Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2239
  Reference Plasmid   1111525849755361_bin.25__k141_1229118
  Reference Plasmid Size   13365
  Reference Plasmid GC Content   0.67
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0030655 EKAKKJAA_00002 1843 15 Skin 0.45 protein_coding missense_variant MODERATE 562C>T Pro188Ser
M0030656 EKAKKJAA_00003 2676 14 Skin 0.42 protein_coding synonymous_variant LOW 174T>C His58His
M0030657 EKAKKJAA_00004 3071 14 Skin 0.42 protein_coding synonymous_variant LOW 832T>C Leu278Leu
M0030658 EKAKKJAA_00004 3099 11 Skin 0.33 protein_coding synonymous_variant LOW 804C>T Asn268Asn
M0030659 EKAKKJAA_00004 3126 11 Skin 0.33 protein_coding synonymous_variant LOW 777G>C Gly259Gly
M0030660 EKAKKJAA_00004 3138 11 Skin 0.33 protein_coding synonymous_variant LOW 765T>C Gly255Gly
M0030661 EKAKKJAA_00004 3465 10 Skin 0.30 protein_coding synonymous_variant LOW 438A>G Lys146Lys
M0030662 EKAKKJAA_00004 3477 10 Skin 0.30 protein_coding synonymous_variant LOW 426T>C Ala142Ala
M0030663 EKAKKJAA_00005 4083 7 Skin 0.21 protein_coding synonymous_variant LOW 1110G>A Glu370Glu
M0030664 EKAKKJAA_00005 4212 20 Skin 0.61 protein_coding synonymous_variant LOW 981C>T Ala327Ala
M0030665 EKAKKJAA_00005 4320 10 Skin 0.30 protein_coding synonymous_variant LOW 873G>A Lys291Lys
M0030666 EKAKKJAA_00005 4346 10 Skin 0.30 protein_coding synonymous_variant LOW 847T>C Leu283Leu
M0030667 EKAKKJAA_00005 4377 31 Skin 0.94 protein_coding synonymous_variant LOW 816T>C Gly272Gly
M0030668 EKAKKJAA_00005 4428 11 Skin 0.33 protein_coding synonymous_variant LOW 765T>C Ser255Ser
M0030669 EKAKKJAA_00005 4664 18 Skin 0.55 protein_coding synonymous_variant LOW 529T>C Leu177Leu
M0030670 EKAKKJAA_00005 5079 13 Skin 0.39 protein_coding synonymous_variant LOW 114C>T Thr38Thr
M0030671 EKAKKJAA_00007 6295 10 Skin 0.30 protein_coding synonymous_variant LOW 258C>T Arg86Arg
M0030672 EKAKKJAA_00007 6421 11 Skin 0.33 protein_coding synonymous_variant LOW 384A>G Glu128Glu
M0030673 EKAKKJAA_00007 6460 12 Skin 0.36 protein_coding synonymous_variant LOW 423A>G Gln141Gln
M0030674 EKAKKJAA_00007 6766 15 Skin 0.45 protein_coding synonymous_variant LOW 729C>T Gly243Gly
M0030675 EKAKKJAA_00007 6832 3 Skin 0.09 protein_coding synonymous_variant LOW 795C>A Ala265Ala
M0030676 EKAKKJAA_00007 6844 3 Skin 0.09 protein_coding synonymous_variant LOW 807T>C Arg269Arg
M0030677 EKAKKJAA_00007 6862 3 Skin 0.09 protein_coding synonymous_variant LOW 825G>C Arg275Arg
M0030678 EKAKKJAA_00007 6873 3 Skin 0.09 protein_coding missense_variant MODERATE 836C>A Pro279His
M0030679 EKAKKJAA_00007 7353 5 Skin 0.15 protein_coding missense_variant MODERATE 1316A>G His439Arg
M0030680 EKAKKJAA_00008 7555 4 Skin 0.12 protein_coding missense_variant MODERATE 1790T>C Val597Ala
M0030681 EKAKKJAA_00008 7893 10 Skin 0.30 protein_coding synonymous_variant LOW 1452A>T Ile484Ile
M0030682 EKAKKJAA_00008 7913 10 Skin 0.30 protein_coding missense_variant MODERATE 1432G>A Gly478Ser
M0030683 EKAKKJAA_00008 7974 6 Skin 0.18 protein_coding synonymous_variant LOW 1371A>G Glu457Glu
M0030684 EKAKKJAA_00008 8007 7 Skin 0.21 protein_coding synonymous_variant LOW 1338G>A Glu446Glu
M0030685 EKAKKJAA_00008 8487 3 Skin 0.09 protein_coding synonymous_variant LOW 858G>T Leu286Leu
M0030686 EKAKKJAA_00008 8615 4 Skin 0.12 protein_coding synonymous_variant LOW 730C>T Leu244Leu
M0030687 EKAKKJAA_00008 8812 11 Skin 0.33 protein_coding missense_variant MODERATE 533G>C Gly178Ala
M0030688 EKAKKJAA_00002 2035 6 Skin 0.18 protein_coding missense_variant MODERATE 370T>A Phe124Ile
M0030689 EKAKKJAA_00002 2036 6 Skin 0.18 protein_coding synonymous_variant LOW 369T>C Ser123Ser
M0030690 EKAKKJAA_00002 2044 6 Skin 0.18 protein_coding missense_variant MODERATE 361G>A Val121Ile
M0030691 EKAKKJAA_00002 2051 6 Skin 0.18 protein_coding synonymous_variant LOW 354T>C Ser118Ser
M0030692 EKAKKJAA_00002 2071 6 Skin 0.18 protein_coding synonymous_variant LOW 334T>C Leu112Leu
M0030693 EKAKKJAA_00002 2072 6 Skin 0.18 protein_coding synonymous_variant LOW 333G>C Ala111Ala
M0030694 EKAKKJAA_00002 2075 6 Skin 0.18 protein_coding synonymous_variant LOW 330T>C Ile110Ile
M0030695 EKAKKJAA_00002 2081 6 Skin 0.18 protein_coding synonymous_variant LOW 324C>T Ala108Ala
M0030696 EKAKKJAA_00002 2085 6 Skin 0.18 protein_coding missense_variant MODERATE 320G>A Arg107Lys
M0030697 EKAKKJAA_00002 2093 6 Skin 0.18 protein_coding synonymous_variant LOW 312C>T Arg104Arg
M0030698 EKAKKJAA_00002 2327 8 Skin 0.24 protein_coding synonymous_variant LOW 78C>T Gly26Gly
M0030699 EKAKKJAA_00004 3297 19 Skin 0.58 protein_coding missense_variant MODERATE 606G>C Gln202His
M0030700 EKAKKJAA_00005 4486 13 Skin 0.39 protein_coding missense_variant MODERATE 707G>A Arg236His
M0030701 EKAKKJAA_00005 4491 14 Skin 0.42 protein_coding synonymous_variant LOW 702G>A Val234Val
M0030702 EKAKKJAA_00005 4494 14 Skin 0.42 protein_coding synonymous_variant LOW 699C>T Asp233Asp
M0030703 EKAKKJAA_00002 5241 15 Skin 0.45 protein_coding upstream_gene_variant MODIFIER -2837T>C None
M0030704 EKAKKJAA_00006 5484 18 Skin 0.55 protein_coding synonymous_variant LOW 111C>T Asp37Asp
M0030705 EKAKKJAA_00006 5694 19 Skin 0.58 protein_coding synonymous_variant LOW 321G>A Glu107Glu
M0030706 EKAKKJAA_00006 5854 12 Skin 0.36 protein_coding synonymous_variant LOW 481T>C Leu161Leu
M0030707 EKAKKJAA_00006 5871 12 Skin 0.36 protein_coding synonymous_variant LOW 498T>C Gly166Gly
M0030708 EKAKKJAA_00007 6949 11 Skin 0.33 protein_coding synonymous_variant LOW 912T>C Leu304Leu
M0030709 EKAKKJAA_00007 7315 10 Skin 0.30 protein_coding synonymous_variant LOW 1278T>C Gly426Gly
M0030710 EKAKKJAA_00008 7608 11 Skin 0.33 protein_coding synonymous_variant LOW 1737A>G Leu579Leu
M0030711 EKAKKJAA_00001 753 3 Skin 0.09 protein_coding synonymous_variant LOW 747T>C Ala249Ala
M0030712 EKAKKJAA_00003 2577 10 Skin 0.30 protein_coding synonymous_variant LOW 273C>T Gly91Gly
M0030713 EKAKKJAA_00004 3375 16 Skin 0.48 protein_coding synonymous_variant LOW 528C>T Val176Val
M0030714 EKAKKJAA_00004 3435 20 Skin 0.61 protein_coding synonymous_variant LOW 468C>T Gly156Gly
M0030715 EKAKKJAA_00004 3890 21 Skin 0.64 protein_coding missense_variant MODERATE 13C>T Leu5Phe
M0030716 EKAKKJAA_00005 4695 11 Skin 0.33 protein_coding synonymous_variant LOW 498T>C Asp166Asp
M0030717 EKAKKJAA_00006 5643 9 Skin 0.27 protein_coding synonymous_variant LOW 270G>C Gly90Gly
M0030718 EKAKKJAA_00006 5652 9 Skin 0.27 protein_coding synonymous_variant LOW 279C>A Leu93Leu
M0030719 EKAKKJAA_00007 6511 6 Skin 0.18 protein_coding synonymous_variant LOW 474A>G Glu158Glu
M0030720 EKAKKJAA_00007 6532 5 Skin 0.15 protein_coding synonymous_variant LOW 495C>A Arg165Arg
M0030721 EKAKKJAA_00007 6556 5 Skin 0.15 protein_coding synonymous_variant LOW 519T>C Asp173Asp
M0030722 EKAKKJAA_00003 2703 12 Skin 0.36 protein_coding synonymous_variant LOW 147T>C Gly49Gly
M0030723 EKAKKJAA_00003 2706 12 Skin 0.36 protein_coding synonymous_variant LOW 144T>C Cys48Cys
M0030724 EKAKKJAA_00006 5961 6 Skin 0.18 protein_coding synonymous_variant LOW 588G>A Arg196Arg
M0030725 EKAKKJAA_00006 5980 6 Skin 0.18 protein_coding missense_variant MODERATE 607C>G Arg203Gly
M0030726 EKAKKJAA_00006 6003 6 Skin 0.18 protein_coding synonymous_variant LOW 630C>T Thr210Thr
M0030727 EKAKKJAA_00006 6006 6 Skin 0.18 protein_coding synonymous_variant LOW 633C>T Phe211Phe
M0030728 EKAKKJAA_00006 5576 8 Skin 0.24 protein_coding missense_variant MODERATE 203A>G Glu68Gly
M0030729 EKAKKJAA_00002 945 3 Skin 0.09 protein_coding missense_variant MODERATE 1460C>G Ala487Gly
M0030730 EKAKKJAA_00002 954 3 Skin 0.09 protein_coding missense_variant MODERATE 1451G>C Gly484Ala
M0030731 EKAKKJAA_00002 956 3 Skin 0.09 protein_coding synonymous_variant LOW 1449C>G Leu483Leu
M0030732 EKAKKJAA_00002 975 3 Skin 0.09 protein_coding missense_variant MODERATE 1430C>G Ala477Gly
M0030733 EKAKKJAA_00002 983 3 Skin 0.09 protein_coding synonymous_variant LOW 1422G>A Ala474Ala
M0030734 EKAKKJAA_00002 1004 3 Skin 0.09 protein_coding missense_variant MODERATE 1401G>C Trp467Cys
M0030735 EKAKKJAA_00002 1005 3 Skin 0.09 protein_coding stop_gained HIGH 1400G>A Trp467*
M0030736 EKAKKJAA_00002 1010 3 Skin 0.09 protein_coding synonymous_variant LOW 1395C>T Ile465Ile
M0030737 EKAKKJAA_00002 1022 3 Skin 0.09 protein_coding synonymous_variant LOW 1383C>T Gly461Gly
M0030738 EKAKKJAA_00002 1043 3 Skin 0.09 protein_coding synonymous_variant LOW 1362T>C Arg454Arg
M0030739 EKAKKJAA_00002 1076 3 Skin 0.09 protein_coding synonymous_variant LOW 1329G>C Val443Val
M0030740 EKAKKJAA_00002 1082 3 Skin 0.09 protein_coding synonymous_variant LOW 1323C>T Gly441Gly
M0030741 EKAKKJAA_00002 1103 3 Skin 0.09 protein_coding synonymous_variant LOW 1302A>G Pro434Pro
M0030742 EKAKKJAA_00002 1130 3 Skin 0.09 protein_coding synonymous_variant LOW 1275T>C Gly425Gly
M0030743 EKAKKJAA_00002 1145 3 Skin 0.09 protein_coding synonymous_variant LOW 1260C>T Gly420Gly
M0030744 EKAKKJAA_00002 1169 3 Skin 0.09 protein_coding synonymous_variant LOW 1236C>G Thr412Thr
M0030745 EKAKKJAA_00002 1170 3 Skin 0.09 protein_coding missense_variant MODERATE 1235C>T Thr412Ile
M0030746 EKAKKJAA_00002 1171 3 Skin 0.09 protein_coding missense_variant MODERATE 1234A>G Thr412Ala
M0030747 EKAKKJAA_00002 1181 3 Skin 0.09 protein_coding synonymous_variant LOW 1224A>G Val408Val
M0030748 EKAKKJAA_00002 1219 4 Skin 0.12 protein_coding missense_variant MODERATE 1186G>A Ala396Thr
M0030749 EKAKKJAA_00002 1223 4 Skin 0.12 protein_coding synonymous_variant LOW 1182G>A Val394Val
M0030750 EKAKKJAA_00002 1241 4 Skin 0.12 protein_coding synonymous_variant LOW 1164A>G Val388Val
M0030751 EKAKKJAA_00002 1245 4 Skin 0.12 protein_coding missense_variant MODERATE 1160C>G Ala387Gly
M0030752 EKAKKJAA_00002 1246 4 Skin 0.12 protein_coding missense_variant MODERATE 1159G>A Ala387Thr
M0030753 EKAKKJAA_00002 1265 4 Skin 0.12 protein_coding synonymous_variant LOW 1140A>C Gly380Gly
M0030754 EKAKKJAA_00002 1274 4 Skin 0.12 protein_coding synonymous_variant LOW 1131G>C Pro377Pro
M0030755 EKAKKJAA_00002 1286 4 Skin 0.12 protein_coding synonymous_variant LOW 1119G>C Val373Val
M0030756 EKAKKJAA_00002 1288 4 Skin 0.12 protein_coding missense_variant MODERATE 1117G>A Val373Met
M0030757 EKAKKJAA_00002 1291 4 Skin 0.12 protein_coding synonymous_variant LOW 1114C>T Leu372Leu
M0030758 EKAKKJAA_00002 1292 4 Skin 0.12 protein_coding synonymous_variant LOW 1113G>C Leu371Leu
M0030759 EKAKKJAA_00002 1328 4 Skin 0.12 protein_coding synonymous_variant LOW 1077C>T Gly359Gly
M0030760 EKAKKJAA_00002 1352 4 Skin 0.12 protein_coding synonymous_variant LOW 1053G>A Glu351Glu
M0030761 EKAKKJAA_00002 1370 4 Skin 0.12 protein_coding synonymous_variant LOW 1035C>G Pro345Pro
M0030762 EKAKKJAA_00002 1394 4 Skin 0.12 protein_coding synonymous_variant LOW 1011G>A Ala337Ala
M0030763 EKAKKJAA_00002 1412 4 Skin 0.12 protein_coding synonymous_variant LOW 993G>C Thr331Thr
M0030764 EKAKKJAA_00002 1421 4 Skin 0.12 protein_coding synonymous_variant LOW 984T>G Ser328Ser
M0030765 EKAKKJAA_00002 1424 4 Skin 0.12 protein_coding synonymous_variant LOW 981C>T Gly327Gly
M0030766 EKAKKJAA_00002 1460 5 Skin 0.15 protein_coding synonymous_variant LOW 945C>T Gly315Gly
M0030767 EKAKKJAA_00002 1478 5 Skin 0.15 protein_coding synonymous_variant LOW 927C>T Asn309Asn
M0030768 EKAKKJAA_00002 1484 5 Skin 0.15 protein_coding synonymous_variant LOW 921G>C Ser307Ser
M0030769 EKAKKJAA_00002 1486 5 Skin 0.15 protein_coding missense_variant MODERATE 919T>G Ser307Ala
M0030770 EKAKKJAA_00002 1493 5 Skin 0.15 protein_coding synonymous_variant LOW 912C>A Ala304Ala
M0030771 EKAKKJAA_00002 1496 5 Skin 0.15 protein_coding synonymous_variant LOW 909C>G Ala303Ala
M0030772 EKAKKJAA_00002 1517 5 Skin 0.15 protein_coding synonymous_variant LOW 888C>T Asp296Asp
M0030773 EKAKKJAA_00002 1526 5 Skin 0.15 protein_coding synonymous_variant LOW 879T>C Arg293Arg
M0030774 EKAKKJAA_00002 1529 5 Skin 0.15 protein_coding synonymous_variant LOW 876T>C Gly292Gly
M0030775 EKAKKJAA_00002 1536 5 Skin 0.15 protein_coding missense_variant MODERATE 869C>A Ala290Asp
M0030776 EKAKKJAA_00002 1538 5 Skin 0.15 protein_coding synonymous_variant LOW 867T>C Gly289Gly
M0030777 EKAKKJAA_00002 1571 5 Skin 0.15 protein_coding synonymous_variant LOW 834C>T Ala278Ala
M0030778 EKAKKJAA_00002 1604 5 Skin 0.15 protein_coding synonymous_variant LOW 801G>C Thr267Thr
M0030779 EKAKKJAA_00002 1631 5 Skin 0.15 protein_coding synonymous_variant LOW 774C>T Ser258Ser
M0030780 EKAKKJAA_00002 1639 5 Skin 0.15 protein_coding missense_variant MODERATE 766C>G Leu256Val
M0030781 EKAKKJAA_00002 1691 5 Skin 0.15 protein_coding synonymous_variant LOW 714C>T Ser238Ser
M0030782 EKAKKJAA_00002 1700 5 Skin 0.15 protein_coding synonymous_variant LOW 705G>C Val235Val
M0030783 EKAKKJAA_00002 1708 5 Skin 0.15 protein_coding missense_variant MODERATE 697C>A Gln233Lys
M0030784 EKAKKJAA_00002 1727 5 Skin 0.15 protein_coding synonymous_variant LOW 678G>A Glu226Glu
M0030785 EKAKKJAA_00002 1763 5 Skin 0.15 protein_coding synonymous_variant LOW 642T>C Gly214Gly
M0030786 EKAKKJAA_00002 1805 4 Skin 0.12 protein_coding synonymous_variant LOW 600G>C Val200Val
M0030787 EKAKKJAA_00002 1812 4 Skin 0.12 protein_coding missense_variant MODERATE 593A>G Asp198Gly
M0030788 EKAKKJAA_00002 1823 4 Skin 0.12 protein_coding synonymous_variant LOW 582T>C Arg194Arg
M0030789 EKAKKJAA_00002 1832 4 Skin 0.12 protein_coding synonymous_variant LOW 573T>C Gly191Gly
M0030790 EKAKKJAA_00002 1844 4 Skin 0.12 protein_coding synonymous_variant LOW 561T>C Asp187Asp
M0030791 EKAKKJAA_00002 1850 4 Skin 0.12 protein_coding synonymous_variant LOW 555C>T Gly185Gly
M0030792 EKAKKJAA_00002 1853 4 Skin 0.12 protein_coding synonymous_variant LOW 552G>C Val184Val
M0030793 EKAKKJAA_00002 1856 4 Skin 0.12 protein_coding synonymous_variant LOW 549G>C Thr183Thr
M0030794 EKAKKJAA_00002 1889 3 Skin 0.09 protein_coding synonymous_variant LOW 516G>C Leu172Leu
M0030795 EKAKKJAA_00002 1892 3 Skin 0.09 protein_coding synonymous_variant LOW 513G>C Thr171Thr
M0030796 EKAKKJAA_00002 1925 4 Skin 0.12 protein_coding synonymous_variant LOW 480G>C Leu160Leu
M0030797 EKAKKJAA_00002 1928 4 Skin 0.12 protein_coding synonymous_variant LOW 477C>T Cys159Cys
M0030798 EKAKKJAA_00002 1943 4 Skin 0.12 protein_coding synonymous_variant LOW 462T>C Ile154Ile
M0030799 EKAKKJAA_00002 1952 4 Skin 0.12 protein_coding synonymous_variant LOW 453G>A Val151Val
M0030800 EKAKKJAA_00002 1976 4 Skin 0.12 protein_coding synonymous_variant LOW 429G>C Ala143Ala
M0030801 EKAKKJAA_00003 2429 5 Skin 0.15 protein_coding synonymous_variant LOW 421C>T Leu141Leu
M0030802 EKAKKJAA_00005 4887 9 Skin 0.27 protein_coding synonymous_variant LOW 306C>T Thr102Thr
M0030803 EKAKKJAA_00008 7731 8 Skin 0.24 protein_coding synonymous_variant LOW 1614A>G Ala538Ala
M0030804 EKAKKJAA_00008 7740 8 Skin 0.24 protein_coding synonymous_variant LOW 1605C>T Gly535Gly
M0030805 EKAKKJAA_00008 8765 5 Skin 0.15 protein_coding synonymous_variant LOW 580C>T Leu194Leu
M0030806 EKAKKJAA_00008 9300 6 Skin 0.18 protein_coding synonymous_variant LOW 45A>G Ser15Ser
M0030807 EKAKKJAA_00008 9311 5 Skin 0.15 protein_coding synonymous_variant LOW 34T>C Leu12Leu
M0030808 EKAKKJAA_00005 9438 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4246C>T None
M0030809 EKAKKJAA_00009 9704 6 Skin 0.18 protein_coding missense_variant MODERATE 551C>T Thr184Met
M0030810 EKAKKJAA_00009 9731 6 Skin 0.18 protein_coding missense_variant MODERATE 524G>T Gly175Val
M0030811 EKAKKJAA_00009 9771 6 Skin 0.18 protein_coding missense_variant MODERATE 484T>C Phe162Leu
M0030812 EKAKKJAA_00009 10210 3 Skin 0.09 protein_coding synonymous_variant LOW 45T>C Gly15Gly
M0030813 EKAKKJAA_00008 10399 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -1055T>A None
M0030814 EKAKKJAA_00008 10401 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -1057G>A None
M0030815 EKAKKJAA_00011 10758 3 Skin 0.09 protein_coding missense_variant MODERATE 1055G>C Ser352Thr
M0030816 EKAKKJAA_00011 10823 4 Skin 0.12 protein_coding synonymous_variant LOW 990A>G Pro330Pro
M0030817 EKAKKJAA_00011 10834 4 Skin 0.12 protein_coding missense_variant MODERATE 979C>G Pro327Ala
M0030818 EKAKKJAA_00011 10865 4 Skin 0.12 protein_coding stop_gained HIGH 948G>A Trp316*
M0030819 EKAKKJAA_00008 12190 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -2846C>T None
M0030820 EKAKKJAA_00008 12211 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -2867G>A None
M0030821 EKAKKJAA_00008 8928 3 Skin 0.09 protein_coding synonymous_variant LOW 417T>C Phe139Phe
M0030822 EKAKKJAA_00008 8949 3 Skin 0.09 protein_coding synonymous_variant LOW 396A>G Arg132Arg
M0030823 EKAKKJAA_00008 8955 3 Skin 0.09 protein_coding synonymous_variant LOW 390C>T Ser130Ser
M0030824 EKAKKJAA_00008 9033 5 Skin 0.15 protein_coding synonymous_variant LOW 312G>C Arg104Arg
M0030825 EKAKKJAA_00008 9104 5 Skin 0.15 protein_coding missense_variant MODERATE 241A>C Met81Leu
M0030826 EKAKKJAA_00008 10319 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -975A>G None
M0030827 EKAKKJAA_00007 6667 5 Skin 0.15 protein_coding synonymous_variant LOW 630T>C Arg210Arg
M0030828 EKAKKJAA_00011 10797 3 Skin 0.09 protein_coding missense_variant MODERATE 1016A>T Asp339Val
M0030829 EKAKKJAA_00011 10807 3 Skin 0.09 protein_coding missense_variant MODERATE 1006A>G Thr336Ala
M0030830 EKAKKJAA_00004 3609 3 Skin 0.09 protein_coding synonymous_variant LOW 294C>G Leu98Leu
M0030831 EKAKKJAA_00004 3627 3 Skin 0.09 protein_coding synonymous_variant LOW 276C>T Phe92Phe
M0030832 EKAKKJAA_00004 3642 3 Skin 0.09 protein_coding synonymous_variant LOW 261A>G Gly87Gly
M0030833 EKAKKJAA_00004 3653 3 Skin 0.09 protein_coding missense_variant MODERATE 250T>G Ser84Ala
M0030834 EKAKKJAA_00008 8151 3 Skin 0.09 protein_coding synonymous_variant LOW 1194A>G Gln398Gln
M0030835 EKAKKJAA_00009 9983 3 Skin 0.09 protein_coding missense_variant MODERATE 272T>A Val91Asp
M0030836 EKAKKJAA_00009 10012 3 Skin 0.09 protein_coding synonymous_variant LOW 243T>C Gly81Gly






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term