Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2410
  Reference Plasmid   1111525849768046_bin.37__k141_189825
  Reference Plasmid Size   11984
  Reference Plasmid GC Content   0.39
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0123236 HEKEBFMB_00001 206 9 Oral 0.53 protein_coding synonymous_variant LOW 411G>A Arg137Arg
M0123237 HEKEBFMB_00001 215 9 Oral 0.53 protein_coding synonymous_variant LOW 402T>C Ser134Ser
M0123238 HEKEBFMB_00001 323 6 Oral 0.35 protein_coding synonymous_variant LOW 294C>T His98His
M0123239 HEKEBFMB_00001 398 5 Oral 0.29 protein_coding synonymous_variant LOW 219T>C Ser73Ser
M0123240 HEKEBFMB_00001 446 3 Oral 0.18 protein_coding synonymous_variant LOW 171A>T Gly57Gly
M0123241 HEKEBFMB_00001 509 8 Oral 0.47 protein_coding synonymous_variant LOW 108C>T Cys36Cys
M0123242 HEKEBFMB_00002 621 9 Oral 0.53 protein_coding synonymous_variant LOW 321G>A Glu107Glu
M0123243 HEKEBFMB_00002 695 4 Oral 0.24 protein_coding synonymous_variant LOW 247C>A Arg83Arg
M0123244 HEKEBFMB_00002 696 4 Oral 0.24 protein_coding synonymous_variant LOW 246T>C Ala82Ala
M0123245 HEKEBFMB_00002 780 10 Oral 0.59 protein_coding synonymous_variant LOW 162T>C Ile54Ile
M0123246 HEKEBFMB_00002 826 10 Oral 0.59 protein_coding missense_variant MODERATE 116G>A Arg39His
M0123247 HEKEBFMB_00002 834 10 Oral 0.59 protein_coding synonymous_variant LOW 108T>C Ser36Ser
M0123248 HEKEBFMB_00001 1081 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -465T>C None
M0123249 HEKEBFMB_00001 1195 10 Oral 0.59 protein_coding upstream_gene_variant MODIFIER -579T>C None
M0123250 HEKEBFMB_00003 1359 10 Oral 0.59 protein_coding synonymous_variant LOW 117T>C Gly39Gly
M0123251 HEKEBFMB_00003 1446 8 Oral 0.47 protein_coding synonymous_variant LOW 204T>A Ala68Ala
M0123252 HEKEBFMB_00003 1464 5 Oral 0.29 protein_coding synonymous_variant LOW 222C>T Asn74Asn
M0123253 HEKEBFMB_00003 1647 8 Oral 0.47 protein_coding synonymous_variant LOW 405A>T Ala135Ala
M0123254 HEKEBFMB_00003 1788 8 Oral 0.47 protein_coding synonymous_variant LOW 546T>C Gly182Gly
M0123255 HEKEBFMB_00003 1810 9 Oral 0.53 protein_coding synonymous_variant LOW 568T>C Leu190Leu
M0123256 HEKEBFMB_00003 2019 10 Oral 0.59 protein_coding synonymous_variant LOW 777A>T Val259Val
M0123257 HEKEBFMB_00003 2076 10 Oral 0.59 protein_coding synonymous_variant LOW 834T>A Ile278Ile
M0123258 HEKEBFMB_00003 2406 9 Oral 0.53 protein_coding synonymous_variant LOW 1164T>C Asp388Asp
M0123259 HEKEBFMB_00003 2598 10 Oral 0.59 protein_coding missense_variant MODERATE 1356G>C Glu452Asp
M0123260 HEKEBFMB_00003 2628 10 Oral 0.59 protein_coding synonymous_variant LOW 1386T>A Pro462Pro
M0123261 HEKEBFMB_00003 2652 9 Oral 0.53 protein_coding synonymous_variant LOW 1410C>T Ser470Ser
M0123262 HEKEBFMB_00003 2751 8 Oral 0.47 protein_coding synonymous_variant LOW 1509T>C His503His
M0123263 HEKEBFMB_00003 2874 10 Oral 0.59 protein_coding synonymous_variant LOW 1632T>A Ala544Ala
M0123264 HEKEBFMB_00001 3139 7 Oral 0.41 protein_coding upstream_gene_variant MODIFIER -2523A>G None
M0123265 HEKEBFMB_00004 3159 10 Oral 0.59 protein_coding missense_variant MODERATE 2237G>T Trp746Leu
M0123266 HEKEBFMB_00004 3197 5 Oral 0.29 protein_coding synonymous_variant LOW 2199A>T Val733Val
M0123267 HEKEBFMB_00004 3233 5 Oral 0.29 protein_coding synonymous_variant LOW 2163G>A Pro721Pro
M0123268 HEKEBFMB_00004 3236 5 Oral 0.29 protein_coding synonymous_variant LOW 2160C>T Thr720Thr
M0123269 HEKEBFMB_00004 3242 5 Oral 0.29 protein_coding missense_variant MODERATE 2154C>G Asp718Glu
M0123270 HEKEBFMB_00004 4151 7 Oral 0.41 protein_coding synonymous_variant LOW 1245T>C Ser415Ser
M0123271 HEKEBFMB_00004 4253 3 Oral 0.18 protein_coding synonymous_variant LOW 1143C>T Ser381Ser
M0123272 HEKEBFMB_00004 4295 9 Oral 0.53 protein_coding synonymous_variant LOW 1101A>C Ala367Ala
M0123273 HEKEBFMB_00004 4460 5 Oral 0.29 protein_coding synonymous_variant LOW 936A>G Ala312Ala
M0123274 HEKEBFMB_00004 4499 7 Oral 0.41 protein_coding synonymous_variant LOW 897A>T Pro299Pro
M0123275 HEKEBFMB_00004 4605 6 Oral 0.35 protein_coding missense_variant MODERATE 791A>G Lys264Arg
M0123276 HEKEBFMB_00004 4607 8 Oral 0.47 protein_coding synonymous_variant LOW 789T>C His263His
M0123277 HEKEBFMB_00004 4610 3 Oral 0.18 protein_coding synonymous_variant LOW 786A>T Val262Val
M0123278 HEKEBFMB_00004 4673 3 Oral 0.18 protein_coding synonymous_variant LOW 723G>A Val241Val
M0123279 HEKEBFMB_00004 4682 9 Oral 0.53 protein_coding synonymous_variant LOW 714A>G Ser238Ser
M0123280 HEKEBFMB_00004 4829 7 Oral 0.41 protein_coding synonymous_variant LOW 567G>A Thr189Thr
M0123281 HEKEBFMB_00004 4841 4 Oral 0.24 protein_coding synonymous_variant LOW 555C>T Leu185Leu
M0123282 HEKEBFMB_00004 4865 8 Oral 0.47 protein_coding synonymous_variant LOW 531T>C Gly177Gly
M0123283 HEKEBFMB_00004 5023 7 Oral 0.41 protein_coding missense_variant MODERATE 373A>G Ile125Val
M0123284 HEKEBFMB_00004 5060 7 Oral 0.41 protein_coding synonymous_variant LOW 336T>C Phe112Phe
M0123285 HEKEBFMB_00004 5165 7 Oral 0.41 protein_coding synonymous_variant LOW 231T>C Asp77Asp
M0123286 HEKEBFMB_00004 5194 6 Oral 0.35 protein_coding missense_variant MODERATE 202G>A Val68Ile
M0123287 HEKEBFMB_00004 5201 8 Oral 0.47 protein_coding synonymous_variant LOW 195A>T Ile65Ile
M0123288 HEKEBFMB_00004 5316 7 Oral 0.41 protein_coding missense_variant MODERATE 80A>G Tyr27Cys
M0123289 HEKEBFMB_00004 5317 7 Oral 0.41 protein_coding missense_variant MODERATE 79T>C Tyr27His
M0123290 HEKEBFMB_00004 5351 7 Oral 0.41 protein_coding synonymous_variant LOW 45T>A Leu15Leu
M0123291 HEKEBFMB_00004 5354 4 Oral 0.24 protein_coding synonymous_variant LOW 42T>A Ile14Ile
M0123292 HEKEBFMB_00001 5399 7 Oral 0.41 protein_coding upstream_gene_variant MODIFIER -4783G>A None
M0123293 HEKEBFMB_00001 5468 6 Oral 0.35 protein_coding upstream_gene_variant MODIFIER -4852C>T None
M0123294 HEKEBFMB_00001 5526 5 Oral 0.29 protein_coding upstream_gene_variant MODIFIER -4910A>G None
M0123295 HEKEBFMB_00001 5544 7 Oral 0.41 protein_coding upstream_gene_variant MODIFIER -4928G>A None
M0123296 HEKEBFMB_00005 5603 5 Oral 0.29 protein_coding missense_variant MODERATE 1179G>T Glu393Asp
M0123297 HEKEBFMB_00005 5711 4 Oral 0.24 protein_coding synonymous_variant LOW 1071A>G Ala357Ala
M0123298 HEKEBFMB_00005 5789 6 Oral 0.35 protein_coding synonymous_variant LOW 993C>T Ile331Ile
M0123299 HEKEBFMB_00005 5841 3 Oral 0.18 protein_coding missense_variant MODERATE 941G>A Ser314Asn
M0123300 HEKEBFMB_00005 5846 5 Oral 0.29 protein_coding synonymous_variant LOW 936C>T Ala312Ala
M0123301 HEKEBFMB_00005 6077 7 Oral 0.41 protein_coding synonymous_variant LOW 705C>T Thr235Thr
M0123302 HEKEBFMB_00005 6317 8 Oral 0.47 protein_coding missense_variant MODERATE 465G>T Glu155Asp
M0123303 HEKEBFMB_00005 6362 8 Oral 0.47 protein_coding synonymous_variant LOW 420A>G Lys140Lys
M0123304 HEKEBFMB_00005 6473 6 Oral 0.35 protein_coding synonymous_variant LOW 309A>T Thr103Thr
M0123305 HEKEBFMB_00005 6500 6 Oral 0.35 protein_coding synonymous_variant LOW 282T>C Ile94Ile
M0123306 HEKEBFMB_00005 6521 7 Oral 0.41 protein_coding synonymous_variant LOW 261A>T Ala87Ala
M0123307 HEKEBFMB_00005 6614 6 Oral 0.35 protein_coding synonymous_variant LOW 168T>C Tyr56Tyr
M0123308 HEKEBFMB_00004 6948 5 Oral 0.29 protein_coding upstream_gene_variant MODIFIER -1553A>T None
M0123309 HEKEBFMB_00004 6986 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -1591G>T None
M0123310 HEKEBFMB_00006 7099 7 Oral 0.41 protein_coding synonymous_variant LOW 99A>G Leu33Leu
M0123311 HEKEBFMB_00006 7147 5 Oral 0.29 protein_coding synonymous_variant LOW 147T>C Val49Val
M0123312 HEKEBFMB_00006 7182 7 Oral 0.41 protein_coding missense_variant MODERATE 182A>G Glu61Gly
M0123313 HEKEBFMB_00006 7411 5 Oral 0.29 protein_coding synonymous_variant LOW 411T>A Ala137Ala
M0123314 HEKEBFMB_00007 7773 6 Oral 0.35 protein_coding synonymous_variant LOW 33C>T Asp11Asp
M0123315 HEKEBFMB_00007 7791 6 Oral 0.35 protein_coding synonymous_variant LOW 51A>G Glu17Glu
M0123316 HEKEBFMB_00007 7824 6 Oral 0.35 protein_coding synonymous_variant LOW 84T>C Phe28Phe
M0123317 HEKEBFMB_00007 7899 5 Oral 0.29 protein_coding synonymous_variant LOW 159T>C Leu53Leu
M0123318 HEKEBFMB_00007 7918 5 Oral 0.29 protein_coding missense_variant MODERATE 178A>G Met60Val
M0123319 HEKEBFMB_00007 7950 5 Oral 0.29 protein_coding synonymous_variant LOW 210T>C Ala70Ala
M0123320 HEKEBFMB_00007 7998 3 Oral 0.18 protein_coding synonymous_variant LOW 258A>C Ala86Ala
M0123321 HEKEBFMB_00007 8064 3 Oral 0.18 protein_coding synonymous_variant LOW 324A>G Ala108Ala
M0123322 HEKEBFMB_00007 8127 3 Oral 0.18 protein_coding synonymous_variant LOW 387G>A Lys129Lys
M0123323 HEKEBFMB_00007 8202 5 Oral 0.29 protein_coding synonymous_variant LOW 462C>T Asn154Asn
M0123324 HEKEBFMB_00004 8302 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -2907A>G None
M0123325 HEKEBFMB_00004 8308 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -2913C>T None
M0123326 HEKEBFMB_00004 8328 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -2933T>C None
M0123327 HEKEBFMB_00004 8331 5 Oral 0.29 protein_coding upstream_gene_variant MODIFIER -2936G>A None
M0123328 HEKEBFMB_00004 8349 5 Oral 0.29 protein_coding upstream_gene_variant MODIFIER -2954C>T None
M0123329 HEKEBFMB_00004 8374 6 Oral 0.35 protein_coding upstream_gene_variant MODIFIER -2979C>T None
M0123330 HEKEBFMB_00009 8797 8 Oral 0.47 protein_coding synonymous_variant LOW 177A>G Leu59Leu
M0123331 HEKEBFMB_00009 8827 6 Oral 0.35 protein_coding synonymous_variant LOW 207T>C Pro69Pro
M0123332 HEKEBFMB_00009 8839 5 Oral 0.29 protein_coding synonymous_variant LOW 219A>G Leu73Leu
M0123333 HEKEBFMB_00009 8848 3 Oral 0.18 protein_coding synonymous_variant LOW 228A>G Ala76Ala
M0123334 HEKEBFMB_00009 8869 3 Oral 0.18 protein_coding synonymous_variant LOW 249G>A Ser83Ser
M0123335 HEKEBFMB_00009 8875 4 Oral 0.24 protein_coding synonymous_variant LOW 255A>G Ala85Ala
M0123336 HEKEBFMB_00009 8929 8 Oral 0.47 protein_coding synonymous_variant LOW 309T>C Ile103Ile
M0123337 HEKEBFMB_00009 9025 3 Oral 0.18 protein_coding missense_variant MODERATE 405A>T Glu135Asp
M0123338 HEKEBFMB_00009 9120 4 Oral 0.24 protein_coding missense_variant MODERATE 500A>G Asp167Gly
M0123339 HEKEBFMB_00009 9121 3 Oral 0.18 protein_coding synonymous_variant LOW 501C>T Asp167Asp
M0123340 HEKEBFMB_00009 9193 8 Oral 0.47 protein_coding synonymous_variant LOW 573A>G Leu191Leu
M0123341 HEKEBFMB_00009 9211 9 Oral 0.53 protein_coding synonymous_variant LOW 591G>A Glu197Glu
M0123342 HEKEBFMB_00009 9220 7 Oral 0.41 protein_coding synonymous_variant LOW 600C>T Ile200Ile
M0123343 HEKEBFMB_00009 9268 4 Oral 0.24 protein_coding synonymous_variant LOW 648A>G Leu216Leu
M0123344 HEKEBFMB_00009 9301 7 Oral 0.41 protein_coding synonymous_variant LOW 681A>T Pro227Pro
M0123345 HEKEBFMB_00009 9478 6 Oral 0.35 protein_coding missense_variant MODERATE 858G>C Glu286Asp
M0123346 HEKEBFMB_00009 9499 7 Oral 0.41 protein_coding synonymous_variant LOW 879A>G Leu293Leu
M0123347 HEKEBFMB_00004 9659 7 Oral 0.41 protein_coding upstream_gene_variant MODIFIER -4264T>C None
M0123348 HEKEBFMB_00004 9660 8 Oral 0.47 protein_coding upstream_gene_variant MODIFIER -4265C>T None
M0123349 HEKEBFMB_00004 9752 6 Oral 0.35 protein_coding upstream_gene_variant MODIFIER -4357G>A None
M0123350 HEKEBFMB_00004 9776 8 Oral 0.47 protein_coding upstream_gene_variant MODIFIER -4381C>G None
M0123351 HEKEBFMB_00010 9823 3 Oral 0.18 protein_coding synonymous_variant LOW 1744C>T Leu582Leu
M0123352 HEKEBFMB_00010 9876 3 Oral 0.18 protein_coding missense_variant MODERATE 1691G>C Ser564Thr
M0123353 HEKEBFMB_00010 9992 4 Oral 0.24 protein_coding synonymous_variant LOW 1575T>C Thr525Thr
M0123354 HEKEBFMB_00010 10073 9 Oral 0.53 protein_coding synonymous_variant LOW 1494T>A Ala498Ala
M0123355 HEKEBFMB_00010 10076 9 Oral 0.53 protein_coding missense_variant MODERATE 1491A>G Ile497Met
M0123356 HEKEBFMB_00010 10088 8 Oral 0.47 protein_coding missense_variant MODERATE 1479A>T Lys493Asn
M0123357 HEKEBFMB_00010 10092 8 Oral 0.47 protein_coding missense_variant MODERATE 1475A>C Gln492Pro
M0123358 HEKEBFMB_00010 10112 4 Oral 0.24 protein_coding synonymous_variant LOW 1455G>A Ser485Ser
M0123359 HEKEBFMB_00010 10280 5 Oral 0.29 protein_coding synonymous_variant LOW 1287C>T Ala429Ala
M0123360 HEKEBFMB_00010 10283 8 Oral 0.47 protein_coding synonymous_variant LOW 1284A>G Lys428Lys
M0123361 HEKEBFMB_00010 10346 3 Oral 0.18 protein_coding synonymous_variant LOW 1221A>G Ala407Ala
M0123362 HEKEBFMB_00010 10353 3 Oral 0.18 protein_coding missense_variant MODERATE 1214A>C Gln405Pro
M0123363 HEKEBFMB_00010 10487 8 Oral 0.47 protein_coding synonymous_variant LOW 1080A>G Ala360Ala
M0123364 HEKEBFMB_00010 10507 8 Oral 0.47 protein_coding synonymous_variant LOW 1060T>C Leu354Leu
M0123365 HEKEBFMB_00010 10529 8 Oral 0.47 protein_coding synonymous_variant LOW 1038T>C Ser346Ser
M0123366 HEKEBFMB_00010 10538 7 Oral 0.41 protein_coding synonymous_variant LOW 1029G>A Lys343Lys
M0123367 HEKEBFMB_00010 10652 4 Oral 0.24 protein_coding synonymous_variant LOW 915C>A Leu305Leu
M0123368 HEKEBFMB_00010 10697 6 Oral 0.35 protein_coding synonymous_variant LOW 870T>C His290His
M0123369 HEKEBFMB_00010 10733 4 Oral 0.24 protein_coding synonymous_variant LOW 834T>C Phe278Phe
M0123370 HEKEBFMB_00010 10736 4 Oral 0.24 protein_coding synonymous_variant LOW 831C>A Gly277Gly
M0123371 HEKEBFMB_00010 10769 7 Oral 0.41 protein_coding synonymous_variant LOW 798A>G Leu266Leu
M0123372 HEKEBFMB_00010 10790 3 Oral 0.18 protein_coding synonymous_variant LOW 777T>C Leu259Leu
M0123373 HEKEBFMB_00010 10808 6 Oral 0.35 protein_coding synonymous_variant LOW 759G>A Lys253Lys
M0123374 HEKEBFMB_00010 10871 8 Oral 0.47 protein_coding synonymous_variant LOW 696T>C Gly232Gly
M0123375 HEKEBFMB_00010 10895 6 Oral 0.35 protein_coding synonymous_variant LOW 672T>C Asp224Asp
M0123376 HEKEBFMB_00010 11015 6 Oral 0.35 protein_coding synonymous_variant LOW 552T>C Asp184Asp
M0123377 HEKEBFMB_00010 11207 7 Oral 0.41 protein_coding synonymous_variant LOW 360A>T Gly120Gly
M0123378 HEKEBFMB_00010 11234 7 Oral 0.41 protein_coding synonymous_variant LOW 333A>G Glu111Glu
M0123379 HEKEBFMB_00010 11267 7 Oral 0.41 protein_coding synonymous_variant LOW 300C>T Asn100Asn
M0123380 HEKEBFMB_00010 11276 4 Oral 0.24 protein_coding synonymous_variant LOW 291T>G Ala97Ala
M0123381 HEKEBFMB_00010 11288 4 Oral 0.24 protein_coding synonymous_variant LOW 279C>T Phe93Phe
M0123382 HEKEBFMB_00010 11359 4 Oral 0.24 protein_coding missense_variant MODERATE 208C>G Pro70Ala
M0123383 HEKEBFMB_00010 11411 8 Oral 0.47 protein_coding synonymous_variant LOW 156A>G Lys52Lys
M0123384 HEKEBFMB_00005 11685 5 Oral 0.29 protein_coding upstream_gene_variant MODIFIER -4904C>A None
M0123385 HEKEBFMB_00010 11790 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -224C>T None
M0123386 HEKEBFMB_00010 11904 6 Oral 0.35 protein_coding upstream_gene_variant MODIFIER -338A>G None
M0123387 HEKEBFMB_00001 5546 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -4930G>A None
M0123388 HEKEBFMB_00001 5555 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -4939T>C None
M0123389 HEKEBFMB_00005 5636 4 Oral 0.24 protein_coding synonymous_variant LOW 1146C>T Thr382Thr
M0123390 HEKEBFMB_00005 5642 4 Oral 0.24 protein_coding synonymous_variant LOW 1140C>T His380His
M0123391 HEKEBFMB_00005 5648 4 Oral 0.24 protein_coding synonymous_variant LOW 1134C>T Gly378Gly
M0123392 HEKEBFMB_00005 5669 4 Oral 0.24 protein_coding synonymous_variant LOW 1113A>T Ala371Ala
M0123393 HEKEBFMB_00005 5681 4 Oral 0.24 protein_coding synonymous_variant LOW 1101C>A Pro367Pro
M0123394 HEKEBFMB_00005 5693 4 Oral 0.24 protein_coding synonymous_variant LOW 1089A>T Gly363Gly
M0123395 HEKEBFMB_00005 6269 5 Oral 0.29 protein_coding synonymous_variant LOW 513T>C Asp171Asp
M0123396 HEKEBFMB_00005 6293 6 Oral 0.35 protein_coding synonymous_variant LOW 489T>C Asp163Asp
M0123397 HEKEBFMB_00005 6314 6 Oral 0.35 protein_coding synonymous_variant LOW 468C>T His156His
M0123398 HEKEBFMB_00005 6392 4 Oral 0.24 protein_coding synonymous_variant LOW 390C>T Asp130Asp
M0123399 HEKEBFMB_00005 6422 6 Oral 0.35 protein_coding synonymous_variant LOW 360G>A Ala120Ala
M0123400 HEKEBFMB_00005 6707 5 Oral 0.29 protein_coding synonymous_variant LOW 75C>T Pro25Pro
M0123401 HEKEBFMB_00001 365 3 Oral 0.18 protein_coding synonymous_variant LOW 252A>T Val84Val
M0123402 HEKEBFMB_00001 449 7 Oral 0.41 protein_coding synonymous_variant LOW 168A>G Gln56Gln
M0123403 HEKEBFMB_00001 476 5 Oral 0.29 protein_coding synonymous_variant LOW 141A>C Thr47Thr
M0123404 HEKEBFMB_00002 753 9 Oral 0.53 protein_coding synonymous_variant LOW 189G>A Glu63Glu
M0123405 HEKEBFMB_00002 813 6 Oral 0.35 protein_coding synonymous_variant LOW 129T>C Leu43Leu
M0123406 HEKEBFMB_00002 821 6 Oral 0.35 protein_coding missense_variant MODERATE 121G>A Val41Ile
M0123407 HEKEBFMB_00002 878 9 Oral 0.53 protein_coding missense_variant MODERATE 64T>C Phe22Leu
M0123408 HEKEBFMB_00001 1242 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -626A>G None
M0123409 HEKEBFMB_00003 1272 6 Oral 0.35 protein_coding synonymous_variant LOW 30T>A Val10Val
M0123410 HEKEBFMB_00003 1323 3 Oral 0.18 protein_coding synonymous_variant LOW 81G>A Gln27Gln
M0123411 HEKEBFMB_00003 1581 3 Oral 0.18 protein_coding synonymous_variant LOW 339C>T Asp113Asp
M0123412 HEKEBFMB_00003 2355 4 Oral 0.24 protein_coding synonymous_variant LOW 1113G>A Leu371Leu
M0123413 HEKEBFMB_00003 2430 7 Oral 0.41 protein_coding synonymous_variant LOW 1188C>T Leu396Leu
M0123414 HEKEBFMB_00003 2793 3 Oral 0.18 protein_coding synonymous_variant LOW 1551G>A Val517Val
M0123415 HEKEBFMB_00003 3007 3 Oral 0.18 protein_coding missense_variant MODERATE 1765C>T Pro589Ser
M0123416 HEKEBFMB_00001 3049 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -2433G>C None
M0123417 HEKEBFMB_00001 3051 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -2435G>A None
M0123418 HEKEBFMB_00004 3383 8 Oral 0.47 protein_coding synonymous_variant LOW 2013G>A Leu671Leu
M0123419 HEKEBFMB_00004 3397 5 Oral 0.29 protein_coding missense_variant MODERATE 1999C>G Leu667Val
M0123420 HEKEBFMB_00004 3428 6 Oral 0.35 protein_coding missense_variant MODERATE 1968G>T Met656Ile
M0123421 HEKEBFMB_00004 3429 6 Oral 0.35 protein_coding missense_variant MODERATE 1967T>C Met656Thr
M0123422 HEKEBFMB_00004 3440 6 Oral 0.35 protein_coding synonymous_variant LOW 1956T>C Asp652Asp
M0123423 HEKEBFMB_00004 3443 6 Oral 0.35 protein_coding synonymous_variant LOW 1953T>C Ser651Ser
M0123424 HEKEBFMB_00004 3487 4 Oral 0.24 protein_coding missense_variant MODERATE 1909T>G Ser637Ala
M0123425 HEKEBFMB_00004 3503 4 Oral 0.24 protein_coding missense_variant MODERATE 1893C>G Ile631Met
M0123426 HEKEBFMB_00004 3505 4 Oral 0.24 protein_coding missense_variant MODERATE 1891A>T Ile631Phe
M0123427 HEKEBFMB_00004 3506 4 Oral 0.24 protein_coding synonymous_variant LOW 1890T>A Arg630Arg
M0123428 HEKEBFMB_00004 3521 4 Oral 0.24 protein_coding synonymous_variant LOW 1875G>A Leu625Leu
M0123429 HEKEBFMB_00004 3524 4 Oral 0.24 protein_coding synonymous_variant LOW 1872T>C Ile624Ile
M0123430 HEKEBFMB_00004 3569 4 Oral 0.24 protein_coding synonymous_variant LOW 1827G>A Glu609Glu
M0123431 HEKEBFMB_00004 3620 4 Oral 0.24 protein_coding synonymous_variant LOW 1776C>T Ile592Ile
M0123432 HEKEBFMB_00004 3629 5 Oral 0.29 protein_coding synonymous_variant LOW 1767C>T Asp589Asp
M0123433 HEKEBFMB_00004 3695 4 Oral 0.24 protein_coding synonymous_variant LOW 1701A>G Arg567Arg
M0123434 HEKEBFMB_00004 3836 5 Oral 0.29 protein_coding synonymous_variant LOW 1560C>A Ile520Ile
M0123435 HEKEBFMB_00004 3911 5 Oral 0.29 protein_coding synonymous_variant LOW 1485C>T Ser495Ser
M0123436 HEKEBFMB_00004 3926 4 Oral 0.24 protein_coding synonymous_variant LOW 1470A>G Val490Val
M0123437 HEKEBFMB_00004 4040 4 Oral 0.24 protein_coding synonymous_variant LOW 1356C>T Ser452Ser
M0123438 HEKEBFMB_00004 4041 4 Oral 0.24 protein_coding missense_variant MODERATE 1355G>C Ser452Thr
M0123439 HEKEBFMB_00004 4042 4 Oral 0.24 protein_coding missense_variant MODERATE 1354A>T Ser452Cys
M0123440 HEKEBFMB_00004 4049 5 Oral 0.29 protein_coding synonymous_variant LOW 1347T>C Phe449Phe
M0123441 HEKEBFMB_00004 4053 5 Oral 0.29 protein_coding missense_variant MODERATE 1343T>C Leu448Pro
M0123442 HEKEBFMB_00004 4084 6 Oral 0.35 protein_coding missense_variant MODERATE 1312A>G Ile438Val
M0123443 HEKEBFMB_00004 4157 5 Oral 0.29 protein_coding synonymous_variant LOW 1239G>A Ser413Ser
M0123444 HEKEBFMB_00004 4220 4 Oral 0.24 protein_coding synonymous_variant LOW 1176G>T Val392Val
M0123445 HEKEBFMB_00004 4243 5 Oral 0.29 protein_coding missense_variant MODERATE 1153C>G Leu385Val
M0123446 HEKEBFMB_00004 4256 3 Oral 0.18 protein_coding synonymous_variant LOW 1140G>A Lys380Lys
M0123447 HEKEBFMB_00004 4262 7 Oral 0.41 protein_coding synonymous_variant LOW 1134G>C Val378Val
M0123448 HEKEBFMB_00004 4292 3 Oral 0.18 protein_coding synonymous_variant LOW 1104G>A Ser368Ser
M0123449 HEKEBFMB_00004 4298 5 Oral 0.29 protein_coding synonymous_variant LOW 1098T>A Ala366Ala
M0123450 HEKEBFMB_00004 4331 7 Oral 0.41 protein_coding synonymous_variant LOW 1065T>C Val355Val
M0123451 HEKEBFMB_00004 4361 4 Oral 0.24 protein_coding synonymous_variant LOW 1035C>T Ile345Ile
M0123452 HEKEBFMB_00004 4382 6 Oral 0.35 protein_coding synonymous_variant LOW 1014A>G Gln338Gln
M0123453 HEKEBFMB_00004 4463 3 Oral 0.18 protein_coding synonymous_variant LOW 933A>G Gln311Gln
M0123454 HEKEBFMB_00004 4492 3 Oral 0.18 protein_coding missense_variant MODERATE 904A>G Ser302Gly
M0123455 HEKEBFMB_00004 4565 4 Oral 0.24 protein_coding synonymous_variant LOW 831A>T Gly277Gly
M0123456 HEKEBFMB_00004 4571 4 Oral 0.24 protein_coding synonymous_variant LOW 825T>A Leu275Leu
M0123457 HEKEBFMB_00004 4574 3 Oral 0.18 protein_coding synonymous_variant LOW 822C>T Asp274Asp
M0123458 HEKEBFMB_00004 4583 5 Oral 0.29 protein_coding synonymous_variant LOW 813T>A Pro271Pro
M0123459 HEKEBFMB_00004 4604 5 Oral 0.29 protein_coding synonymous_variant LOW 792G>A Lys264Lys
M0123460 HEKEBFMB_00004 4625 6 Oral 0.35 protein_coding synonymous_variant LOW 771A>C Ala257Ala
M0123461 HEKEBFMB_00004 4628 4 Oral 0.24 protein_coding synonymous_variant LOW 768G>A Leu256Leu
M0123462 HEKEBFMB_00004 4747 4 Oral 0.24 protein_coding missense_variant MODERATE 649A>C Ile217Leu
M0123463 HEKEBFMB_00004 4832 3 Oral 0.18 protein_coding synonymous_variant LOW 564C>A Ile188Ile
M0123464 HEKEBFMB_00004 4850 5 Oral 0.29 protein_coding synonymous_variant LOW 546T>A Ser182Ser
M0123465 HEKEBFMB_00004 4868 5 Oral 0.29 protein_coding synonymous_variant LOW 528G>A Gly176Gly
M0123466 HEKEBFMB_00004 4910 5 Oral 0.29 protein_coding synonymous_variant LOW 486A>G Val162Val
M0123467 HEKEBFMB_00004 4913 5 Oral 0.29 protein_coding synonymous_variant LOW 483T>C Asp161Asp
M0123468 HEKEBFMB_00004 4919 3 Oral 0.18 protein_coding synonymous_variant LOW 477C>T Ile159Ile
M0123469 HEKEBFMB_00004 4940 3 Oral 0.18 protein_coding synonymous_variant LOW 456G>A Leu152Leu
M0123470 HEKEBFMB_00004 4991 6 Oral 0.35 protein_coding synonymous_variant LOW 405A>G Val135Val
M0123471 HEKEBFMB_00004 5084 5 Oral 0.29 protein_coding synonymous_variant LOW 312C>T Ile104Ile
M0123472 HEKEBFMB_00004 5108 3 Oral 0.18 protein_coding synonymous_variant LOW 288T>C Gly96Gly
M0123473 HEKEBFMB_00004 5111 4 Oral 0.24 protein_coding synonymous_variant LOW 285G>A Leu95Leu
M0123474 HEKEBFMB_00004 5192 5 Oral 0.29 protein_coding synonymous_variant LOW 204T>A Val68Val
M0123475 HEKEBFMB_00004 5222 7 Oral 0.41 protein_coding synonymous_variant LOW 174C>T Asp58Asp
M0123476 HEKEBFMB_00004 5231 4 Oral 0.24 protein_coding synonymous_variant LOW 165T>C Asp55Asp
M0123477 HEKEBFMB_00004 5243 3 Oral 0.18 protein_coding synonymous_variant LOW 153C>T Pro51Pro
M0123478 HEKEBFMB_00004 5246 4 Oral 0.24 protein_coding synonymous_variant LOW 150T>C Thr50Thr
M0123479 HEKEBFMB_00004 5339 6 Oral 0.35 protein_coding synonymous_variant LOW 57C>T Gly19Gly
M0123480 HEKEBFMB_00001 5396 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4780A>G None
M0123481 HEKEBFMB_00005 5837 3 Oral 0.18 protein_coding synonymous_variant LOW 945T>C Asp315Asp
M0123482 HEKEBFMB_00005 5843 4 Oral 0.24 protein_coding synonymous_variant LOW 939T>C Ile313Ile
M0123483 HEKEBFMB_00005 5910 4 Oral 0.24 protein_coding missense_variant MODERATE 872G>A Ser291Asn
M0123484 HEKEBFMB_00005 6011 3 Oral 0.18 protein_coding synonymous_variant LOW 771A>G Glu257Glu
M0123485 HEKEBFMB_00005 6182 3 Oral 0.18 protein_coding synonymous_variant LOW 600C>T Gly200Gly
M0123486 HEKEBFMB_00005 6194 4 Oral 0.24 protein_coding synonymous_variant LOW 588C>T Gly196Gly
M0123487 HEKEBFMB_00005 6245 4 Oral 0.24 protein_coding synonymous_variant LOW 537T>C His179His
M0123488 HEKEBFMB_00005 6248 4 Oral 0.24 protein_coding synonymous_variant LOW 534G>A Ala178Ala
M0123489 HEKEBFMB_00005 6524 3 Oral 0.18 protein_coding synonymous_variant LOW 258T>C Gly86Gly
M0123490 HEKEBFMB_00005 6545 3 Oral 0.18 protein_coding synonymous_variant LOW 237C>T Asp79Asp
M0123491 HEKEBFMB_00004 6933 4 Oral 0.24 protein_coding upstream_gene_variant MODIFIER -1538A>C None
M0123492 HEKEBFMB_00004 6937 5 Oral 0.29 protein_coding upstream_gene_variant MODIFIER -1542T>C None
M0123493 HEKEBFMB_00004 6940 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -1545T>C None
M0123494 HEKEBFMB_00006 7069 6 Oral 0.35 protein_coding synonymous_variant LOW 69C>A Pro23Pro
M0123495 HEKEBFMB_00006 7162 5 Oral 0.29 protein_coding synonymous_variant LOW 162G>A Ser54Ser
M0123496 HEKEBFMB_00006 7174 4 Oral 0.24 protein_coding synonymous_variant LOW 174C>T Tyr58Tyr
M0123497 HEKEBFMB_00006 7315 3 Oral 0.18 protein_coding synonymous_variant LOW 315A>T Ala105Ala
M0123498 HEKEBFMB_00006 7318 3 Oral 0.18 protein_coding synonymous_variant LOW 318T>C Leu106Leu
M0123499 HEKEBFMB_00006 7327 3 Oral 0.18 protein_coding synonymous_variant LOW 327C>A Ala109Ala
M0123500 HEKEBFMB_00006 7336 3 Oral 0.18 protein_coding synonymous_variant LOW 336A>G Ser112Ser
M0123501 HEKEBFMB_00006 7372 4 Oral 0.24 protein_coding synonymous_variant LOW 372T>C Val124Val
M0123502 HEKEBFMB_00006 7567 5 Oral 0.29 protein_coding synonymous_variant LOW 567A>G Leu189Leu
M0123503 HEKEBFMB_00006 7606 5 Oral 0.29 protein_coding synonymous_variant LOW 606T>C Ser202Ser
M0123504 HEKEBFMB_00006 7656 4 Oral 0.24 protein_coding missense_variant MODERATE 656A>G Asn219Ser
M0123505 HEKEBFMB_00006 7660 4 Oral 0.24 protein_coding synonymous_variant LOW 660A>T Ile220Ile
M0123506 HEKEBFMB_00007 7947 4 Oral 0.24 protein_coding synonymous_variant LOW 207T>A Ala69Ala
M0123507 HEKEBFMB_00007 8079 4 Oral 0.24 protein_coding synonymous_variant LOW 339T>C Ala113Ala
M0123508 HEKEBFMB_00004 8291 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -2896A>T None
M0123509 HEKEBFMB_00004 8409 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -3014G>A None
M0123510 HEKEBFMB_00009 8665 3 Oral 0.18 protein_coding synonymous_variant LOW 45T>C Asn15Asn
M0123511 HEKEBFMB_00009 8833 4 Oral 0.24 protein_coding synonymous_variant LOW 213G>A Lys71Lys
M0123512 HEKEBFMB_00009 8845 4 Oral 0.24 protein_coding synonymous_variant LOW 225T>C Asp75Asp
M0123513 HEKEBFMB_00009 8920 4 Oral 0.24 protein_coding synonymous_variant LOW 300A>T Gly100Gly
M0123514 HEKEBFMB_00009 9067 3 Oral 0.18 protein_coding synonymous_variant LOW 447C>T Arg149Arg
M0123515 HEKEBFMB_00009 9112 3 Oral 0.18 protein_coding synonymous_variant LOW 492C>A Thr164Thr
M0123516 HEKEBFMB_00009 9460 4 Oral 0.24 protein_coding missense_variant MODERATE 840T>A Asp280Glu
M0123517 HEKEBFMB_00004 9675 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4280G>A None
M0123518 HEKEBFMB_00004 9676 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4281T>G None
M0123519 HEKEBFMB_00004 9678 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4283T>A None
M0123520 HEKEBFMB_00004 9680 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4285C>A None
M0123521 HEKEBFMB_00004 9681 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4286T>C None
M0123522 HEKEBFMB_00010 10093 3 Oral 0.18 protein_coding stop_gained HIGH 1474C>T Gln492*
M0123523 HEKEBFMB_00010 10133 3 Oral 0.18 protein_coding synonymous_variant LOW 1434T>C Asp478Asp
M0123524 HEKEBFMB_00010 10145 3 Oral 0.18 protein_coding synonymous_variant LOW 1422C>T Phe474Phe
M0123525 HEKEBFMB_00010 10520 3 Oral 0.18 protein_coding synonymous_variant LOW 1047C>T Ala349Ala
M0123526 HEKEBFMB_00010 10631 7 Oral 0.41 protein_coding synonymous_variant LOW 936G>A Leu312Leu
M0123527 HEKEBFMB_00010 10916 3 Oral 0.18 protein_coding synonymous_variant LOW 651T>A Arg217Arg
M0123528 HEKEBFMB_00010 11108 5 Oral 0.29 protein_coding synonymous_variant LOW 459T>C Ile153Ile
M0123529 HEKEBFMB_00010 11135 5 Oral 0.29 protein_coding synonymous_variant LOW 432G>A Thr144Thr
M0123530 HEKEBFMB_00010 11228 3 Oral 0.18 protein_coding synonymous_variant LOW 339A>C Thr113Thr
M0123531 HEKEBFMB_00010 11916 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -350G>A None
M0123532 HEKEBFMB_00002 741 3 Oral 0.18 protein_coding synonymous_variant LOW 201A>G Arg67Arg
M0123533 HEKEBFMB_00001 1000 5 Oral 0.29 protein_coding upstream_gene_variant MODIFIER -384C>G None
M0123534 HEKEBFMB_00003 2473 5 Oral 0.29 protein_coding missense_variant MODERATE 1231A>G Ile411Val
M0123535 HEKEBFMB_00004 3200 4 Oral 0.24 protein_coding synonymous_variant LOW 2196C>T Asp732Asp
M0123536 HEKEBFMB_00004 3284 5 Oral 0.29 protein_coding synonymous_variant LOW 2112A>T Arg704Arg
M0123537 HEKEBFMB_00004 3335 3 Oral 0.18 protein_coding synonymous_variant LOW 2061G>A Lys687Lys
M0123538 HEKEBFMB_00004 3370 4 Oral 0.24 protein_coding synonymous_variant LOW 2026C>A Arg676Arg
M0123539 HEKEBFMB_00004 3646 3 Oral 0.18 protein_coding missense_variant MODERATE 1750A>C Asn584His
M0123540 HEKEBFMB_00004 3647 3 Oral 0.18 protein_coding synonymous_variant LOW 1749T>C Arg583Arg
M0123541 HEKEBFMB_00004 3662 5 Oral 0.29 protein_coding synonymous_variant LOW 1734G>A Lys578Lys
M0123542 HEKEBFMB_00004 3665 3 Oral 0.18 protein_coding synonymous_variant LOW 1731C>T Asn577Asn
M0123543 HEKEBFMB_00004 3668 3 Oral 0.18 protein_coding synonymous_variant LOW 1728C>T His576His
M0123544 HEKEBFMB_00004 3671 7 Oral 0.41 protein_coding synonymous_variant LOW 1725G>T Gly575Gly
M0123545 HEKEBFMB_00004 3677 4 Oral 0.24 protein_coding synonymous_variant LOW 1719G>A Val573Val
M0123546 HEKEBFMB_00004 3737 4 Oral 0.24 protein_coding synonymous_variant LOW 1659G>A Thr553Thr
M0123547 HEKEBFMB_00004 4028 4 Oral 0.24 protein_coding synonymous_variant LOW 1368C>T His456His
M0123548 HEKEBFMB_00004 4736 3 Oral 0.18 protein_coding synonymous_variant LOW 660C>T Asn220Asn
M0123549 HEKEBFMB_00004 5075 3 Oral 0.18 protein_coding synonymous_variant LOW 321G>T Thr107Thr
M0123550 HEKEBFMB_00010 9887 3 Oral 0.18 protein_coding synonymous_variant LOW 1680G>A Lys560Lys
M0123551 HEKEBFMB_00010 9972 5 Oral 0.29 protein_coding missense_variant MODERATE 1595C>T Ala532Val
M0123552 HEKEBFMB_00010 10091 4 Oral 0.24 protein_coding synonymous_variant LOW 1476A>G Gln492Gln
M0123553 HEKEBFMB_00010 11513 3 Oral 0.18 protein_coding synonymous_variant LOW 54A>T Thr18Thr
M0123554 HEKEBFMB_00001 533 5 Oral 0.29 protein_coding synonymous_variant LOW 84C>T Phe28Phe
M0123555 HEKEBFMB_00003 2574 4 Oral 0.24 protein_coding synonymous_variant LOW 1332C>T Asn444Asn
M0123556 HEKEBFMB_00003 2922 3 Oral 0.18 protein_coding synonymous_variant LOW 1680A>T Ala560Ala
M0123557 HEKEBFMB_00003 2931 3 Oral 0.18 protein_coding synonymous_variant LOW 1689A>T Gly563Gly
M0123558 HEKEBFMB_00001 3102 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -2486A>G None
M0123559 HEKEBFMB_00001 3104 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -2488A>G None
M0123560 HEKEBFMB_00001 3123 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -2507A>T None
M0123561 HEKEBFMB_00001 3124 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -2508G>A None
M0123562 HEKEBFMB_00001 5556 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4940A>T None
M0123563 HEKEBFMB_00005 6041 3 Oral 0.18 protein_coding synonymous_variant LOW 741C>T Thr247Thr
M0123564 HEKEBFMB_00010 10991 3 Oral 0.18 protein_coding synonymous_variant LOW 576G>A Val192Val
M0123565 HEKEBFMB_00004 3482 3 Oral 0.18 protein_coding synonymous_variant LOW 1914A>T Thr638Thr
M0123566 HEKEBFMB_00004 4787 3 Oral 0.18 protein_coding synonymous_variant LOW 609C>T Gly203Gly
M0123567 HEKEBFMB_00004 5102 3 Oral 0.18 protein_coding synonymous_variant LOW 294C>T Val98Val
M0123568 HEKEBFMB_00004 5234 3 Oral 0.18 protein_coding synonymous_variant LOW 162T>A Val54Val
M0123569 HEKEBFMB_00001 5431 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4815T>C None
M0123570 HEKEBFMB_00001 5488 3 Oral 0.18 protein_coding upstream_gene_variant MODIFIER -4872A>T None
M0123571 HEKEBFMB_00001 278 4 Oral 0.24 protein_coding synonymous_variant LOW 339A>G Lys113Lys
M0123572 HEKEBFMB_00003 2265 3 Oral 0.18 protein_coding synonymous_variant LOW 1023G>A Lys341Lys






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term