Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2449
  Reference Plasmid   1111525849768046_bin.37__k141_42789
  Reference Plasmid Size   14431
  Reference Plasmid GC Content   0.40
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0126823 NPPABEKI_00003 3493 3 Oral 0.23 protein_coding synonymous_variant LOW 819G>A Ala273Ala
M0126824 NPPABEKI_00003 3514 4 Oral 0.31 protein_coding synonymous_variant LOW 798T>C Asp266Asp
M0126825 NPPABEKI_00003 3550 3 Oral 0.23 protein_coding synonymous_variant LOW 762G>A Pro254Pro
M0126826 NPPABEKI_00003 3565 4 Oral 0.31 protein_coding synonymous_variant LOW 747T>C Asn249Asn
M0126827 NPPABEKI_00003 3598 3 Oral 0.23 protein_coding synonymous_variant LOW 714T>C Gly238Gly
M0126828 NPPABEKI_00003 3631 4 Oral 0.31 protein_coding synonymous_variant LOW 681C>T Pro227Pro
M0126829 NPPABEKI_00003 3652 3 Oral 0.23 protein_coding synonymous_variant LOW 660C>T Asp220Asp
M0126830 NPPABEKI_00003 3700 3 Oral 0.23 protein_coding synonymous_variant LOW 612T>C Asn204Asn
M0126831 NPPABEKI_00003 3730 3 Oral 0.23 protein_coding synonymous_variant LOW 582T>C Gly194Gly
M0126832 NPPABEKI_00003 3739 3 Oral 0.23 protein_coding synonymous_variant LOW 573T>A Ile191Ile
M0126833 NPPABEKI_00003 3769 4 Oral 0.31 protein_coding synonymous_variant LOW 543A>T Thr181Thr
M0126834 NPPABEKI_00003 3775 4 Oral 0.31 protein_coding synonymous_variant LOW 537T>C Ala179Ala
M0126835 NPPABEKI_00003 3937 4 Oral 0.31 protein_coding synonymous_variant LOW 375T>A Val125Val
M0126836 NPPABEKI_00003 4016 3 Oral 0.23 protein_coding missense_variant MODERATE 296G>A Arg99Lys
M0126837 NPPABEKI_00003 4063 3 Oral 0.23 protein_coding synonymous_variant LOW 249C>T Gly83Gly
M0126838 NPPABEKI_00003 4105 4 Oral 0.31 protein_coding synonymous_variant LOW 207T>C Thr69Thr
M0126839 NPPABEKI_00003 4129 4 Oral 0.31 protein_coding synonymous_variant LOW 183T>C Ser61Ser
M0126840 NPPABEKI_00003 4138 3 Oral 0.23 protein_coding synonymous_variant LOW 174A>C Ile58Ile
M0126841 NPPABEKI_00004 4349 4 Oral 0.31 protein_coding synonymous_variant LOW 1563A>G Glu521Glu
M0126842 NPPABEKI_00004 4424 4 Oral 0.31 protein_coding synonymous_variant LOW 1488A>G Ala496Ala
M0126843 NPPABEKI_00004 4705 4 Oral 0.31 protein_coding missense_variant MODERATE 1207A>G Ile403Val
M0126844 NPPABEKI_00004 4706 4 Oral 0.31 protein_coding synonymous_variant LOW 1206G>A Val402Val
M0126845 NPPABEKI_00004 4745 4 Oral 0.31 protein_coding synonymous_variant LOW 1167A>G Glu389Glu
M0126846 NPPABEKI_00004 4772 3 Oral 0.23 protein_coding synonymous_variant LOW 1140T>C Asn380Asn
M0126847 NPPABEKI_00004 4841 4 Oral 0.31 protein_coding synonymous_variant LOW 1071T>C Phe357Phe
M0126848 NPPABEKI_00004 4949 4 Oral 0.31 protein_coding synonymous_variant LOW 963T>C Thr321Thr
M0126849 NPPABEKI_00004 5303 3 Oral 0.23 protein_coding synonymous_variant LOW 609T>C Arg203Arg
M0126850 NPPABEKI_00004 5318 4 Oral 0.31 protein_coding synonymous_variant LOW 594T>C Phe198Phe
M0126851 NPPABEKI_00004 5390 3 Oral 0.23 protein_coding synonymous_variant LOW 522A>C Ala174Ala
M0126852 NPPABEKI_00004 5459 3 Oral 0.23 protein_coding synonymous_variant LOW 453A>G Gly151Gly
M0126853 NPPABEKI_00004 5492 3 Oral 0.23 protein_coding synonymous_variant LOW 420A>G Val140Val
M0126854 NPPABEKI_00004 5658 4 Oral 0.31 protein_coding missense_variant MODERATE 254G>A Ser85Asn
M0126855 NPPABEKI_00004 5786 4 Oral 0.31 protein_coding missense_variant MODERATE 126C>G Asp42Glu
M0126856 NPPABEKI_00001 5932 4 Oral 0.31 protein_coding upstream_gene_variant MODIFIER -4671C>T None
M0126857 NPPABEKI_00001 5941 4 Oral 0.31 protein_coding upstream_gene_variant MODIFIER -4680A>G None
M0126858 NPPABEKI_00005 6049 4 Oral 0.31 protein_coding missense_variant MODERATE 1806A>C Glu602Asp
M0126859 NPPABEKI_00005 6298 4 Oral 0.31 protein_coding missense_variant MODERATE 1557A>T Lys519Asn
M0126860 NPPABEKI_00005 6325 3 Oral 0.23 protein_coding synonymous_variant LOW 1530T>A Ser510Ser
M0126861 NPPABEKI_00005 6349 4 Oral 0.31 protein_coding synonymous_variant LOW 1506T>C Ser502Ser
M0126862 NPPABEKI_00005 6478 3 Oral 0.23 protein_coding missense_variant MODERATE 1377C>A Asn459Lys
M0126863 NPPABEKI_00005 6514 4 Oral 0.31 protein_coding synonymous_variant LOW 1341T>C Asn447Asn
M0126864 NPPABEKI_00005 6687 4 Oral 0.31 protein_coding missense_variant MODERATE 1168T>A Ser390Thr
M0126865 NPPABEKI_00005 6787 3 Oral 0.23 protein_coding synonymous_variant LOW 1068C>T Ser356Ser
M0126866 NPPABEKI_00005 6877 4 Oral 0.31 protein_coding synonymous_variant LOW 978T>A Ile326Ile
M0126867 NPPABEKI_00005 7012 4 Oral 0.31 protein_coding synonymous_variant LOW 843C>T Asp281Asp
M0126868 NPPABEKI_00005 7024 4 Oral 0.31 protein_coding synonymous_variant LOW 831C>T His277His
M0126869 NPPABEKI_00005 7060 4 Oral 0.31 protein_coding synonymous_variant LOW 795C>T Phe265Phe
M0126870 NPPABEKI_00005 7114 4 Oral 0.31 protein_coding synonymous_variant LOW 741A>T Gly247Gly
M0126871 NPPABEKI_00005 7268 4 Oral 0.31 protein_coding missense_variant MODERATE 587T>C Val196Ala
M0126872 NPPABEKI_00005 7291 3 Oral 0.23 protein_coding synonymous_variant LOW 564T>C Asn188Asn
M0126873 NPPABEKI_00005 7310 3 Oral 0.23 protein_coding missense_variant MODERATE 545A>G Glu182Gly
M0126874 NPPABEKI_00005 7333 3 Oral 0.23 protein_coding synonymous_variant LOW 522C>T Pro174Pro
M0126875 NPPABEKI_00005 7387 4 Oral 0.31 protein_coding synonymous_variant LOW 468C>T Gly156Gly
M0126876 NPPABEKI_00005 7390 4 Oral 0.31 protein_coding synonymous_variant LOW 465T>A Thr155Thr
M0126877 NPPABEKI_00005 7417 3 Oral 0.23 protein_coding synonymous_variant LOW 438G>A Lys146Lys
M0126878 NPPABEKI_00005 7424 3 Oral 0.23 protein_coding missense_variant MODERATE 431T>C Val144Ala
M0126879 NPPABEKI_00005 7444 3 Oral 0.23 protein_coding synonymous_variant LOW 411A>C Ala137Ala
M0126880 NPPABEKI_00005 7492 4 Oral 0.31 protein_coding synonymous_variant LOW 363G>A Leu121Leu
M0126881 NPPABEKI_00005 7835 4 Oral 0.31 protein_coding missense_variant MODERATE 20A>T Lys7Met
M0126882 NPPABEKI_00006 8012 5 Oral 0.38 protein_coding synonymous_variant LOW 1545T>A Pro515Pro
M0126883 NPPABEKI_00006 8039 5 Oral 0.38 protein_coding synonymous_variant LOW 1518T>G Val506Val
M0126884 NPPABEKI_00006 8120 4 Oral 0.31 protein_coding synonymous_variant LOW 1437A>C Ile479Ile
M0126885 NPPABEKI_00006 8123 4 Oral 0.31 protein_coding synonymous_variant LOW 1434A>T Leu478Leu
M0126886 NPPABEKI_00006 8135 5 Oral 0.38 protein_coding synonymous_variant LOW 1422T>C Arg474Arg
M0126887 NPPABEKI_00006 8227 5 Oral 0.38 protein_coding missense_variant MODERATE 1330G>T Ala444Ser
M0126888 NPPABEKI_00006 8279 4 Oral 0.31 protein_coding synonymous_variant LOW 1278T>A Ala426Ala
M0126889 NPPABEKI_00006 8285 3 Oral 0.23 protein_coding synonymous_variant LOW 1272C>T Ile424Ile
M0126890 NPPABEKI_00006 8435 4 Oral 0.31 protein_coding synonymous_variant LOW 1122T>C Asn374Asn
M0126891 NPPABEKI_00006 8795 3 Oral 0.23 protein_coding synonymous_variant LOW 762C>T Phe254Phe
M0126892 NPPABEKI_00006 8876 4 Oral 0.31 protein_coding synonymous_variant LOW 681A>T Ala227Ala
M0126893 NPPABEKI_00006 8912 3 Oral 0.23 protein_coding synonymous_variant LOW 645A>G Leu215Leu
M0126894 NPPABEKI_00006 9157 5 Oral 0.38 protein_coding missense_variant MODERATE 400T>C Tyr134His
M0126895 NPPABEKI_00006 9299 4 Oral 0.31 protein_coding synonymous_variant LOW 258C>T Asn86Asn
M0126896 NPPABEKI_00007 9629 4 Oral 0.31 protein_coding missense_variant MODERATE 3277T>G Leu1093Val
M0126897 NPPABEKI_00007 9995 4 Oral 0.31 protein_coding missense_variant MODERATE 2911A>G Ile971Val
M0126898 NPPABEKI_00007 10002 4 Oral 0.31 protein_coding synonymous_variant LOW 2904T>C Asp968Asp
M0126899 NPPABEKI_00007 10065 4 Oral 0.31 protein_coding synonymous_variant LOW 2841A>G Leu947Leu
M0126900 NPPABEKI_00007 10334 4 Oral 0.31 protein_coding missense_variant MODERATE 2572A>G Ile858Val
M0126901 NPPABEKI_00007 10380 4 Oral 0.31 protein_coding synonymous_variant LOW 2526T>C Asp842Asp
M0126902 NPPABEKI_00007 10581 3 Oral 0.23 protein_coding synonymous_variant LOW 2325C>A Ala775Ala
M0126903 NPPABEKI_00007 10617 4 Oral 0.31 protein_coding synonymous_variant LOW 2289T>C Thr763Thr
M0126904 NPPABEKI_00007 10722 4 Oral 0.31 protein_coding synonymous_variant LOW 2184A>G Val728Val
M0126905 NPPABEKI_00007 10725 4 Oral 0.31 protein_coding synonymous_variant LOW 2181G>A Lys727Lys
M0126906 NPPABEKI_00007 10746 3 Oral 0.23 protein_coding synonymous_variant LOW 2160A>G Leu720Leu
M0126907 NPPABEKI_00007 10905 4 Oral 0.31 protein_coding synonymous_variant LOW 2001T>C Tyr667Tyr
M0126908 NPPABEKI_00007 10938 3 Oral 0.23 protein_coding synonymous_variant LOW 1968C>T Gly656Gly
M0126909 NPPABEKI_00007 11079 3 Oral 0.23 protein_coding synonymous_variant LOW 1827A>T Ile609Ile
M0126910 NPPABEKI_00007 11379 4 Oral 0.31 protein_coding synonymous_variant LOW 1527G>A Glu509Glu
M0126911 NPPABEKI_00007 11409 4 Oral 0.31 protein_coding synonymous_variant LOW 1497C>T Asp499Asp
M0126912 NPPABEKI_00007 11451 4 Oral 0.31 protein_coding synonymous_variant LOW 1455T>C Gly485Gly
M0126913 NPPABEKI_00007 11580 5 Oral 0.38 protein_coding synonymous_variant LOW 1326T>C Arg442Arg
M0126914 NPPABEKI_00007 11688 5 Oral 0.38 protein_coding synonymous_variant LOW 1218G>A Lys406Lys
M0126915 NPPABEKI_00007 11691 3 Oral 0.23 protein_coding missense_variant MODERATE 1215T>G Asn405Lys
M0126916 NPPABEKI_00007 11850 4 Oral 0.31 protein_coding synonymous_variant LOW 1056A>G Lys352Lys
M0126917 NPPABEKI_00007 11880 4 Oral 0.31 protein_coding synonymous_variant LOW 1026C>T Pro342Pro
M0126918 NPPABEKI_00007 11886 5 Oral 0.38 protein_coding missense_variant MODERATE 1020G>T Glu340Asp
M0126919 NPPABEKI_00007 11943 3 Oral 0.23 protein_coding synonymous_variant LOW 963C>A Thr321Thr
M0126920 NPPABEKI_00007 11976 5 Oral 0.38 protein_coding synonymous_variant LOW 930G>A Ser310Ser
M0126921 NPPABEKI_00007 12000 5 Oral 0.38 protein_coding synonymous_variant LOW 906T>A Ala302Ala
M0126922 NPPABEKI_00007 12015 4 Oral 0.31 protein_coding synonymous_variant LOW 891T>A Ser297Ser
M0126923 NPPABEKI_00007 12144 5 Oral 0.38 protein_coding synonymous_variant LOW 762G>A Ala254Ala
M0126924 NPPABEKI_00007 12174 5 Oral 0.38 protein_coding synonymous_variant LOW 732G>A Ser244Ser
M0126925 NPPABEKI_00007 12186 3 Oral 0.23 protein_coding synonymous_variant LOW 720G>A Gln240Gln
M0126926 NPPABEKI_00007 12384 5 Oral 0.38 protein_coding synonymous_variant LOW 522T>C Tyr174Tyr
M0126927 NPPABEKI_00007 12396 5 Oral 0.38 protein_coding synonymous_variant LOW 510T>C Leu170Leu
M0126928 NPPABEKI_00007 12522 4 Oral 0.31 protein_coding synonymous_variant LOW 384G>A Gly128Gly
M0126929 NPPABEKI_00007 12531 4 Oral 0.31 protein_coding synonymous_variant LOW 375A>G Lys125Lys
M0126930 NPPABEKI_00006 12965 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -3409A>G None
M0126931 NPPABEKI_00006 12966 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -3410G>A None
M0126932 NPPABEKI_00006 12973 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -3417C>T None
M0126933 NPPABEKI_00006 12977 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -3421T>A None
M0126934 NPPABEKI_00006 12981 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -3425T>A None
M0126935 NPPABEKI_00006 12982 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -3426C>G None
M0126936 NPPABEKI_00006 12990 3 Oral 0.23 protein_coding upstream_gene_variant MODIFIER -3434C>A None
M0126937 NPPABEKI_00001 865 3 Oral 0.23 protein_coding missense_variant MODERATE 397A>C Ile133Leu
M0126938 NPPABEKI_00001 872 3 Oral 0.23 protein_coding synonymous_variant LOW 390G>A Lys130Lys
M0126939 NPPABEKI_00001 885 3 Oral 0.23 protein_coding missense_variant MODERATE 377C>T Ala126Val
M0126940 NPPABEKI_00001 899 3 Oral 0.23 protein_coding synonymous_variant LOW 363A>T Pro121Pro
M0126941 NPPABEKI_00001 911 3 Oral 0.23 protein_coding synonymous_variant LOW 351G>A Glu117Glu
M0126942 NPPABEKI_00001 935 3 Oral 0.23 protein_coding synonymous_variant LOW 327C>A Gly109Gly
M0126943 NPPABEKI_00001 938 3 Oral 0.23 protein_coding synonymous_variant LOW 324C>T Tyr108Tyr
M0126944 NPPABEKI_00001 944 3 Oral 0.23 protein_coding synonymous_variant LOW 318G>A Gln106Gln
M0126945 NPPABEKI_00001 950 3 Oral 0.23 protein_coding synonymous_variant LOW 312T>G Leu104Leu
M0126946 NPPABEKI_00001 953 3 Oral 0.23 protein_coding synonymous_variant LOW 309A>T Arg103Arg
M0126947 NPPABEKI_00001 962 3 Oral 0.23 protein_coding synonymous_variant LOW 300A>G Leu100Leu
M0126948 NPPABEKI_00001 968 3 Oral 0.23 protein_coding synonymous_variant LOW 294C>T Ala98Ala
M0126949 NPPABEKI_00002 1611 3 Oral 0.23 protein_coding missense_variant MODERATE 1351A>G Ser451Gly
M0126950 NPPABEKI_00002 1812 3 Oral 0.23 protein_coding missense_variant MODERATE 1150G>A Ala384Thr
M0126951 NPPABEKI_00004 4543 3 Oral 0.23 protein_coding missense_variant MODERATE 1369G>A Val457Ile
M0126952 NPPABEKI_00004 4922 3 Oral 0.23 protein_coding synonymous_variant LOW 990A>G Lys330Lys
M0126953 NPPABEKI_00004 4994 3 Oral 0.23 protein_coding missense_variant MODERATE 918G>T Glu306Asp
M0126954 NPPABEKI_00005 6571 3 Oral 0.23 protein_coding synonymous_variant LOW 1284A>G Glu428Glu
M0126955 NPPABEKI_00005 6993 3 Oral 0.23 protein_coding missense_variant MODERATE 862A>G Ile288Val
M0126956 NPPABEKI_00005 6994 3 Oral 0.23 protein_coding synonymous_variant LOW 861G>A Val287Val
M0126957 NPPABEKI_00006 8048 3 Oral 0.23 protein_coding synonymous_variant LOW 1509C>T Leu503Leu
M0126958 NPPABEKI_00006 8210 3 Oral 0.23 protein_coding synonymous_variant LOW 1347C>A Thr449Thr
M0126959 NPPABEKI_00006 8465 4 Oral 0.31 protein_coding synonymous_variant LOW 1092C>T Thr364Thr
M0126960 NPPABEKI_00006 9086 4 Oral 0.31 protein_coding synonymous_variant LOW 471G>A Glu157Glu
M0126961 NPPABEKI_00006 9107 3 Oral 0.23 protein_coding synonymous_variant LOW 450C>T Asp150Asp
M0126962 NPPABEKI_00006 9128 4 Oral 0.31 protein_coding synonymous_variant LOW 429T>C Arg143Arg
M0126963 NPPABEKI_00006 9143 4 Oral 0.31 protein_coding synonymous_variant LOW 414A>G Ala138Ala
M0126964 NPPABEKI_00006 9239 3 Oral 0.23 protein_coding synonymous_variant LOW 318C>T Ala106Ala
M0126965 NPPABEKI_00007 10176 3 Oral 0.23 protein_coding synonymous_variant LOW 2730G>A Ser910Ser
M0126966 NPPABEKI_00007 10632 3 Oral 0.23 protein_coding synonymous_variant LOW 2274T>C Tyr758Tyr
M0126967 NPPABEKI_00007 11829 3 Oral 0.23 protein_coding synonymous_variant LOW 1077T>C Asn359Asn
M0126968 NPPABEKI_00007 12420 3 Oral 0.23 protein_coding missense_variant MODERATE 486A>G Ile162Met
M0126969 NPPABEKI_00007 12432 4 Oral 0.31 protein_coding synonymous_variant LOW 474C>T Gly158Gly
M0126970 NPPABEKI_00007 12535 3 Oral 0.23 protein_coding missense_variant MODERATE 371A>C Asn124Thr
M0126971 NPPABEKI_00007 12570 3 Oral 0.23 protein_coding synonymous_variant LOW 336A>T Ile112Ile
M0126972 NPPABEKI_00007 12576 3 Oral 0.23 protein_coding synonymous_variant LOW 330C>T Tyr110Tyr
M0126973 NPPABEKI_00007 12585 3 Oral 0.23 protein_coding synonymous_variant LOW 321T>A Pro107Pro
M0126974 NPPABEKI_00007 12588 3 Oral 0.23 protein_coding synonymous_variant LOW 318T>A Thr106Thr
M0126975 NPPABEKI_00007 12597 3 Oral 0.23 protein_coding synonymous_variant LOW 309T>C Tyr103Tyr
M0126976 NPPABEKI_00007 12601 3 Oral 0.23 protein_coding missense_variant MODERATE 305G>A Arg102Lys
M0126977 NPPABEKI_00001 235 3 Oral 0.23 protein_coding downstream_gene_variant MODIFIER *10A>T None
M0126978 NPPABEKI_00001 248 3 Oral 0.23 protein_coding synonymous_variant LOW 1014T>C Asn338Asn
M0126979 NPPABEKI_00001 665 3 Oral 0.23 protein_coding synonymous_variant LOW 597C>T Pro199Pro






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
NPPABEKI_00004 EFC70613.1|GH20 97.4 0 1 531 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term