Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2448
  Reference Plasmid   1111525849768046_bin.37__k141_42568
  Reference Plasmid Size   14676
  Reference Plasmid GC Content   0.41
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0126606 CKEDBOJE_00004 5597 7 Oral 0.64 protein_coding synonymous_variant LOW 267T>C Asp89Asp
M0126607 CKEDBOJE_00004 5603 6 Oral 0.55 protein_coding synonymous_variant LOW 261C>T Asn87Asn
M0126608 CKEDBOJE_00004 5604 4 Oral 0.36 protein_coding missense_variant MODERATE 260A>G Asn87Ser
M0126609 CKEDBOJE_00004 5605 4 Oral 0.36 protein_coding missense_variant MODERATE 259A>G Asn87Asp
M0126610 CKEDBOJE_00004 5628 4 Oral 0.36 protein_coding missense_variant MODERATE 236A>C Gln79Pro
M0126611 CKEDBOJE_00004 5759 5 Oral 0.45 protein_coding synonymous_variant LOW 105T>C His35His
M0126612 CKEDBOJE_00004 5833 7 Oral 0.64 protein_coding missense_variant MODERATE 31A>G Ile11Val
M0126613 CKEDBOJE_00004 5840 4 Oral 0.36 protein_coding synonymous_variant LOW 24C>T Pro8Pro
M0126614 CKEDBOJE_00005 5905 7 Oral 0.64 protein_coding synonymous_variant LOW 1086C>T Asp362Asp
M0126615 CKEDBOJE_00005 6187 3 Oral 0.27 protein_coding synonymous_variant LOW 804T>A Ala268Ala
M0126616 CKEDBOJE_00005 6190 4 Oral 0.36 protein_coding synonymous_variant LOW 801T>C Gly267Gly
M0126617 CKEDBOJE_00005 6192 4 Oral 0.36 protein_coding missense_variant MODERATE 799G>A Gly267Ser
M0126618 CKEDBOJE_00005 6193 4 Oral 0.36 protein_coding synonymous_variant LOW 798A>T Leu266Leu
M0126619 CKEDBOJE_00005 6277 5 Oral 0.45 protein_coding synonymous_variant LOW 714A>T Leu238Leu
M0126620 CKEDBOJE_00005 6346 6 Oral 0.55 protein_coding synonymous_variant LOW 645T>C Asp215Asp
M0126621 CKEDBOJE_00005 6415 4 Oral 0.36 protein_coding synonymous_variant LOW 576C>T Pro192Pro
M0126622 CKEDBOJE_00005 6577 5 Oral 0.45 protein_coding synonymous_variant LOW 414T>C Asn138Asn
M0126623 CKEDBOJE_00005 6739 6 Oral 0.55 protein_coding synonymous_variant LOW 252G>A Glu84Glu
M0126624 CKEDBOJE_00005 6745 5 Oral 0.45 protein_coding synonymous_variant LOW 246A>G Leu82Leu
M0126625 CKEDBOJE_00005 6895 7 Oral 0.64 protein_coding synonymous_variant LOW 96A>G Ser32Ser
M0126626 CKEDBOJE_00001 7061 6 Oral 0.55 protein_coding upstream_gene_variant MODIFIER -4599A>T None
M0126627 CKEDBOJE_00001 7125 6 Oral 0.55 protein_coding upstream_gene_variant MODIFIER -4663T>A None
M0126628 CKEDBOJE_00006 7302 7 Oral 0.64 protein_coding synonymous_variant LOW 132A>G Val44Val
M0126629 CKEDBOJE_00006 7338 7 Oral 0.64 protein_coding synonymous_variant LOW 168G>A Gln56Gln
M0126630 CKEDBOJE_00006 7407 6 Oral 0.55 protein_coding synonymous_variant LOW 237T>C Asn79Asn
M0126631 CKEDBOJE_00006 7494 5 Oral 0.45 protein_coding synonymous_variant LOW 324T>A Pro108Pro
M0126632 CKEDBOJE_00006 7557 3 Oral 0.27 protein_coding synonymous_variant LOW 387A>G Glu129Glu
M0126633 CKEDBOJE_00001 882 6 Oral 0.55 protein_coding synonymous_variant LOW 1581A>G Glu527Glu
M0126634 CKEDBOJE_00001 950 4 Oral 0.36 protein_coding synonymous_variant LOW 1513C>T Leu505Leu
M0126635 CKEDBOJE_00001 963 4 Oral 0.36 protein_coding missense_variant MODERATE 1500G>C Lys500Asn
M0126636 CKEDBOJE_00001 1161 6 Oral 0.55 protein_coding synonymous_variant LOW 1302C>T Ile434Ile
M0126637 CKEDBOJE_00001 1182 6 Oral 0.55 protein_coding missense_variant MODERATE 1281G>C Leu427Phe
M0126638 CKEDBOJE_00001 1184 6 Oral 0.55 protein_coding synonymous_variant LOW 1279T>C Leu427Leu
M0126639 CKEDBOJE_00001 1307 4 Oral 0.36 protein_coding synonymous_variant LOW 1156T>C Leu386Leu
M0126640 CKEDBOJE_00001 1483 5 Oral 0.45 protein_coding missense_variant MODERATE 980T>C Val327Ala
M0126641 CKEDBOJE_00001 1542 6 Oral 0.55 protein_coding synonymous_variant LOW 921T>C Leu307Leu
M0126642 CKEDBOJE_00001 1560 3 Oral 0.27 protein_coding synonymous_variant LOW 903T>C Thr301Thr
M0126643 CKEDBOJE_00001 1566 3 Oral 0.27 protein_coding synonymous_variant LOW 897G>A Ser299Ser
M0126644 CKEDBOJE_00001 1569 3 Oral 0.27 protein_coding synonymous_variant LOW 894G>C Ala298Ala
M0126645 CKEDBOJE_00001 1617 4 Oral 0.36 protein_coding synonymous_variant LOW 846G>A Glu282Glu
M0126646 CKEDBOJE_00001 1626 5 Oral 0.45 protein_coding synonymous_variant LOW 837C>T Ile279Ile
M0126647 CKEDBOJE_00001 1680 5 Oral 0.45 protein_coding synonymous_variant LOW 783T>C Asp261Asp
M0126648 CKEDBOJE_00001 1724 4 Oral 0.36 protein_coding missense_variant MODERATE 739G>A Ala247Thr
M0126649 CKEDBOJE_00001 1773 6 Oral 0.55 protein_coding synonymous_variant LOW 690T>C Ala230Ala
M0126650 CKEDBOJE_00001 1788 6 Oral 0.55 protein_coding synonymous_variant LOW 675A>G Gly225Gly
M0126651 CKEDBOJE_00001 1815 6 Oral 0.55 protein_coding synonymous_variant LOW 648T>A Leu216Leu
M0126652 CKEDBOJE_00001 1824 4 Oral 0.36 protein_coding synonymous_variant LOW 639G>A Glu213Glu
M0126653 CKEDBOJE_00001 1905 5 Oral 0.45 protein_coding synonymous_variant LOW 558C>T Asn186Asn
M0126654 CKEDBOJE_00001 2008 5 Oral 0.45 protein_coding missense_variant MODERATE 455A>G Asn152Ser
M0126655 CKEDBOJE_00001 2016 4 Oral 0.36 protein_coding synonymous_variant LOW 447C>T Ile149Ile
M0126656 CKEDBOJE_00001 2060 5 Oral 0.45 protein_coding synonymous_variant LOW 403T>C Leu135Leu
M0126657 CKEDBOJE_00001 2061 4 Oral 0.36 protein_coding synonymous_variant LOW 402A>G Leu134Leu
M0126658 CKEDBOJE_00001 2082 6 Oral 0.55 protein_coding synonymous_variant LOW 381A>G Val127Val
M0126659 CKEDBOJE_00001 2202 6 Oral 0.55 protein_coding synonymous_variant LOW 261T>C Asp87Asp
M0126660 CKEDBOJE_00001 2319 6 Oral 0.55 protein_coding synonymous_variant LOW 144T>C Asn48Asn
M0126661 CKEDBOJE_00002 2553 5 Oral 0.45 protein_coding missense_variant MODERATE 896C>A Thr299Asn
M0126662 CKEDBOJE_00002 2554 5 Oral 0.45 protein_coding missense_variant MODERATE 895A>T Thr299Ser
M0126663 CKEDBOJE_00002 2753 6 Oral 0.55 protein_coding synonymous_variant LOW 696A>G Arg232Arg
M0126664 CKEDBOJE_00002 2774 6 Oral 0.55 protein_coding synonymous_variant LOW 675A>G Glu225Glu
M0126665 CKEDBOJE_00002 2822 6 Oral 0.55 protein_coding synonymous_variant LOW 627C>A Arg209Arg
M0126666 CKEDBOJE_00002 2939 3 Oral 0.27 protein_coding synonymous_variant LOW 510A>G Gln170Gln
M0126667 CKEDBOJE_00002 2944 4 Oral 0.36 protein_coding synonymous_variant LOW 505C>T Leu169Leu
M0126668 CKEDBOJE_00002 3038 6 Oral 0.55 protein_coding synonymous_variant LOW 411T>C Ile137Ile
M0126669 CKEDBOJE_00002 3040 6 Oral 0.55 protein_coding missense_variant MODERATE 409A>G Ile137Val
M0126670 CKEDBOJE_00002 3077 5 Oral 0.45 protein_coding synonymous_variant LOW 372T>C Phe124Phe
M0126671 CKEDBOJE_00002 3080 6 Oral 0.55 protein_coding synonymous_variant LOW 369C>T Thr123Thr
M0126672 CKEDBOJE_00002 3089 3 Oral 0.27 protein_coding synonymous_variant LOW 360T>C Phe120Phe
M0126673 CKEDBOJE_00002 3149 4 Oral 0.36 protein_coding synonymous_variant LOW 300C>T Asn100Asn
M0126674 CKEDBOJE_00002 3167 5 Oral 0.45 protein_coding synonymous_variant LOW 282A>G Lys94Lys
M0126675 CKEDBOJE_00002 3221 3 Oral 0.27 protein_coding synonymous_variant LOW 228G>C Val76Val
M0126676 CKEDBOJE_00002 3290 5 Oral 0.45 protein_coding synonymous_variant LOW 159T>C Leu53Leu
M0126677 CKEDBOJE_00002 3398 3 Oral 0.27 protein_coding synonymous_variant LOW 51T>C Ile17Ile
M0126678 CKEDBOJE_00002 3400 3 Oral 0.27 protein_coding missense_variant MODERATE 49A>T Ile17Phe
M0126679 CKEDBOJE_00001 3493 6 Oral 0.55 protein_coding upstream_gene_variant MODIFIER -1031A>G None
M0126680 CKEDBOJE_00001 3494 5 Oral 0.45 protein_coding upstream_gene_variant MODIFIER -1032G>C None
M0126681 CKEDBOJE_00001 3598 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -1136T>G None
M0126682 CKEDBOJE_00001 3622 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -1160T>C None
M0126683 CKEDBOJE_00003 3787 3 Oral 0.27 protein_coding synonymous_variant LOW 1071C>T Ser357Ser
M0126684 CKEDBOJE_00003 3853 3 Oral 0.27 protein_coding missense_variant MODERATE 1005C>G His335Gln
M0126685 CKEDBOJE_00003 3856 3 Oral 0.27 protein_coding synonymous_variant LOW 1002T>A Thr334Thr
M0126686 CKEDBOJE_00003 3909 6 Oral 0.55 protein_coding synonymous_variant LOW 949C>T Leu317Leu
M0126687 CKEDBOJE_00003 3910 6 Oral 0.55 protein_coding synonymous_variant LOW 948A>G Glu316Glu
M0126688 CKEDBOJE_00003 3940 4 Oral 0.36 protein_coding missense_variant MODERATE 918A>T Glu306Asp
M0126689 CKEDBOJE_00003 3970 5 Oral 0.45 protein_coding missense_variant MODERATE 888G>A Met296Ile
M0126690 CKEDBOJE_00003 4039 6 Oral 0.55 protein_coding synonymous_variant LOW 819A>G Thr273Thr
M0126691 CKEDBOJE_00003 4057 6 Oral 0.55 protein_coding synonymous_variant LOW 801C>T Ala267Ala
M0126692 CKEDBOJE_00003 4060 6 Oral 0.55 protein_coding synonymous_variant LOW 798A>C Ala266Ala
M0126693 CKEDBOJE_00003 4114 6 Oral 0.55 protein_coding synonymous_variant LOW 744T>C Ala248Ala
M0126694 CKEDBOJE_00003 4132 6 Oral 0.55 protein_coding synonymous_variant LOW 726C>T Gly242Gly
M0126695 CKEDBOJE_00003 4406 4 Oral 0.36 protein_coding missense_variant MODERATE 452C>G Ala151Gly
M0126696 CKEDBOJE_00003 4408 4 Oral 0.36 protein_coding synonymous_variant LOW 450T>A Pro150Pro
M0126697 CKEDBOJE_00003 4431 6 Oral 0.55 protein_coding missense_variant MODERATE 427G>T Val143Phe
M0126698 CKEDBOJE_00003 4455 3 Oral 0.27 protein_coding missense_variant MODERATE 403G>A Ala135Thr
M0126699 CKEDBOJE_00003 4513 4 Oral 0.36 protein_coding synonymous_variant LOW 345C>A Ala115Ala
M0126700 CKEDBOJE_00003 4540 4 Oral 0.36 protein_coding synonymous_variant LOW 318T>C Leu106Leu
M0126701 CKEDBOJE_00003 4564 4 Oral 0.36 protein_coding synonymous_variant LOW 294C>T Ala98Ala
M0126702 CKEDBOJE_00003 4624 3 Oral 0.27 protein_coding synonymous_variant LOW 234A>C Gly78Gly
M0126703 CKEDBOJE_00003 4684 4 Oral 0.36 protein_coding synonymous_variant LOW 174C>A Pro58Pro
M0126704 CKEDBOJE_00003 4777 6 Oral 0.55 protein_coding synonymous_variant LOW 81T>C Leu27Leu
M0126705 CKEDBOJE_00001 4867 6 Oral 0.55 protein_coding upstream_gene_variant MODIFIER -2405A>G None
M0126706 CKEDBOJE_00001 4972 6 Oral 0.55 protein_coding upstream_gene_variant MODIFIER -2510T>C None
M0126707 CKEDBOJE_00004 5063 6 Oral 0.55 protein_coding synonymous_variant LOW 801T>C Asn267Asn
M0126708 CKEDBOJE_00004 5069 5 Oral 0.45 protein_coding synonymous_variant LOW 795T>C Phe265Phe
M0126709 CKEDBOJE_00004 5117 6 Oral 0.55 protein_coding synonymous_variant LOW 747A>G Val249Val
M0126710 CKEDBOJE_00004 5156 3 Oral 0.27 protein_coding synonymous_variant LOW 708C>T Phe236Phe
M0126711 CKEDBOJE_00004 5246 6 Oral 0.55 protein_coding synonymous_variant LOW 618T>C Phe206Phe
M0126712 CKEDBOJE_00004 5263 6 Oral 0.55 protein_coding missense_variant MODERATE 601G>A Asp201Asn
M0126713 CKEDBOJE_00004 5405 3 Oral 0.27 protein_coding missense_variant MODERATE 459T>G Asn153Lys
M0126714 CKEDBOJE_00004 5474 6 Oral 0.55 protein_coding synonymous_variant LOW 390A>G Lys130Lys
M0126715 CKEDBOJE_00005 6160 4 Oral 0.36 protein_coding synonymous_variant LOW 831T>C Ser277Ser
M0126716 CKEDBOJE_00005 6280 4 Oral 0.36 protein_coding synonymous_variant LOW 711C>T Arg237Arg
M0126717 CKEDBOJE_00005 6706 4 Oral 0.36 protein_coding synonymous_variant LOW 285T>A Thr95Thr
M0126718 CKEDBOJE_00001 1119 4 Oral 0.36 protein_coding synonymous_variant LOW 1344T>G Ala448Ala
M0126719 CKEDBOJE_00001 1818 5 Oral 0.45 protein_coding synonymous_variant LOW 645T>C Asp215Asp
M0126720 CKEDBOJE_00001 1869 4 Oral 0.36 protein_coding synonymous_variant LOW 594G>A Glu198Glu
M0126721 CKEDBOJE_00001 2085 3 Oral 0.27 protein_coding synonymous_variant LOW 378T>C Asp126Asp
M0126722 CKEDBOJE_00001 2103 4 Oral 0.36 protein_coding synonymous_variant LOW 360C>T Ile120Ile
M0126723 CKEDBOJE_00001 2151 3 Oral 0.27 protein_coding synonymous_variant LOW 312G>A Arg104Arg
M0126724 CKEDBOJE_00001 2217 4 Oral 0.36 protein_coding synonymous_variant LOW 246C>T Tyr82Tyr
M0126725 CKEDBOJE_00002 2644 4 Oral 0.36 protein_coding synonymous_variant LOW 805C>T Leu269Leu
M0126726 CKEDBOJE_00002 3173 3 Oral 0.27 protein_coding synonymous_variant LOW 276A>G Lys92Lys
M0126727 CKEDBOJE_00002 3209 3 Oral 0.27 protein_coding synonymous_variant LOW 240G>C Thr80Thr
M0126728 CKEDBOJE_00001 3541 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -1079T>C None
M0126729 CKEDBOJE_00001 4966 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -2504T>C None
M0126730 CKEDBOJE_00007 8187 4 Oral 0.36 protein_coding missense_variant MODERATE 133A>G Asn45Asp
M0126731 CKEDBOJE_00007 8237 4 Oral 0.36 protein_coding missense_variant MODERATE 83C>T Ala28Val
M0126732 CKEDBOJE_00002 8326 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -4878C>G None
M0126733 CKEDBOJE_00008 8594 3 Oral 0.27 protein_coding synonymous_variant LOW 1902T>G Ser634Ser
M0126734 CKEDBOJE_00008 8927 5 Oral 0.45 protein_coding synonymous_variant LOW 1569A>G Ser523Ser
M0126735 CKEDBOJE_00008 9296 4 Oral 0.36 protein_coding synonymous_variant LOW 1200T>C Asn400Asn
M0126736 CKEDBOJE_00008 9332 4 Oral 0.36 protein_coding synonymous_variant LOW 1164C>T Val388Val
M0126737 CKEDBOJE_00008 9372 3 Oral 0.27 protein_coding missense_variant MODERATE 1124C>T Thr375Ile
M0126738 CKEDBOJE_00008 9383 5 Oral 0.45 protein_coding missense_variant MODERATE 1113C>A Asp371Glu
M0126739 CKEDBOJE_00008 9387 3 Oral 0.27 protein_coding missense_variant MODERATE 1109A>C Glu370Ala
M0126740 CKEDBOJE_00008 9515 5 Oral 0.45 protein_coding synonymous_variant LOW 981C>T Phe327Phe
M0126741 CKEDBOJE_00008 9605 5 Oral 0.45 protein_coding synonymous_variant LOW 891T>C Asn297Asn
M0126742 CKEDBOJE_00008 9647 5 Oral 0.45 protein_coding synonymous_variant LOW 849T>C Tyr283Tyr
M0126743 CKEDBOJE_00008 9716 3 Oral 0.27 protein_coding synonymous_variant LOW 780T>C Ser260Ser
M0126744 CKEDBOJE_00008 9719 3 Oral 0.27 protein_coding synonymous_variant LOW 777T>C Tyr259Tyr
M0126745 CKEDBOJE_00008 9818 3 Oral 0.27 protein_coding synonymous_variant LOW 678C>T Asp226Asp
M0126746 CKEDBOJE_00008 9821 3 Oral 0.27 protein_coding synonymous_variant LOW 675C>A Ala225Ala
M0126747 CKEDBOJE_00008 9830 4 Oral 0.36 protein_coding synonymous_variant LOW 666G>A Glu222Glu
M0126748 CKEDBOJE_00008 9834 3 Oral 0.27 protein_coding missense_variant MODERATE 662C>A Thr221Asn
M0126749 CKEDBOJE_00008 9883 3 Oral 0.27 protein_coding missense_variant MODERATE 613A>G Ile205Val
M0126750 CKEDBOJE_00008 9902 3 Oral 0.27 protein_coding synonymous_variant LOW 594C>A Thr198Thr
M0126751 CKEDBOJE_00008 9905 3 Oral 0.27 protein_coding synonymous_variant LOW 591C>T Asn197Asn
M0126752 CKEDBOJE_00008 9908 3 Oral 0.27 protein_coding synonymous_variant LOW 588T>C Ser196Ser
M0126753 CKEDBOJE_00008 9926 3 Oral 0.27 protein_coding synonymous_variant LOW 570A>T Pro190Pro
M0126754 CKEDBOJE_00008 10082 3 Oral 0.27 protein_coding synonymous_variant LOW 414C>A Thr138Thr
M0126755 CKEDBOJE_00008 10099 3 Oral 0.27 protein_coding missense_variant MODERATE 397C>G Pro133Ala
M0126756 CKEDBOJE_00008 10143 4 Oral 0.36 protein_coding missense_variant MODERATE 353A>C Asp118Ala
M0126757 CKEDBOJE_00008 10157 4 Oral 0.36 protein_coding synonymous_variant LOW 339T>C Pro113Pro
M0126758 CKEDBOJE_00008 10179 3 Oral 0.27 protein_coding missense_variant MODERATE 317T>C Ile106Thr
M0126759 CKEDBOJE_00008 10181 3 Oral 0.27 protein_coding synonymous_variant LOW 315C>T Asn105Asn
M0126760 CKEDBOJE_00008 10280 3 Oral 0.27 protein_coding synonymous_variant LOW 216G>A Thr72Thr
M0126761 CKEDBOJE_00009 11467 5 Oral 0.45 protein_coding missense_variant MODERATE 2774A>G Asn925Ser
M0126762 CKEDBOJE_00009 11478 3 Oral 0.27 protein_coding missense_variant MODERATE 2763A>T Glu921Asp
M0126763 CKEDBOJE_00009 11499 5 Oral 0.45 protein_coding synonymous_variant LOW 2742A>T Thr914Thr
M0126764 CKEDBOJE_00009 11634 5 Oral 0.45 protein_coding synonymous_variant LOW 2607A>G Lys869Lys
M0126765 CKEDBOJE_00009 12261 5 Oral 0.45 protein_coding synonymous_variant LOW 1980G>T Ser660Ser
M0126766 CKEDBOJE_00009 12273 4 Oral 0.36 protein_coding synonymous_variant LOW 1968T>C Asn656Asn
M0126767 CKEDBOJE_00009 12429 4 Oral 0.36 protein_coding synonymous_variant LOW 1812A>G Leu604Leu
M0126768 CKEDBOJE_00009 12477 5 Oral 0.45 protein_coding synonymous_variant LOW 1764C>T Ser588Ser
M0126769 CKEDBOJE_00009 12558 5 Oral 0.45 protein_coding synonymous_variant LOW 1683A>G Ser561Ser
M0126770 CKEDBOJE_00009 12606 4 Oral 0.36 protein_coding synonymous_variant LOW 1635C>T Tyr545Tyr
M0126771 CKEDBOJE_00009 12822 4 Oral 0.36 protein_coding synonymous_variant LOW 1419C>T Gly473Gly
M0126772 CKEDBOJE_00009 12840 5 Oral 0.45 protein_coding synonymous_variant LOW 1401T>C Phe467Phe
M0126773 CKEDBOJE_00009 12957 3 Oral 0.27 protein_coding missense_variant MODERATE 1284G>C Met428Ile
M0126774 CKEDBOJE_00009 13057 3 Oral 0.27 protein_coding missense_variant MODERATE 1184T>G Val395Gly
M0126775 CKEDBOJE_00009 13065 3 Oral 0.27 protein_coding missense_variant MODERATE 1176G>T Met392Ile
M0126776 CKEDBOJE_00009 13067 3 Oral 0.27 protein_coding missense_variant MODERATE 1174A>C Met392Leu
M0126777 CKEDBOJE_00009 13068 3 Oral 0.27 protein_coding missense_variant MODERATE 1173G>T Lys391Asn
M0126778 CKEDBOJE_00009 13136 4 Oral 0.36 protein_coding missense_variant MODERATE 1105G>A Val369Ile
M0126779 CKEDBOJE_00009 13291 3 Oral 0.27 protein_coding missense_variant MODERATE 950G>A Ser317Asn
M0126780 CKEDBOJE_00009 13296 5 Oral 0.45 protein_coding synonymous_variant LOW 945A>G Leu315Leu
M0126781 CKEDBOJE_00009 13308 3 Oral 0.27 protein_coding synonymous_variant LOW 933A>T Ala311Ala
M0126782 CKEDBOJE_00009 13318 3 Oral 0.27 protein_coding missense_variant MODERATE 923A>C Lys308Thr
M0126783 CKEDBOJE_00009 13322 3 Oral 0.27 protein_coding missense_variant MODERATE 919G>A Val307Ile
M0126784 CKEDBOJE_00009 13336 4 Oral 0.36 protein_coding missense_variant MODERATE 905T>C Val302Ala
M0126785 CKEDBOJE_00009 13337 4 Oral 0.36 protein_coding missense_variant MODERATE 904G>A Val302Ile
M0126786 CKEDBOJE_00009 13343 3 Oral 0.27 protein_coding missense_variant MODERATE 898G>A Val300Met
M0126787 CKEDBOJE_00009 13368 3 Oral 0.27 protein_coding synonymous_variant LOW 873T>C Tyr291Tyr
M0126788 CKEDBOJE_00009 13371 3 Oral 0.27 protein_coding synonymous_variant LOW 870C>T Pro290Pro
M0126789 CKEDBOJE_00009 13373 3 Oral 0.27 protein_coding missense_variant MODERATE 868C>A Pro290Thr
M0126790 CKEDBOJE_00009 13517 5 Oral 0.45 protein_coding missense_variant MODERATE 724C>A Gln242Lys
M0126791 CKEDBOJE_00009 13587 5 Oral 0.45 protein_coding synonymous_variant LOW 654T>C Tyr218Tyr
M0126792 CKEDBOJE_00009 13917 5 Oral 0.45 protein_coding synonymous_variant LOW 324T>C Ala108Ala
M0126793 CKEDBOJE_00009 13941 5 Oral 0.45 protein_coding synonymous_variant LOW 300G>A Glu100Glu
M0126794 CKEDBOJE_00009 13976 5 Oral 0.45 protein_coding missense_variant MODERATE 265C>A His89Asn
M0126795 CKEDBOJE_00009 14124 3 Oral 0.27 protein_coding synonymous_variant LOW 117C>T Asn39Asn
M0126796 CKEDBOJE_00008 14289 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -3794A>G None
M0126797 CKEDBOJE_00008 14400 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -3905A>G None
M0126798 CKEDBOJE_00008 14436 4 Oral 0.36 protein_coding upstream_gene_variant MODIFIER -3941A>G None
M0126799 CKEDBOJE_00008 14530 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -4035C>A None
M0126800 CKEDBOJE_00008 14543 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -4048T>G None
M0126801 CKEDBOJE_00008 14547 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -4052G>A None
M0126802 CKEDBOJE_00008 14578 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -4083T>C None
M0126803 CKEDBOJE_00008 14581 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -4086G>C None
M0126804 CKEDBOJE_00007 8174 3 Oral 0.27 protein_coding missense_variant MODERATE 146A>G Asp49Gly
M0126805 CKEDBOJE_00008 8455 3 Oral 0.27 protein_coding missense_variant MODERATE 2041A>T Thr681Ser
M0126806 CKEDBOJE_00008 8633 3 Oral 0.27 protein_coding synonymous_variant LOW 1863A>G Val621Val
M0126807 CKEDBOJE_00008 10151 3 Oral 0.27 protein_coding synonymous_variant LOW 345A>G Thr115Thr
M0126808 CKEDBOJE_00008 10165 3 Oral 0.27 protein_coding missense_variant MODERATE 331A>G Asn111Asp
M0126809 CKEDBOJE_00008 10265 3 Oral 0.27 protein_coding stop_gained HIGH 231C>A Tyr77*
M0126810 CKEDBOJE_00008 10267 3 Oral 0.27 protein_coding missense_variant MODERATE 229T>C Tyr77His
M0126811 CKEDBOJE_00005 11174 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -4184T>C None
M0126812 CKEDBOJE_00001 1584 4 Oral 0.36 protein_coding synonymous_variant LOW 879C>T Asp293Asp
M0126813 CKEDBOJE_00001 2007 3 Oral 0.27 protein_coding synonymous_variant LOW 456C>T Asn152Asn
M0126814 CKEDBOJE_00001 2397 3 Oral 0.27 protein_coding synonymous_variant LOW 66T>A Pro22Pro
M0126815 CKEDBOJE_00003 4402 4 Oral 0.36 protein_coding synonymous_variant LOW 456C>T Ser152Ser
M0126816 CKEDBOJE_00001 4969 3 Oral 0.27 protein_coding upstream_gene_variant MODIFIER -2507T>C None
M0126817 CKEDBOJE_00001 1406 3 Oral 0.27 protein_coding synonymous_variant LOW 1057T>C Leu353Leu
M0126818 CKEDBOJE_00006 7509 3 Oral 0.27 protein_coding synonymous_variant LOW 339A>T Thr113Thr
M0126819 CKEDBOJE_00006 7515 3 Oral 0.27 protein_coding synonymous_variant LOW 345A>G Ser115Ser
M0126820 CKEDBOJE_00006 7518 3 Oral 0.27 protein_coding synonymous_variant LOW 348T>A Ala116Ala
M0126821 CKEDBOJE_00009 13932 3 Oral 0.27 protein_coding synonymous_variant LOW 309T>A Gly103Gly
M0126822 CKEDBOJE_00009 13938 3 Oral 0.27 protein_coding synonymous_variant LOW 303T>C Ser101Ser






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term