Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2242
  Reference Plasmid   1111525849755503_bin.7__k141_145949
  Reference Plasmid Size   35529
  Reference Plasmid GC Content   0.70
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0031031 PPIBLEHL_00015 9734 4 Skin 0.12 protein_coding synonymous_variant LOW 876T>C Ala292Ala
M0031032 PPIBLEHL_00015 9876 4 Skin 0.12 protein_coding missense_variant MODERATE 734C>A Ala245Glu
M0031033 PPIBLEHL_00015 9986 10 Skin 0.30 protein_coding synonymous_variant LOW 624A>C Thr208Thr
M0031034 PPIBLEHL_00015 10082 7 Skin 0.21 protein_coding synonymous_variant LOW 528C>G Gly176Gly
M0031035 PPIBLEHL_00015 10142 6 Skin 0.18 protein_coding synonymous_variant LOW 468C>T Ala156Ala
M0031036 PPIBLEHL_00017 11097 6 Skin 0.18 protein_coding synonymous_variant LOW 1041C>G Arg347Arg
M0031037 PPIBLEHL_00017 11117 7 Skin 0.21 protein_coding missense_variant MODERATE 1021A>G Thr341Ala
M0031038 PPIBLEHL_00017 11178 7 Skin 0.21 protein_coding synonymous_variant LOW 960G>C Ala320Ala
M0031039 PPIBLEHL_00017 11179 7 Skin 0.21 protein_coding missense_variant MODERATE 959C>A Ala320Glu
M0031040 PPIBLEHL_00017 11211 7 Skin 0.21 protein_coding synonymous_variant LOW 927G>C Arg309Arg
M0031041 PPIBLEHL_00017 11223 4 Skin 0.12 protein_coding synonymous_variant LOW 915T>C Ala305Ala
M0031042 PPIBLEHL_00017 11249 7 Skin 0.21 protein_coding missense_variant MODERATE 889A>G Ser297Gly
M0031043 PPIBLEHL_00017 11569 10 Skin 0.30 protein_coding missense_variant MODERATE 569G>A Gly190Asp
M0031044 PPIBLEHL_00018 12536 5 Skin 0.15 protein_coding missense_variant MODERATE 286A>G Thr96Ala
M0031045 PPIBLEHL_00018 12537 3 Skin 0.09 protein_coding missense_variant MODERATE 287C>T Thr96Ile
M0031046 PPIBLEHL_00018 12603 6 Skin 0.18 protein_coding missense_variant MODERATE 353A>G Asn118Ser
M0031047 PPIBLEHL_00018 12612 3 Skin 0.09 protein_coding missense_variant MODERATE 362A>G Gln121Arg
M0031048 PPIBLEHL_00018 12880 4 Skin 0.12 protein_coding synonymous_variant LOW 630C>G Leu210Leu
M0031049 PPIBLEHL_00001 24 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -296A>G None
M0031050 PPIBLEHL_00001 27 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -293G>A None
M0031051 PPIBLEHL_00001 35 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -285G>C None
M0031052 PPIBLEHL_00001 190 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -130T>G None
M0031053 PPIBLEHL_00001 209 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -111A>C None
M0031054 PPIBLEHL_00001 261 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -59T>C None
M0031055 PPIBLEHL_00001 304 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -16C>T None
M0031056 PPIBLEHL_00001 392 6 Skin 0.18 protein_coding missense_variant MODERATE 73C>A Pro25Thr
M0031057 PPIBLEHL_00002 662 3 Skin 0.09 protein_coding missense_variant MODERATE 187A>G Asn63Asp
M0031058 PPIBLEHL_00002 713 3 Skin 0.09 protein_coding missense_variant MODERATE 136C>A Arg46Ser
M0031059 PPIBLEHL_00002 731 3 Skin 0.09 protein_coding missense_variant MODERATE 118G>C Gly40Arg
M0031060 PPIBLEHL_00002 754 3 Skin 0.09 protein_coding missense_variant MODERATE 95C>G Thr32Ser
M0031061 PPIBLEHL_00002 755 3 Skin 0.09 protein_coding missense_variant MODERATE 94A>G Thr32Ala
M0031062 PPIBLEHL_00002 774 3 Skin 0.09 protein_coding missense_variant MODERATE 75A>C Leu25Phe
M0031063 PPIBLEHL_00003 1111 4 Skin 0.12 protein_coding missense_variant MODERATE 1036C>A Gln346Lys
M0031064 PPIBLEHL_00003 1144 4 Skin 0.12 protein_coding missense_variant MODERATE 1003C>G Gln335Glu
M0031065 PPIBLEHL_00022 16870 5 Skin 0.15 protein_coding missense_variant MODERATE 256C>G Leu86Val
M0031066 PPIBLEHL_00022 16963 5 Skin 0.15 protein_coding missense_variant MODERATE 349A>G Thr117Ala
M0031067 PPIBLEHL_00022 16971 5 Skin 0.15 protein_coding synonymous_variant LOW 357G>C Thr119Thr
M0031068 PPIBLEHL_00022 17025 5 Skin 0.15 protein_coding synonymous_variant LOW 411C>T His137His
M0031069 PPIBLEHL_00022 17058 5 Skin 0.15 protein_coding synonymous_variant LOW 444G>C Arg148Arg
M0031070 PPIBLEHL_00023 18222 5 Skin 0.15 protein_coding synonymous_variant LOW 439C>A Arg147Arg
M0031071 PPIBLEHL_00023 18353 5 Skin 0.15 protein_coding synonymous_variant LOW 570T>C Asp190Asp
M0031072 PPIBLEHL_00023 18356 5 Skin 0.15 protein_coding synonymous_variant LOW 573G>C Leu191Leu
M0031073 PPIBLEHL_00023 18386 5 Skin 0.15 protein_coding synonymous_variant LOW 603G>C Pro201Pro
M0031074 PPIBLEHL_00025 19418 7 Skin 0.21 protein_coding synonymous_variant LOW 477C>T His159His
M0031075 PPIBLEHL_00025 19424 7 Skin 0.21 protein_coding synonymous_variant LOW 483C>T His161His
M0031076 PPIBLEHL_00026 19859 9 Skin 0.27 protein_coding missense_variant MODERATE 193A>G Asn65Asp
M0031077 PPIBLEHL_00026 20316 8 Skin 0.24 protein_coding missense_variant MODERATE 650G>T Arg217Met
M0031078 PPIBLEHL_00003 1703 5 Skin 0.15 protein_coding synonymous_variant LOW 444C>G Val148Val
M0031079 PPIBLEHL_00003 1706 5 Skin 0.15 protein_coding synonymous_variant LOW 441T>G Ser147Ser
M0031080 PPIBLEHL_00003 1769 3 Skin 0.09 protein_coding synonymous_variant LOW 378C>T Asp126Asp
M0031081 PPIBLEHL_00003 1796 4 Skin 0.12 protein_coding synonymous_variant LOW 351G>C Arg117Arg
M0031082 PPIBLEHL_00005 3970 7 Skin 0.21 protein_coding missense_variant MODERATE 108T>A Asp36Glu
M0031083 PPIBLEHL_00005 4006 5 Skin 0.15 protein_coding synonymous_variant LOW 144C>G Ala48Ala
M0031084 PPIBLEHL_00005 4015 3 Skin 0.09 protein_coding synonymous_variant LOW 153G>A Thr51Thr
M0031085 PPIBLEHL_00005 4060 4 Skin 0.12 protein_coding synonymous_variant LOW 198C>G Val66Val
M0031086 PPIBLEHL_00005 4101 6 Skin 0.18 protein_coding missense_variant MODERATE 239A>G His80Arg
M0031087 PPIBLEHL_00005 4469 4 Skin 0.12 protein_coding missense_variant MODERATE 607C>A Leu203Ile
M0031088 PPIBLEHL_00005 4496 5 Skin 0.15 protein_coding stop_gained HIGH 634C>T Arg212*
M0031089 PPIBLEHL_00005 4517 8 Skin 0.24 protein_coding missense_variant MODERATE 655G>C Val219Leu
M0031090 PPIBLEHL_00006 4549 9 Skin 0.27 protein_coding missense_variant MODERATE 89A>G Asp30Gly
M0031091 PPIBLEHL_00006 4670 3 Skin 0.09 protein_coding synonymous_variant LOW 210C>G Ala70Ala
M0031092 PPIBLEHL_00007 4872 6 Skin 0.18 protein_coding synonymous_variant LOW 855G>T Pro285Pro
M0031093 PPIBLEHL_00007 4902 7 Skin 0.21 protein_coding synonymous_variant LOW 825C>G Pro275Pro
M0031094 PPIBLEHL_00007 4919 9 Skin 0.27 protein_coding synonymous_variant LOW 808T>C Leu270Leu
M0031095 PPIBLEHL_00007 5067 5 Skin 0.15 protein_coding stop_gained HIGH 660G>A Trp220*
M0031096 PPIBLEHL_00007 5076 10 Skin 0.30 protein_coding synonymous_variant LOW 651T>C Ala217Ala
M0031097 PPIBLEHL_00007 5251 9 Skin 0.27 protein_coding missense_variant MODERATE 476C>T Pro159Leu
M0031098 PPIBLEHL_00007 5312 8 Skin 0.24 protein_coding missense_variant MODERATE 415A>G Lys139Glu
M0031099 PPIBLEHL_00007 5314 8 Skin 0.24 protein_coding missense_variant MODERATE 413A>T Asp138Val
M0031100 PPIBLEHL_00007 5324 8 Skin 0.24 protein_coding missense_variant MODERATE 403T>C Cys135Arg
M0031101 PPIBLEHL_00007 5334 8 Skin 0.24 protein_coding synonymous_variant LOW 393A>G Gly131Gly
M0031102 PPIBLEHL_00007 5592 4 Skin 0.12 protein_coding synonymous_variant LOW 135C>T Phe45Phe
M0031103 PPIBLEHL_00007 5623 4 Skin 0.12 protein_coding missense_variant MODERATE 104C>T Ala35Val
M0031104 PPIBLEHL_00007 5697 6 Skin 0.18 protein_coding synonymous_variant LOW 30G>C Pro10Pro
M0031105 PPIBLEHL_00007 5700 9 Skin 0.27 protein_coding synonymous_variant LOW 27A>G Lys9Lys
M0031106 PPIBLEHL_00002 5763 10 Skin 0.30 protein_coding upstream_gene_variant MODIFIER -4915C>G None
M0031107 PPIBLEHL_00008 5927 5 Skin 0.15 protein_coding synonymous_variant LOW 141G>C Ala47Ala
M0031108 PPIBLEHL_00008 6044 8 Skin 0.24 protein_coding synonymous_variant LOW 258C>G Val86Val
M0031109 PPIBLEHL_00008 6051 5 Skin 0.15 protein_coding missense_variant MODERATE 265C>G Leu89Val
M0031110 PPIBLEHL_00008 6167 5 Skin 0.15 protein_coding synonymous_variant LOW 381T>C Asn127Asn
M0031111 PPIBLEHL_00008 6280 8 Skin 0.24 protein_coding missense_variant MODERATE 494G>A Arg165His
M0031112 PPIBLEHL_00009 6508 11 Skin 0.33 protein_coding synonymous_variant LOW 216A>C Gly72Gly
M0031113 PPIBLEHL_00009 6615 3 Skin 0.09 protein_coding missense_variant MODERATE 323G>A Gly108Asp
M0031114 PPIBLEHL_00009 6617 3 Skin 0.09 protein_coding missense_variant MODERATE 325G>T Gly109Cys
M0031115 PPIBLEHL_00009 6940 11 Skin 0.33 protein_coding synonymous_variant LOW 648A>G Glu216Glu
M0031116 PPIBLEHL_00009 7103 9 Skin 0.27 protein_coding synonymous_variant LOW 811T>C Leu271Leu
M0031117 PPIBLEHL_00011 7666 12 Skin 0.36 protein_coding synonymous_variant LOW 261A>C Ile87Ile
M0031118 PPIBLEHL_00011 7756 10 Skin 0.30 protein_coding synonymous_variant LOW 171G>C Gly57Gly
M0031119 PPIBLEHL_00011 7799 13 Skin 0.39 protein_coding missense_variant MODERATE 128T>C Leu43Ser
M0031120 PPIBLEHL_00011 7858 12 Skin 0.36 protein_coding synonymous_variant LOW 69G>C Pro23Pro
M0031121 PPIBLEHL_00012 8063 8 Skin 0.24 protein_coding synonymous_variant LOW 708T>C Gly236Gly
M0031122 PPIBLEHL_00012 8072 7 Skin 0.21 protein_coding synonymous_variant LOW 699A>G Glu233Glu
M0031123 PPIBLEHL_00012 8075 7 Skin 0.21 protein_coding synonymous_variant LOW 696G>C Val232Val
M0031124 PPIBLEHL_00012 8150 12 Skin 0.36 protein_coding synonymous_variant LOW 621T>C Ala207Ala
M0031125 PPIBLEHL_00012 8234 4 Skin 0.12 protein_coding synonymous_variant LOW 537C>G Pro179Pro
M0031126 PPIBLEHL_00012 8525 6 Skin 0.18 protein_coding synonymous_variant LOW 246G>C Val82Val
M0031127 PPIBLEHL_00013 8857 3 Skin 0.09 protein_coding synonymous_variant LOW 168A>G Ala56Ala
M0031128 PPIBLEHL_00013 8896 6 Skin 0.18 protein_coding synonymous_variant LOW 129A>G Arg43Arg
M0031129 PPIBLEHL_00013 8938 3 Skin 0.09 protein_coding synonymous_variant LOW 87C>G Thr29Thr
M0031130 PPIBLEHL_00014 9246 4 Skin 0.12 protein_coding synonymous_variant LOW 210G>T Ala70Ala
M0031131 PPIBLEHL_00014 9247 4 Skin 0.12 protein_coding missense_variant MODERATE 209C>G Ala70Gly
M0031132 PPIBLEHL_00014 9248 4 Skin 0.12 protein_coding missense_variant MODERATE 208G>C Ala70Pro
M0031133 PPIBLEHL_00014 9249 4 Skin 0.12 protein_coding synonymous_variant LOW 207C>G Ala69Ala
M0031134 PPIBLEHL_00014 9255 4 Skin 0.12 protein_coding synonymous_variant LOW 201G>A Glu67Glu
M0031135 PPIBLEHL_00014 9261 4 Skin 0.12 protein_coding synonymous_variant LOW 195G>C Ala65Ala
M0031136 PPIBLEHL_00014 9291 5 Skin 0.15 protein_coding synonymous_variant LOW 165G>C Ala55Ala
M0031137 PPIBLEHL_00014 9296 5 Skin 0.15 protein_coding missense_variant MODERATE 160A>G Ile54Val
M0031138 PPIBLEHL_00016 10648 6 Skin 0.18 protein_coding synonymous_variant LOW 282C>T Asp94Asp
M0031139 PPIBLEHL_00016 10722 6 Skin 0.18 protein_coding missense_variant MODERATE 208A>G Asn70Asp
M0031140 PPIBLEHL_00017 10969 7 Skin 0.21 protein_coding missense_variant MODERATE 1169C>T Thr390Met
M0031141 PPIBLEHL_00017 11616 9 Skin 0.27 protein_coding synonymous_variant LOW 522G>C Pro174Pro
M0031142 PPIBLEHL_00017 11620 9 Skin 0.27 protein_coding missense_variant MODERATE 518G>A Gly173Glu
M0031143 PPIBLEHL_00011 12213 6 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4287G>A None
M0031144 PPIBLEHL_00018 12787 4 Skin 0.12 protein_coding synonymous_variant LOW 537A>G Pro179Pro
M0031145 PPIBLEHL_00018 12790 5 Skin 0.15 protein_coding synonymous_variant LOW 540G>A Gln180Gln
M0031146 PPIBLEHL_00019 13333 5 Skin 0.15 protein_coding missense_variant MODERATE 1711T>G Ser571Ala
M0031147 PPIBLEHL_00019 13504 4 Skin 0.12 protein_coding missense_variant MODERATE 1540A>C Thr514Pro
M0031148 PPIBLEHL_00019 13766 9 Skin 0.27 protein_coding synonymous_variant LOW 1278G>A Glu426Glu
M0031149 PPIBLEHL_00008 5948 5 Skin 0.15 protein_coding synonymous_variant LOW 162C>T Ala54Ala
M0031150 PPIBLEHL_00008 6246 7 Skin 0.21 protein_coding stop_gained HIGH 460C>T Gln154*
M0031151 PPIBLEHL_00010 7403 7 Skin 0.21 protein_coding missense_variant MODERATE 11C>G Thr4Arg
M0031152 PPIBLEHL_00011 7846 6 Skin 0.18 protein_coding synonymous_variant LOW 81T>C Asp27Asp
M0031153 PPIBLEHL_00018 12346 7 Skin 0.21 protein_coding synonymous_variant LOW 96T>C Gly32Gly
M0031154 PPIBLEHL_00003 1835 3 Skin 0.09 protein_coding synonymous_variant LOW 312T>C Asp104Asp
M0031155 PPIBLEHL_00003 2131 5 Skin 0.15 protein_coding missense_variant MODERATE 16G>T Val6Phe
M0031156 PPIBLEHL_00004 2255 4 Skin 0.12 protein_coding missense_variant MODERATE 1421A>G Asn474Ser
M0031157 PPIBLEHL_00004 2323 3 Skin 0.09 protein_coding synonymous_variant LOW 1353T>G Ala451Ala
M0031158 PPIBLEHL_00004 2515 4 Skin 0.12 protein_coding synonymous_variant LOW 1161C>T Tyr387Tyr
M0031159 PPIBLEHL_00004 2557 4 Skin 0.12 protein_coding synonymous_variant LOW 1119A>G Ala373Ala
M0031160 PPIBLEHL_00004 2637 4 Skin 0.12 protein_coding synonymous_variant LOW 1039T>C Leu347Leu
M0031161 PPIBLEHL_00004 3655 4 Skin 0.12 protein_coding synonymous_variant LOW 21T>C Ala7Ala
M0031162 PPIBLEHL_00004 3665 4 Skin 0.12 protein_coding missense_variant MODERATE 11T>C Val4Ala
M0031163 PPIBLEHL_00004 3667 4 Skin 0.12 protein_coding synonymous_variant LOW 9C>T Leu3Leu
M0031164 PPIBLEHL_00002 3689 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -2841A>G None
M0031165 PPIBLEHL_00002 3827 6 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -2979G>C None
M0031166 PPIBLEHL_00005 3889 3 Skin 0.09 protein_coding synonymous_variant LOW 27T>C Gly9Gly
M0031167 PPIBLEHL_00005 4201 3 Skin 0.09 protein_coding synonymous_variant LOW 339T>C Ala113Ala
M0031168 PPIBLEHL_00005 4212 4 Skin 0.12 protein_coding missense_variant MODERATE 350G>A Cys117Tyr
M0031169 PPIBLEHL_00005 4282 3 Skin 0.09 protein_coding synonymous_variant LOW 420G>C Pro140Pro
M0031170 PPIBLEHL_00022 17664 3 Skin 0.09 protein_coding synonymous_variant LOW 1050T>C His350His
M0031171 PPIBLEHL_00022 17778 3 Skin 0.09 protein_coding synonymous_variant LOW 1164A>C Pro388Pro
M0031172 PPIBLEHL_00023 17867 3 Skin 0.09 protein_coding synonymous_variant LOW 84T>C Asn28Asn
M0031173 PPIBLEHL_00023 17886 3 Skin 0.09 protein_coding synonymous_variant LOW 103A>C Arg35Arg
M0031174 PPIBLEHL_00023 17908 3 Skin 0.09 protein_coding missense_variant MODERATE 125T>C Leu42Pro
M0031175 PPIBLEHL_00023 17972 5 Skin 0.15 protein_coding missense_variant MODERATE 189C>A Asp63Glu
M0031176 PPIBLEHL_00023 18486 3 Skin 0.09 protein_coding missense_variant MODERATE 703C>G Gln235Glu
M0031177 PPIBLEHL_00023 18527 3 Skin 0.09 protein_coding synonymous_variant LOW 744C>T Tyr248Tyr
M0031178 PPIBLEHL_00024 18663 4 Skin 0.12 protein_coding synonymous_variant LOW 99A>G Ala33Ala
M0031179 PPIBLEHL_00024 18816 4 Skin 0.12 protein_coding synonymous_variant LOW 252C>T Arg84Arg
M0031180 PPIBLEHL_00024 18858 4 Skin 0.12 protein_coding synonymous_variant LOW 294C>T His98His
M0031181 PPIBLEHL_00024 18938 4 Skin 0.12 protein_coding missense_variant MODERATE 374C>A Thr125Lys
M0031182 PPIBLEHL_00025 18980 4 Skin 0.12 protein_coding synonymous_variant LOW 39T>C Arg13Arg
M0031183 PPIBLEHL_00025 19007 3 Skin 0.09 protein_coding synonymous_variant LOW 66T>C Asp22Asp
M0031184 PPIBLEHL_00025 19139 4 Skin 0.12 protein_coding synonymous_variant LOW 198T>C Tyr66Tyr
M0031185 PPIBLEHL_00025 19211 3 Skin 0.09 protein_coding synonymous_variant LOW 270T>G Pro90Pro
M0031186 PPIBLEHL_00025 19218 3 Skin 0.09 protein_coding missense_variant MODERATE 277G>A Asp93Asn
M0031187 PPIBLEHL_00025 19219 3 Skin 0.09 protein_coding missense_variant MODERATE 278A>G Asp93Gly
M0031188 PPIBLEHL_00029 23346 7 Skin 0.21 protein_coding synonymous_variant LOW 810T>C Ala270Ala
M0031189 PPIBLEHL_00031 24673 3 Skin 0.09 protein_coding synonymous_variant LOW 555C>T Ile185Ile
M0031190 PPIBLEHL_00031 24688 4 Skin 0.12 protein_coding synonymous_variant LOW 570T>C Gly190Gly
M0031191 PPIBLEHL_00031 24739 3 Skin 0.09 protein_coding synonymous_variant LOW 621G>C Pro207Pro
M0031192 PPIBLEHL_00031 24891 3 Skin 0.09 protein_coding missense_variant MODERATE 773G>T Gly258Val
M0031193 PPIBLEHL_00032 26101 3 Skin 0.09 protein_coding synonymous_variant LOW 645C>T Ile215Ile
M0031194 PPIBLEHL_00005 4114 3 Skin 0.09 protein_coding synonymous_variant LOW 252G>T Pro84Pro
M0031195 PPIBLEHL_00005 4185 3 Skin 0.09 protein_coding missense_variant MODERATE 323A>G Glu108Gly
M0031196 PPIBLEHL_00005 4321 3 Skin 0.09 protein_coding synonymous_variant LOW 459C>T Gly153Gly
M0031197 PPIBLEHL_00006 4480 4 Skin 0.12 protein_coding missense_variant MODERATE 20C>T Ala7Val
M0031198 PPIBLEHL_00005 4481 4 Skin 0.12 protein_coding missense_variant MODERATE 619C>T Leu207Phe
M0031199 PPIBLEHL_00007 4774 7 Skin 0.21 protein_coding missense_variant MODERATE 953G>A Gly318Glu
M0031200 PPIBLEHL_00007 4938 3 Skin 0.09 protein_coding synonymous_variant LOW 789T>C His263His
M0031201 PPIBLEHL_00007 5367 4 Skin 0.12 protein_coding synonymous_variant LOW 360T>C Ile120Ile
M0031202 PPIBLEHL_00002 5783 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4935T>C None
M0031203 PPIBLEHL_00008 6048 3 Skin 0.09 protein_coding missense_variant MODERATE 262C>A His88Asn
M0031204 PPIBLEHL_00009 6388 6 Skin 0.18 protein_coding synonymous_variant LOW 96C>T Gly32Gly
M0031205 PPIBLEHL_00009 6748 8 Skin 0.24 protein_coding synonymous_variant LOW 456C>G Leu152Leu
M0031206 PPIBLEHL_00009 6781 8 Skin 0.24 protein_coding synonymous_variant LOW 489G>C Val163Val
M0031207 PPIBLEHL_00009 6787 8 Skin 0.24 protein_coding synonymous_variant LOW 495C>T Tyr165Tyr
M0031208 PPIBLEHL_00009 6790 8 Skin 0.24 protein_coding synonymous_variant LOW 498C>G Ala166Ala
M0031209 PPIBLEHL_00009 6797 8 Skin 0.24 protein_coding missense_variant MODERATE 505T>G Ser169Ala
M0031210 PPIBLEHL_00009 6803 8 Skin 0.24 protein_coding missense_variant MODERATE 511C>G Gln171Glu
M0031211 PPIBLEHL_00009 6805 8 Skin 0.24 protein_coding synonymous_variant LOW 513G>A Gln171Gln
M0031212 PPIBLEHL_00009 6895 4 Skin 0.12 protein_coding synonymous_variant LOW 603T>G Leu201Leu
M0031213 PPIBLEHL_00017 11727 3 Skin 0.09 protein_coding synonymous_variant LOW 411C>T Ala137Ala
M0031214 PPIBLEHL_00017 11793 5 Skin 0.15 protein_coding synonymous_variant LOW 345C>T Tyr115Tyr
M0031215 PPIBLEHL_00017 11845 3 Skin 0.09 protein_coding missense_variant MODERATE 293A>G Lys98Arg
M0031216 PPIBLEHL_00017 12031 4 Skin 0.12 protein_coding missense_variant MODERATE 107T>C Leu36Ser
M0031217 PPIBLEHL_00011 12138 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4212A>G None
M0031218 PPIBLEHL_00018 12307 4 Skin 0.12 protein_coding synonymous_variant LOW 57C>T Asp19Asp
M0031219 PPIBLEHL_00018 12508 3 Skin 0.09 protein_coding synonymous_variant LOW 258T>A Arg86Arg
M0031220 PPIBLEHL_00018 12511 4 Skin 0.12 protein_coding synonymous_variant LOW 261C>G Pro87Pro
M0031221 PPIBLEHL_00018 12814 3 Skin 0.09 protein_coding synonymous_variant LOW 564G>T Leu188Leu
M0031222 PPIBLEHL_00019 13526 3 Skin 0.09 protein_coding synonymous_variant LOW 1518T>C Ile506Ile
M0031223 PPIBLEHL_00019 13631 3 Skin 0.09 protein_coding synonymous_variant LOW 1413T>C Ala471Ala
M0031224 PPIBLEHL_00019 13724 3 Skin 0.09 protein_coding synonymous_variant LOW 1320C>G Pro440Pro
M0031225 PPIBLEHL_00019 13793 3 Skin 0.09 protein_coding synonymous_variant LOW 1251T>C Thr417Thr
M0031226 PPIBLEHL_00019 13815 3 Skin 0.09 protein_coding missense_variant MODERATE 1229C>A Ala410Glu
M0031227 PPIBLEHL_00019 14024 4 Skin 0.12 protein_coding synonymous_variant LOW 1020T>C Asp340Asp
M0031228 PPIBLEHL_00019 14027 3 Skin 0.09 protein_coding synonymous_variant LOW 1017C>T Gly339Gly
M0031229 PPIBLEHL_00019 14036 3 Skin 0.09 protein_coding synonymous_variant LOW 1008C>T Phe336Phe
M0031230 PPIBLEHL_00019 14056 4 Skin 0.12 protein_coding missense_variant MODERATE 988A>G Asn330Asp
M0031231 PPIBLEHL_00019 14180 3 Skin 0.09 protein_coding synonymous_variant LOW 864C>A Leu288Leu
M0031232 PPIBLEHL_00019 14219 3 Skin 0.09 protein_coding synonymous_variant LOW 825T>C Gly275Gly
M0031233 PPIBLEHL_00019 14324 3 Skin 0.09 protein_coding synonymous_variant LOW 720A>G Arg240Arg
M0031234 PPIBLEHL_00019 14415 6 Skin 0.18 protein_coding missense_variant MODERATE 629A>G Gln210Arg
M0031235 PPIBLEHL_00019 14579 6 Skin 0.18 protein_coding synonymous_variant LOW 465A>C Pro155Pro
M0031236 PPIBLEHL_00019 14582 4 Skin 0.12 protein_coding synonymous_variant LOW 462T>C Ser154Ser
M0031237 PPIBLEHL_00019 14612 4 Skin 0.12 protein_coding synonymous_variant LOW 432T>C His144His
M0031238 PPIBLEHL_00019 14707 5 Skin 0.15 protein_coding missense_variant MODERATE 337G>A Asp113Asn
M0031239 PPIBLEHL_00019 14718 5 Skin 0.15 protein_coding missense_variant MODERATE 326G>A Gly109Asp
M0031240 PPIBLEHL_00019 14954 6 Skin 0.18 protein_coding synonymous_variant LOW 90T>C Pro30Pro
M0031241 PPIBLEHL_00020 15263 5 Skin 0.15 protein_coding synonymous_variant LOW 114A>T Pro38Pro
M0031242 PPIBLEHL_00020 15286 5 Skin 0.15 protein_coding missense_variant MODERATE 137A>C Lys46Thr
M0031243 PPIBLEHL_00020 15287 5 Skin 0.15 protein_coding synonymous_variant LOW 138A>G Lys46Lys
M0031244 PPIBLEHL_00020 15566 6 Skin 0.18 protein_coding synonymous_variant LOW 417T>G Ala139Ala
M0031245 PPIBLEHL_00020 15603 8 Skin 0.24 protein_coding missense_variant MODERATE 454T>G Ser152Ala
M0031246 PPIBLEHL_00020 15609 4 Skin 0.12 protein_coding missense_variant MODERATE 460C>G Pro154Ala
M0031247 PPIBLEHL_00020 15610 4 Skin 0.12 protein_coding missense_variant MODERATE 461C>T Pro154Leu
M0031248 PPIBLEHL_00021 15651 7 Skin 0.21 protein_coding missense_variant MODERATE 873G>C Glu291Asp
M0031249 PPIBLEHL_00021 15717 4 Skin 0.12 protein_coding synonymous_variant LOW 807A>G Arg269Arg
M0031250 PPIBLEHL_00021 15729 4 Skin 0.12 protein_coding synonymous_variant LOW 795G>C Thr265Thr
M0031251 PPIBLEHL_00021 15732 4 Skin 0.12 protein_coding missense_variant MODERATE 792G>T Glu264Asp
M0031252 PPIBLEHL_00021 15831 4 Skin 0.12 protein_coding synonymous_variant LOW 693T>C Gly231Gly
M0031253 PPIBLEHL_00021 15953 6 Skin 0.18 protein_coding missense_variant MODERATE 571G>A Asp191Asn
M0031254 PPIBLEHL_00021 16126 5 Skin 0.15 protein_coding missense_variant MODERATE 398G>A Gly133Glu
M0031255 PPIBLEHL_00021 16417 7 Skin 0.21 protein_coding missense_variant MODERATE 107C>T Thr36Ile
M0031256 PPIBLEHL_00021 16439 3 Skin 0.09 protein_coding synonymous_variant LOW 85T>C Leu29Leu
M0031257 PPIBLEHL_00021 16482 3 Skin 0.09 protein_coding synonymous_variant LOW 42G>T Val14Val
M0031258 PPIBLEHL_00021 16485 5 Skin 0.15 protein_coding synonymous_variant LOW 39T>C Phe13Phe
M0031259 PPIBLEHL_00021 16488 5 Skin 0.15 protein_coding synonymous_variant LOW 36A>C Ala12Ala
M0031260 PPIBLEHL_00017 16556 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4419G>A None
M0031261 PPIBLEHL_00022 16629 3 Skin 0.09 protein_coding synonymous_variant LOW 15T>C Ile5Ile
M0031262 PPIBLEHL_00022 16911 3 Skin 0.09 protein_coding synonymous_variant LOW 297T>C Tyr99Tyr
M0031263 PPIBLEHL_00022 16953 3 Skin 0.09 protein_coding synonymous_variant LOW 339G>A Glu113Glu
M0031264 PPIBLEHL_00022 16967 3 Skin 0.09 protein_coding missense_variant MODERATE 353A>C Gln118Pro
M0031265 PPIBLEHL_00022 17214 3 Skin 0.09 protein_coding synonymous_variant LOW 600C>T Tyr200Tyr
M0031266 PPIBLEHL_00022 17244 3 Skin 0.09 protein_coding synonymous_variant LOW 630C>T Cys210Cys
M0031267 PPIBLEHL_00022 17260 4 Skin 0.12 protein_coding missense_variant MODERATE 646C>A His216Asn
M0031268 PPIBLEHL_00022 17325 4 Skin 0.12 protein_coding synonymous_variant LOW 711T>C Ala237Ala
M0031269 PPIBLEHL_00022 17356 3 Skin 0.09 protein_coding missense_variant MODERATE 742G>T Ala248Ser
M0031270 PPIBLEHL_00026 20063 3 Skin 0.09 protein_coding missense_variant MODERATE 397T>C Ser133Pro
M0031271 PPIBLEHL_00027 20396 4 Skin 0.12 protein_coding synonymous_variant LOW 24C>G Ser8Ser
M0031272 PPIBLEHL_00028 22279 3 Skin 0.09 protein_coding synonymous_variant LOW 1056T>C Pro352Pro
M0031273 PPIBLEHL_00030 23645 4 Skin 0.12 protein_coding synonymous_variant LOW 60A>G Leu20Leu
M0031274 PPIBLEHL_00032 25654 3 Skin 0.09 protein_coding synonymous_variant LOW 198C>T Tyr66Tyr
M0031275 PPIBLEHL_00032 25657 3 Skin 0.09 protein_coding synonymous_variant LOW 201C>G Arg67Arg
M0031276 PPIBLEHL_00032 25666 3 Skin 0.09 protein_coding synonymous_variant LOW 210G>C Pro70Pro
M0031277 PPIBLEHL_00032 25709 3 Skin 0.09 protein_coding missense_variant MODERATE 253G>A Val85Ile
M0031278 PPIBLEHL_00033 26682 3 Skin 0.09 protein_coding missense_variant MODERATE 767A>G Asp256Gly
M0031279 PPIBLEHL_00014 9080 6 Skin 0.18 protein_coding missense_variant MODERATE 376A>G Arg126Gly
M0031280 PPIBLEHL_00014 9105 7 Skin 0.21 protein_coding synonymous_variant LOW 351A>G Pro117Pro
M0031281 PPIBLEHL_00014 9119 7 Skin 0.21 protein_coding missense_variant MODERATE 337C>G Pro113Ala
M0031282 PPIBLEHL_00014 9161 3 Skin 0.09 protein_coding missense_variant MODERATE 295G>T Ala99Ser
M0031283 PPIBLEHL_00014 9184 4 Skin 0.12 protein_coding missense_variant MODERATE 272C>A Thr91Lys
M0031284 PPIBLEHL_00014 9185 4 Skin 0.12 protein_coding missense_variant MODERATE 271A>G Thr91Ala
M0031285 PPIBLEHL_00020 15459 6 Skin 0.18 protein_coding missense_variant MODERATE 310A>G Thr104Ala
M0031286 PPIBLEHL_00020 15473 6 Skin 0.18 protein_coding synonymous_variant LOW 324G>A Arg108Arg
M0031287 PPIBLEHL_00021 15918 3 Skin 0.09 protein_coding synonymous_variant LOW 606C>G Ala202Ala
M0031288 PPIBLEHL_00021 15924 3 Skin 0.09 protein_coding synonymous_variant LOW 600G>C Val200Val
M0031289 PPIBLEHL_00021 15960 3 Skin 0.09 protein_coding synonymous_variant LOW 564G>T Arg188Arg
M0031290 PPIBLEHL_00021 15962 3 Skin 0.09 protein_coding missense_variant MODERATE 562C>G Arg188Gly
M0031291 PPIBLEHL_00021 15963 3 Skin 0.09 protein_coding synonymous_variant LOW 561G>C Arg187Arg
M0031292 PPIBLEHL_00021 15975 3 Skin 0.09 protein_coding synonymous_variant LOW 549T>C Asp183Asp
M0031293 PPIBLEHL_00021 15978 3 Skin 0.09 protein_coding missense_variant MODERATE 546G>C Met182Ile
M0031294 PPIBLEHL_00021 15979 3 Skin 0.09 protein_coding missense_variant MODERATE 545T>C Met182Thr
M0031295 PPIBLEHL_00021 15980 3 Skin 0.09 protein_coding missense_variant MODERATE 544A>G Met182Val
M0031296 PPIBLEHL_00021 16298 4 Skin 0.12 protein_coding synonymous_variant LOW 226T>C Leu76Leu
M0031297 PPIBLEHL_00014 9403 5 Skin 0.15 protein_coding missense_variant MODERATE 53A>C His18Pro
M0031298 PPIBLEHL_00015 10223 3 Skin 0.09 protein_coding synonymous_variant LOW 387G>A Ala129Ala
M0031299 PPIBLEHL_00015 10414 4 Skin 0.12 protein_coding missense_variant MODERATE 196C>T Leu66Phe
M0031300 PPIBLEHL_00008 6139 7 Skin 0.21 protein_coding missense_variant MODERATE 353T>A Met118Lys
M0031301 PPIBLEHL_00009 6445 9 Skin 0.27 protein_coding synonymous_variant LOW 153G>A Ser51Ser
M0031302 PPIBLEHL_00010 7472 4 Skin 0.12 protein_coding missense_variant MODERATE 80G>A Arg27Lys
M0031303 PPIBLEHL_00012 7950 7 Skin 0.21 protein_coding missense_variant MODERATE 821A>G Tyr274Cys
M0031304 PPIBLEHL_00012 8381 6 Skin 0.18 protein_coding synonymous_variant LOW 390C>G Pro130Pro
M0031305 PPIBLEHL_00012 8575 6 Skin 0.18 protein_coding missense_variant MODERATE 196C>G His66Asp
M0031306 PPIBLEHL_00012 8582 5 Skin 0.15 protein_coding synonymous_variant LOW 189C>T Phe63Phe
M0031307 PPIBLEHL_00012 8591 4 Skin 0.12 protein_coding synonymous_variant LOW 180G>C Gly60Gly
M0031308 PPIBLEHL_00012 8614 6 Skin 0.18 protein_coding missense_variant MODERATE 157T>G Leu53Val
M0031309 PPIBLEHL_00012 8628 6 Skin 0.18 protein_coding missense_variant MODERATE 143G>A Arg48Lys
M0031310 PPIBLEHL_00012 8636 6 Skin 0.18 protein_coding synonymous_variant LOW 135G>C Arg45Arg
M0031311 PPIBLEHL_00012 8648 5 Skin 0.15 protein_coding synonymous_variant LOW 123A>G Gln41Gln
M0031312 PPIBLEHL_00029 22878 4 Skin 0.12 protein_coding synonymous_variant LOW 342G>C Gly114Gly
M0031313 PPIBLEHL_00029 22883 4 Skin 0.12 protein_coding missense_variant MODERATE 347T>C Leu116Ser
M0031314 PPIBLEHL_00029 22980 5 Skin 0.15 protein_coding synonymous_variant LOW 444T>A Ala148Ala
M0031315 PPIBLEHL_00005 4444 4 Skin 0.12 protein_coding synonymous_variant LOW 582G>C Ala194Ala
M0031316 PPIBLEHL_00007 4848 3 Skin 0.09 protein_coding synonymous_variant LOW 879G>C Arg293Arg
M0031317 PPIBLEHL_00007 5541 3 Skin 0.09 protein_coding synonymous_variant LOW 186G>C Ser62Ser
M0031318 PPIBLEHL_00007 9029 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3303A>T None
M0031319 PPIBLEHL_00015 10034 3 Skin 0.09 protein_coding synonymous_variant LOW 576T>C Arg192Arg
M0031320 PPIBLEHL_00017 11385 5 Skin 0.15 protein_coding synonymous_variant LOW 753T>C Asp251Asp
M0031321 PPIBLEHL_00017 11457 3 Skin 0.09 protein_coding synonymous_variant LOW 681G>C Ala227Ala
M0031322 PPIBLEHL_00019 15017 5 Skin 0.15 protein_coding synonymous_variant LOW 27A>C Arg9Arg
M0031323 PPIBLEHL_00015 15056 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4447C>G None
M0031324 PPIBLEHL_00015 15069 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4460C>A None
M0031325 PPIBLEHL_00015 15082 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4473T>C None
M0031326 PPIBLEHL_00015 15087 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4478T>C None
M0031327 PPIBLEHL_00015 15101 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4492T>C None
M0031328 PPIBLEHL_00015 15128 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4519T>C None
M0031329 PPIBLEHL_00020 15179 4 Skin 0.12 protein_coding synonymous_variant LOW 30G>C Pro10Pro
M0031330 PPIBLEHL_00025 19262 3 Skin 0.09 protein_coding synonymous_variant LOW 321C>T Tyr107Tyr
M0031331 PPIBLEHL_00027 20762 3 Skin 0.09 protein_coding synonymous_variant LOW 390A>G Pro130Pro
M0031332 PPIBLEHL_00027 20831 3 Skin 0.09 protein_coding synonymous_variant LOW 459T>C Asp153Asp
M0031333 PPIBLEHL_00027 20868 3 Skin 0.09 protein_coding missense_variant MODERATE 496A>G Asn166Asp
M0031334 PPIBLEHL_00027 20903 3 Skin 0.09 protein_coding synonymous_variant LOW 531T>C Phe177Phe
M0031335 PPIBLEHL_00027 20945 3 Skin 0.09 protein_coding synonymous_variant LOW 573A>G Val191Val
M0031336 PPIBLEHL_00027 20987 3 Skin 0.09 protein_coding missense_variant MODERATE 615C>G Asp205Glu
M0031337 PPIBLEHL_00028 21304 3 Skin 0.09 protein_coding synonymous_variant LOW 81T>C Leu27Leu
M0031338 PPIBLEHL_00028 21712 3 Skin 0.09 protein_coding synonymous_variant LOW 489C>G Thr163Thr
M0031339 PPIBLEHL_00029 23196 3 Skin 0.09 protein_coding missense_variant MODERATE 660C>A Asp220Glu
M0031340 PPIBLEHL_00015 15131 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4522T>G None
M0031341 PPIBLEHL_00009 6580 3 Skin 0.09 protein_coding synonymous_variant LOW 288C>G Arg96Arg
M0031342 PPIBLEHL_00009 6593 3 Skin 0.09 protein_coding missense_variant MODERATE 301A>G Ile101Val
M0031343 PPIBLEHL_00009 7270 3 Skin 0.09 protein_coding synonymous_variant LOW 978T>C Ile326Ile
M0031344 PPIBLEHL_00011 7674 3 Skin 0.09 protein_coding missense_variant MODERATE 253G>A Val85Ile
M0031345 PPIBLEHL_00009 7230 3 Skin 0.09 protein_coding missense_variant MODERATE 938G>C Gly313Ala
M0031346 PPIBLEHL_00009 7259 3 Skin 0.09 protein_coding synonymous_variant LOW 967T>C Leu323Leu
M0031347 PPIBLEHL_00011 7607 3 Skin 0.09 protein_coding missense_variant MODERATE 320T>C Val107Ala
M0031348 PPIBLEHL_00012 7979 3 Skin 0.09 protein_coding missense_variant MODERATE 792C>G His264Gln
M0031349 PPIBLEHL_00012 8090 3 Skin 0.09 protein_coding synonymous_variant LOW 681C>T Ser227Ser
M0031350 PPIBLEHL_00012 8119 3 Skin 0.09 protein_coding missense_variant MODERATE 652C>G Pro218Ala
M0031351 PPIBLEHL_00012 8165 3 Skin 0.09 protein_coding synonymous_variant LOW 606G>A Gly202Gly
M0031352 PPIBLEHL_00012 8264 3 Skin 0.09 protein_coding synonymous_variant LOW 507G>C Val169Val
M0031353 PPIBLEHL_00017 11748 3 Skin 0.09 protein_coding synonymous_variant LOW 390G>A Glu130Glu
M0031354 PPIBLEHL_00015 15099 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4490G>C None
M0031355 PPIBLEHL_00015 15111 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4502A>G None
M0031356 PPIBLEHL_00002 3822 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -2974C>T None
M0031357 PPIBLEHL_00004 3592 3 Skin 0.09 protein_coding synonymous_variant LOW 84C>T Leu28Leu
M0031358 PPIBLEHL_00005 4438 3 Skin 0.09 protein_coding synonymous_variant LOW 576T>C Arg192Arg
M0031359 PPIBLEHL_00005 4441 3 Skin 0.09 protein_coding synonymous_variant LOW 579G>T Arg193Arg
M0031360 PPIBLEHL_00007 4762 4 Skin 0.12 protein_coding missense_variant MODERATE 965C>A Thr322Lys
M0031361 PPIBLEHL_00009 7003 3 Skin 0.09 protein_coding synonymous_variant LOW 711C>A Gly237Gly
M0031362 PPIBLEHL_00013 8990 4 Skin 0.12 protein_coding missense_variant MODERATE 35T>A Phe12Tyr
M0031363 PPIBLEHL_00022 17370 3 Skin 0.09 protein_coding missense_variant MODERATE 756G>C Glu252Asp
M0031364 PPIBLEHL_00026 19692 3 Skin 0.09 protein_coding missense_variant MODERATE 26T>C Val9Ala
M0031365 PPIBLEHL_00026 19824 4 Skin 0.12 protein_coding missense_variant MODERATE 158G>A Arg53Lys
M0031366 PPIBLEHL_00026 19915 3 Skin 0.09 protein_coding synonymous_variant LOW 249G>C Ala83Ala
M0031367 PPIBLEHL_00026 19961 3 Skin 0.09 protein_coding missense_variant MODERATE 295A>G Lys99Glu
M0031368 PPIBLEHL_00004 2380 3 Skin 0.09 protein_coding synonymous_variant LOW 1296T>C Thr432Thr
M0031369 PPIBLEHL_00006 4653 3 Skin 0.09 protein_coding missense_variant MODERATE 193G>C Glu65Gln






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term