Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2325
  Reference Plasmid   1111525849766731_bin.14__k141_187256
  Reference Plasmid Size   88290
  Reference Plasmid GC Content   0.63
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0037214 BKIDACHG_00004 2896 8 Skin 0.01 protein_coding synonymous_variant LOW 72T>C Pro24Pro
M0037215 BKIDACHG_00004 2899 8 Skin 0.01 protein_coding synonymous_variant LOW 69C>T His23His
M0037216 BKIDACHG_00004 2914 8 Skin 0.01 protein_coding synonymous_variant LOW 54T>C His18His
M0037217 BKIDACHG_00005 3037 10 Skin 0.01 protein_coding synonymous_variant LOW 303T>C Gly101Gly
M0037218 BKIDACHG_00005 3043 10 Skin 0.01 protein_coding synonymous_variant LOW 297G>C Ala99Ala
M0037219 BKIDACHG_00005 3049 10 Skin 0.01 protein_coding synonymous_variant LOW 291C>G Thr97Thr
M0037220 BKIDACHG_00005 3058 10 Skin 0.01 protein_coding synonymous_variant LOW 282T>C Phe94Phe
M0037221 BKIDACHG_00005 3070 10 Skin 0.01 protein_coding synonymous_variant LOW 270C>G Thr90Thr
M0037222 BKIDACHG_00005 3103 10 Skin 0.01 protein_coding synonymous_variant LOW 237C>A Gly79Gly
M0037223 BKIDACHG_00005 3145 10 Skin 0.01 protein_coding synonymous_variant LOW 195C>G Val65Val
M0037224 BKIDACHG_00005 3151 10 Skin 0.01 protein_coding synonymous_variant LOW 189C>G Leu63Leu
M0037225 BKIDACHG_00005 3157 12 Skin 0.02 protein_coding synonymous_variant LOW 183A>G Val61Val
M0037226 BKIDACHG_00005 3187 10 Skin 0.01 protein_coding missense_variant MODERATE 153G>C Arg51Ser
M0037227 BKIDACHG_00005 3189 10 Skin 0.01 protein_coding synonymous_variant LOW 151A>C Arg51Arg
M0037228 BKIDACHG_00005 3247 13 Skin 0.02 protein_coding synonymous_variant LOW 93C>T Gly31Gly
M0037229 BKIDACHG_00005 3294 13 Skin 0.02 protein_coding missense_variant MODERATE 46A>G Met16Val
M0037230 BKIDACHG_00005 3310 13 Skin 0.02 protein_coding synonymous_variant LOW 30C>T Leu10Leu
M0037231 BKIDACHG_00006 3365 10 Skin 0.01 protein_coding synonymous_variant LOW 225T>C Leu75Leu
M0037232 BKIDACHG_00002 4068 17 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2197T>C None
M0037233 BKIDACHG_00002 4070 16 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2199G>A None
M0037234 BKIDACHG_00002 4091 16 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2220G>T None
M0037235 BKIDACHG_00002 4097 19 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2226C>G None
M0037236 BKIDACHG_00002 4099 17 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2228T>G None
M0037237 BKIDACHG_00002 4101 16 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2230A>G None
M0037238 BKIDACHG_00002 4125 15 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2254C>T None
M0037239 BKIDACHG_00011 6273 15 Skin 0.02 protein_coding missense_variant MODERATE 130A>G Thr44Ala
M0037240 BKIDACHG_00011 6387 14 Skin 0.02 protein_coding missense_variant MODERATE 244T>G Tyr82Asp
M0037241 BKIDACHG_00015 9249 14 Skin 0.02 protein_coding missense_variant MODERATE 463G>A Val155Ile
M0037242 BKIDACHG_00015 9284 17 Skin 0.02 protein_coding synonymous_variant LOW 498A>G Glu166Glu
M0037243 BKIDACHG_00015 9520 10 Skin 0.01 protein_coding missense_variant MODERATE 734G>A Arg245Gln
M0037244 BKIDACHG_00015 9901 10 Skin 0.01 protein_coding missense_variant MODERATE 1115G>A Gly372Glu
M0037245 BKIDACHG_00015 9911 10 Skin 0.01 protein_coding synonymous_variant LOW 1125T>C Ala375Ala
M0037246 BKIDACHG_00015 9917 10 Skin 0.01 protein_coding synonymous_variant LOW 1131A>G Ala377Ala
M0037247 BKIDACHG_00015 10463 8 Skin 0.01 protein_coding synonymous_variant LOW 1677A>G Leu559Leu
M0037248 BKIDACHG_00047 35560 85 Skin 0.12 protein_coding missense_variant MODERATE 190G>T Gly64Trp
M0037249 BKIDACHG_00079 67523 30 Skin 0.04 protein_coding missense_variant MODERATE 913G>A Ala305Thr
M0037250 BKIDACHG_00079 67557 31 Skin 0.04 protein_coding synonymous_variant LOW 879T>C Ala293Ala
M0037251 BKIDACHG_00079 67584 31 Skin 0.04 protein_coding synonymous_variant LOW 852T>A Pro284Pro
M0037252 BKIDACHG_00079 67874 32 Skin 0.05 protein_coding missense_variant MODERATE 562A>C Lys188Gln
M0037253 BKIDACHG_00082 71970 9 Skin 0.01 protein_coding synonymous_variant LOW 711G>A Arg237Arg
M0037254 BKIDACHG_00009 5056 11 Skin 0.02 protein_coding synonymous_variant LOW 417G>A Leu139Leu
M0037255 BKIDACHG_00009 5068 11 Skin 0.02 protein_coding synonymous_variant LOW 429T>C Asp143Asp
M0037256 BKIDACHG_00009 5080 11 Skin 0.02 protein_coding synonymous_variant LOW 441A>G Val147Val
M0037257 BKIDACHG_00010 5688 8 Skin 0.01 protein_coding synonymous_variant LOW 456G>C Ala152Ala
M0037258 BKIDACHG_00011 6572 10 Skin 0.01 protein_coding synonymous_variant LOW 429G>A Gly143Gly
M0037259 BKIDACHG_00014 8357 22 Skin 0.03 protein_coding synonymous_variant LOW 306T>G Val102Val
M0037260 BKIDACHG_00015 10146 10 Skin 0.01 protein_coding missense_variant MODERATE 1360T>G Trp454Gly
M0037261 BKIDACHG_00011 11434 104 Skin 0.15 protein_coding downstream_gene_variant MODIFIER *4820C>A None
M0037262 BKIDACHG_00016 11847 15 Skin 0.02 protein_coding missense_variant MODERATE 355G>C Ala119Pro
M0037263 BKIDACHG_00016 11855 15 Skin 0.02 protein_coding missense_variant MODERATE 347C>T Ala116Val
M0037264 BKIDACHG_00017 14379 8 Skin 0.01 protein_coding synonymous_variant LOW 9C>G Gly3Gly
M0037265 BKIDACHG_00031 24504 74 Skin 0.10 protein_coding synonymous_variant LOW 129G>T Thr43Thr
M0037266 BKIDACHG_00031 24519 73 Skin 0.10 protein_coding synonymous_variant LOW 114C>G Ala38Ala
M0037267 BKIDACHG_00032 25063 10 Skin 0.01 protein_coding missense_variant MODERATE 492T>G His164Gln
M0037268 BKIDACHG_00032 25078 8 Skin 0.01 protein_coding synonymous_variant LOW 477T>C Gly159Gly
M0037269 BKIDACHG_00032 25150 9 Skin 0.01 protein_coding synonymous_variant LOW 405A>C Ala135Ala
M0037270 BKIDACHG_00007 3838 8 Skin 0.01 protein_coding synonymous_variant LOW 132A>G Ala44Ala
M0037271 BKIDACHG_00007 3849 8 Skin 0.01 protein_coding synonymous_variant LOW 121C>T Leu41Leu
M0037272 BKIDACHG_00007 3862 10 Skin 0.01 protein_coding synonymous_variant LOW 108A>G Ala36Ala
M0037273 BKIDACHG_00007 3868 11 Skin 0.02 protein_coding synonymous_variant LOW 102T>C Ser34Ser
M0037274 BKIDACHG_00007 3880 9 Skin 0.01 protein_coding synonymous_variant LOW 90C>G Ala30Ala
M0037275 BKIDACHG_00007 3887 9 Skin 0.01 protein_coding missense_variant MODERATE 83A>C Gln28Pro
M0037276 BKIDACHG_00007 3903 9 Skin 0.01 protein_coding missense_variant MODERATE 67C>G Leu23Val
M0037277 BKIDACHG_00012 6892 10 Skin 0.01 protein_coding synonymous_variant LOW 282A>G Thr94Thr
M0037278 BKIDACHG_00012 6985 13 Skin 0.02 protein_coding synonymous_variant LOW 375A>G Arg125Arg
M0037279 BKIDACHG_00012 7000 13 Skin 0.02 protein_coding synonymous_variant LOW 390A>G Gly130Gly
M0037280 BKIDACHG_00014 8546 8 Skin 0.01 protein_coding synonymous_variant LOW 495T>C Gly165Gly
M0037281 BKIDACHG_00007 8782 11 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4813C>A None
M0037282 BKIDACHG_00015 8832 13 Skin 0.02 protein_coding missense_variant MODERATE 46G>A Ala16Thr
M0037283 BKIDACHG_00026 21480 9 Skin 0.01 protein_coding synonymous_variant LOW 450T>C Val150Val
M0037284 BKIDACHG_00026 21510 8 Skin 0.01 protein_coding synonymous_variant LOW 420C>G Leu140Leu
M0037285 BKIDACHG_00026 21513 9 Skin 0.01 protein_coding synonymous_variant LOW 417G>T Thr139Thr
M0037286 BKIDACHG_00026 21514 8 Skin 0.01 protein_coding missense_variant MODERATE 416C>G Thr139Arg
M0037287 BKIDACHG_00026 21537 8 Skin 0.01 protein_coding synonymous_variant LOW 393T>C Leu131Leu
M0037288 BKIDACHG_00026 21581 8 Skin 0.01 protein_coding missense_variant MODERATE 349G>A Val117Ile
M0037289 BKIDACHG_00026 21606 64 Skin 0.09 protein_coding synonymous_variant LOW 324A>G Pro108Pro
M0037290 BKIDACHG_00026 21618 64 Skin 0.09 protein_coding synonymous_variant LOW 312G>C Leu104Leu
M0037291 BKIDACHG_00026 21621 64 Skin 0.09 protein_coding synonymous_variant LOW 309A>G Leu103Leu
M0037292 BKIDACHG_00026 21624 64 Skin 0.09 protein_coding synonymous_variant LOW 306A>G Gly102Gly
M0037293 BKIDACHG_00026 21644 64 Skin 0.09 protein_coding missense_variant MODERATE 286A>G Ile96Val
M0037294 BKIDACHG_00026 21669 9 Skin 0.01 protein_coding synonymous_variant LOW 261G>A Leu87Leu
M0037295 BKIDACHG_00026 21702 11 Skin 0.02 protein_coding synonymous_variant LOW 228G>A Ala76Ala
M0037296 BKIDACHG_00026 21726 11 Skin 0.02 protein_coding synonymous_variant LOW 204C>G Ala68Ala
M0037297 BKIDACHG_00026 21738 12 Skin 0.02 protein_coding synonymous_variant LOW 192A>C Ala64Ala
M0037298 BKIDACHG_00026 21759 12 Skin 0.02 protein_coding synonymous_variant LOW 171T>C His57His
M0037299 BKIDACHG_00026 21804 9 Skin 0.01 protein_coding synonymous_variant LOW 126C>T Leu42Leu
M0037300 BKIDACHG_00026 21873 15 Skin 0.02 protein_coding synonymous_variant LOW 57G>A Pro19Pro
M0037301 BKIDACHG_00026 21882 64 Skin 0.09 protein_coding synonymous_variant LOW 48G>T Gly16Gly
M0037302 BKIDACHG_00026 21885 65 Skin 0.09 protein_coding synonymous_variant LOW 45T>C Asn15Asn
M0037303 BKIDACHG_00026 21888 65 Skin 0.09 protein_coding synonymous_variant LOW 42A>G Lys14Lys
M0037304 BKIDACHG_00026 21924 66 Skin 0.09 protein_coding synonymous_variant LOW 6T>C Ala2Ala
M0037305 BKIDACHG_00022 21959 14 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4460T>C None
M0037306 BKIDACHG_00022 21986 14 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4487T>A None
M0037307 BKIDACHG_00027 21997 14 Skin 0.02 protein_coding synonymous_variant LOW 645T>C Ala215Ala
M0037308 BKIDACHG_00027 22021 15 Skin 0.02 protein_coding synonymous_variant LOW 621T>C Ile207Ile
M0037309 BKIDACHG_00027 22045 14 Skin 0.02 protein_coding synonymous_variant LOW 597C>G Thr199Thr
M0037310 BKIDACHG_00027 22052 16 Skin 0.02 protein_coding missense_variant MODERATE 590C>T Ala197Val
M0037311 BKIDACHG_00027 22057 19 Skin 0.03 protein_coding synonymous_variant LOW 585C>T Ser195Ser
M0037312 BKIDACHG_00027 22072 15 Skin 0.02 protein_coding synonymous_variant LOW 570C>T Gly190Gly
M0037313 BKIDACHG_00027 22075 19 Skin 0.03 protein_coding synonymous_variant LOW 567C>G Leu189Leu
M0037314 BKIDACHG_00027 22125 19 Skin 0.03 protein_coding synonymous_variant LOW 517C>T Leu173Leu
M0037315 BKIDACHG_00027 22201 20 Skin 0.03 protein_coding synonymous_variant LOW 441T>C Asp147Asp
M0037316 BKIDACHG_00027 22257 19 Skin 0.03 protein_coding synonymous_variant LOW 385A>C Arg129Arg
M0037317 BKIDACHG_00027 22268 12 Skin 0.02 protein_coding missense_variant MODERATE 374A>G Asp125Gly
M0037318 BKIDACHG_00027 22270 19 Skin 0.03 protein_coding synonymous_variant LOW 372C>G Arg124Arg
M0037319 BKIDACHG_00027 22271 12 Skin 0.02 protein_coding missense_variant MODERATE 371G>A Arg124His
M0037320 BKIDACHG_00027 22287 12 Skin 0.02 protein_coding synonymous_variant LOW 355T>C Leu119Leu
M0037321 BKIDACHG_00031 24603 9 Skin 0.01 protein_coding synonymous_variant LOW 30T>G Ser10Ser
M0037322 BKIDACHG_00031 24614 8 Skin 0.01 protein_coding missense_variant MODERATE 19T>C Ser7Pro
M0037323 BKIDACHG_00031 24615 8 Skin 0.01 protein_coding synonymous_variant LOW 18T>A Ala6Ala
M0037324 BKIDACHG_00031 24619 8 Skin 0.01 protein_coding missense_variant MODERATE 14C>T Ser5Leu
M0037325 BKIDACHG_00033 26014 10 Skin 0.01 protein_coding missense_variant MODERATE 592G>A Val198Ile
M0037326 BKIDACHG_00054 45083 12 Skin 0.02 protein_coding synonymous_variant LOW 24G>A Lys8Lys
M0037327 BKIDACHG_00001 97 61 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -424G>T None
M0037328 BKIDACHG_00001 614 56 Skin 0.08 protein_coding synonymous_variant LOW 94T>C Leu32Leu
M0037329 BKIDACHG_00001 880 59 Skin 0.08 protein_coding synonymous_variant LOW 360C>T Ala120Ala
M0037330 BKIDACHG_00001 909 59 Skin 0.08 protein_coding missense_variant MODERATE 389G>A Gly130Asp
M0037331 BKIDACHG_00002 1647 61 Skin 0.09 protein_coding synonymous_variant LOW 225T>C Arg75Arg
M0037332 BKIDACHG_00002 1665 59 Skin 0.08 protein_coding synonymous_variant LOW 207C>T Gly69Gly
M0037333 BKIDACHG_00002 1691 62 Skin 0.09 protein_coding missense_variant MODERATE 181A>G Lys61Glu
M0037334 BKIDACHG_00002 1701 62 Skin 0.09 protein_coding synonymous_variant LOW 171A>G Ala57Ala
M0037335 BKIDACHG_00002 1737 60 Skin 0.08 protein_coding synonymous_variant LOW 135A>G Val45Val
M0037336 BKIDACHG_00003 1902 9 Skin 0.01 protein_coding missense_variant MODERATE 659C>A Ser220Tyr
M0037337 BKIDACHG_00003 1903 9 Skin 0.01 protein_coding missense_variant MODERATE 658T>A Ser220Thr
M0037338 BKIDACHG_00003 1908 9 Skin 0.01 protein_coding missense_variant MODERATE 653G>A Gly218Asp
M0037339 BKIDACHG_00003 1915 11 Skin 0.02 protein_coding missense_variant MODERATE 646T>C Ser216Pro
M0037340 BKIDACHG_00008 4487 8 Skin 0.01 protein_coding synonymous_variant LOW 315A>C Leu105Leu
M0037341 BKIDACHG_00016 11931 17 Skin 0.02 protein_coding synonymous_variant LOW 271C>T Leu91Leu
M0037342 BKIDACHG_00016 11959 16 Skin 0.02 protein_coding synonymous_variant LOW 243G>A Val81Val
M0037343 BKIDACHG_00017 12558 9 Skin 0.01 protein_coding synonymous_variant LOW 1830C>T Asp610Asp
M0037344 BKIDACHG_00017 13977 19 Skin 0.03 protein_coding synonymous_variant LOW 411G>A Glu137Glu
M0037345 BKIDACHG_00015 11250 12 Skin 0.02 protein_coding synonymous_variant LOW 2464A>C Arg822Arg
M0037346 BKIDACHG_00016 12008 10 Skin 0.01 protein_coding missense_variant MODERATE 194A>G Gln65Arg
M0037347 BKIDACHG_00021 16471 65 Skin 0.09 protein_coding synonymous_variant LOW 433T>C Leu145Leu
M0037348 BKIDACHG_00023 17683 70 Skin 0.10 protein_coding synonymous_variant LOW 2235C>T Gly745Gly
M0037349 BKIDACHG_00023 17710 68 Skin 0.10 protein_coding synonymous_variant LOW 2208G>C Ser736Ser
M0037350 BKIDACHG_00023 17923 52 Skin 0.07 protein_coding synonymous_variant LOW 1995T>C Asp665Asp
M0037351 BKIDACHG_00023 17943 52 Skin 0.07 protein_coding synonymous_variant LOW 1975C>T Leu659Leu
M0037352 BKIDACHG_00023 18412 12 Skin 0.02 protein_coding synonymous_variant LOW 1506T>C Arg502Arg
M0037353 BKIDACHG_00023 18448 14 Skin 0.02 protein_coding synonymous_variant LOW 1470T>C Gly490Gly
M0037354 BKIDACHG_00023 18469 15 Skin 0.02 protein_coding synonymous_variant LOW 1449T>C Phe483Phe
M0037355 BKIDACHG_00023 18498 13 Skin 0.02 protein_coding synonymous_variant LOW 1420C>T Leu474Leu
M0037356 BKIDACHG_00023 18499 13 Skin 0.02 protein_coding synonymous_variant LOW 1419G>C Val473Val
M0037357 BKIDACHG_00023 18514 15 Skin 0.02 protein_coding synonymous_variant LOW 1404T>C Phe468Phe
M0037358 BKIDACHG_00023 18517 15 Skin 0.02 protein_coding synonymous_variant LOW 1401G>C Gly467Gly
M0037359 BKIDACHG_00023 18523 12 Skin 0.02 protein_coding synonymous_variant LOW 1395C>T Ala465Ala
M0037360 BKIDACHG_00001 1076 9 Skin 0.01 protein_coding missense_variant MODERATE 556C>G Pro186Ala
M0037361 BKIDACHG_00002 1089 9 Skin 0.01 protein_coding synonymous_variant LOW 783C>G Leu261Leu
M0037362 BKIDACHG_00002 1092 8 Skin 0.01 protein_coding synonymous_variant LOW 780C>G Val260Val
M0037363 BKIDACHG_00002 1109 8 Skin 0.01 protein_coding missense_variant MODERATE 763C>A Pro255Thr
M0037364 BKIDACHG_00002 1261 13 Skin 0.02 protein_coding missense_variant MODERATE 611C>T Ala204Val
M0037365 BKIDACHG_00002 1264 13 Skin 0.02 protein_coding missense_variant MODERATE 608T>C Val203Ala
M0037366 BKIDACHG_00002 1317 8 Skin 0.01 protein_coding synonymous_variant LOW 555G>T Leu185Leu
M0037367 BKIDACHG_00016 11677 27 Skin 0.04 protein_coding synonymous_variant LOW 525C>T Ile175Ile
M0037368 BKIDACHG_00016 11695 27 Skin 0.04 protein_coding synonymous_variant LOW 507A>G Ala169Ala
M0037369 BKIDACHG_00016 11698 27 Skin 0.04 protein_coding synonymous_variant LOW 504T>G Thr168Thr
M0037370 BKIDACHG_00016 11722 27 Skin 0.04 protein_coding synonymous_variant LOW 480A>G Val160Val
M0037371 BKIDACHG_00016 12065 13 Skin 0.02 protein_coding missense_variant MODERATE 137T>C Val46Ala
M0037372 BKIDACHG_00016 12100 11 Skin 0.02 protein_coding synonymous_variant LOW 102C>T Ile34Ile
M0037373 BKIDACHG_00016 12127 9 Skin 0.01 protein_coding synonymous_variant LOW 75G>A Leu25Leu
M0037374 BKIDACHG_00016 12151 8 Skin 0.01 protein_coding synonymous_variant LOW 51G>C Gly17Gly
M0037375 BKIDACHG_00016 11544 9 Skin 0.01 protein_coding missense_variant MODERATE 658G>T Ala220Ser
M0037376 BKIDACHG_00016 11554 9 Skin 0.01 protein_coding synonymous_variant LOW 648A>T Ala216Ala
M0037377 BKIDACHG_00054 44683 17 Skin 0.02 protein_coding missense_variant MODERATE 424A>C Lys142Gln
M0037378 BKIDACHG_00054 44794 40 Skin 0.06 protein_coding missense_variant MODERATE 313C>G Gln105Glu
M0037379 BKIDACHG_00075 63016 42 Skin 0.06 protein_coding synonymous_variant LOW 381A>C Pro127Pro
M0037380 BKIDACHG_00077 64848 31 Skin 0.04 protein_coding missense_variant MODERATE 1489G>A Ala497Thr
M0037381 BKIDACHG_00081 69639 27 Skin 0.04 protein_coding synonymous_variant LOW 1059G>A Gln353Gln
M0037382 BKIDACHG_00023 18016 58 Skin 0.08 protein_coding synonymous_variant LOW 1902C>T Asp634Asp
M0037383 BKIDACHG_00023 18052 55 Skin 0.08 protein_coding synonymous_variant LOW 1866G>A Glu622Glu
M0037384 BKIDACHG_00023 18066 53 Skin 0.07 protein_coding synonymous_variant LOW 1852C>T Leu618Leu
M0037385 BKIDACHG_00023 18121 47 Skin 0.07 protein_coding synonymous_variant LOW 1797T>C Val599Val
M0037386 BKIDACHG_00023 18133 47 Skin 0.07 protein_coding synonymous_variant LOW 1785A>G Gln595Gln
M0037387 BKIDACHG_00023 18169 46 Skin 0.06 protein_coding synonymous_variant LOW 1749C>T Arg583Arg
M0037388 BKIDACHG_00023 18175 45 Skin 0.06 protein_coding synonymous_variant LOW 1743A>G Lys581Lys
M0037389 BKIDACHG_00023 18178 45 Skin 0.06 protein_coding synonymous_variant LOW 1740G>C Pro580Pro
M0037390 BKIDACHG_00023 18181 46 Skin 0.06 protein_coding synonymous_variant LOW 1737A>C Thr579Thr
M0037391 BKIDACHG_00023 18182 46 Skin 0.06 protein_coding missense_variant MODERATE 1736C>G Thr579Arg
M0037392 BKIDACHG_00023 18184 45 Skin 0.06 protein_coding synonymous_variant LOW 1734G>C Val578Val
M0037393 BKIDACHG_00023 18186 45 Skin 0.06 protein_coding missense_variant MODERATE 1732G>A Val578Met
M0037394 BKIDACHG_00023 18214 44 Skin 0.06 protein_coding synonymous_variant LOW 1704C>T Phe568Phe
M0037395 BKIDACHG_00015 11333 9 Skin 0.01 protein_coding synonymous_variant LOW 2547C>T Phe849Phe
M0037396 BKIDACHG_00032 24865 9 Skin 0.01 protein_coding synonymous_variant LOW 690A>C Leu230Leu
M0037397 BKIDACHG_00009 4783 10 Skin 0.01 protein_coding synonymous_variant LOW 144T>C Asn48Asn
M0037398 BKIDACHG_00009 4906 8 Skin 0.01 protein_coding synonymous_variant LOW 267A>G Leu89Leu
M0037399 BKIDACHG_00009 4916 8 Skin 0.01 protein_coding missense_variant MODERATE 277A>G Asn93Asp
M0037400 BKIDACHG_00009 4921 8 Skin 0.01 protein_coding synonymous_variant LOW 282T>C Asp94Asp
M0037401 BKIDACHG_00009 5131 10 Skin 0.01 protein_coding missense_variant MODERATE 492T>G Asp164Glu
M0037402 BKIDACHG_00009 5164 11 Skin 0.02 protein_coding synonymous_variant LOW 525A>G Gln175Gln
M0037403 BKIDACHG_00015 9630 15 Skin 0.02 protein_coding missense_variant MODERATE 844G>A Ala282Thr
M0037404 BKIDACHG_00015 9818 18 Skin 0.03 protein_coding synonymous_variant LOW 1032G>C Ala344Ala
M0037405 BKIDACHG_00015 10648 14 Skin 0.02 protein_coding missense_variant MODERATE 1862T>C Val621Ala
M0037406 BKIDACHG_00015 10751 8 Skin 0.01 protein_coding synonymous_variant LOW 1965C>A Ile655Ile
M0037407 BKIDACHG_00015 10769 8 Skin 0.01 protein_coding synonymous_variant LOW 1983T>C Asn661Asn
M0037408 BKIDACHG_00015 10775 8 Skin 0.01 protein_coding synonymous_variant LOW 1989A>C Ile663Ile
M0037409 BKIDACHG_00026 21597 55 Skin 0.08 protein_coding synonymous_variant LOW 333C>G Gly111Gly
M0037410 BKIDACHG_00026 21609 56 Skin 0.08 protein_coding synonymous_variant LOW 321T>C Asn107Asn
M0037411 BKIDACHG_00026 21612 56 Skin 0.08 protein_coding synonymous_variant LOW 318G>C Leu106Leu
M0037412 BKIDACHG_00027 22420 54 Skin 0.08 protein_coding synonymous_variant LOW 222G>A Val74Val
M0037413 BKIDACHG_00027 22525 19 Skin 0.03 protein_coding synonymous_variant LOW 117G>C Arg39Arg
M0037414 BKIDACHG_00026 21846 50 Skin 0.07 protein_coding synonymous_variant LOW 84C>G Ala28Ala
M0037415 BKIDACHG_00026 21877 49 Skin 0.07 protein_coding missense_variant MODERATE 53A>T Tyr18Phe
M0037416 BKIDACHG_00026 21879 49 Skin 0.07 protein_coding synonymous_variant LOW 51C>T Tyr17Tyr
M0037417 BKIDACHG_00026 21892 49 Skin 0.07 protein_coding missense_variant MODERATE 38C>T Ala13Val
M0037418 BKIDACHG_00007 3599 9 Skin 0.01 protein_coding missense_variant MODERATE 371G>A Gly124Glu
M0037419 BKIDACHG_00002 3999 13 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2128C>A None
M0037420 BKIDACHG_00002 4024 14 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2153A>G None
M0037421 BKIDACHG_00023 18747 15 Skin 0.02 protein_coding synonymous_variant LOW 1171T>C Leu391Leu
M0037422 BKIDACHG_00023 18754 13 Skin 0.02 protein_coding synonymous_variant LOW 1164C>T Thr388Thr
M0037423 BKIDACHG_00027 22348 14 Skin 0.02 protein_coding synonymous_variant LOW 294G>C Leu98Leu
M0037424 BKIDACHG_00027 22354 19 Skin 0.03 protein_coding synonymous_variant LOW 288C>A Gly96Gly
M0037425 BKIDACHG_00027 22366 19 Skin 0.03 protein_coding synonymous_variant LOW 276G>A Arg92Arg
M0037426 BKIDACHG_00027 22375 18 Skin 0.03 protein_coding synonymous_variant LOW 267G>T Ala89Ala
M0037427 BKIDACHG_00027 22630 12 Skin 0.02 protein_coding synonymous_variant LOW 12C>T Asn4Asn
M0037428 BKIDACHG_00027 22633 11 Skin 0.02 protein_coding synonymous_variant LOW 9A>C Ala3Ala
M0037429 BKIDACHG_00027 22635 11 Skin 0.02 protein_coding missense_variant MODERATE 7G>A Ala3Thr
M0037430 BKIDACHG_00023 22672 11 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2755G>A None
M0037431 BKIDACHG_00023 22698 12 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2781T>C None
M0037432 BKIDACHG_00023 22714 11 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2797G>A None
M0037433 BKIDACHG_00043 33165 10 Skin 0.01 protein_coding synonymous_variant LOW 171G>T Val57Val
M0037434 BKIDACHG_00043 33167 10 Skin 0.01 protein_coding missense_variant MODERATE 169G>A Val57Met
M0037435 BKIDACHG_00047 35748 15 Skin 0.02 protein_coding start_lost HIGH 2T>C Met1?
M0037436 BKIDACHG_00051 42683 18 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2490C>T None
M0037437 BKIDACHG_00075 62785 40 Skin 0.06 protein_coding synonymous_variant LOW 150C>T Thr50Thr
M0037438 BKIDACHG_00003 2036 13 Skin 0.02 protein_coding synonymous_variant LOW 525T>C Arg175Arg
M0037439 BKIDACHG_00003 2051 9 Skin 0.01 protein_coding synonymous_variant LOW 510G>A Lys170Lys
M0037440 BKIDACHG_00003 2120 8 Skin 0.01 protein_coding synonymous_variant LOW 441G>A Val147Val
M0037441 BKIDACHG_00018 14512 8 Skin 0.01 protein_coding synonymous_variant LOW 429G>A Ala143Ala
M0037442 BKIDACHG_00023 18607 21 Skin 0.03 protein_coding synonymous_variant LOW 1311G>C Val437Val
M0037443 BKIDACHG_00022 21957 52 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4458A>T None
M0037444 BKIDACHG_00022 21958 51 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4459C>G None
M0037445 BKIDACHG_00022 21966 51 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4467G>A None
M0037446 BKIDACHG_00028 22850 10 Skin 0.01 protein_coding missense_variant MODERATE 129C>G Asp43Glu
M0037447 BKIDACHG_00031 24110 8 Skin 0.01 protein_coding missense_variant MODERATE 523G>C Ala175Pro
M0037448 BKIDACHG_00031 24122 8 Skin 0.01 protein_coding missense_variant MODERATE 511G>C Glu171Gln
M0037449 BKIDACHG_00031 24141 8 Skin 0.01 protein_coding synonymous_variant LOW 492C>T Ala164Ala
M0037450 BKIDACHG_00031 24145 8 Skin 0.01 protein_coding missense_variant MODERATE 488C>A Thr163Lys
M0037451 BKIDACHG_00031 24146 8 Skin 0.01 protein_coding missense_variant MODERATE 487A>G Thr163Ala
M0037452 BKIDACHG_00031 24153 8 Skin 0.01 protein_coding synonymous_variant LOW 480G>A Pro160Pro
M0037453 BKIDACHG_00031 24156 9 Skin 0.01 protein_coding synonymous_variant LOW 477A>G Pro159Pro
M0037454 BKIDACHG_00031 24171 10 Skin 0.01 protein_coding synonymous_variant LOW 462C>T Phe154Phe
M0037455 BKIDACHG_00031 24191 9 Skin 0.01 protein_coding missense_variant MODERATE 442C>A Leu148Met
M0037456 BKIDACHG_00006 3401 11 Skin 0.02 protein_coding synonymous_variant LOW 189C>A Arg63Arg
M0037457 BKIDACHG_00006 3443 8 Skin 0.01 protein_coding synonymous_variant LOW 147G>A Glu49Glu
M0037458 BKIDACHG_00006 3533 21 Skin 0.03 protein_coding synonymous_variant LOW 57A>G Ala19Ala
M0037459 BKIDACHG_00006 3536 9 Skin 0.01 protein_coding synonymous_variant LOW 54C>A Ser18Ser
M0037460 BKIDACHG_00009 4984 8 Skin 0.01 protein_coding synonymous_variant LOW 345T>G Arg115Arg
M0037461 BKIDACHG_00015 10919 12 Skin 0.02 protein_coding synonymous_variant LOW 2133C>T Ile711Ile
M0037462 BKIDACHG_00017 13743 16 Skin 0.02 protein_coding synonymous_variant LOW 645T>C Arg215Arg
M0037463 BKIDACHG_00006 3548 11 Skin 0.02 protein_coding synonymous_variant LOW 42C>T Gly14Gly
M0037464 BKIDACHG_00005 3214 8 Skin 0.01 protein_coding synonymous_variant LOW 126C>A Thr42Thr
M0037465 BKIDACHG_00005 3250 8 Skin 0.01 protein_coding synonymous_variant LOW 90A>G Gln30Gln
M0037466 BKIDACHG_00005 3277 9 Skin 0.01 protein_coding synonymous_variant LOW 63C>A Ala21Ala
M0037467 BKIDACHG_00005 3334 8 Skin 0.01 protein_coding missense_variant MODERATE 6C>A His2Gln
M0037468 BKIDACHG_00002 3344 8 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -1473C>T None
M0037469 BKIDACHG_00002 3345 8 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -1474C>A None
M0037470 BKIDACHG_00006 3362 8 Skin 0.01 protein_coding synonymous_variant LOW 228G>C Leu76Leu
M0037471 BKIDACHG_00006 3375 8 Skin 0.01 protein_coding missense_variant MODERATE 215G>C Ser72Thr
M0037472 BKIDACHG_00015 9986 13 Skin 0.02 protein_coding synonymous_variant LOW 1200A>G Gln400Gln
M0037473 BKIDACHG_00015 10004 9 Skin 0.01 protein_coding synonymous_variant LOW 1218G>A Thr406Thr
M0037474 BKIDACHG_00015 10034 12 Skin 0.02 protein_coding missense_variant MODERATE 1248G>T Trp416Cys
M0037475 BKIDACHG_00029 23006 9 Skin 0.01 protein_coding missense_variant MODERATE 397T>C Ser133Pro
M0037476 BKIDACHG_00029 23018 8 Skin 0.01 protein_coding missense_variant MODERATE 385T>C Ser129Pro
M0037477 BKIDACHG_00029 23024 8 Skin 0.01 protein_coding missense_variant MODERATE 379G>A Ala127Thr
M0037478 BKIDACHG_00009 4847 9 Skin 0.01 protein_coding synonymous_variant LOW 208A>C Arg70Arg
M0037479 BKIDACHG_00009 4852 9 Skin 0.01 protein_coding synonymous_variant LOW 213C>A Ala71Ala
M0037480 BKIDACHG_00012 6715 15 Skin 0.02 protein_coding synonymous_variant LOW 105T>C Pro35Pro
M0037481 BKIDACHG_00012 6724 15 Skin 0.02 protein_coding synonymous_variant LOW 114T>C Phe38Phe
M0037482 BKIDACHG_00014 8222 8 Skin 0.01 protein_coding synonymous_variant LOW 171C>G Ala57Ala
M0037483 BKIDACHG_00039 31092 9 Skin 0.01 protein_coding missense_variant MODERATE 112G>A Gly38Ser
M0037484 BKIDACHG_00006 3470 8 Skin 0.01 protein_coding missense_variant MODERATE 120C>G Ile40Met
M0037485 BKIDACHG_00006 3488 9 Skin 0.01 protein_coding synonymous_variant LOW 102G>C Val34Val
M0037486 BKIDACHG_00082 72093 11 Skin 0.02 protein_coding synonymous_variant LOW 588C>T Thr196Thr
M0037487 BKIDACHG_00010 6088 12 Skin 0.02 protein_coding synonymous_variant LOW 856T>C Leu286Leu
M0037488 BKIDACHG_00013 7518 9 Skin 0.01 protein_coding synonymous_variant LOW 408T>C Asp136Asp
M0037489 BKIDACHG_00010 5301 8 Skin 0.01 protein_coding synonymous_variant LOW 69T>C Asp23Asp
M0037490 BKIDACHG_00010 5303 8 Skin 0.01 protein_coding missense_variant MODERATE 71A>C Lys24Thr
M0037491 BKIDACHG_00010 5313 8 Skin 0.01 protein_coding synonymous_variant LOW 81T>C Gly27Gly
M0037492 BKIDACHG_00010 5315 8 Skin 0.01 protein_coding missense_variant MODERATE 83A>C Asp28Ala
M0037493 BKIDACHG_00010 5317 8 Skin 0.01 protein_coding synonymous_variant LOW 85T>C Leu29Leu
M0037494 BKIDACHG_00010 5328 8 Skin 0.01 protein_coding synonymous_variant LOW 96G>C Ser32Ser
M0037495 BKIDACHG_00010 5334 8 Skin 0.01 protein_coding synonymous_variant LOW 102G>C Val34Val
M0037496 BKIDACHG_00010 5346 8 Skin 0.01 protein_coding synonymous_variant LOW 114C>T Ala38Ala
M0037497 BKIDACHG_00010 5347 8 Skin 0.01 protein_coding missense_variant MODERATE 115A>C Ile39Leu
M0037498 BKIDACHG_00010 5352 8 Skin 0.01 protein_coding synonymous_variant LOW 120A>G Lys40Lys
M0037499 BKIDACHG_00010 5355 8 Skin 0.01 protein_coding synonymous_variant LOW 123A>G Lys41Lys
M0037500 BKIDACHG_00015 11048 10 Skin 0.01 protein_coding synonymous_variant LOW 2262C>T Arg754Arg
M0037501 BKIDACHG_00023 18694 10 Skin 0.01 protein_coding synonymous_variant LOW 1224G>C Pro408Pro
M0037502 BKIDACHG_00023 18697 11 Skin 0.02 protein_coding synonymous_variant LOW 1221T>G Leu407Leu
M0037503 BKIDACHG_00023 18717 10 Skin 0.01 protein_coding missense_variant MODERATE 1201C>T His401Tyr
M0037504 BKIDACHG_00081 69417 8 Skin 0.01 protein_coding synonymous_variant LOW 1281G>C Ala427Ala
M0037505 BKIDACHG_00015 10233 8 Skin 0.01 protein_coding missense_variant MODERATE 1447C>A His483Asn
M0037506 BKIDACHG_00023 18715 8 Skin 0.01 protein_coding synonymous_variant LOW 1203C>T His401His
M0037507 BKIDACHG_00023 18733 8 Skin 0.01 protein_coding synonymous_variant LOW 1185C>T Tyr395Tyr
M0037508 BKIDACHG_00003 2198 8 Skin 0.01 protein_coding synonymous_variant LOW 363A>G Leu121Leu
M0037509 BKIDACHG_00003 2234 8 Skin 0.01 protein_coding synonymous_variant LOW 327C>G Arg109Arg
M0037510 BKIDACHG_00003 2237 8 Skin 0.01 protein_coding synonymous_variant LOW 324T>G Leu108Leu






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group
BKIDACHG_00037 Mercury (Hg) 81.9 2.5e-259 1 562 1.0000 1.0000 experiment
BKIDACHG_00039 Mercury (Hg) 87.1 6.8e-55 1 116 1.0000 1.0000 experiment
BKIDACHG_00040 Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury] 75.8 3.3e-53 1 132 0.9778 0.9167 experiment
BKIDACHG_00051 Lead (Pb) 70.6 4.9e-303 214 980 0.7856 0.9675 experiment
BKIDACHG_00069 Arsenic (As), Antimony (Sb) 72.9 5.7e-56 1 140 1.0000 0.9929 experiment
BKIDACHG_00070 Arsenic (As) 73.5 8.7e-89 28 240 0.8958 0.9267 experiment
BKIDACHG_00037 Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury] 100 3.60000000001819e-313 1 562 1.0000 1.0000 prediction
BKIDACHG_00038 Mercury (Hg) 88.4 7e-35 1 95 1.0000 1.0326 prediction
BKIDACHG_00039 Mercury (Hg) 97.4 2.5e-58 1 116 1.0000 1.0000 prediction
BKIDACHG_00040 Mercury (Hg) 100 1e-71 1 135 1.0000 1.0000 prediction
BKIDACHG_00051 Lead (Pb) 70.6 1.1e-300 214 980 0.7856 0.9675 prediction
BKIDACHG_00069 Arsenic (As) 72.1 2e-54 1 140 1.0000 0.9929 prediction
BKIDACHG_00070 Arsenic (As) 86.7 1.2e-118 1 240 1.0000 1.0000 prediction






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
BKIDACHG_00019 SDV09107.1|GH23 100 5.4e-131 1 189 1 1
BKIDACHG_00075 AXQ47638.1|GT25 99.6 4.36e-177 1 238 1 1
BKIDACHG_00093 AXQ47649.1|PL7_2 99.6 1.2e-158 1 224 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
BKIDACHG_00039 1.A.72.3.1 81.9 1e-49 1 116 1.0000 1.2747 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
BKIDACHG_00051 3.A.3.6.23 91.1 0 15 984 0.9858 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.3 The P-type ATPase (P-ATPase) Superfamily
BKIDACHG_00053 2.A.4.4.7 87.1 2.4e-89 1 209 0.9905 0.9905 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.4 The Cation Diffusion Facilitator (CDF) Family