Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2450
  Reference Plasmid   1111525849768046_bin.37__k141_43714
  Reference Plasmid Size   13110
  Reference Plasmid GC Content   0.37
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0126980 MBDAEDNM_00004 4200 3 Oral 0.33 protein_coding synonymous_variant LOW 456T>C Ala152Ala
M0126981 MBDAEDNM_00004 4203 3 Oral 0.33 protein_coding synonymous_variant LOW 453T>C Asp151Asp
M0126982 MBDAEDNM_00004 4212 3 Oral 0.33 protein_coding synonymous_variant LOW 444C>T Ala148Ala
M0126983 MBDAEDNM_00004 4218 3 Oral 0.33 protein_coding synonymous_variant LOW 438C>T His146His
M0126984 MBDAEDNM_00004 4266 3 Oral 0.33 protein_coding synonymous_variant LOW 390A>G Gln130Gln
M0126985 MBDAEDNM_00004 4425 3 Oral 0.33 protein_coding synonymous_variant LOW 231T>A Pro77Pro
M0126986 MBDAEDNM_00004 4710 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -55G>A None
M0126987 MBDAEDNM_00004 4713 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -58A>T None
M0126988 MBDAEDNM_00004 4799 6 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -144C>T None
M0126989 MBDAEDNM_00005 4871 7 Oral 0.78 protein_coding synonymous_variant LOW 42G>A Ala14Ala
M0126990 MBDAEDNM_00005 4889 6 Oral 0.67 protein_coding synonymous_variant LOW 60A>T Thr20Thr
M0126991 MBDAEDNM_00005 5051 6 Oral 0.67 protein_coding synonymous_variant LOW 222T>C Arg74Arg
M0126992 MBDAEDNM_00005 5066 4 Oral 0.44 protein_coding synonymous_variant LOW 237T>C His79His
M0126993 MBDAEDNM_00005 5261 7 Oral 0.78 protein_coding synonymous_variant LOW 432G>A Gly144Gly
M0126994 MBDAEDNM_00005 5273 3 Oral 0.33 protein_coding synonymous_variant LOW 444T>C Gly148Gly
M0126995 MBDAEDNM_00005 5318 7 Oral 0.78 protein_coding synonymous_variant LOW 489T>C Ile163Ile
M0126996 MBDAEDNM_00005 5387 7 Oral 0.78 protein_coding synonymous_variant LOW 558G>A Gly186Gly
M0126997 MBDAEDNM_00005 5393 7 Oral 0.78 protein_coding synonymous_variant LOW 564C>G Val188Val
M0126998 MBDAEDNM_00005 5513 7 Oral 0.78 protein_coding synonymous_variant LOW 684C>T Asp228Asp
M0126999 MBDAEDNM_00005 5600 7 Oral 0.78 protein_coding synonymous_variant LOW 771T>C Ser257Ser
M0127000 MBDAEDNM_00005 5642 7 Oral 0.78 protein_coding synonymous_variant LOW 813G>A Glu271Glu
M0127001 MBDAEDNM_00005 5681 7 Oral 0.78 protein_coding synonymous_variant LOW 852T>C His284His
M0127002 MBDAEDNM_00005 5711 3 Oral 0.33 protein_coding synonymous_variant LOW 882A>G Arg294Arg
M0127003 MBDAEDNM_00005 5723 7 Oral 0.78 protein_coding synonymous_variant LOW 894G>A Lys298Lys
M0127004 MBDAEDNM_00005 5955 4 Oral 0.44 protein_coding missense_variant MODERATE 1126A>G Ile376Val
M0127005 MBDAEDNM_00005 5972 5 Oral 0.56 protein_coding synonymous_variant LOW 1143G>A Ser381Ser
M0127006 MBDAEDNM_00005 5993 6 Oral 0.67 protein_coding synonymous_variant LOW 1164A>G Lys388Lys
M0127007 MBDAEDNM_00005 6011 6 Oral 0.67 protein_coding synonymous_variant LOW 1182C>T Val394Val
M0127008 MBDAEDNM_00005 6026 4 Oral 0.44 protein_coding synonymous_variant LOW 1197T>C Ile399Ile
M0127009 MBDAEDNM_00005 6065 3 Oral 0.33 protein_coding synonymous_variant LOW 1236T>C Arg412Arg
M0127010 MBDAEDNM_00005 6068 6 Oral 0.67 protein_coding synonymous_variant LOW 1239T>A Leu413Leu
M0127011 MBDAEDNM_00005 6134 7 Oral 0.78 protein_coding synonymous_variant LOW 1305C>T Ala435Ala
M0127012 MBDAEDNM_00005 6149 6 Oral 0.67 protein_coding synonymous_variant LOW 1320A>T Leu440Leu
M0127013 MBDAEDNM_00007 8804 7 Oral 0.78 protein_coding missense_variant MODERATE 703G>A Ala235Thr
M0127014 MBDAEDNM_00004 4281 3 Oral 0.33 protein_coding synonymous_variant LOW 375C>T His125His
M0127015 MBDAEDNM_00004 4551 3 Oral 0.33 protein_coding synonymous_variant LOW 105G>A Ser35Ser
M0127016 MBDAEDNM_00004 4563 4 Oral 0.44 protein_coding synonymous_variant LOW 93A>G Val31Val
M0127017 MBDAEDNM_00005 5106 3 Oral 0.33 protein_coding synonymous_variant LOW 277T>C Leu93Leu
M0127018 MBDAEDNM_00005 5171 5 Oral 0.56 protein_coding synonymous_variant LOW 342C>T Ile114Ile
M0127019 MBDAEDNM_00005 5354 4 Oral 0.44 protein_coding synonymous_variant LOW 525A>C Ala175Ala
M0127020 MBDAEDNM_00005 5357 4 Oral 0.44 protein_coding synonymous_variant LOW 528C>T Asp176Asp
M0127021 MBDAEDNM_00005 5378 6 Oral 0.67 protein_coding synonymous_variant LOW 549A>T Ile183Ile
M0127022 MBDAEDNM_00005 5510 5 Oral 0.56 protein_coding synonymous_variant LOW 681T>C His227His
M0127023 MBDAEDNM_00005 5546 4 Oral 0.44 protein_coding synonymous_variant LOW 717C>T Gly239Gly
M0127024 MBDAEDNM_00005 5558 4 Oral 0.44 protein_coding synonymous_variant LOW 729T>C Gly243Gly
M0127025 MBDAEDNM_00005 5564 3 Oral 0.33 protein_coding synonymous_variant LOW 735T>A Gly245Gly
M0127026 MBDAEDNM_00005 5693 4 Oral 0.44 protein_coding synonymous_variant LOW 864T>C Phe288Phe
M0127027 MBDAEDNM_00005 5702 4 Oral 0.44 protein_coding missense_variant MODERATE 873A>T Glu291Asp
M0127028 MBDAEDNM_00005 5732 5 Oral 0.56 protein_coding synonymous_variant LOW 903A>G Val301Val
M0127029 MBDAEDNM_00005 5777 5 Oral 0.56 protein_coding synonymous_variant LOW 948A>C Ile316Ile
M0127030 MBDAEDNM_00005 5823 5 Oral 0.56 protein_coding missense_variant MODERATE 994A>G Ile332Val
M0127031 MBDAEDNM_00005 5837 4 Oral 0.44 protein_coding synonymous_variant LOW 1008T>C Asp336Asp
M0127032 MBDAEDNM_00005 5843 5 Oral 0.56 protein_coding synonymous_variant LOW 1014T>A Gly338Gly
M0127033 MBDAEDNM_00005 5885 4 Oral 0.44 protein_coding synonymous_variant LOW 1056A>G Leu352Leu
M0127034 MBDAEDNM_00005 5903 4 Oral 0.44 protein_coding synonymous_variant LOW 1074T>A Pro358Pro
M0127035 MBDAEDNM_00005 5927 3 Oral 0.33 protein_coding synonymous_variant LOW 1098A>G Lys366Lys
M0127036 MBDAEDNM_00005 6002 3 Oral 0.33 protein_coding synonymous_variant LOW 1173A>G Glu391Glu
M0127037 MBDAEDNM_00005 6098 4 Oral 0.44 protein_coding synonymous_variant LOW 1269T>C Asn423Asn
M0127038 MBDAEDNM_00005 6119 4 Oral 0.44 protein_coding synonymous_variant LOW 1290C>T Gly430Gly
M0127039 MBDAEDNM_00005 6170 3 Oral 0.33 protein_coding synonymous_variant LOW 1341G>A Val447Val
M0127040 MBDAEDNM_00005 6187 6 Oral 0.67 protein_coding missense_variant MODERATE 1358C>A Pro453Gln
M0127041 MBDAEDNM_00005 6218 6 Oral 0.67 protein_coding synonymous_variant LOW 1389C>T Gly463Gly
M0127042 MBDAEDNM_00005 6262 3 Oral 0.33 protein_coding missense_variant MODERATE 1433G>A Ser478Asn
M0127043 MBDAEDNM_00005 6317 6 Oral 0.67 protein_coding synonymous_variant LOW 1488T>A Val496Val
M0127044 MBDAEDNM_00005 6374 3 Oral 0.33 protein_coding synonymous_variant LOW 1545C>T Arg515Arg
M0127045 MBDAEDNM_00004 6417 6 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -1762A>G None
M0127046 MBDAEDNM_00004 6483 5 Oral 0.56 protein_coding upstream_gene_variant MODIFIER -1828G>A None
M0127047 MBDAEDNM_00004 6526 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -1871T>C None
M0127048 MBDAEDNM_00004 6527 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -1872A>G None
M0127049 MBDAEDNM_00004 6534 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -1879T>C None
M0127050 MBDAEDNM_00004 6541 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -1886A>G None
M0127051 MBDAEDNM_00004 6542 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -1887G>A None
M0127052 MBDAEDNM_00004 6546 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -1891G>A None
M0127053 MBDAEDNM_00004 6563 6 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -1908C>T None
M0127054 MBDAEDNM_00004 6595 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -1940G>A None
M0127055 MBDAEDNM_00004 6626 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -1971T>A None
M0127056 MBDAEDNM_00004 6719 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -2064G>A None
M0127057 MBDAEDNM_00004 6751 6 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -2096T>C None
M0127058 MBDAEDNM_00004 6770 6 Oral 0.67 protein_coding upstream_gene_variant MODIFIER -2115G>T None
M0127059 MBDAEDNM_00006 6808 3 Oral 0.33 protein_coding synonymous_variant LOW 30G>A Arg10Arg
M0127060 MBDAEDNM_00006 6826 3 Oral 0.33 protein_coding synonymous_variant LOW 48C>A Leu16Leu
M0127061 MBDAEDNM_00006 6832 3 Oral 0.33 protein_coding synonymous_variant LOW 54G>A Ser18Ser
M0127062 MBDAEDNM_00006 6874 5 Oral 0.56 protein_coding synonymous_variant LOW 96G>A Glu32Glu
M0127063 MBDAEDNM_00006 6877 5 Oral 0.56 protein_coding synonymous_variant LOW 99T>C Pro33Pro
M0127064 MBDAEDNM_00006 6886 5 Oral 0.56 protein_coding synonymous_variant LOW 108C>T Arg36Arg
M0127065 MBDAEDNM_00006 6892 4 Oral 0.44 protein_coding synonymous_variant LOW 114A>C Ile38Ile
M0127066 MBDAEDNM_00006 6895 4 Oral 0.44 protein_coding synonymous_variant LOW 117A>C Ser39Ser
M0127067 MBDAEDNM_00006 6910 6 Oral 0.67 protein_coding synonymous_variant LOW 132G>A Ala44Ala
M0127068 MBDAEDNM_00006 6928 4 Oral 0.44 protein_coding synonymous_variant LOW 150A>G Lys50Lys
M0127069 MBDAEDNM_00006 6959 6 Oral 0.67 protein_coding synonymous_variant LOW 181C>T Leu61Leu
M0127070 MBDAEDNM_00006 6967 6 Oral 0.67 protein_coding synonymous_variant LOW 189T>C Thr63Thr
M0127071 MBDAEDNM_00006 6979 4 Oral 0.44 protein_coding synonymous_variant LOW 201C>T Leu67Leu
M0127072 MBDAEDNM_00006 6982 4 Oral 0.44 protein_coding synonymous_variant LOW 204T>A Ile68Ile
M0127073 MBDAEDNM_00006 6985 4 Oral 0.44 protein_coding synonymous_variant LOW 207A>C Thr69Thr
M0127074 MBDAEDNM_00006 6988 4 Oral 0.44 protein_coding synonymous_variant LOW 210C>T Asp70Asp
M0127075 MBDAEDNM_00006 6997 4 Oral 0.44 protein_coding synonymous_variant LOW 219C>T Cys73Cys
M0127076 MBDAEDNM_00006 7048 4 Oral 0.44 protein_coding synonymous_variant LOW 270T>A Thr90Thr
M0127077 MBDAEDNM_00006 7075 6 Oral 0.67 protein_coding synonymous_variant LOW 297G>C Thr99Thr
M0127078 MBDAEDNM_00006 7090 6 Oral 0.67 protein_coding synonymous_variant LOW 312A>G Lys104Lys
M0127079 MBDAEDNM_00006 7156 4 Oral 0.44 protein_coding synonymous_variant LOW 378T>A Ala126Ala
M0127080 MBDAEDNM_00006 7186 6 Oral 0.67 protein_coding synonymous_variant LOW 408C>T Asp136Asp
M0127081 MBDAEDNM_00006 7192 6 Oral 0.67 protein_coding synonymous_variant LOW 414T>C Pro138Pro
M0127082 MBDAEDNM_00006 7193 6 Oral 0.67 protein_coding missense_variant MODERATE 415G>A Val139Ile
M0127083 MBDAEDNM_00006 7218 6 Oral 0.67 protein_coding missense_variant MODERATE 440G>A Ser147Asn
M0127084 MBDAEDNM_00006 7219 6 Oral 0.67 protein_coding synonymous_variant LOW 441T>C Ser147Ser
M0127085 MBDAEDNM_00006 7246 6 Oral 0.67 protein_coding synonymous_variant LOW 468C>T Thr156Thr
M0127086 MBDAEDNM_00006 7274 4 Oral 0.44 protein_coding missense_variant MODERATE 496T>A Ser166Thr
M0127087 MBDAEDNM_00006 7342 5 Oral 0.56 protein_coding synonymous_variant LOW 564A>C Ala188Ala
M0127088 MBDAEDNM_00006 7366 3 Oral 0.33 protein_coding synonymous_variant LOW 588T>C Cys196Cys
M0127089 MBDAEDNM_00006 7375 3 Oral 0.33 protein_coding synonymous_variant LOW 597C>T Phe199Phe
M0127090 MBDAEDNM_00006 7438 6 Oral 0.67 protein_coding synonymous_variant LOW 660T>C Ala220Ala
M0127091 MBDAEDNM_00007 8533 4 Oral 0.44 protein_coding synonymous_variant LOW 432G>A Leu144Leu
M0127092 MBDAEDNM_00007 8536 4 Oral 0.44 protein_coding synonymous_variant LOW 435C>T Ser145Ser
M0127093 MBDAEDNM_00007 8560 3 Oral 0.33 protein_coding synonymous_variant LOW 459T>A Ile153Ile
M0127094 MBDAEDNM_00007 8563 4 Oral 0.44 protein_coding synonymous_variant LOW 462C>T Gly154Gly
M0127095 MBDAEDNM_00007 8731 5 Oral 0.56 protein_coding synonymous_variant LOW 630T>C Arg210Arg
M0127096 MBDAEDNM_00007 8803 3 Oral 0.33 protein_coding synonymous_variant LOW 702G>A Lys234Lys
M0127097 MBDAEDNM_00007 8875 4 Oral 0.44 protein_coding synonymous_variant LOW 774A>T Ala258Ala
M0127098 MBDAEDNM_00007 8896 3 Oral 0.33 protein_coding synonymous_variant LOW 795A>G Glu265Glu
M0127099 MBDAEDNM_00007 8932 6 Oral 0.67 protein_coding synonymous_variant LOW 831G>A Lys277Lys
M0127100 MBDAEDNM_00007 8959 5 Oral 0.56 protein_coding synonymous_variant LOW 858T>A Ser286Ser
M0127101 MBDAEDNM_00007 9022 6 Oral 0.67 protein_coding synonymous_variant LOW 921T>C Thr307Thr
M0127102 MBDAEDNM_00008 9346 6 Oral 0.67 protein_coding synonymous_variant LOW 93A>C Ile31Ile
M0127103 MBDAEDNM_00008 9382 3 Oral 0.33 protein_coding synonymous_variant LOW 129T>A Val43Val
M0127104 MBDAEDNM_00008 9589 5 Oral 0.56 protein_coding synonymous_variant LOW 336C>T Tyr112Tyr
M0127105 MBDAEDNM_00008 9808 5 Oral 0.56 protein_coding synonymous_variant LOW 555A>G Ala185Ala
M0127106 MBDAEDNM_00008 9817 4 Oral 0.44 protein_coding synonymous_variant LOW 564T>A Ala188Ala
M0127107 MBDAEDNM_00008 9838 4 Oral 0.44 protein_coding synonymous_variant LOW 585T>C Asn195Asn
M0127108 MBDAEDNM_00008 9916 5 Oral 0.56 protein_coding synonymous_variant LOW 663G>A Pro221Pro
M0127109 MBDAEDNM_00009 10097 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -61A>G None
M0127110 MBDAEDNM_00009 10100 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -58A>G None
M0127111 MBDAEDNM_00009 10441 4 Oral 0.44 protein_coding missense_variant MODERATE 284G>C Gly95Ala
M0127112 MBDAEDNM_00009 10856 4 Oral 0.44 protein_coding synonymous_variant LOW 699C>T Cys233Cys
M0127113 MBDAEDNM_00009 10889 4 Oral 0.44 protein_coding missense_variant MODERATE 732G>T Arg244Ser
M0127114 MBDAEDNM_00009 10892 4 Oral 0.44 protein_coding synonymous_variant LOW 735G>A Ala245Ala
M0127115 MBDAEDNM_00009 10955 3 Oral 0.33 protein_coding synonymous_variant LOW 798A>T Ala266Ala
M0127116 MBDAEDNM_00009 11051 3 Oral 0.33 protein_coding synonymous_variant LOW 894G>T Ser298Ser
M0127117 MBDAEDNM_00009 11123 3 Oral 0.33 protein_coding synonymous_variant LOW 966T>C Asp322Asp
M0127118 MBDAEDNM_00009 11126 3 Oral 0.33 protein_coding synonymous_variant LOW 969T>A Leu323Leu
M0127119 MBDAEDNM_00009 11132 4 Oral 0.44 protein_coding synonymous_variant LOW 975A>G Arg325Arg
M0127120 MBDAEDNM_00009 11261 3 Oral 0.33 protein_coding synonymous_variant LOW 1104T>C Asn368Asn
M0127121 MBDAEDNM_00009 11270 4 Oral 0.44 protein_coding synonymous_variant LOW 1113A>G Ala371Ala
M0127122 MBDAEDNM_00009 11331 4 Oral 0.44 protein_coding synonymous_variant LOW 1174T>C Leu392Leu
M0127123 MBDAEDNM_00009 11357 3 Oral 0.33 protein_coding synonymous_variant LOW 1200T>C Ala400Ala
M0127124 MBDAEDNM_00009 11393 3 Oral 0.33 protein_coding synonymous_variant LOW 1236A>T Pro412Pro
M0127125 MBDAEDNM_00009 11400 3 Oral 0.33 protein_coding synonymous_variant LOW 1243C>A Arg415Arg
M0127126 MBDAEDNM_00009 11408 3 Oral 0.33 protein_coding synonymous_variant LOW 1251C>T Thr417Thr
M0127127 MBDAEDNM_00010 11506 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -73C>T None
M0127128 MBDAEDNM_00010 11725 3 Oral 0.33 protein_coding synonymous_variant LOW 147C>T Tyr49Tyr
M0127129 MBDAEDNM_00010 11728 4 Oral 0.44 protein_coding synonymous_variant LOW 150T>C Thr50Thr
M0127130 MBDAEDNM_00010 11755 4 Oral 0.44 protein_coding synonymous_variant LOW 177C>T Tyr59Tyr
M0127131 MBDAEDNM_00010 11758 4 Oral 0.44 protein_coding synonymous_variant LOW 180A>G Ser60Ser
M0127132 MBDAEDNM_00010 11759 4 Oral 0.44 protein_coding missense_variant MODERATE 181G>A Gly61Ser
M0127133 MBDAEDNM_00010 11780 4 Oral 0.44 protein_coding synonymous_variant LOW 202C>T Leu68Leu
M0127134 MBDAEDNM_00010 11794 3 Oral 0.33 protein_coding missense_variant MODERATE 216G>A Met72Ile
M0127135 MBDAEDNM_00010 11824 4 Oral 0.44 protein_coding synonymous_variant LOW 246C>T His82His
M0127136 MBDAEDNM_00010 11836 4 Oral 0.44 protein_coding synonymous_variant LOW 258C>T Asp86Asp
M0127137 MBDAEDNM_00010 11848 4 Oral 0.44 protein_coding synonymous_variant LOW 270A>G Gly90Gly
M0127138 MBDAEDNM_00010 12106 3 Oral 0.33 protein_coding synonymous_variant LOW 528T>C Gly176Gly
M0127139 MBDAEDNM_00010 12133 3 Oral 0.33 protein_coding synonymous_variant LOW 555C>A Gly185Gly
M0127140 MBDAEDNM_00010 12163 4 Oral 0.44 protein_coding synonymous_variant LOW 585T>C Asn195Asn
M0127141 MBDAEDNM_00010 12199 4 Oral 0.44 protein_coding synonymous_variant LOW 621C>T Pro207Pro
M0127142 MBDAEDNM_00010 12235 4 Oral 0.44 protein_coding synonymous_variant LOW 657T>C Thr219Thr
M0127143 MBDAEDNM_00010 12244 3 Oral 0.33 protein_coding synonymous_variant LOW 666G>A Lys222Lys
M0127144 MBDAEDNM_00010 12272 4 Oral 0.44 protein_coding missense_variant MODERATE 694C>T Leu232Phe
M0127145 MBDAEDNM_00010 12283 4 Oral 0.44 protein_coding synonymous_variant LOW 705G>T Gly235Gly
M0127146 MBDAEDNM_00010 12295 3 Oral 0.33 protein_coding synonymous_variant LOW 717G>A Lys239Lys
M0127147 MBDAEDNM_00010 12382 3 Oral 0.33 protein_coding synonymous_variant LOW 804C>A Thr268Thr
M0127148 MBDAEDNM_00010 12463 4 Oral 0.44 protein_coding synonymous_variant LOW 885A>T Gly295Gly
M0127149 MBDAEDNM_00010 12510 4 Oral 0.44 protein_coding missense_variant MODERATE 932T>C Val311Ala
M0127150 MBDAEDNM_00010 12706 4 Oral 0.44 protein_coding synonymous_variant LOW 1128C>T Gly376Gly
M0127151 MBDAEDNM_00004 4479 3 Oral 0.33 protein_coding synonymous_variant LOW 177A>G Lys59Lys
M0127152 MBDAEDNM_00004 4557 3 Oral 0.33 protein_coding synonymous_variant LOW 99T>G Thr33Thr
M0127153 MBDAEDNM_00004 4605 3 Oral 0.33 protein_coding synonymous_variant LOW 51C>T Ser17Ser
M0127154 MBDAEDNM_00005 5468 3 Oral 0.33 protein_coding synonymous_variant LOW 639C>T Asp213Asp
M0127155 MBDAEDNM_00005 5474 3 Oral 0.33 protein_coding synonymous_variant LOW 645C>T Pro215Pro
M0127156 MBDAEDNM_00005 5525 3 Oral 0.33 protein_coding synonymous_variant LOW 696G>A Val232Val
M0127157 MBDAEDNM_00005 5828 3 Oral 0.33 protein_coding synonymous_variant LOW 999T>A Ile333Ile
M0127158 MBDAEDNM_00006 7312 3 Oral 0.33 protein_coding synonymous_variant LOW 534C>T Asp178Asp
M0127159 MBDAEDNM_00006 7313 3 Oral 0.33 protein_coding synonymous_variant LOW 535C>T Leu179Leu
M0127160 MBDAEDNM_00006 7324 3 Oral 0.33 protein_coding synonymous_variant LOW 546T>G Thr182Thr
M0127161 MBDAEDNM_00006 7355 3 Oral 0.33 protein_coding missense_variant MODERATE 577G>A Ala193Thr
M0127162 MBDAEDNM_00006 7450 3 Oral 0.33 protein_coding synonymous_variant LOW 672A>G Gly224Gly
M0127163 MBDAEDNM_00006 7456 5 Oral 0.56 protein_coding synonymous_variant LOW 678T>G Thr226Thr
M0127164 MBDAEDNM_00006 7480 5 Oral 0.56 protein_coding synonymous_variant LOW 702T>C Arg234Arg
M0127165 MBDAEDNM_00006 7495 5 Oral 0.56 protein_coding synonymous_variant LOW 717C>A Ala239Ala
M0127166 MBDAEDNM_00006 7522 4 Oral 0.44 protein_coding synonymous_variant LOW 744A>G Val248Val
M0127167 MBDAEDNM_00006 7612 3 Oral 0.33 protein_coding synonymous_variant LOW 834A>G Gln278Gln
M0127168 MBDAEDNM_00006 7651 3 Oral 0.33 protein_coding synonymous_variant LOW 873G>A Lys291Lys
M0127169 MBDAEDNM_00006 7666 5 Oral 0.56 protein_coding synonymous_variant LOW 888T>C Cys296Cys
M0127170 MBDAEDNM_00006 7705 4 Oral 0.44 protein_coding synonymous_variant LOW 927C>T Asn309Asn
M0127171 MBDAEDNM_00006 7723 4 Oral 0.44 protein_coding synonymous_variant LOW 945T>C Cys315Cys
M0127172 MBDAEDNM_00006 7724 3 Oral 0.33 protein_coding missense_variant MODERATE 946C>T His316Tyr
M0127173 MBDAEDNM_00006 7750 5 Oral 0.56 protein_coding synonymous_variant LOW 972A>G Leu324Leu
M0127174 MBDAEDNM_00006 7756 3 Oral 0.33 protein_coding synonymous_variant LOW 978A>G Lys326Lys
M0127175 MBDAEDNM_00006 7813 4 Oral 0.44 protein_coding synonymous_variant LOW 1035G>A Glu345Glu
M0127176 MBDAEDNM_00006 7831 5 Oral 0.56 protein_coding synonymous_variant LOW 1053G>A Pro351Pro
M0127177 MBDAEDNM_00006 7843 5 Oral 0.56 protein_coding synonymous_variant LOW 1065A>G Val355Val
M0127178 MBDAEDNM_00006 7873 4 Oral 0.44 protein_coding synonymous_variant LOW 1095A>G Glu365Glu
M0127179 MBDAEDNM_00006 7876 3 Oral 0.33 protein_coding synonymous_variant LOW 1098G>A Leu366Leu
M0127180 MBDAEDNM_00004 7984 4 Oral 0.44 protein_coding upstream_gene_variant MODIFIER -3329G>T None
M0127181 MBDAEDNM_00004 7994 3 Oral 0.33 protein_coding upstream_gene_variant MODIFIER -3339A>G None
M0127182 MBDAEDNM_00005 6344 3 Oral 0.33 protein_coding synonymous_variant LOW 1515C>T Tyr505Tyr
M0127183 MBDAEDNM_00007 8254 4 Oral 0.44 protein_coding synonymous_variant LOW 153C>T Thr51Thr
M0127184 MBDAEDNM_00007 8377 5 Oral 0.56 protein_coding synonymous_variant LOW 276A>C Thr92Thr
M0127185 MBDAEDNM_00007 8782 4 Oral 0.44 protein_coding synonymous_variant LOW 681A>G Leu227Leu
M0127186 MBDAEDNM_00007 8944 4 Oral 0.44 protein_coding synonymous_variant LOW 843C>T Gly281Gly
M0127187 MBDAEDNM_00007 9064 5 Oral 0.56 protein_coding synonymous_variant LOW 963T>G Val321Val
M0127188 MBDAEDNM_00007 9067 5 Oral 0.56 protein_coding synonymous_variant LOW 966C>T Gly322Gly
M0127189 MBDAEDNM_00007 9076 5 Oral 0.56 protein_coding synonymous_variant LOW 975T>A Val325Val
M0127190 MBDAEDNM_00008 9281 4 Oral 0.44 protein_coding missense_variant MODERATE 28A>G Ile10Val
M0127191 MBDAEDNM_00008 9325 3 Oral 0.33 protein_coding synonymous_variant LOW 72T>C Gly24Gly
M0127192 MBDAEDNM_00009 10514 3 Oral 0.33 protein_coding synonymous_variant LOW 357T>G Gly119Gly
M0127193 MBDAEDNM_00010 11995 3 Oral 0.33 protein_coding synonymous_variant LOW 417C>T Asp139Asp
M0127194 MBDAEDNM_00010 12694 3 Oral 0.33 protein_coding synonymous_variant LOW 1116T>C Asn372Asn
M0127195 MBDAEDNM_00010 12736 3 Oral 0.33 protein_coding synonymous_variant LOW 1158T>C Ala386Ala
M0127196 MBDAEDNM_00007 8281 3 Oral 0.33 protein_coding synonymous_variant LOW 180A>G Gln60Gln
M0127197 MBDAEDNM_00007 8431 4 Oral 0.44 protein_coding synonymous_variant LOW 330T>C Val110Val
M0127198 MBDAEDNM_00007 8458 3 Oral 0.33 protein_coding synonymous_variant LOW 357G>A Ala119Ala
M0127199 MBDAEDNM_00007 8686 3 Oral 0.33 protein_coding synonymous_variant LOW 585G>A Glu195Glu
M0127200 MBDAEDNM_00007 8770 3 Oral 0.33 protein_coding synonymous_variant LOW 669G>A Val223Val
M0127201 MBDAEDNM_00007 8800 3 Oral 0.33 protein_coding synonymous_variant LOW 699A>G Lys233Lys
M0127202 MBDAEDNM_00007 8821 3 Oral 0.33 protein_coding synonymous_variant LOW 720A>C Leu240Leu
M0127203 MBDAEDNM_00007 8869 3 Oral 0.33 protein_coding synonymous_variant LOW 768G>A Ser256Ser
M0127204 MBDAEDNM_00005 5087 3 Oral 0.33 protein_coding synonymous_variant LOW 258T>C Thr86Thr
M0127205 MBDAEDNM_00005 5420 3 Oral 0.33 protein_coding synonymous_variant LOW 591C>A Ile197Ile
M0127206 MBDAEDNM_00005 5423 3 Oral 0.33 protein_coding synonymous_variant LOW 594A>G Glu198Glu
M0127207 MBDAEDNM_00005 5426 3 Oral 0.33 protein_coding synonymous_variant LOW 597A>G Val199Val






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term