>G None
M0024205 MGAINPCE_00023 22647 3 Skin 0.03 protein_coding synonymous_variant LOW 102T>C Phe34Phe
M0024206 MGAINPCE_00023 22656 3 Skin 0.03 protein_coding synonymous_variant LOW 93T>C Ala31Ala
M0024207 MGAINPCE_00029 29855 13 Skin 0.12 protein_coding missense_variant MODERATE 333G>C Arg111Ser
M0024208 MGAINPCE_00029 29866 10 Skin 0.09 protein_coding missense_variant MODERATE 322T>C Ser108Pro
M0024209 MGAINPCE_00017 17808 13 Skin 0.12 protein_coding synonymous_variant LOW 768G>A Gly256Gly
M0024210 MGAINPCE_00020 19373 11 Skin 0.10 protein_coding synonymous_variant LOW 294T>C Ala98Ala
M0024211 MGAINPCE_00020 19544 20 Skin 0.18 protein_coding synonymous_variant LOW 465G>A Ala155Ala
M0024212 MGAINPCE_00020 19558 22 Skin 0.20 protein_coding missense_variant MODERATE 479G>C Ser160Thr
M0024213 MGAINPCE_00020 19751 24 Skin 0.22 protein_coding synonymous_variant LOW 672G>C Ala224Ala
M0024214 MGAINPCE_00020 19757 24 Skin 0.22 protein_coding synonymous_variant LOW 678T>C Leu226Leu
M0024215 MGAINPCE_00020 19775 20 Skin 0.18 protein_coding synonymous_variant LOW 696G>A Leu232Leu
M0024216 MGAINPCE_00023 22533 3 Skin 0.03 protein_coding synonymous_variant LOW 216C>G Ala72Ala
M0024217 MGAINPCE_00030 30617 17 Skin 0.15 protein_coding synonymous_variant LOW 360C>T Asn120Asn
M0024218 MGAINPCE_00030 30685 13 Skin 0.12 protein_coding missense_variant MODERATE 292G>A Ala98Thr
M0024219 MGAINPCE_00026 30301 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3962T>C None
M0024220 MGAINPCE_00026 30317 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3978T>G None
M0024221 MGAINPCE_00026 24759 4 Skin 0.04 protein_coding synonymous_variant LOW 1581A>G Val527Val
M0024222 MGAINPCE_00026 30346 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4007C>G None
M0024223 MGAINPCE_00026 30350 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4011T>A None
M0024224 MGAINPCE_00026 30488 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4149A>G None
M0024225 MGAINPCE_00001 52 7 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -303A>C None
M0024226 MGAINPCE_00001 133 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -222A>G None
M0024227 MGAINPCE_00001 144 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -211C>T None
M0024228 MGAINPCE_00001 672 10 Skin 0.09 protein_coding synonymous_variant LOW 318C>T Arg106Arg
M0024229 MGAINPCE_00001 684 10 Skin 0.09 protein_coding synonymous_variant LOW 330C>A Ala110Ala
M0024230 MGAINPCE_00001 693 10 Skin 0.09 protein_coding synonymous_variant LOW 339A>G Gly113Gly
M0024231 MGAINPCE_00001 696 10 Skin 0.09 protein_coding synonymous_variant LOW 342G>A Lys114Lys
M0024232 MGAINPCE_00001 762 9 Skin 0.08 protein_coding synonymous_variant LOW 408T>C Phe136Phe
M0024233 MGAINPCE_00001 768 9 Skin 0.08 protein_coding synonymous_variant LOW 414G>A Lys138Lys
M0024234 MGAINPCE_00001 969 12 Skin 0.11 protein_coding synonymous_variant LOW 615C>T Gly205Gly
M0024235 MGAINPCE_00001 1401 7 Skin 0.06 protein_coding synonymous_variant LOW 1047T>C His349His
M0024236 MGAINPCE_00001 1491 4 Skin 0.04 protein_coding synonymous_variant LOW 1137C>T Thr379Thr
M0024237 MGAINPCE_00001 1515 4 Skin 0.04 protein_coding synonymous_variant LOW 1161C>T Arg387Arg
M0024238 MGAINPCE_00001 1545 5 Skin 0.05 protein_coding synonymous_variant LOW 1191C>G Pro397Pro
M0024239 MGAINPCE_00001 1548 5 Skin 0.05 protein_coding missense_variant MODERATE 1194C>A Asp398Glu
M0024240 MGAINPCE_00001 1570 13 Skin 0.12 protein_coding missense_variant MODERATE 1216G>T Ala406Ser
M0024241 MGAINPCE_00001 1573 13 Skin 0.12 protein_coding missense_variant MODERATE 1219C>G Pro407Ala
M0024242 MGAINPCE_00001 1638 7 Skin 0.06 protein_coding synonymous_variant LOW 1284T>C Pro428Pro
M0024243 MGAINPCE_00001 2157 6 Skin 0.05 protein_coding synonymous_variant LOW 1803G>T Pro601Pro
M0024244 MGAINPCE_00001 2175 6 Skin 0.05 protein_coding synonymous_variant LOW 1821A>G Lys607Lys
M0024245 MGAINPCE_00001 2178 6 Skin 0.05 protein_coding synonymous_variant LOW 1824C>G Pro608Pro
M0024246 MGAINPCE_00007 9121 3 Skin 0.03 protein_coding synonymous_variant LOW 696C>T Ala232Ala
M0024247 MGAINPCE_00010 11568 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -80G>A None
M0024248 MGAINPCE_00013 12762 3 Skin 0.03 protein_coding missense_variant MODERATE 217C>G Gln73Glu
M0024249 MGAINPCE_00021 20416 24 Skin 0.22 protein_coding synonymous_variant LOW 96T>C Ile32Ile
M0024250 MGAINPCE_00021 20428 22 Skin 0.20 protein_coding synonymous_variant LOW 84C>T Asn28Asn
M0024251 MGAINPCE_00029 30064 8 Skin 0.07 protein_coding synonymous_variant LOW 124C>T Leu42Leu
M0024252 MGAINPCE_00029 30098 8 Skin 0.07 protein_coding synonymous_variant LOW 90C>G Arg30Arg
M0024253 MGAINPCE_00029 29700 7 Skin 0.06 protein_coding missense_variant MODERATE 488C>T Ala163Val
M0024254 MGAINPCE_00029 29738 8 Skin 0.07 protein_coding synonymous_variant LOW 450G>A Ser150Ser
M0024255 MGAINPCE_00029 29750 7 Skin 0.06 protein_coding synonymous_variant LOW 438G>A Val146Val
M0024256 MGAINPCE_00004 6193 7 Skin 0.06 protein_coding synonymous_variant LOW 369C>T Val123Val
M0024257 MGAINPCE_00004 6268 7 Skin 0.06 protein_coding synonymous_variant LOW 444A>G Pro148Pro
M0024258 MGAINPCE_00007 8800 5 Skin 0.05 protein_coding synonymous_variant LOW 375C>T Val125Val
M0024259 MGAINPCE_00007 8803 5 Skin 0.05 protein_coding synonymous_variant LOW 378T>C His126His
M0024260 MGAINPCE_00002 3570 5 Skin 0.05 protein_coding synonymous_variant LOW 919A>C Arg307Arg
M0024261 MGAINPCE_00002 3629 4 Skin 0.04 protein_coding synonymous_variant LOW 978A>G Glu326Glu
M0024262 MGAINPCE_00004 6145 6 Skin 0.05 protein_coding synonymous_variant LOW 321C>T Ser107Ser
M0024263 MGAINPCE_00029 30122 9 Skin 0.08 protein_coding synonymous_variant LOW 66C>T Gly22Gly
M0024264 MGAINPCE_00029 30128 9 Skin 0.08 protein_coding synonymous_variant LOW 60A>G Thr20Thr
M0024265 MGAINPCE_00001 1194 4 Skin 0.04 protein_coding synonymous_variant LOW 840C>T Asn280Asn
M0024266 MGAINPCE_00001 1590 7 Skin 0.06 protein_coding synonymous_variant LOW 1236G>A Ser412Ser
M0024267 MGAINPCE_00001 1924 3 Skin 0.03 protein_coding missense_variant MODERATE 1570C>G Gln524Glu
M0024268 MGAINPCE_00002 3236 6 Skin 0.05 protein_coding synonymous_variant LOW 585T>C Tyr195Tyr
M0024269 MGAINPCE_00002 3243 6 Skin 0.05 protein_coding missense_variant MODERATE 592A>G Asn198Asp
M0024270 MGAINPCE_00002 3248 6 Skin 0.05 protein_coding missense_variant MODERATE 597A>T Glu199Asp
M0024271 MGAINPCE_00002 3266 6 Skin 0.05 protein_coding synonymous_variant LOW 615C>T Thr205Thr
M0024272 MGAINPCE_00002 3270 6 Skin 0.05 protein_coding missense_variant MODERATE 619C>A Leu207Ile
M0024273 MGAINPCE_00005 7102 4 Skin 0.04 protein_coding missense_variant MODERATE 376G>T Ala126Ser
M0024274 MGAINPCE_00026 30435 8 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4096C>T None
M0024275 MGAINPCE_00029 29642 4 Skin 0.04 protein_coding synonymous_variant LOW 546C>A Pro182Pro
M0024276 MGAINPCE_00029 29657 4 Skin 0.04 protein_coding synonymous_variant LOW 531A>G Arg177Arg
M0024277 MGAINPCE_00014 13867 3 Skin 0.03 protein_coding missense_variant MODERATE 292G>A Ala98Thr
M0024278 MGAINPCE_00014 13872 3 Skin 0.03 protein_coding synonymous_variant LOW 297G>T Leu99Leu
M0024279 MGAINPCE_00014 13890 3 Skin 0.03 protein_coding synonymous_variant LOW 315G>A Arg105Arg
M0024280 MGAINPCE_00014 13938 3 Skin 0.03 protein_coding synonymous_variant LOW 363G>C Pro121Pro
M0024281 MGAINPCE_00014 13941 3 Skin 0.03 protein_coding missense_variant MODERATE 366C>A Phe122Leu
M0024282 MGAINPCE_00014 13951 3 Skin 0.03 protein_coding missense_variant MODERATE 376A>G Ile126Val
M0024283 MGAINPCE_00014 13956 3 Skin 0.03 protein_coding synonymous_variant LOW 381T>C Arg127Arg
M0024284 MGAINPCE_00014 13962 3 Skin 0.03 protein_coding synonymous_variant LOW 387A>G Pro129Pro
M0024285 MGAINPCE_00014 13989 3 Skin 0.03 protein_coding synonymous_variant LOW 414C>A Ile138Ile
M0024286 MGAINPCE_00014 14001 3 Skin 0.03 protein_coding synonymous_variant LOW 426T>C His142His
M0024287 MGAINPCE_00014 14010 3 Skin 0.03 protein_coding synonymous_variant LOW 435A>C Arg145Arg
M0024288 MGAINPCE_00014 14037 3 Skin 0.03 protein_coding synonymous_variant LOW 462C>T Asp154Asp
M0024289 MGAINPCE_00014 14044 3 Skin 0.03 protein_coding missense_variant MODERATE 469A>C Thr157Pro
M0024290 MGAINPCE_00015 14767 4 Skin 0.04 protein_coding missense_variant MODERATE 1015A>G Ile339Val
M0024291 MGAINPCE_00015 14837 3 Skin 0.03 protein_coding synonymous_variant LOW 945T>G Pro315Pro
M0024292 MGAINPCE_00015 14872 3 Skin 0.03 protein_coding missense_variant MODERATE 910C>A Gln304Lys
M0024293 MGAINPCE_00015 14893 3 Skin 0.03 protein_coding missense_variant MODERATE 889C>A Leu297Ile
M0024294 MGAINPCE_00018 18137 14 Skin 0.13 protein_coding synonymous_variant LOW 405C>G Leu135Leu
M0024295 MGAINPCE_00018 22912 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -4371C>A None
M0024296 MGAINPCE_00030 30733 5 Skin 0.05 protein_coding missense_variant MODERATE 244T>C Phe82Leu
M0024297 MGAINPCE_00030 30749 5 Skin 0.05 protein_coding missense_variant MODERATE 228T>A His76Gln
M0024298 MGAINPCE_00030 30762 5 Skin 0.05 protein_coding missense_variant MODERATE 215T>C Leu72Pro
M0024299 MGAINPCE_00001 1107 3 Skin 0.03 protein_coding synonymous_variant LOW 753G>C Arg251Arg
M0024300 MGAINPCE_00015 15488 4 Skin 0.04 protein_coding synonymous_variant LOW 294C>T Asn98Asn
M0024301 MGAINPCE_00026 25301 3 Skin 0.03 protein_coding missense_variant MODERATE 1039A>G Lys347Glu
M0024302 MGAINPCE_00015 19014 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3233C>T None
M0024303 MGAINPCE_00024 24172 3 Skin 0.03 protein_coding missense_variant MODERATE 18A>T Glu6Asp
M0024304 MGAINPCE_00027 26972 3 Skin 0.03 protein_coding synonymous_variant LOW 927A>C Ala309Ala
M0024305 MGAINPCE_00001 873 3 Skin 0.03 protein_coding synonymous_variant LOW 519T>C Thr173Thr
M0024306 MGAINPCE_00001 876 3 Skin 0.03 protein_coding synonymous_variant LOW 522C>T Arg174Arg
M0024307 MGAINPCE_00001 898 3 Skin 0.03 protein_coding synonymous_variant LOW 544C>T Leu182Leu
M0024308 MGAINPCE_00016 16233 4 Skin 0.04 protein_coding synonymous_variant LOW 657C>T Tyr219Tyr
M0024309 MGAINPCE_00016 16238 4 Skin 0.04 protein_coding missense_variant MODERATE 652A>T Thr218Ser
M0024310 MGAINPCE_00016 16239 4 Skin 0.04 protein_coding synonymous_variant LOW 651T>C Ala217Ala
M0024311 MGAINPCE_00026 31000 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -4661G>T None
M0024312 MGAINPCE_00002 3443 5 Skin 0.05 protein_coding synonymous_variant LOW 792C>T Asp264Asp
M0024313 MGAINPCE_00030 30900 3 Skin 0.03 protein_coding missense_variant MODERATE 77T>C Val26Ala
M0024314 MGAINPCE_00030 30922 3 Skin 0.03 protein_coding missense_variant MODERATE 55C>T Leu19Phe
M0024315 MGAINPCE_00024 24018 3 Skin 0.03 protein_coding missense_variant MODERATE 172C>G Pro58Ala






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
MGAINPCE_00023 2.A.53.3.1 73.9 1e-199 1 494 0.9980 0.9939 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.53 The Sulfate Permease (SulP) Family