Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2418
  Reference Plasmid   1111525849768046_bin.37__k141_202893
  Reference Plasmid Size   7271
  Reference Plasmid GC Content   0.38
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0123964 FOMBHBCP_00001 21 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *964C>T None
M0123965 FOMBHBCP_00001 35 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *950C>T None
M0123966 FOMBHBCP_00001 40 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *945C>T None
M0123967 FOMBHBCP_00001 41 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *944G>A None
M0123968 FOMBHBCP_00001 50 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *935T>C None
M0123969 FOMBHBCP_00001 53 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *932T>C None
M0123970 FOMBHBCP_00001 58 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *927C>T None
M0123971 FOMBHBCP_00001 95 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *890G>A None
M0123972 FOMBHBCP_00001 119 6 Oral 0.55 protein_coding downstream_gene_variant MODIFIER *866G>A None
M0123973 FOMBHBCP_00001 140 6 Oral 0.55 protein_coding downstream_gene_variant MODIFIER *845C>A None
M0123974 FOMBHBCP_00001 175 8 Oral 0.73 protein_coding downstream_gene_variant MODIFIER *810A>G None
M0123975 FOMBHBCP_00001 203 5 Oral 0.45 protein_coding downstream_gene_variant MODIFIER *782C>T None
M0123976 FOMBHBCP_00001 224 5 Oral 0.45 protein_coding downstream_gene_variant MODIFIER *761T>C None
M0123977 FOMBHBCP_00001 239 6 Oral 0.55 protein_coding downstream_gene_variant MODIFIER *746G>A None
M0123978 FOMBHBCP_00001 242 6 Oral 0.55 protein_coding downstream_gene_variant MODIFIER *743C>T None
M0123979 FOMBHBCP_00001 284 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *701A>C None
M0123980 FOMBHBCP_00001 299 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *686T>A None
M0123981 FOMBHBCP_00001 310 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *675C>T None
M0123982 FOMBHBCP_00001 359 3 Oral 0.27 protein_coding downstream_gene_variant MODIFIER *626G>A None
M0123983 FOMBHBCP_00001 380 8 Oral 0.73 protein_coding downstream_gene_variant MODIFIER *605C>T None
M0123984 FOMBHBCP_00001 397 8 Oral 0.73 protein_coding downstream_gene_variant MODIFIER *588C>A None
M0123985 FOMBHBCP_00001 434 8 Oral 0.73 protein_coding downstream_gene_variant MODIFIER *551T>C None
M0123986 FOMBHBCP_00001 476 5 Oral 0.45 protein_coding downstream_gene_variant MODIFIER *509C>T None
M0123987 FOMBHBCP_00001 509 8 Oral 0.73 protein_coding downstream_gene_variant MODIFIER *476T>C None
M0123988 FOMBHBCP_00001 518 8 Oral 0.73 protein_coding downstream_gene_variant MODIFIER *467C>T None
M0123989 FOMBHBCP_00001 530 8 Oral 0.73 protein_coding downstream_gene_variant MODIFIER *455A>G None
M0123990 FOMBHBCP_00001 575 5 Oral 0.45 protein_coding downstream_gene_variant MODIFIER *410A>G None
M0123991 FOMBHBCP_00001 589 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *396C>G None
M0123992 FOMBHBCP_00001 605 8 Oral 0.73 protein_coding downstream_gene_variant MODIFIER *380C>A None
M0123993 FOMBHBCP_00001 717 9 Oral 0.82 protein_coding downstream_gene_variant MODIFIER *268T>C None
M0123994 FOMBHBCP_00001 909 5 Oral 0.45 protein_coding downstream_gene_variant MODIFIER *76G>A None
M0123995 FOMBHBCP_00001 930 5 Oral 0.45 protein_coding downstream_gene_variant MODIFIER *55G>T None
M0123996 FOMBHBCP_00001 974 5 Oral 0.45 protein_coding downstream_gene_variant MODIFIER *11T>C None
M0123997 FOMBHBCP_00001 1036 4 Oral 0.36 protein_coding synonymous_variant LOW 1878G>A Ala626Ala
M0123998 FOMBHBCP_00001 1192 5 Oral 0.45 protein_coding synonymous_variant LOW 1722T>C Gly574Gly
M0123999 FOMBHBCP_00001 1201 8 Oral 0.73 protein_coding synonymous_variant LOW 1713A>C Ala571Ala
M0124000 FOMBHBCP_00001 1267 8 Oral 0.73 protein_coding synonymous_variant LOW 1647T>A Ile549Ile
M0124001 FOMBHBCP_00001 1321 5 Oral 0.45 protein_coding synonymous_variant LOW 1593T>C Thr531Thr
M0124002 FOMBHBCP_00001 1344 7 Oral 0.64 protein_coding missense_variant MODERATE 1570T>C Ser524Pro
M0124003 FOMBHBCP_00001 1398 7 Oral 0.64 protein_coding synonymous_variant LOW 1516C>T Leu506Leu
M0124004 FOMBHBCP_00001 1414 3 Oral 0.27 protein_coding synonymous_variant LOW 1500A>T Ala500Ala
M0124005 FOMBHBCP_00001 1441 9 Oral 0.82 protein_coding synonymous_variant LOW 1473G>A Glu491Glu
M0124006 FOMBHBCP_00001 1447 8 Oral 0.73 protein_coding synonymous_variant LOW 1467G>A Ser489Ser
M0124007 FOMBHBCP_00001 1522 5 Oral 0.45 protein_coding synonymous_variant LOW 1392A>G Arg464Arg
M0124008 FOMBHBCP_00001 1552 7 Oral 0.64 protein_coding synonymous_variant LOW 1362T>A Ala454Ala
M0124009 FOMBHBCP_00001 1558 7 Oral 0.64 protein_coding synonymous_variant LOW 1356A>T Ser452Ser
M0124010 FOMBHBCP_00001 1564 8 Oral 0.73 protein_coding synonymous_variant LOW 1350A>T Val450Val
M0124011 FOMBHBCP_00001 1630 5 Oral 0.45 protein_coding synonymous_variant LOW 1284A>G Val428Val
M0124012 FOMBHBCP_00001 1648 7 Oral 0.64 protein_coding synonymous_variant LOW 1266T>A Ser422Ser
M0124013 FOMBHBCP_00001 1687 3 Oral 0.27 protein_coding synonymous_variant LOW 1227T>C Phe409Phe
M0124014 FOMBHBCP_00001 1699 3 Oral 0.27 protein_coding synonymous_variant LOW 1215A>G Leu405Leu
M0124015 FOMBHBCP_00001 1774 7 Oral 0.64 protein_coding synonymous_variant LOW 1140C>T Ile380Ile
M0124016 FOMBHBCP_00001 1924 5 Oral 0.45 protein_coding synonymous_variant LOW 990A>C Gly330Gly
M0124017 FOMBHBCP_00001 1947 7 Oral 0.64 protein_coding missense_variant MODERATE 967C>T Arg323Cys
M0124018 FOMBHBCP_00001 1951 6 Oral 0.55 protein_coding synonymous_variant LOW 963A>T Ser321Ser
M0124019 FOMBHBCP_00001 1962 6 Oral 0.55 protein_coding missense_variant MODERATE 952T>A Ser318Thr
M0124020 FOMBHBCP_00001 1978 4 Oral 0.36 protein_coding synonymous_variant LOW 936C>T Phe312Phe
M0124021 FOMBHBCP_00001 2425 3 Oral 0.27 protein_coding synonymous_variant LOW 489T>A Thr163Thr
M0124022 FOMBHBCP_00001 2614 4 Oral 0.36 protein_coding synonymous_variant LOW 300T>C His100His
M0124023 FOMBHBCP_00001 2653 6 Oral 0.55 protein_coding synonymous_variant LOW 261A>G Lys87Lys
M0124024 FOMBHBCP_00001 2818 8 Oral 0.73 protein_coding synonymous_variant LOW 96G>A Glu32Glu
M0124025 FOMBHBCP_00001 2899 3 Oral 0.27 protein_coding synonymous_variant LOW 15T>C Cys5Cys
M0124026 FOMBHBCP_00001 2909 7 Oral 0.64 protein_coding missense_variant MODERATE 5G>T Ser2Ile
M0124027 FOMBHBCP_00001 2941 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -28A>G None
M0124028 FOMBHBCP_00002 3016 5 Oral 0.45 protein_coding synonymous_variant LOW 453A>T Ile151Ile
M0124029 FOMBHBCP_00002 3030 6 Oral 0.55 protein_coding synonymous_variant LOW 439C>T Leu147Leu
M0124030 FOMBHBCP_00002 3358 9 Oral 0.82 protein_coding missense_variant MODERATE 111T>G Phe37Leu
M0124031 FOMBHBCP_00004 5295 4 Oral 0.36 protein_coding synonymous_variant LOW 348A>G Glu116Glu
M0124032 FOMBHBCP_00004 5312 4 Oral 0.36 protein_coding missense_variant MODERATE 331G>A Asp111Asn
M0124033 FOMBHBCP_00004 5325 4 Oral 0.36 protein_coding synonymous_variant LOW 318C>T Gly106Gly
M0124034 FOMBHBCP_00004 5363 4 Oral 0.36 protein_coding missense_variant MODERATE 280T>A Ser94Thr
M0124035 FOMBHBCP_00004 5382 3 Oral 0.27 protein_coding synonymous_variant LOW 261A>T Ala87Ala
M0124036 FOMBHBCP_00004 5505 5 Oral 0.45 protein_coding synonymous_variant LOW 138T>C Asp46Asp
M0124037 FOMBHBCP_00004 5510 6 Oral 0.55 protein_coding missense_variant MODERATE 133A>C Ile45Leu
M0124038 FOMBHBCP_00001 5926 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -3013C>A None
M0124039 FOMBHBCP_00001 5936 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -3023T>G None
M0124040 FOMBHBCP_00001 5958 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -3045G>C None
M0124041 FOMBHBCP_00005 6269 3 Oral 0.27 protein_coding synonymous_variant LOW 111C>T Gly37Gly
M0124042 FOMBHBCP_00005 6296 4 Oral 0.36 protein_coding missense_variant MODERATE 138A>C Glu46Asp
M0124043 FOMBHBCP_00005 6326 3 Oral 0.27 protein_coding synonymous_variant LOW 168G>A Glu56Glu
M0124044 FOMBHBCP_00005 6350 4 Oral 0.36 protein_coding synonymous_variant LOW 192C>A Pro64Pro
M0124045 FOMBHBCP_00005 6404 5 Oral 0.45 protein_coding synonymous_variant LOW 246C>T Pro82Pro
M0124046 FOMBHBCP_00005 6758 3 Oral 0.27 protein_coding synonymous_variant LOW 600T>C His200His
M0124047 FOMBHBCP_00005 6875 7 Oral 0.64 protein_coding synonymous_variant LOW 717T>C Gly239Gly
M0124048 FOMBHBCP_00005 6878 7 Oral 0.64 protein_coding synonymous_variant LOW 720C>T Cys240Cys
M0124049 FOMBHBCP_00005 7112 6 Oral 0.55 protein_coding synonymous_variant LOW 954T>C Ile318Ile
M0124050 FOMBHBCP_00005 7115 6 Oral 0.55 protein_coding synonymous_variant LOW 957G>A Lys319Lys
M0124051 FOMBHBCP_00005 7118 5 Oral 0.45 protein_coding synonymous_variant LOW 960A>G Leu320Leu
M0124052 FOMBHBCP_00001 7178 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -4265C>T None
M0124053 FOMBHBCP_00001 7179 5 Oral 0.45 protein_coding upstream_gene_variant MODIFIER -4266A>G None
M0124054 FOMBHBCP_00001 7195 5 Oral 0.45 protein_coding upstream_gene_variant MODIFIER -4282A>C None
M0124055 FOMBHBCP_00001 7230 5 Oral 0.45 protein_coding upstream_gene_variant MODIFIER -4317G>T None
M0124056 FOMBHBCP_00001 7241 5 Oral 0.45 protein_coding upstream_gene_variant MODIFIER -4328C>G None
M0124057 FOMBHBCP_00001 939 3 Oral 0.27 protein_coding downstream_gene_variant MODIFIER *46G>T None
M0124058 FOMBHBCP_00001 367 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *618A>G None
M0124059 FOMBHBCP_00001 404 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *581T>C None
M0124060 FOMBHBCP_00001 686 4 Oral 0.36 protein_coding downstream_gene_variant MODIFIER *299G>A None
M0124061 FOMBHBCP_00001 725 5 Oral 0.45 protein_coding downstream_gene_variant MODIFIER *260C>T None
M0124062 FOMBHBCP_00001 972 3 Oral 0.27 protein_coding downstream_gene_variant MODIFIER *13C>T None
M0124063 FOMBHBCP_00001 1249 4 Oral 0.36 protein_coding synonymous_variant LOW 1665C>A Gly555Gly
M0124064 FOMBHBCP_00001 1753 4 Oral 0.36 protein_coding synonymous_variant LOW 1161T>C Ile387Ile
M0124065 FOMBHBCP_00001 2326 4 Oral 0.36 protein_coding synonymous_variant LOW 588T>C Phe196Phe
M0124066 FOMBHBCP_00001 2410 4 Oral 0.36 protein_coding synonymous_variant LOW 504T>C Gly168Gly
M0124067 FOMBHBCP_00001 2446 6 Oral 0.55 protein_coding synonymous_variant LOW 468C>T Asn156Asn
M0124068 FOMBHBCP_00001 2455 6 Oral 0.55 protein_coding synonymous_variant LOW 459C>T Pro153Pro
M0124069 FOMBHBCP_00001 2500 6 Oral 0.55 protein_coding missense_variant MODERATE 414C>A Asp138Glu
M0124070 FOMBHBCP_00001 2578 3 Oral 0.27 protein_coding synonymous_variant LOW 336T>A Thr112Thr
M0124071 FOMBHBCP_00001 2596 6 Oral 0.55 protein_coding synonymous_variant LOW 318T>C Ala106Ala
M0124072 FOMBHBCP_00001 2608 5 Oral 0.45 protein_coding synonymous_variant LOW 306C>T Asn102Asn
M0124073 FOMBHBCP_00001 2680 3 Oral 0.27 protein_coding synonymous_variant LOW 234T>C Asn78Asn
M0124074 FOMBHBCP_00001 2683 4 Oral 0.36 protein_coding synonymous_variant LOW 231G>A Glu77Glu
M0124075 FOMBHBCP_00001 2827 5 Oral 0.45 protein_coding synonymous_variant LOW 87T>A Ile29Ile
M0124076 FOMBHBCP_00001 2836 5 Oral 0.45 protein_coding synonymous_variant LOW 78C>T Asn26Asn
M0124077 FOMBHBCP_00002 3078 4 Oral 0.36 protein_coding missense_variant MODERATE 391C>A Leu131Ile
M0124078 FOMBHBCP_00002 3079 3 Oral 0.27 protein_coding synonymous_variant LOW 390T>A Ser130Ser
M0124079 FOMBHBCP_00002 3133 6 Oral 0.55 protein_coding synonymous_variant LOW 336A>T Thr112Thr
M0124080 FOMBHBCP_00003 3656 7 Oral 0.64 protein_coding synonymous_variant LOW 447A>T Ala149Ala
M0124081 FOMBHBCP_00003 3692 7 Oral 0.64 protein_coding synonymous_variant LOW 411G>T Thr137Thr
M0124082 FOMBHBCP_00003 3740 7 Oral 0.64 protein_coding synonymous_variant LOW 363A>G Gln121Gln
M0124083 FOMBHBCP_00003 3944 4 Oral 0.36 protein_coding synonymous_variant LOW 159T>A Ile53Ile
M0124084 FOMBHBCP_00003 4019 4 Oral 0.36 protein_coding synonymous_variant LOW 84T>C Leu28Leu
M0124085 FOMBHBCP_00001 4104 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -1191G>A None
M0124086 FOMBHBCP_00001 4111 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -1198A>G None
M0124087 FOMBHBCP_00004 4275 5 Oral 0.45 protein_coding synonymous_variant LOW 1368T>C Ser456Ser
M0124088 FOMBHBCP_00004 4290 7 Oral 0.64 protein_coding synonymous_variant LOW 1353T>C Asp451Asp
M0124089 FOMBHBCP_00004 4298 5 Oral 0.45 protein_coding synonymous_variant LOW 1345T>C Leu449Leu
M0124090 FOMBHBCP_00004 4299 5 Oral 0.45 protein_coding synonymous_variant LOW 1344G>A Glu448Glu
M0124091 FOMBHBCP_00004 4410 4 Oral 0.36 protein_coding synonymous_variant LOW 1233C>T Tyr411Tyr
M0124092 FOMBHBCP_00004 4422 4 Oral 0.36 protein_coding synonymous_variant LOW 1221T>C Ser407Ser
M0124093 FOMBHBCP_00004 4425 3 Oral 0.27 protein_coding synonymous_variant LOW 1218T>A Val406Val
M0124094 FOMBHBCP_00004 4644 3 Oral 0.27 protein_coding synonymous_variant LOW 999A>G Gln333Gln
M0124095 FOMBHBCP_00004 4659 3 Oral 0.27 protein_coding synonymous_variant LOW 984T>C Gly328Gly
M0124096 FOMBHBCP_00004 4668 3 Oral 0.27 protein_coding synonymous_variant LOW 975T>C Asn325Asn
M0124097 FOMBHBCP_00004 4674 3 Oral 0.27 protein_coding synonymous_variant LOW 969G>A Lys323Lys
M0124098 FOMBHBCP_00004 4695 4 Oral 0.36 protein_coding synonymous_variant LOW 948T>A Ser316Ser
M0124099 FOMBHBCP_00004 4737 3 Oral 0.27 protein_coding synonymous_variant LOW 906C>T Asn302Asn
M0124100 FOMBHBCP_00004 4749 5 Oral 0.45 protein_coding synonymous_variant LOW 894A>G Ser298Ser
M0124101 FOMBHBCP_00004 4761 5 Oral 0.45 protein_coding synonymous_variant LOW 882T>C Asp294Asp
M0124102 FOMBHBCP_00004 4791 5 Oral 0.45 protein_coding synonymous_variant LOW 852G>A Thr284Thr
M0124103 FOMBHBCP_00004 4811 5 Oral 0.45 protein_coding synonymous_variant LOW 832A>C Arg278Arg
M0124104 FOMBHBCP_00004 4876 3 Oral 0.27 protein_coding missense_variant MODERATE 767T>C Val256Ala
M0124105 FOMBHBCP_00004 4947 3 Oral 0.27 protein_coding synonymous_variant LOW 696T>C Phe232Phe
M0124106 FOMBHBCP_00004 5049 3 Oral 0.27 protein_coding synonymous_variant LOW 594C>T Gly198Gly
M0124107 FOMBHBCP_00004 5114 3 Oral 0.27 protein_coding missense_variant MODERATE 529A>C Ile177Leu
M0124108 FOMBHBCP_00004 5124 3 Oral 0.27 protein_coding synonymous_variant LOW 519T>C Ile173Ile
M0124109 FOMBHBCP_00004 5151 3 Oral 0.27 protein_coding synonymous_variant LOW 492C>A Leu164Leu
M0124110 FOMBHBCP_00004 5153 3 Oral 0.27 protein_coding missense_variant MODERATE 490C>T Leu164Phe
M0124111 FOMBHBCP_00004 5154 5 Oral 0.45 protein_coding synonymous_variant LOW 489T>C Ser163Ser
M0124112 FOMBHBCP_00001 5651 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -2738T>G None
M0124113 FOMBHBCP_00001 5777 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -2864G>T None
M0124114 FOMBHBCP_00005 6398 3 Oral 0.27 protein_coding synonymous_variant LOW 240T>C Ile80Ile
M0124115 FOMBHBCP_00005 6575 4 Oral 0.36 protein_coding synonymous_variant LOW 417A>C Ala139Ala
M0124116 FOMBHBCP_00005 6659 3 Oral 0.27 protein_coding synonymous_variant LOW 501G>A Lys167Lys
M0124117 FOMBHBCP_00005 6800 4 Oral 0.36 protein_coding synonymous_variant LOW 642G>A Glu214Glu
M0124118 FOMBHBCP_00005 6965 5 Oral 0.45 protein_coding synonymous_variant LOW 807G>A Val269Val
M0124119 FOMBHBCP_00005 7028 5 Oral 0.45 protein_coding synonymous_variant LOW 870T>C Gly290Gly
M0124120 FOMBHBCP_00001 1147 3 Oral 0.27 protein_coding synonymous_variant LOW 1767C>T Gly589Gly
M0124121 FOMBHBCP_00001 2749 4 Oral 0.36 protein_coding synonymous_variant LOW 165T>C Ala55Ala
M0124122 FOMBHBCP_00001 2803 3 Oral 0.27 protein_coding synonymous_variant LOW 111G>A Val37Val
M0124123 FOMBHBCP_00002 3400 3 Oral 0.27 protein_coding missense_variant MODERATE 69A>T Glu23Asp
M0124124 FOMBHBCP_00003 3599 5 Oral 0.45 protein_coding synonymous_variant LOW 504G>A Val168Val
M0124125 FOMBHBCP_00003 3647 4 Oral 0.36 protein_coding missense_variant MODERATE 456T>A Phe152Leu
M0124126 FOMBHBCP_00003 3649 4 Oral 0.36 protein_coding missense_variant MODERATE 454T>A Phe152Ile
M0124127 FOMBHBCP_00003 3719 4 Oral 0.36 protein_coding synonymous_variant LOW 384C>T Asn128Asn
M0124128 FOMBHBCP_00003 3797 4 Oral 0.36 protein_coding synonymous_variant LOW 306C>T Ser102Ser
M0124129 FOMBHBCP_00003 3890 5 Oral 0.45 protein_coding synonymous_variant LOW 213C>T Gly71Gly
M0124130 FOMBHBCP_00003 4097 3 Oral 0.27 protein_coding synonymous_variant LOW 6C>T Asn2Asn
M0124131 FOMBHBCP_00004 4455 3 Oral 0.27 protein_coding synonymous_variant LOW 1188G>A Thr396Thr
M0124132 FOMBHBCP_00004 4493 3 Oral 0.27 protein_coding synonymous_variant LOW 1150T>C Leu384Leu
M0124133 FOMBHBCP_00004 4548 3 Oral 0.27 protein_coding missense_variant MODERATE 1095G>T Met365Ile
M0124134 FOMBHBCP_00004 4575 3 Oral 0.27 protein_coding synonymous_variant LOW 1068G>A Gln356Gln
M0124135 FOMBHBCP_00004 4584 5 Oral 0.45 protein_coding synonymous_variant LOW 1059C>T Ala353Ala
M0124136 FOMBHBCP_00004 4590 5 Oral 0.45 protein_coding synonymous_variant LOW 1053C>T Ile351Ile
M0124137 FOMBHBCP_00004 4596 3 Oral 0.27 protein_coding synonymous_variant LOW 1047C>G Gly349Gly
M0124138 FOMBHBCP_00004 4853 3 Oral 0.27 protein_coding synonymous_variant LOW 790C>T Leu264Leu
M0124139 FOMBHBCP_00004 4968 3 Oral 0.27 protein_coding synonymous_variant LOW 675C>A Arg225Arg
M0124140 FOMBHBCP_00004 4341 3 Oral 0.27 protein_coding synonymous_variant LOW 1302T>C Gly434Gly
M0124141 FOMBHBCP_00001 183 3 Oral 0.27 protein_coding downstream_gene_variant MODIFIER *802C>T None
M0124142 FOMBHBCP_00001 185 3 Oral 0.27 protein_coding downstream_gene_variant MODIFIER *800A>T None
M0124143 FOMBHBCP_00001 281 3 Oral 0.27 protein_coding downstream_gene_variant MODIFIER *704G>A None
M0124144 FOMBHBCP_00001 719 3 Oral 0.27 protein_coding downstream_gene_variant MODIFIER *266A>G None
M0124145 FOMBHBCP_00001 1491 3 Oral 0.27 protein_coding missense_variant MODERATE 1423A>G Ile475Val
M0124146 FOMBHBCP_00001 1538 3 Oral 0.27 protein_coding missense_variant MODERATE 1376A>T Gln459Leu
M0124147 FOMBHBCP_00001 1915 3 Oral 0.27 protein_coding synonymous_variant LOW 999T>G Val333Val
M0124148 FOMBHBCP_00001 5726 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -2813A>G None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term