Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2270
  Reference Plasmid   1111525849758776_bin.22__k141_157866
  Reference Plasmid Size   30807
  Reference Plasmid GC Content   0.63
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0032079 PLBDCLGH_00012 11691 4 Skin 0.10 protein_coding missense_variant MODERATE 441C>A His147Gln
M0032080 PLBDCLGH_00013 11891 4 Skin 0.10 protein_coding synonymous_variant LOW 15A>G Val5Val
M0032081 PLBDCLGH_00013 12008 4 Skin 0.10 protein_coding missense_variant MODERATE 132G>C Glu44Asp
M0032082 PLBDCLGH_00013 12027 4 Skin 0.10 protein_coding missense_variant MODERATE 151C>A Leu51Met
M0032083 PLBDCLGH_00014 12306 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -29G>A None
M0032084 PLBDCLGH_00014 12323 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -12C>G None
M0032085 PLBDCLGH_00014 12401 6 Skin 0.15 protein_coding synonymous_variant LOW 67T>C Leu23Leu
M0032086 PLBDCLGH_00014 13093 7 Skin 0.18 protein_coding synonymous_variant LOW 759A>G Pro253Pro
M0032087 PLBDCLGH_00012 11186 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -65G>T None
M0032088 PLBDCLGH_00012 11204 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -47C>A None
M0032089 PLBDCLGH_00012 11431 3 Skin 0.08 protein_coding missense_variant MODERATE 181G>A Gly61Ser
M0032090 PLBDCLGH_00017 14376 7 Skin 0.18 protein_coding missense_variant MODERATE 28A>G Met10Val
M0032091 PLBDCLGH_00003 28 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1018G>A None
M0032092 PLBDCLGH_00002 286 5 Skin 0.13 protein_coding stop_gained HIGH 661A>T Lys221*
M0032093 PLBDCLGH_00002 392 8 Skin 0.21 protein_coding synonymous_variant LOW 555G>A Ala185Ala
M0032094 PLBDCLGH_00002 539 8 Skin 0.21 protein_coding synonymous_variant LOW 408A>C Arg136Arg
M0032095 PLBDCLGH_00002 656 8 Skin 0.21 protein_coding synonymous_variant LOW 291A>C Arg97Arg
M0032096 PLBDCLGH_00002 735 7 Skin 0.18 protein_coding missense_variant MODERATE 212C>G Thr71Ser
M0032097 PLBDCLGH_00002 872 4 Skin 0.10 protein_coding synonymous_variant LOW 75C>T Asp25Asp
M0032098 PLBDCLGH_00001 981 9 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -733A>G None
M0032099 PLBDCLGH_00001 992 9 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -744T>C None
M0032100 PLBDCLGH_00003 1497 7 Skin 0.18 protein_coding missense_variant MODERATE 452T>C Val151Ala
M0032101 PLBDCLGH_00003 1516 4 Skin 0.10 protein_coding synonymous_variant LOW 471A>G Glu157Glu
M0032102 PLBDCLGH_00003 1519 4 Skin 0.10 protein_coding synonymous_variant LOW 474T>C Thr158Thr
M0032103 PLBDCLGH_00003 1520 4 Skin 0.10 protein_coding missense_variant MODERATE 475T>A Ser159Thr
M0032104 PLBDCLGH_00003 1525 5 Skin 0.13 protein_coding synonymous_variant LOW 480T>C Asp160Asp
M0032105 PLBDCLGH_00003 1537 5 Skin 0.13 protein_coding synonymous_variant LOW 492A>G Lys164Lys
M0032106 PLBDCLGH_00003 1540 7 Skin 0.18 protein_coding synonymous_variant LOW 495T>G Leu165Leu
M0032107 PLBDCLGH_00004 3442 7 Skin 0.18 protein_coding synonymous_variant LOW 1389T>C Arg463Arg
M0032108 PLBDCLGH_00001 3593 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3345T>C None
M0032109 PLBDCLGH_00001 3807 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3559A>G None
M0032110 PLBDCLGH_00001 4008 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3760T>C None
M0032111 PLBDCLGH_00001 4096 9 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -3848A>G None
M0032112 PLBDCLGH_00005 4142 5 Skin 0.13 protein_coding missense_variant MODERATE 1110T>G His370Gln
M0032113 PLBDCLGH_00005 4295 6 Skin 0.15 protein_coding synonymous_variant LOW 957G>A Gln319Gln
M0032114 PLBDCLGH_00005 4751 4 Skin 0.10 protein_coding synonymous_variant LOW 501C>G Leu167Leu
M0032115 PLBDCLGH_00005 4784 9 Skin 0.23 protein_coding synonymous_variant LOW 468A>G Ala156Ala
M0032116 PLBDCLGH_00005 5034 8 Skin 0.21 protein_coding missense_variant MODERATE 218T>C Leu73Pro
M0032117 PLBDCLGH_00005 5075 4 Skin 0.10 protein_coding synonymous_variant LOW 177C>T Ser59Ser
M0032118 PLBDCLGH_00005 5133 8 Skin 0.21 protein_coding missense_variant MODERATE 119G>A Arg40Gln
M0032119 PLBDCLGH_00005 5250 6 Skin 0.15 protein_coding start_lost HIGH 2T>G Met1?
M0032120 PLBDCLGH_00006 5470 7 Skin 0.18 protein_coding missense_variant MODERATE 131T>C Ile44Thr
M0032121 PLBDCLGH_00006 5496 7 Skin 0.18 protein_coding missense_variant MODERATE 157T>G Ser53Ala
M0032122 PLBDCLGH_00006 6013 7 Skin 0.18 protein_coding missense_variant MODERATE 674C>T Thr225Ile
M0032123 PLBDCLGH_00007 6258 8 Skin 0.21 protein_coding missense_variant MODERATE 112C>G Leu38Val
M0032124 PLBDCLGH_00007 6260 4 Skin 0.10 protein_coding synonymous_variant LOW 114C>G Leu38Leu
M0032125 PLBDCLGH_00007 6261 8 Skin 0.21 protein_coding missense_variant MODERATE 115G>A Gly39Ser
M0032126 PLBDCLGH_00007 6518 7 Skin 0.18 protein_coding synonymous_variant LOW 372A>C Ala124Ala
M0032127 PLBDCLGH_00007 6944 6 Skin 0.15 protein_coding synonymous_variant LOW 798C>T Val266Val
M0032128 PLBDCLGH_00007 6953 9 Skin 0.23 protein_coding synonymous_variant LOW 807A>G Glu269Glu
M0032129 PLBDCLGH_00007 7007 3 Skin 0.08 protein_coding synonymous_variant LOW 861G>C Ala287Ala
M0032130 PLBDCLGH_00007 7019 9 Skin 0.23 protein_coding synonymous_variant LOW 873T>G Val291Val
M0032131 PLBDCLGH_00007 7022 9 Skin 0.23 protein_coding synonymous_variant LOW 876T>G Val292Val
M0032132 PLBDCLGH_00007 7256 7 Skin 0.18 protein_coding synonymous_variant LOW 1110G>A Glu370Glu
M0032133 PLBDCLGH_00007 7292 5 Skin 0.13 protein_coding synonymous_variant LOW 1146G>T Val382Val
M0032134 PLBDCLGH_00007 7295 7 Skin 0.18 protein_coding synonymous_variant LOW 1149G>C Arg383Arg
M0032135 PLBDCLGH_00007 7355 8 Skin 0.21 protein_coding synonymous_variant LOW 1209G>C Gly403Gly
M0032136 PLBDCLGH_00007 7538 8 Skin 0.21 protein_coding synonymous_variant LOW 1392A>C Thr464Thr
M0032137 PLBDCLGH_00007 7541 6 Skin 0.15 protein_coding synonymous_variant LOW 1395G>C Pro465Pro
M0032138 PLBDCLGH_00008 7755 6 Skin 0.15 protein_coding missense_variant MODERATE 83T>C Val28Ala
M0032139 PLBDCLGH_00008 7974 6 Skin 0.15 protein_coding missense_variant MODERATE 302A>G Glu101Gly
M0032140 PLBDCLGH_00008 7978 3 Skin 0.08 protein_coding missense_variant MODERATE 306C>G Asp102Glu
M0032141 PLBDCLGH_00008 8122 7 Skin 0.18 protein_coding synonymous_variant LOW 450G>A Pro150Pro
M0032142 PLBDCLGH_00009 8289 7 Skin 0.18 protein_coding synonymous_variant LOW 27C>T Gly9Gly
M0032143 PLBDCLGH_00009 8295 7 Skin 0.18 protein_coding synonymous_variant LOW 33C>T Val11Val
M0032144 PLBDCLGH_00009 8427 3 Skin 0.08 protein_coding synonymous_variant LOW 165A>G Thr55Thr
M0032145 PLBDCLGH_00009 8439 5 Skin 0.13 protein_coding synonymous_variant LOW 177T>C Cys59Cys
M0032146 PLBDCLGH_00009 8442 4 Skin 0.10 protein_coding synonymous_variant LOW 180G>A Lys60Lys
M0032147 PLBDCLGH_00009 8445 4 Skin 0.10 protein_coding synonymous_variant LOW 183C>G Ser61Ser
M0032148 PLBDCLGH_00009 8481 7 Skin 0.18 protein_coding synonymous_variant LOW 219A>G Glu73Glu
M0032149 PLBDCLGH_00009 8482 7 Skin 0.18 protein_coding synonymous_variant LOW 220C>T Leu74Leu
M0032150 PLBDCLGH_00009 8503 5 Skin 0.13 protein_coding missense_variant MODERATE 241C>G Gln81Glu
M0032151 PLBDCLGH_00009 8625 6 Skin 0.15 protein_coding synonymous_variant LOW 363A>G Ala121Ala
M0032152 PLBDCLGH_00009 8782 8 Skin 0.21 protein_coding synonymous_variant LOW 520T>C Leu174Leu
M0032153 PLBDCLGH_00009 8820 6 Skin 0.15 protein_coding synonymous_variant LOW 558G>C Ser186Ser
M0032154 PLBDCLGH_00009 8823 6 Skin 0.15 protein_coding synonymous_variant LOW 561A>G Glu187Glu
M0032155 PLBDCLGH_00009 8961 7 Skin 0.18 protein_coding synonymous_variant LOW 699T>C Asn233Asn
M0032156 PLBDCLGH_00009 9141 6 Skin 0.15 protein_coding synonymous_variant LOW 879T>C Arg293Arg
M0032157 PLBDCLGH_00009 9225 5 Skin 0.13 protein_coding synonymous_variant LOW 963G>T Val321Val
M0032158 PLBDCLGH_00009 9288 6 Skin 0.15 protein_coding synonymous_variant LOW 1026T>C Ile342Ile
M0032159 PLBDCLGH_00009 9579 5 Skin 0.13 protein_coding synonymous_variant LOW 1317T>C Ala439Ala
M0032160 PLBDCLGH_00009 9609 5 Skin 0.13 protein_coding synonymous_variant LOW 1347G>A Lys449Lys
M0032161 PLBDCLGH_00011 10448 3 Skin 0.08 protein_coding synonymous_variant LOW 246C>T Gly82Gly
M0032162 PLBDCLGH_00011 10856 3 Skin 0.08 protein_coding synonymous_variant LOW 654G>A Arg218Arg
M0032163 PLBDCLGH_00001 173 3 Skin 0.08 protein_coding missense_variant MODERATE 76C>G Gln26Glu
M0032164 PLBDCLGH_00002 470 3 Skin 0.08 protein_coding synonymous_variant LOW 477C>T Ile159Ile
M0032165 PLBDCLGH_00002 802 3 Skin 0.08 protein_coding missense_variant MODERATE 145G>C Glu49Gln
M0032166 PLBDCLGH_00001 999 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -751A>G None
M0032167 PLBDCLGH_00001 1013 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -765A>T None
M0032168 PLBDCLGH_00001 1016 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -768A>G None
M0032169 PLBDCLGH_00003 1312 6 Skin 0.15 protein_coding synonymous_variant LOW 267A>G Gly89Gly
M0032170 PLBDCLGH_00003 1317 6 Skin 0.15 protein_coding missense_variant MODERATE 272T>C Val91Ala
M0032171 PLBDCLGH_00003 1318 7 Skin 0.18 protein_coding synonymous_variant LOW 273G>C Val91Val
M0032172 PLBDCLGH_00003 1321 7 Skin 0.18 protein_coding synonymous_variant LOW 276G>C Val92Val
M0032173 PLBDCLGH_00003 1813 4 Skin 0.10 protein_coding missense_variant MODERATE 768G>C Arg256Ser
M0032174 PLBDCLGH_00004 2209 3 Skin 0.08 protein_coding synonymous_variant LOW 156C>T Ala52Ala
M0032175 PLBDCLGH_00004 2293 6 Skin 0.15 protein_coding synonymous_variant LOW 240A>G Ala80Ala
M0032176 PLBDCLGH_00004 2695 3 Skin 0.08 protein_coding synonymous_variant LOW 642G>A Glu214Glu
M0032177 PLBDCLGH_00004 2698 5 Skin 0.13 protein_coding synonymous_variant LOW 645G>A Glu215Glu
M0032178 PLBDCLGH_00004 2707 5 Skin 0.13 protein_coding synonymous_variant LOW 654A>T Ala218Ala
M0032179 PLBDCLGH_00004 2833 8 Skin 0.21 protein_coding synonymous_variant LOW 780A>G Leu260Leu
M0032180 PLBDCLGH_00004 2971 5 Skin 0.13 protein_coding synonymous_variant LOW 918A>C Ala306Ala
M0032181 PLBDCLGH_00004 3163 8 Skin 0.21 protein_coding synonymous_variant LOW 1110T>C Ala370Ala
M0032182 PLBDCLGH_00018 15471 7 Skin 0.18 protein_coding missense_variant MODERATE 688G>A Gly230Ser
M0032183 PLBDCLGH_00018 15682 9 Skin 0.23 protein_coding synonymous_variant LOW 477T>C Arg159Arg
M0032184 PLBDCLGH_00018 16126 3 Skin 0.08 protein_coding synonymous_variant LOW 33A>G Arg11Arg
M0032185 PLBDCLGH_00019 16413 6 Skin 0.15 protein_coding synonymous_variant LOW 510T>C Asp170Asp
M0032186 PLBDCLGH_00018 16961 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -803T>C None
M0032187 PLBDCLGH_00018 16980 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -822A>G None
M0032188 PLBDCLGH_00018 17006 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -848A>G None
M0032189 PLBDCLGH_00018 17018 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -860C>T None
M0032190 PLBDCLGH_00018 17109 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -951T>C None
M0032191 PLBDCLGH_00018 17126 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -968T>C None
M0032192 PLBDCLGH_00017 14675 7 Skin 0.18 protein_coding synonymous_variant LOW 327T>C Ser109Ser
M0032193 PLBDCLGH_00017 14768 3 Skin 0.08 protein_coding synonymous_variant LOW 420T>C Arg140Arg
M0032194 PLBDCLGH_00018 15397 3 Skin 0.08 protein_coding synonymous_variant LOW 762G>A Ala254Ala
M0032195 PLBDCLGH_00018 15781 8 Skin 0.21 protein_coding synonymous_variant LOW 378A>G Leu126Leu
M0032196 PLBDCLGH_00018 15787 7 Skin 0.18 protein_coding synonymous_variant LOW 372A>G Glu124Glu
M0032197 PLBDCLGH_00027 24259 3 Skin 0.08 protein_coding synonymous_variant LOW 588C>T His196His
M0032198 PLBDCLGH_00027 24844 4 Skin 0.10 protein_coding synonymous_variant LOW 1173T>C His391His
M0032199 PLBDCLGH_00027 24847 3 Skin 0.08 protein_coding synonymous_variant LOW 1176C>T Ala392Ala
M0032200 PLBDCLGH_00027 25374 3 Skin 0.08 protein_coding missense_variant MODERATE 1703A>G His568Arg
M0032201 PLBDCLGH_00023 25653 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4746C>T None
M0032202 PLBDCLGH_00023 25693 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4786G>A None
M0032203 PLBDCLGH_00028 25848 3 Skin 0.08 protein_coding synonymous_variant LOW 111T>C Gly37Gly
M0032204 PLBDCLGH_00028 26073 5 Skin 0.13 protein_coding synonymous_variant LOW 336T>C Thr112Thr
M0032205 PLBDCLGH_00028 26200 6 Skin 0.15 protein_coding synonymous_variant LOW 463T>C Leu155Leu
M0032206 PLBDCLGH_00029 27220 7 Skin 0.18 protein_coding synonymous_variant LOW 783C>T Ala261Ala
M0032207 PLBDCLGH_00029 27481 3 Skin 0.08 protein_coding synonymous_variant LOW 1044C>T Gly348Gly
M0032208 PLBDCLGH_00028 26343 5 Skin 0.13 protein_coding synonymous_variant LOW 606G>A Ala202Ala
M0032209 PLBDCLGH_00030 28384 7 Skin 0.18 protein_coding synonymous_variant LOW 684T>C Ala228Ala
M0032210 PLBDCLGH_00030 28423 5 Skin 0.13 protein_coding synonymous_variant LOW 723G>A Ser241Ser
M0032211 PLBDCLGH_00030 28447 5 Skin 0.13 protein_coding synonymous_variant LOW 747C>T Ala249Ala
M0032212 PLBDCLGH_00031 29180 4 Skin 0.10 protein_coding synonymous_variant LOW 189T>C Asn63Asn
M0032213 PLBDCLGH_00031 29243 7 Skin 0.18 protein_coding synonymous_variant LOW 252T>C Ile84Ile
M0032214 PLBDCLGH_00031 29451 3 Skin 0.08 protein_coding synonymous_variant LOW 460C>T Leu154Leu
M0032215 PLBDCLGH_00031 29555 6 Skin 0.15 protein_coding synonymous_variant LOW 564C>G Val188Val
M0032216 PLBDCLGH_00031 29660 7 Skin 0.18 protein_coding synonymous_variant LOW 669T>C Gly223Gly
M0032217 PLBDCLGH_00032 30095 8 Skin 0.21 protein_coding missense_variant MODERATE 216A>C Gln72His
M0032218 PLBDCLGH_00016 13577 6 Skin 0.15 protein_coding missense_variant MODERATE 32T>C Val11Ala
M0032219 PLBDCLGH_00016 14282 5 Skin 0.13 protein_coding missense_variant MODERATE 737T>C Val246Ala
M0032220 PLBDCLGH_00017 14534 5 Skin 0.13 protein_coding synonymous_variant LOW 186T>G Thr62Thr
M0032221 PLBDCLGH_00017 15056 5 Skin 0.13 protein_coding synonymous_variant LOW 708C>G Gly236Gly
M0032222 PLBDCLGH_00018 15784 5 Skin 0.13 protein_coding synonymous_variant LOW 375C>T Asp125Asp
M0032223 PLBDCLGH_00022 19077 4 Skin 0.10 protein_coding synonymous_variant LOW 198C>T Thr66Thr
M0032224 PLBDCLGH_00022 19104 5 Skin 0.13 protein_coding synonymous_variant LOW 225G>C Leu75Leu
M0032225 PLBDCLGH_00022 19275 5 Skin 0.13 protein_coding synonymous_variant LOW 396A>G Val132Val
M0032226 PLBDCLGH_00022 19291 4 Skin 0.10 protein_coding missense_variant MODERATE 412A>C Met138Leu
M0032227 PLBDCLGH_00022 19311 6 Skin 0.15 protein_coding synonymous_variant LOW 432A>C Ser144Ser
M0032228 PLBDCLGH_00022 19321 5 Skin 0.13 protein_coding missense_variant MODERATE 442C>A Pro148Thr
M0032229 PLBDCLGH_00022 19368 6 Skin 0.15 protein_coding missense_variant MODERATE 489G>T Glu163Asp
M0032230 PLBDCLGH_00022 19571 7 Skin 0.18 protein_coding missense_variant MODERATE 692G>A Gly231Glu
M0032231 PLBDCLGH_00022 19572 4 Skin 0.10 protein_coding synonymous_variant LOW 693G>T Gly231Gly
M0032232 PLBDCLGH_00022 19599 5 Skin 0.13 protein_coding synonymous_variant LOW 720A>G Glu240Glu
M0032233 PLBDCLGH_00022 19934 5 Skin 0.13 protein_coding missense_variant MODERATE 1055G>A Arg352Lys
M0032234 PLBDCLGH_00022 19989 8 Skin 0.21 protein_coding synonymous_variant LOW 1110G>C Gly370Gly
M0032235 PLBDCLGH_00022 19995 3 Skin 0.08 protein_coding synonymous_variant LOW 1116C>T Arg372Arg
M0032236 PLBDCLGH_00022 20061 6 Skin 0.15 protein_coding synonymous_variant LOW 1182C>T Asp394Asp
M0032237 PLBDCLGH_00023 20106 3 Skin 0.08 protein_coding missense_variant MODERATE 802C>A His268Asn
M0032238 PLBDCLGH_00023 20160 6 Skin 0.15 protein_coding missense_variant MODERATE 748T>A Ser250Thr
M0032239 PLBDCLGH_00023 20162 6 Skin 0.15 protein_coding missense_variant MODERATE 746A>G Gln249Arg
M0032240 PLBDCLGH_00023 20238 8 Skin 0.21 protein_coding synonymous_variant LOW 670T>C Leu224Leu
M0032241 PLBDCLGH_00023 20325 3 Skin 0.08 protein_coding missense_variant MODERATE 583C>T His195Tyr
M0032242 PLBDCLGH_00023 20582 6 Skin 0.15 protein_coding missense_variant MODERATE 326G>A Arg109Gln
M0032243 PLBDCLGH_00018 20912 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4754T>C None
M0032244 PLBDCLGH_00024 21401 6 Skin 0.15 protein_coding synonymous_variant LOW 18T>C Ala6Ala
M0032245 PLBDCLGH_00019 21513 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4591G>A None
M0032246 PLBDCLGH_00019 21517 7 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4595C>T None
M0032247 PLBDCLGH_00019 21742 7 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4820A>G None
M0032248 PLBDCLGH_00019 21903 7 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4981T>G None
M0032249 PLBDCLGH_00025 22033 6 Skin 0.15 protein_coding synonymous_variant LOW 57C>T His19His
M0032250 PLBDCLGH_00030 28348 4 Skin 0.10 protein_coding synonymous_variant LOW 648T>C Pro216Pro
M0032251 PLBDCLGH_00031 29186 5 Skin 0.13 protein_coding synonymous_variant LOW 195T>C Asp65Asp
M0032252 PLBDCLGH_00031 29459 4 Skin 0.10 protein_coding synonymous_variant LOW 468C>T Ala156Ala
M0032253 PLBDCLGH_00031 29678 6 Skin 0.15 protein_coding synonymous_variant LOW 687G>A Lys229Lys
M0032254 PLBDCLGH_00023 22226 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1319T>G None
M0032255 PLBDCLGH_00026 22501 8 Skin 0.21 protein_coding missense_variant MODERATE 574C>G Pro192Ala
M0032256 PLBDCLGH_00026 22553 3 Skin 0.08 protein_coding synonymous_variant LOW 522T>C Ile174Ile
M0032257 PLBDCLGH_00026 22628 8 Skin 0.21 protein_coding synonymous_variant LOW 447T>C His149His
M0032258 PLBDCLGH_00026 22746 3 Skin 0.08 protein_coding missense_variant MODERATE 329C>T Ala110Val
M0032259 PLBDCLGH_00026 22837 8 Skin 0.21 protein_coding missense_variant MODERATE 238G>T Ala80Ser
M0032260 PLBDCLGH_00026 22889 4 Skin 0.10 protein_coding synonymous_variant LOW 186C>T Cys62Cys
M0032261 PLBDCLGH_00023 23125 7 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -2218G>C None
M0032262 PLBDCLGH_00023 23150 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2243C>T None
M0032263 PLBDCLGH_00027 25012 3 Skin 0.08 protein_coding synonymous_variant LOW 1341A>G Leu447Leu
M0032264 PLBDCLGH_00026 27632 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4558G>A None
M0032265 PLBDCLGH_00026 27674 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4600A>G None
M0032266 PLBDCLGH_00002 524 4 Skin 0.10 protein_coding synonymous_variant LOW 423C>G Ala141Ala
M0032267 PLBDCLGH_00003 1549 3 Skin 0.08 protein_coding synonymous_variant LOW 504C>T Phe168Phe
M0032268 PLBDCLGH_00003 1704 4 Skin 0.10 protein_coding missense_variant MODERATE 659C>T Ala220Val
M0032269 PLBDCLGH_00003 1705 4 Skin 0.10 protein_coding synonymous_variant LOW 660G>C Ala220Ala
M0032270 PLBDCLGH_00001 2000 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1752T>G None
M0032271 PLBDCLGH_00001 2002 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1754A>G None
M0032272 PLBDCLGH_00004 2527 5 Skin 0.13 protein_coding synonymous_variant LOW 474C>T Thr158Thr
M0032273 PLBDCLGH_00001 3464 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3216G>A None
M0032274 PLBDCLGH_00001 3582 5 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3334T>A None
M0032275 PLBDCLGH_00001 3588 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3340T>C None
M0032276 PLBDCLGH_00006 5761 4 Skin 0.10 protein_coding missense_variant MODERATE 422A>G Glu141Gly
M0032277 PLBDCLGH_00007 6259 4 Skin 0.10 protein_coding missense_variant MODERATE 113T>C Leu38Pro
M0032278 PLBDCLGH_00007 6272 7 Skin 0.18 protein_coding synonymous_variant LOW 126G>C Thr42Thr
M0032279 PLBDCLGH_00007 6332 4 Skin 0.10 protein_coding synonymous_variant LOW 186G>T Ala62Ala
M0032280 PLBDCLGH_00007 6587 4 Skin 0.10 protein_coding synonymous_variant LOW 441C>G Leu147Leu
M0032281 PLBDCLGH_00007 6704 4 Skin 0.10 protein_coding synonymous_variant LOW 558C>G Ala186Ala
M0032282 PLBDCLGH_00007 6707 4 Skin 0.10 protein_coding synonymous_variant LOW 561T>A Ala187Ala
M0032283 PLBDCLGH_00007 6716 4 Skin 0.10 protein_coding synonymous_variant LOW 570A>G Thr190Thr
M0032284 PLBDCLGH_00007 6764 7 Skin 0.18 protein_coding synonymous_variant LOW 618G>C Leu206Leu
M0032285 PLBDCLGH_00007 6863 5 Skin 0.13 protein_coding synonymous_variant LOW 717C>G Leu239Leu
M0032286 PLBDCLGH_00007 7016 8 Skin 0.21 protein_coding synonymous_variant LOW 870C>G Ala290Ala
M0032287 PLBDCLGH_00007 7128 7 Skin 0.18 protein_coding missense_variant MODERATE 982A>G Ser328Gly
M0032288 PLBDCLGH_00007 7131 7 Skin 0.18 protein_coding missense_variant MODERATE 985C>A His329Asn
M0032289 PLBDCLGH_00007 7388 7 Skin 0.18 protein_coding synonymous_variant LOW 1242G>A Glu414Glu
M0032290 PLBDCLGH_00007 7451 4 Skin 0.10 protein_coding synonymous_variant LOW 1305C>T Asn435Asn
M0032291 PLBDCLGH_00007 7478 3 Skin 0.08 protein_coding synonymous_variant LOW 1332G>A Ala444Ala
M0032292 PLBDCLGH_00007 7637 3 Skin 0.08 protein_coding synonymous_variant LOW 1491C>G Gly497Gly
M0032293 PLBDCLGH_00007 7667 4 Skin 0.10 protein_coding synonymous_variant LOW 1521G>A Lys507Lys
M0032294 PLBDCLGH_00009 9654 3 Skin 0.08 protein_coding synonymous_variant LOW 1392G>A Gly464Gly
M0032295 PLBDCLGH_00009 9657 3 Skin 0.08 protein_coding synonymous_variant LOW 1395T>C Arg465Arg
M0032296 PLBDCLGH_00009 9660 5 Skin 0.13 protein_coding synonymous_variant LOW 1398A>G Gln466Gln
M0032297 PLBDCLGH_00009 9690 3 Skin 0.08 protein_coding synonymous_variant LOW 1428C>T Asp476Asp
M0032298 PLBDCLGH_00009 9693 5 Skin 0.13 protein_coding synonymous_variant LOW 1431C>G Pro477Pro
M0032299 PLBDCLGH_00009 9696 5 Skin 0.13 protein_coding synonymous_variant LOW 1434C>G Val478Val
M0032300 PLBDCLGH_00010 10075 3 Skin 0.08 protein_coding missense_variant MODERATE 292C>T Arg98Cys
M0032301 PLBDCLGH_00007 6878 3 Skin 0.08 protein_coding synonymous_variant LOW 732C>G Ala244Ala
M0032302 PLBDCLGH_00007 7532 5 Skin 0.13 protein_coding synonymous_variant LOW 1386G>C Leu462Leu
M0032303 PLBDCLGH_00008 8219 4 Skin 0.10 protein_coding missense_variant MODERATE 547A>G Asn183Asp
M0032304 PLBDCLGH_00009 9642 4 Skin 0.10 protein_coding synonymous_variant LOW 1380T>C Ser460Ser
M0032305 PLBDCLGH_00009 9643 4 Skin 0.10 protein_coding missense_variant MODERATE 1381T>A Ser461Thr
M0032306 PLBDCLGH_00009 9644 4 Skin 0.10 protein_coding missense_variant MODERATE 1382C>G Ser461Cys
M0032307 PLBDCLGH_00011 10355 3 Skin 0.08 protein_coding synonymous_variant LOW 153G>A Glu51Glu
M0032308 PLBDCLGH_00011 10376 4 Skin 0.10 protein_coding synonymous_variant LOW 174G>A Lys58Lys
M0032309 PLBDCLGH_00011 10400 3 Skin 0.08 protein_coding synonymous_variant LOW 198T>C Arg66Arg
M0032310 PLBDCLGH_00011 10406 3 Skin 0.08 protein_coding synonymous_variant LOW 204T>C Arg68Arg
M0032311 PLBDCLGH_00015 13305 4 Skin 0.10 protein_coding synonymous_variant LOW 183C>T Ala61Ala
M0032312 PLBDCLGH_00019 16416 5 Skin 0.13 protein_coding synonymous_variant LOW 507G>A Pro169Pro
M0032313 PLBDCLGH_00020 18242 5 Skin 0.13 protein_coding synonymous_variant LOW 1014T>C Asp338Asp
M0032314 PLBDCLGH_00020 18254 3 Skin 0.08 protein_coding synonymous_variant LOW 1026C>G Arg342Arg
M0032315 PLBDCLGH_00020 18263 5 Skin 0.13 protein_coding synonymous_variant LOW 1035G>A Glu345Glu
M0032316 PLBDCLGH_00020 18307 5 Skin 0.13 protein_coding missense_variant MODERATE 1079A>C Gln360Pro
M0032317 PLBDCLGH_00020 18393 5 Skin 0.13 protein_coding missense_variant MODERATE 1165C>T Pro389Ser
M0032318 PLBDCLGH_00021 18419 4 Skin 0.10 protein_coding synonymous_variant LOW 25C>T Leu9Leu
M0032319 PLBDCLGH_00021 18452 3 Skin 0.08 protein_coding synonymous_variant LOW 58C>T Leu20Leu
M0032320 PLBDCLGH_00021 18463 4 Skin 0.10 protein_coding synonymous_variant LOW 69C>T Ser23Ser
M0032321 PLBDCLGH_00021 18562 6 Skin 0.15 protein_coding synonymous_variant LOW 168T>C Ile56Ile
M0032322 PLBDCLGH_00021 18652 6 Skin 0.15 protein_coding synonymous_variant LOW 258C>T Ser86Ser
M0032323 PLBDCLGH_00021 18844 6 Skin 0.15 protein_coding synonymous_variant LOW 450T>C Ser150Ser
M0032324 PLBDCLGH_00022 18897 6 Skin 0.15 protein_coding synonymous_variant LOW 18T>C Phe6Phe
M0032325 PLBDCLGH_00023 20889 3 Skin 0.08 protein_coding missense_variant MODERATE 19C>T Pro7Ser
M0032326 PLBDCLGH_00018 20994 7 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4836A>T None
M0032327 PLBDCLGH_00019 21516 5 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4594G>A None
M0032328 PLBDCLGH_00031 29654 4 Skin 0.10 protein_coding synonymous_variant LOW 663C>T Thr221Thr
M0032329 PLBDCLGH_00001 4012 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3764G>A None
M0032330 PLBDCLGH_00001 4029 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3781G>A None
M0032331 PLBDCLGH_00020 18107 5 Skin 0.13 protein_coding synonymous_variant LOW 879T>C His293His
M0032332 PLBDCLGH_00020 18191 3 Skin 0.08 protein_coding synonymous_variant LOW 963A>G Gln321Gln
M0032333 PLBDCLGH_00020 18284 3 Skin 0.08 protein_coding synonymous_variant LOW 1056T>C Ala352Ala
M0032334 PLBDCLGH_00021 18865 3 Skin 0.08 protein_coding synonymous_variant LOW 471C>G Gly157Gly
M0032335 PLBDCLGH_00016 13692 3 Skin 0.08 protein_coding synonymous_variant LOW 147C>T His49His
M0032336 PLBDCLGH_00018 15904 4 Skin 0.10 protein_coding synonymous_variant LOW 255C>T Gly85Gly
M0032337 PLBDCLGH_00019 16491 3 Skin 0.08 protein_coding synonymous_variant LOW 432G>A Val144Val
M0032338 PLBDCLGH_00018 17015 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -857T>C None
M0032339 PLBDCLGH_00020 17354 5 Skin 0.13 protein_coding synonymous_variant LOW 126A>G Ala42Ala
M0032340 PLBDCLGH_00020 17378 5 Skin 0.13 protein_coding synonymous_variant LOW 150T>C Arg50Arg
M0032341 PLBDCLGH_00020 17567 3 Skin 0.08 protein_coding synonymous_variant LOW 339C>T Leu113Leu
M0032342 PLBDCLGH_00020 17582 3 Skin 0.08 protein_coding synonymous_variant LOW 354A>C Pro118Pro
M0032343 PLBDCLGH_00020 17600 4 Skin 0.10 protein_coding synonymous_variant LOW 372A>G Ala124Ala
M0032344 PLBDCLGH_00020 17624 4 Skin 0.10 protein_coding synonymous_variant LOW 396T>G Leu132Leu
M0032345 PLBDCLGH_00020 17679 3 Skin 0.08 protein_coding missense_variant MODERATE 451C>A Leu151Met
M0032346 PLBDCLGH_00020 17936 3 Skin 0.08 protein_coding synonymous_variant LOW 708T>C Ala236Ala
M0032347 PLBDCLGH_00020 18062 4 Skin 0.10 protein_coding synonymous_variant LOW 834T>C Gly278Gly
M0032348 PLBDCLGH_00018 20914 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4756T>A None
M0032349 PLBDCLGH_00018 20971 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4813A>C None
M0032350 PLBDCLGH_00018 21001 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4843G>A None
M0032351 PLBDCLGH_00020 17294 3 Skin 0.08 protein_coding synonymous_variant LOW 66T>C Arg22Arg
M0032352 PLBDCLGH_00026 22717 3 Skin 0.08 protein_coding missense_variant MODERATE 358C>T Pro120Ser
M0032353 PLBDCLGH_00018 21033 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4875T>C None
M0032354 PLBDCLGH_00023 23188 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2281G>C None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term