Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2441
  Reference Plasmid   1111525849768046_bin.37__k141_36004
  Reference Plasmid Size   8345
  Reference Plasmid GC Content   0.39
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0126119 FDEKAKOA_00002 4372 4 Oral 0.31 protein_coding synonymous_variant LOW 1737T>A Ser579Ser
M0126120 FDEKAKOA_00002 4426 3 Oral 0.23 protein_coding synonymous_variant LOW 1791T>C Ile597Ile
M0126121 FDEKAKOA_00002 4465 6 Oral 0.46 protein_coding synonymous_variant LOW 1830A>T Gly610Gly
M0126122 FDEKAKOA_00002 4795 3 Oral 0.23 protein_coding missense_variant MODERATE 2160G>C Leu720Phe
M0126123 FDEKAKOA_00002 4886 3 Oral 0.23 protein_coding missense_variant MODERATE 2251G>A Asp751Asn
M0126124 FDEKAKOA_00002 4904 7 Oral 0.54 protein_coding missense_variant MODERATE 2269A>G Ile757Val
M0126125 FDEKAKOA_00002 5038 8 Oral 0.62 protein_coding synonymous_variant LOW 2403T>C His801His
M0126126 FDEKAKOA_00002 5053 3 Oral 0.23 protein_coding synonymous_variant LOW 2418C>A Gly806Gly
M0126127 FDEKAKOA_00002 5054 3 Oral 0.23 protein_coding missense_variant MODERATE 2419T>C Ser807Pro
M0126128 FDEKAKOA_00002 5055 3 Oral 0.23 protein_coding stop_gained HIGH 2420C>A Ser807*
M0126129 FDEKAKOA_00002 5056 3 Oral 0.23 protein_coding synonymous_variant LOW 2421A>T Ser807Ser
M0126130 FDEKAKOA_00002 5062 3 Oral 0.23 protein_coding synonymous_variant LOW 2427A>G Ala809Ala
M0126131 FDEKAKOA_00002 5069 3 Oral 0.23 protein_coding missense_variant MODERATE 2434G>A Val812Ile
M0126132 FDEKAKOA_00002 5092 7 Oral 0.54 protein_coding synonymous_variant LOW 2457A>G Lys819Lys
M0126133 FDEKAKOA_00002 5108 6 Oral 0.46 protein_coding missense_variant MODERATE 2473T>A Phe825Ile
M0126134 FDEKAKOA_00002 5136 4 Oral 0.31 protein_coding missense_variant MODERATE 2501A>G His834Arg
M0126135 FDEKAKOA_00002 5137 3 Oral 0.23 protein_coding synonymous_variant LOW 2502T>C His834His
M0126136 FDEKAKOA_00002 5150 4 Oral 0.31 protein_coding missense_variant MODERATE 2515C>T Leu839Phe
M0126137 FDEKAKOA_00002 5188 8 Oral 0.62 protein_coding synonymous_variant LOW 2553C>T Ser851Ser
M0126138 FDEKAKOA_00002 5246 9 Oral 0.69 protein_coding missense_variant MODERATE 2611A>G Ile871Val
M0126139 FDEKAKOA_00002 5293 9 Oral 0.69 protein_coding synonymous_variant LOW 2658C>T Gly886Gly
M0126140 FDEKAKOA_00002 5329 6 Oral 0.46 protein_coding synonymous_variant LOW 2694C>T Asn898Asn
M0126141 FDEKAKOA_00002 5347 6 Oral 0.46 protein_coding synonymous_variant LOW 2712T>A Thr904Thr
M0126142 FDEKAKOA_00002 5350 6 Oral 0.46 protein_coding synonymous_variant LOW 2715G>A Lys905Lys
M0126143 FDEKAKOA_00002 5539 3 Oral 0.23 protein_coding synonymous_variant LOW 2904T>C Asn968Asn
M0126144 FDEKAKOA_00002 5632 9 Oral 0.69 protein_coding synonymous_variant LOW 2997A>G Leu999Leu
M0126145 FDEKAKOA_00002 5635 9 Oral 0.69 protein_coding synonymous_variant LOW 3000T>C Asn1000Asn
M0126146 FDEKAKOA_00002 5680 8 Oral 0.62 protein_coding synonymous_variant LOW 3045T>A Ala1015Ala
M0126147 FDEKAKOA_00002 5695 7 Oral 0.54 protein_coding synonymous_variant LOW 3060C>T Thr1020Thr
M0126148 FDEKAKOA_00002 5743 9 Oral 0.69 protein_coding synonymous_variant LOW 3108A>G Glu1036Glu
M0126149 FDEKAKOA_00002 5893 7 Oral 0.54 protein_coding synonymous_variant LOW 3258C>T Phe1086Phe
M0126150 FDEKAKOA_00003 6011 6 Oral 0.46 protein_coding synonymous_variant LOW 39C>T Phe13Phe
M0126151 FDEKAKOA_00003 6068 3 Oral 0.23 protein_coding synonymous_variant LOW 96C>T Phe32Phe
M0126152 FDEKAKOA_00003 6069 3 Oral 0.23 protein_coding missense_variant MODERATE 97G>A Asp33Asn
M0126153 FDEKAKOA_00003 6075 3 Oral 0.23 protein_coding missense_variant MODERATE 103A>G Asn35Asp
M0126154 FDEKAKOA_00003 6180 6 Oral 0.46 protein_coding missense_variant MODERATE 208C>A Gln70Lys
M0126155 FDEKAKOA_00003 6230 5 Oral 0.38 protein_coding synonymous_variant LOW 258T>A Gly86Gly
M0126156 FDEKAKOA_00003 6236 6 Oral 0.46 protein_coding synonymous_variant LOW 264C>T Asn88Asn
M0126157 FDEKAKOA_00003 6242 5 Oral 0.38 protein_coding synonymous_variant LOW 270A>G Glu90Glu
M0126158 FDEKAKOA_00003 6243 4 Oral 0.31 protein_coding missense_variant MODERATE 271T>C Tyr91His
M0126159 FDEKAKOA_00003 6244 5 Oral 0.38 protein_coding missense_variant MODERATE 272A>T Tyr91Phe
M0126160 FDEKAKOA_00003 6338 3 Oral 0.23 protein_coding synonymous_variant LOW 366T>A Ser122Ser
M0126161 FDEKAKOA_00003 6448 5 Oral 0.38 protein_coding missense_variant MODERATE 476C>T Ser159Leu
M0126162 FDEKAKOA_00003 6578 7 Oral 0.54 protein_coding synonymous_variant LOW 606C>T Tyr202Tyr
M0126163 FDEKAKOA_00003 6650 4 Oral 0.31 protein_coding synonymous_variant LOW 678C>T Asn226Asn
M0126164 FDEKAKOA_00003 6722 4 Oral 0.31 protein_coding synonymous_variant LOW 750T>C Thr250Thr
M0126165 FDEKAKOA_00003 6797 5 Oral 0.38 protein_coding synonymous_variant LOW 825G>A Ala275Ala
M0126166 FDEKAKOA_00003 6933 5 Oral 0.38 protein_coding missense_variant MODERATE 961A>G Asn321Asp
M0126167 FDEKAKOA_00003 6935 5 Oral 0.38 protein_coding missense_variant MODERATE 963T>A Asn321Lys
M0126168 FDEKAKOA_00003 6941 5 Oral 0.38 protein_coding synonymous_variant LOW 969T>A Thr323Thr
M0126169 FDEKAKOA_00003 7037 9 Oral 0.69 protein_coding missense_variant MODERATE 1065T>G Asn355Lys
M0126170 FDEKAKOA_00003 7064 6 Oral 0.46 protein_coding missense_variant MODERATE 1092A>C Lys364Asn
M0126171 FDEKAKOA_00003 7086 9 Oral 0.69 protein_coding missense_variant MODERATE 1114G>A Asp372Asn
M0126172 FDEKAKOA_00002 7806 4 Oral 0.31 protein_coding downstream_gene_variant MODIFIER *1853A>T None
M0126173 FDEKAKOA_00002 7912 6 Oral 0.46 protein_coding downstream_gene_variant MODIFIER *1959A>T None
M0126174 FDEKAKOA_00002 267 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -2369A>G None
M0126175 FDEKAKOA_00002 306 9 Oral 0.69 protein_coding upstream_gene_variant MODIFIER -2330G>A None
M0126176 FDEKAKOA_00002 336 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -2300A>T None
M0126177 FDEKAKOA_00002 570 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -2066G>A None
M0126178 FDEKAKOA_00002 576 9 Oral 0.69 protein_coding upstream_gene_variant MODIFIER -2060T>G None
M0126179 FDEKAKOA_00002 588 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -2048G>A None
M0126180 FDEKAKOA_00002 597 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -2039G>A None
M0126181 FDEKAKOA_00002 612 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -2024G>A None
M0126182 FDEKAKOA_00002 615 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -2021T>A None
M0126183 FDEKAKOA_00002 629 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -2007T>C None
M0126184 FDEKAKOA_00002 633 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -2003A>G None
M0126185 FDEKAKOA_00002 696 4 Oral 0.31 protein_coding upstream_gene_variant MODIFIER -1940A>G None
M0126186 FDEKAKOA_00002 780 8 Oral 0.62 protein_coding upstream_gene_variant MODIFIER -1856G>A None
M0126187 FDEKAKOA_00002 988 9 Oral 0.69 protein_coding upstream_gene_variant MODIFIER -1648T>C None
M0126188 FDEKAKOA_00002 1087 9 Oral 0.69 protein_coding upstream_gene_variant MODIFIER -1549T>C None
M0126189 FDEKAKOA_00002 1091 8 Oral 0.62 protein_coding upstream_gene_variant MODIFIER -1545T>A None
M0126190 FDEKAKOA_00001 1257 8 Oral 0.62 protein_coding missense_variant MODERATE 371C>G Ala124Gly
M0126191 FDEKAKOA_00001 1259 8 Oral 0.62 protein_coding missense_variant MODERATE 369A>C Glu123Asp
M0126192 FDEKAKOA_00001 1282 8 Oral 0.62 protein_coding missense_variant MODERATE 346A>G Asn116Asp
M0126193 FDEKAKOA_00001 1301 7 Oral 0.54 protein_coding synonymous_variant LOW 327A>T Ile109Ile
M0126194 FDEKAKOA_00001 1480 8 Oral 0.62 protein_coding missense_variant MODERATE 148T>A Ser50Thr
M0126195 FDEKAKOA_00001 1608 9 Oral 0.69 protein_coding missense_variant MODERATE 20T>C Ile7Thr
M0126196 FDEKAKOA_00001 1770 9 Oral 0.69 protein_coding upstream_gene_variant MODIFIER -143T>C None
M0126197 FDEKAKOA_00001 1775 4 Oral 0.31 protein_coding upstream_gene_variant MODIFIER -148C>T None
M0126198 FDEKAKOA_00001 1780 4 Oral 0.31 protein_coding upstream_gene_variant MODIFIER -153A>C None
M0126199 FDEKAKOA_00001 2020 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -393C>A None
M0126200 FDEKAKOA_00001 2021 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -394T>C None
M0126201 FDEKAKOA_00001 2023 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -396T>A None
M0126202 FDEKAKOA_00001 2167 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -540T>G None
M0126203 FDEKAKOA_00001 2186 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -559A>T None
M0126204 FDEKAKOA_00001 2187 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -560T>G None
M0126205 FDEKAKOA_00001 2215 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -588A>G None
M0126206 FDEKAKOA_00001 2231 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -604C>T None
M0126207 FDEKAKOA_00001 2457 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -830G>T None
M0126208 FDEKAKOA_00001 2462 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -835A>G None
M0126209 FDEKAKOA_00001 2465 4 Oral 0.31 protein_coding upstream_gene_variant MODIFIER -838G>C None
M0126210 FDEKAKOA_00001 2499 9 Oral 0.69 protein_coding upstream_gene_variant MODIFIER -872T>C None
M0126211 FDEKAKOA_00001 2502 9 Oral 0.69 protein_coding upstream_gene_variant MODIFIER -875T>A None
M0126212 FDEKAKOA_00001 2518 9 Oral 0.69 protein_coding upstream_gene_variant MODIFIER -891A>T None
M0126213 FDEKAKOA_00002 2797 4 Oral 0.31 protein_coding synonymous_variant LOW 162A>G Glu54Glu
M0126214 FDEKAKOA_00002 2860 9 Oral 0.69 protein_coding synonymous_variant LOW 225T>C Asp75Asp
M0126215 FDEKAKOA_00002 2906 9 Oral 0.69 protein_coding synonymous_variant LOW 271T>C Leu91Leu
M0126216 FDEKAKOA_00002 2913 5 Oral 0.38 protein_coding missense_variant MODERATE 278A>T Tyr93Phe
M0126217 FDEKAKOA_00002 3172 9 Oral 0.69 protein_coding synonymous_variant LOW 537T>C Ala179Ala
M0126218 FDEKAKOA_00002 3268 8 Oral 0.62 protein_coding synonymous_variant LOW 633C>T Asp211Asp
M0126219 FDEKAKOA_00002 3291 4 Oral 0.31 protein_coding missense_variant MODERATE 656A>G Asn219Ser
M0126220 FDEKAKOA_00002 3427 8 Oral 0.62 protein_coding synonymous_variant LOW 792T>C Asn264Asn
M0126221 FDEKAKOA_00002 3496 7 Oral 0.54 protein_coding synonymous_variant LOW 861A>T Val287Val
M0126222 FDEKAKOA_00002 3499 7 Oral 0.54 protein_coding synonymous_variant LOW 864T>A Thr288Thr
M0126223 FDEKAKOA_00002 3835 4 Oral 0.31 protein_coding synonymous_variant LOW 1200T>C Asn400Asn
M0126224 FDEKAKOA_00002 4175 4 Oral 0.31 protein_coding missense_variant MODERATE 1540A>C Ile514Leu
M0126225 FDEKAKOA_00002 4177 4 Oral 0.31 protein_coding synonymous_variant LOW 1542C>T Ile514Ile
M0126226 FDEKAKOA_00002 4723 3 Oral 0.23 protein_coding synonymous_variant LOW 2088T>C Gly696Gly
M0126227 FDEKAKOA_00002 4957 5 Oral 0.38 protein_coding synonymous_variant LOW 2322A>G Ser774Ser
M0126228 FDEKAKOA_00002 5572 3 Oral 0.23 protein_coding synonymous_variant LOW 2937C>T Leu979Leu
M0126229 FDEKAKOA_00002 5677 3 Oral 0.23 protein_coding synonymous_variant LOW 3042G>A Lys1014Lys
M0126230 FDEKAKOA_00003 6080 5 Oral 0.38 protein_coding synonymous_variant LOW 108C>A Thr36Thr
M0126231 FDEKAKOA_00003 6171 5 Oral 0.38 protein_coding missense_variant MODERATE 199G>C Asp67His
M0126232 FDEKAKOA_00003 6234 4 Oral 0.31 protein_coding missense_variant MODERATE 262A>G Asn88Asp
M0126233 FDEKAKOA_00003 6420 6 Oral 0.46 protein_coding missense_variant MODERATE 448C>G Pro150Ala
M0126234 FDEKAKOA_00003 6723 5 Oral 0.38 protein_coding missense_variant MODERATE 751G>A Asp251Asn
M0126235 FDEKAKOA_00003 6903 4 Oral 0.31 protein_coding missense_variant MODERATE 931A>G Asn311Asp
M0126236 FDEKAKOA_00003 6930 4 Oral 0.31 protein_coding missense_variant MODERATE 958A>G Ile320Val
M0126237 FDEKAKOA_00003 7023 8 Oral 0.62 protein_coding missense_variant MODERATE 1051A>G Lys351Glu
M0126238 FDEKAKOA_00003 7024 8 Oral 0.62 protein_coding missense_variant MODERATE 1052A>C Lys351Thr
M0126239 FDEKAKOA_00003 7025 4 Oral 0.31 protein_coding synonymous_variant LOW 1053G>A Lys351Lys
M0126240 FDEKAKOA_00003 7209 4 Oral 0.31 protein_coding missense_variant MODERATE 1237G>A Val413Ile
M0126241 FDEKAKOA_00002 69 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -2567G>A None
M0126242 FDEKAKOA_00002 315 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -2321A>G None
M0126243 FDEKAKOA_00002 465 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -2171A>T None
M0126244 FDEKAKOA_00002 708 5 Oral 0.38 protein_coding upstream_gene_variant MODIFIER -1928T>G None
M0126245 FDEKAKOA_00002 994 5 Oral 0.38 protein_coding upstream_gene_variant MODIFIER -1642G>T None
M0126246 FDEKAKOA_00001 1901 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -274A>G None
M0126247 FDEKAKOA_00001 1902 4 Oral 0.31 protein_coding upstream_gene_variant MODIFIER -275G>A None
M0126248 FDEKAKOA_00001 2034 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -407C>A None
M0126249 FDEKAKOA_00001 2036 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -409A>C None
M0126250 FDEKAKOA_00001 2038 7 Oral 0.54 protein_coding upstream_gene_variant MODIFIER -411C>T None
M0126251 FDEKAKOA_00001 2426 6 Oral 0.46 protein_coding upstream_gene_variant MODIFIER -799A>T None
M0126252 FDEKAKOA_00002 3046 5 Oral 0.38 protein_coding synonymous_variant LOW 411C>T Ser137Ser
M0126253 FDEKAKOA_00002 3358 4 Oral 0.31 protein_coding synonymous_variant LOW 723T>C Asp241Asp
M0126254 FDEKAKOA_00002 3370 5 Oral 0.38 protein_coding synonymous_variant LOW 735T>G Ser245Ser
M0126255 FDEKAKOA_00002 3805 4 Oral 0.31 protein_coding synonymous_variant LOW 1170A>T Ala390Ala
M0126256 FDEKAKOA_00002 3808 4 Oral 0.31 protein_coding synonymous_variant LOW 1173T>C Asn391Asn
M0126257 FDEKAKOA_00002 3868 4 Oral 0.31 protein_coding synonymous_variant LOW 1233T>C Asp411Asp
M0126258 FDEKAKOA_00002 4328 3 Oral 0.23 protein_coding missense_variant MODERATE 1693C>T Leu565Phe
M0126259 FDEKAKOA_00002 4330 3 Oral 0.23 protein_coding synonymous_variant LOW 1695T>G Leu565Leu
M0126260 FDEKAKOA_00003 6239 3 Oral 0.23 protein_coding synonymous_variant LOW 267T>C Gly89Gly
M0126261 FDEKAKOA_00003 6245 3 Oral 0.23 protein_coding stop_gained HIGH 273T>G Tyr91*
M0126262 FDEKAKOA_00003 6344 5 Oral 0.38 protein_coding synonymous_variant LOW 372A>G Val124Val
M0126263 FDEKAKOA_00003 6347 6 Oral 0.46 protein_coding missense_variant MODERATE 375C>G Phe125Leu
M0126264 FDEKAKOA_00003 6350 6 Oral 0.46 protein_coding synonymous_variant LOW 378G>A Val126Val
M0126265 FDEKAKOA_00003 6404 6 Oral 0.46 protein_coding synonymous_variant LOW 432C>T Phe144Phe
M0126266 FDEKAKOA_00003 6677 3 Oral 0.23 protein_coding synonymous_variant LOW 705T>C Tyr235Tyr
M0126267 FDEKAKOA_00003 6683 3 Oral 0.23 protein_coding missense_variant MODERATE 711A>T Glu237Asp
M0126268 FDEKAKOA_00003 6690 3 Oral 0.23 protein_coding missense_variant MODERATE 718A>G Ile240Val
M0126269 FDEKAKOA_00003 6809 3 Oral 0.23 protein_coding synonymous_variant LOW 837G>A Val279Val
M0126270 FDEKAKOA_00003 6812 3 Oral 0.23 protein_coding synonymous_variant LOW 840A>G Lys280Lys
M0126271 FDEKAKOA_00003 6819 3 Oral 0.23 protein_coding missense_variant MODERATE 847T>C Ser283Pro
M0126272 FDEKAKOA_00003 6822 3 Oral 0.23 protein_coding missense_variant MODERATE 850G>A Ala284Thr
M0126273 FDEKAKOA_00003 6824 3 Oral 0.23 protein_coding synonymous_variant LOW 852A>T Ala284Ala
M0126274 FDEKAKOA_00003 6834 3 Oral 0.23 protein_coding missense_variant MODERATE 862A>C Lys288Gln
M0126275 FDEKAKOA_00003 7072 3 Oral 0.23 protein_coding missense_variant MODERATE 1100A>C Glu367Ala
M0126276 FDEKAKOA_00003 7186 3 Oral 0.23 protein_coding missense_variant MODERATE 1214G>A Arg405Lys
M0126277 FDEKAKOA_00003 7314 7 Oral 0.54 protein_coding missense_variant MODERATE 1342T>G Ser448Ala
M0126278 FDEKAKOA_00003 7332 4 Oral 0.31 protein_coding missense_variant MODERATE 1360A>G Thr454Ala
M0126279 FDEKAKOA_00003 7333 4 Oral 0.31 protein_coding missense_variant MODERATE 1361C>A Thr454Lys
M0126280 FDEKAKOA_00003 7339 4 Oral 0.31 protein_coding missense_variant MODERATE 1367C>A Thr456Asn
M0126281 FDEKAKOA_00003 7349 4 Oral 0.31 protein_coding synonymous_variant LOW 1377A>G Lys459Lys
M0126282 FDEKAKOA_00003 7357 7 Oral 0.54 protein_coding missense_variant MODERATE 1385A>C Glu462Ala
M0126283 FDEKAKOA_00003 7359 4 Oral 0.31 protein_coding missense_variant MODERATE 1387A>G Ser463Gly
M0126284 FDEKAKOA_00003 7371 4 Oral 0.31 protein_coding missense_variant MODERATE 1399G>A Ala467Thr
M0126285 FDEKAKOA_00003 7007 3 Oral 0.23 protein_coding synonymous_variant LOW 1035T>C Tyr345Tyr
M0126286 FDEKAKOA_00003 7008 3 Oral 0.23 protein_coding missense_variant MODERATE 1036C>T Leu346Phe
M0126287 FDEKAKOA_00003 7010 3 Oral 0.23 protein_coding synonymous_variant LOW 1038T>A Leu346Leu
M0126288 FDEKAKOA_00003 7016 3 Oral 0.23 protein_coding synonymous_variant LOW 1044T>C Asp348Asp
M0126289 FDEKAKOA_00002 920 5 Oral 0.38 protein_coding upstream_gene_variant MODIFIER -1716G>A None
M0126290 FDEKAKOA_00002 922 5 Oral 0.38 protein_coding upstream_gene_variant MODIFIER -1714T>G None
M0126291 FDEKAKOA_00001 1154 3 Oral 0.23 protein_coding synonymous_variant LOW 474G>A Glu158Glu
M0126292 FDEKAKOA_00001 1635 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -8A>C None
M0126293 FDEKAKOA_00001 1746 5 Oral 0.38 protein_coding upstream_gene_variant MODIFIER -119C>T None
M0126294 FDEKAKOA_00001 1764 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -137A>G None
M0126295 FDEKAKOA_00001 1973 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -346C>A None
M0126296 FDEKAKOA_00001 1986 5 Oral 0.38 protein_coding upstream_gene_variant MODIFIER -359C>T None
M0126297 FDEKAKOA_00001 2440 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -813C>A None
M0126298 FDEKAKOA_00002 3097 3 Oral 0.23 protein_coding synonymous_variant LOW 462A>G Val154Val
M0126299 FDEKAKOA_00003 6192 3 Oral 0.23 protein_coding missense_variant MODERATE 220A>G Asn74Asp
M0126300 FDEKAKOA_00003 6240 3 Oral 0.23 protein_coding missense_variant MODERATE 268G>A Glu90Lys
M0126301 FDEKAKOA_00003 6557 3 Oral 0.23 protein_coding synonymous_variant LOW 585C>T Thr195Thr
M0126302 FDEKAKOA_00003 6740 3 Oral 0.23 protein_coding missense_variant MODERATE 768T>G Asn256Lys
M0126303 FDEKAKOA_00003 6919 3 Oral 0.23 protein_coding missense_variant MODERATE 947C>A Thr316Asn
M0126304 FDEKAKOA_00003 7041 3 Oral 0.23 protein_coding missense_variant MODERATE 1069G>A Asp357Asn
M0126305 FDEKAKOA_00003 7042 3 Oral 0.23 protein_coding missense_variant MODERATE 1070A>G Asp357Gly
M0126306 FDEKAKOA_00003 7124 3 Oral 0.23 protein_coding synonymous_variant LOW 1152A>T Thr384Thr
M0126307 FDEKAKOA_00003 7127 3 Oral 0.23 protein_coding synonymous_variant LOW 1155T>C Gly385Gly
M0126308 FDEKAKOA_00003 7254 3 Oral 0.23 protein_coding missense_variant MODERATE 1282G>T Val428Leu
M0126309 FDEKAKOA_00003 7256 3 Oral 0.23 protein_coding synonymous_variant LOW 1284A>G Val428Val
M0126310 FDEKAKOA_00003 7345 3 Oral 0.23 protein_coding missense_variant MODERATE 1373T>A Val458Glu
M0126311 FDEKAKOA_00002 354 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -2282A>G None
M0126312 FDEKAKOA_00001 1730 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -103T>C None
M0126313 FDEKAKOA_00002 4228 3 Oral 0.23 protein_coding synonymous_variant LOW 1593T>C Ser531Ser
M0126314 FDEKAKOA_00003 6335 3 Oral 0.23 protein_coding synonymous_variant LOW 363C>T Tyr121Tyr
M0126315 FDEKAKOA_00003 6605 3 Oral 0.23 protein_coding synonymous_variant LOW 633C>T Tyr211Tyr
M0126316 FDEKAKOA_00001 1745 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -118A>C None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term