Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2477
  Reference Plasmid   1111525849768046_bin.37__k141_95004
  Reference Plasmid Size   13509
  Reference Plasmid GC Content   0.33
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0129014 NKNBCEHN_00013 12584 4 Oral 0.33 protein_coding synonymous_variant LOW 321G>A Lys107Lys
M0129015 NKNBCEHN_00013 12596 4 Oral 0.33 protein_coding synonymous_variant LOW 333A>G Lys111Lys
M0129016 NKNBCEHN_00013 12662 4 Oral 0.33 protein_coding synonymous_variant LOW 399C>T Asp133Asp
M0129017 NKNBCEHN_00013 12671 4 Oral 0.33 protein_coding synonymous_variant LOW 408C>T Asn136Asn
M0129018 NKNBCEHN_00013 12705 4 Oral 0.33 protein_coding missense_variant MODERATE 442A>G Ile148Val
M0129019 NKNBCEHN_00014 12742 4 Oral 0.33 protein_coding synonymous_variant LOW 636T>C Tyr212Tyr
M0129020 NKNBCEHN_00014 12973 3 Oral 0.25 protein_coding synonymous_variant LOW 405T>C Phe135Phe
M0129021 NKNBCEHN_00006 7867 3 Oral 0.25 protein_coding missense_variant MODERATE 592A>G Ser198Gly
M0129022 NKNBCEHN_00006 7896 3 Oral 0.25 protein_coding synonymous_variant LOW 621A>T Pro207Pro
M0129023 NKNBCEHN_00006 7909 3 Oral 0.25 protein_coding missense_variant MODERATE 634A>G Lys212Glu
M0129024 NKNBCEHN_00006 7933 3 Oral 0.25 protein_coding missense_variant MODERATE 658A>C Ile220Leu
M0129025 NKNBCEHN_00006 7944 3 Oral 0.25 protein_coding synonymous_variant LOW 669T>A Ile223Ile
M0129026 NKNBCEHN_00006 8002 4 Oral 0.33 protein_coding synonymous_variant LOW 727T>C Leu243Leu
M0129027 NKNBCEHN_00006 8008 4 Oral 0.33 protein_coding missense_variant MODERATE 733A>G Ile245Val
M0129028 NKNBCEHN_00006 8013 3 Oral 0.25 protein_coding synonymous_variant LOW 738G>T Ala246Ala
M0129029 NKNBCEHN_00006 8043 3 Oral 0.25 protein_coding synonymous_variant LOW 768T>G Thr256Thr
M0129030 NKNBCEHN_00006 8067 3 Oral 0.25 protein_coding synonymous_variant LOW 792T>A Leu264Leu
M0129031 NKNBCEHN_00006 8072 3 Oral 0.25 protein_coding missense_variant MODERATE 797T>C Val266Ala
M0129032 NKNBCEHN_00006 8079 3 Oral 0.25 protein_coding synonymous_variant LOW 804C>T Asn268Asn
M0129033 NKNBCEHN_00006 8106 4 Oral 0.33 protein_coding synonymous_variant LOW 831T>C Ser277Ser
M0129034 NKNBCEHN_00006 8112 4 Oral 0.33 protein_coding synonymous_variant LOW 837C>T Asn279Asn
M0129035 NKNBCEHN_00006 8118 3 Oral 0.25 protein_coding synonymous_variant LOW 843T>C Ser281Ser
M0129036 NKNBCEHN_00007 8195 4 Oral 0.33 protein_coding synonymous_variant LOW 762A>G Thr254Thr
M0129037 NKNBCEHN_00007 8229 4 Oral 0.33 protein_coding missense_variant MODERATE 728T>C Val243Ala
M0129038 NKNBCEHN_00007 8231 3 Oral 0.25 protein_coding synonymous_variant LOW 726A>G Thr242Thr
M0129039 NKNBCEHN_00007 8273 3 Oral 0.25 protein_coding synonymous_variant LOW 684A>T Pro228Pro
M0129040 NKNBCEHN_00007 8294 3 Oral 0.25 protein_coding synonymous_variant LOW 663A>G Leu221Leu
M0129041 NKNBCEHN_00007 8309 4 Oral 0.33 protein_coding synonymous_variant LOW 648A>T Val216Val
M0129042 NKNBCEHN_00007 8321 4 Oral 0.33 protein_coding synonymous_variant LOW 636C>T Asp212Asp
M0129043 NKNBCEHN_00007 8325 3 Oral 0.25 protein_coding missense_variant MODERATE 632T>C Val211Ala
M0129044 NKNBCEHN_00007 8360 4 Oral 0.33 protein_coding synonymous_variant LOW 597G>A Lys199Lys
M0129045 NKNBCEHN_00007 8384 4 Oral 0.33 protein_coding synonymous_variant LOW 573T>G Ser191Ser
M0129046 NKNBCEHN_00007 8393 4 Oral 0.33 protein_coding synonymous_variant LOW 564C>T Arg188Arg
M0129047 NKNBCEHN_00007 8396 4 Oral 0.33 protein_coding synonymous_variant LOW 561A>G Glu187Glu
M0129048 NKNBCEHN_00007 8426 4 Oral 0.33 protein_coding synonymous_variant LOW 531G>A Leu177Leu
M0129049 NKNBCEHN_00007 8438 4 Oral 0.33 protein_coding synonymous_variant LOW 519T>C Ile173Ile
M0129050 NKNBCEHN_00007 8444 4 Oral 0.33 protein_coding synonymous_variant LOW 513T>C His171His
M0129051 NKNBCEHN_00007 8501 3 Oral 0.25 protein_coding synonymous_variant LOW 456T>G Thr152Thr
M0129052 NKNBCEHN_00007 8509 4 Oral 0.33 protein_coding missense_variant MODERATE 448A>T Ser150Cys
M0129053 NKNBCEHN_00007 8513 4 Oral 0.33 protein_coding synonymous_variant LOW 444C>A Ile148Ile
M0129054 NKNBCEHN_00007 8591 4 Oral 0.33 protein_coding synonymous_variant LOW 366T>C His122His
M0129055 NKNBCEHN_00007 8600 4 Oral 0.33 protein_coding missense_variant MODERATE 357C>A His119Gln
M0129056 NKNBCEHN_00007 8696 4 Oral 0.33 protein_coding synonymous_variant LOW 261C>T Ile87Ile
M0129057 NKNBCEHN_00007 8717 3 Oral 0.25 protein_coding synonymous_variant LOW 240T>A Thr80Thr
M0129058 NKNBCEHN_00007 8720 3 Oral 0.25 protein_coding synonymous_variant LOW 237T>A Ser79Ser
M0129059 NKNBCEHN_00007 8738 4 Oral 0.33 protein_coding synonymous_variant LOW 219T>C Thr73Thr
M0129060 NKNBCEHN_00007 8762 4 Oral 0.33 protein_coding synonymous_variant LOW 195C>T Ala65Ala
M0129061 NKNBCEHN_00007 8971 4 Oral 0.33 protein_coding upstream_gene_variant MODIFIER -15G>A None
M0129062 NKNBCEHN_00008 9213 4 Oral 0.33 protein_coding synonymous_variant LOW 165T>A Thr55Thr
M0129063 NKNBCEHN_00008 9215 4 Oral 0.33 protein_coding missense_variant MODERATE 167T>C Val56Ala
M0129064 NKNBCEHN_00009 9614 4 Oral 0.33 protein_coding synonymous_variant LOW 33G>A Leu11Leu
M0129065 NKNBCEHN_00009 9615 4 Oral 0.33 protein_coding missense_variant MODERATE 34A>G Ser12Gly
M0129066 NKNBCEHN_00009 9621 4 Oral 0.33 protein_coding missense_variant MODERATE 40C>G Leu14Val
M0129067 NKNBCEHN_00009 9641 4 Oral 0.33 protein_coding synonymous_variant LOW 60C>T Pro20Pro
M0129068 NKNBCEHN_00009 9690 4 Oral 0.33 protein_coding missense_variant MODERATE 109A>G Ile37Val
M0129069 NKNBCEHN_00009 9755 4 Oral 0.33 protein_coding synonymous_variant LOW 174T>A Ile58Ile
M0129070 NKNBCEHN_00009 9807 4 Oral 0.33 protein_coding missense_variant MODERATE 226A>G Asn76Asp
M0129071 NKNBCEHN_00009 10022 4 Oral 0.33 protein_coding synonymous_variant LOW 441A>T Val147Val
M0129072 NKNBCEHN_00009 10031 4 Oral 0.33 protein_coding synonymous_variant LOW 450C>T His150His
M0129073 NKNBCEHN_00009 10065 4 Oral 0.33 protein_coding missense_variant MODERATE 484C>A Gln162Lys
M0129074 NKNBCEHN_00009 10166 3 Oral 0.25 protein_coding synonymous_variant LOW 585A>T Ile195Ile
M0129075 NKNBCEHN_00009 10194 4 Oral 0.33 protein_coding missense_variant MODERATE 613A>G Thr205Ala
M0129076 NKNBCEHN_00009 10196 3 Oral 0.25 protein_coding synonymous_variant LOW 615T>C Thr205Thr
M0129077 NKNBCEHN_00009 10210 3 Oral 0.25 protein_coding missense_variant MODERATE 629C>A Ala210Glu
M0129078 NKNBCEHN_00009 10224 3 Oral 0.25 protein_coding missense_variant MODERATE 643G>A Asp215Asn
M0129079 NKNBCEHN_00009 10250 3 Oral 0.25 protein_coding synonymous_variant LOW 669C>T Ser223Ser
M0129080 NKNBCEHN_00009 10278 3 Oral 0.25 protein_coding missense_variant MODERATE 697A>G Asn233Asp
M0129081 NKNBCEHN_00009 10335 4 Oral 0.33 protein_coding missense_variant MODERATE 754C>A Leu252Ile
M0129082 NKNBCEHN_00010 10460 4 Oral 0.33 protein_coding synonymous_variant LOW 73C>T Leu25Leu
M0129083 NKNBCEHN_00010 10498 4 Oral 0.33 protein_coding synonymous_variant LOW 111T>A Ser37Ser
M0129084 NKNBCEHN_00010 10603 3 Oral 0.25 protein_coding synonymous_variant LOW 216G>A Thr72Thr
M0129085 NKNBCEHN_00010 10858 3 Oral 0.25 protein_coding synonymous_variant LOW 471T>C Asn157Asn
M0129086 NKNBCEHN_00010 10891 4 Oral 0.33 protein_coding synonymous_variant LOW 504T>A Gly168Gly
M0129087 NKNBCEHN_00010 10966 4 Oral 0.33 protein_coding synonymous_variant LOW 579T>C Asp193Asp
M0129088 NKNBCEHN_00011 11022 3 Oral 0.25 protein_coding synonymous_variant LOW 18T>G Val6Val
M0129089 NKNBCEHN_00011 11131 3 Oral 0.25 protein_coding missense_variant MODERATE 127A>T Ile43Phe
M0129090 NKNBCEHN_00011 11159 3 Oral 0.25 protein_coding missense_variant MODERATE 155T>A Ile52Lys
M0129091 NKNBCEHN_00011 11292 4 Oral 0.33 protein_coding synonymous_variant LOW 288G>A Gln96Gln
M0129092 NKNBCEHN_00011 11314 3 Oral 0.25 protein_coding missense_variant MODERATE 310A>G Asn104Asp
M0129093 NKNBCEHN_00011 11466 5 Oral 0.42 protein_coding synonymous_variant LOW 462T>A Ser154Ser
M0129094 NKNBCEHN_00011 11565 5 Oral 0.42 protein_coding synonymous_variant LOW 561A>T Pro187Pro
M0129095 NKNBCEHN_00012 11685 4 Oral 0.33 protein_coding missense_variant MODERATE 17C>T Thr6Ile
M0129096 NKNBCEHN_00012 11710 3 Oral 0.25 protein_coding synonymous_variant LOW 42T>C Gly14Gly
M0129097 NKNBCEHN_00012 11719 4 Oral 0.33 protein_coding synonymous_variant LOW 51C>T Pro17Pro
M0129098 NKNBCEHN_00012 11756 3 Oral 0.25 protein_coding missense_variant MODERATE 88A>G Ile30Val
M0129099 NKNBCEHN_00012 11779 5 Oral 0.42 protein_coding synonymous_variant LOW 111G>T Val37Val
M0129100 NKNBCEHN_00012 11881 3 Oral 0.25 protein_coding synonymous_variant LOW 213T>C Asp71Asp
M0129101 NKNBCEHN_00012 11905 3 Oral 0.25 protein_coding synonymous_variant LOW 237T>C Phe79Phe
M0129102 NKNBCEHN_00012 11911 3 Oral 0.25 protein_coding synonymous_variant LOW 243C>T Gly81Gly
M0129103 NKNBCEHN_00012 12010 4 Oral 0.33 protein_coding synonymous_variant LOW 342T>G Leu114Leu
M0129104 NKNBCEHN_00012 12028 3 Oral 0.25 protein_coding synonymous_variant LOW 360C>T Ile120Ile
M0129105 NKNBCEHN_00004 3523 3 Oral 0.25 protein_coding upstream_gene_variant MODIFIER -68T>C None
M0129106 NKNBCEHN_00004 3530 3 Oral 0.25 protein_coding upstream_gene_variant MODIFIER -61C>A None
M0129107 NKNBCEHN_00004 3540 3 Oral 0.25 protein_coding upstream_gene_variant MODIFIER -51A>T None
M0129108 NKNBCEHN_00004 3549 3 Oral 0.25 protein_coding upstream_gene_variant MODIFIER -42A>G None
M0129109 NKNBCEHN_00004 3587 3 Oral 0.25 protein_coding upstream_gene_variant MODIFIER -4T>A None
M0129110 NKNBCEHN_00004 3875 4 Oral 0.33 protein_coding synonymous_variant LOW 285T>C Thr95Thr
M0129111 NKNBCEHN_00004 3890 4 Oral 0.33 protein_coding synonymous_variant LOW 300T>G Val100Val
M0129112 NKNBCEHN_00004 3956 4 Oral 0.33 protein_coding synonymous_variant LOW 366T>C Gly122Gly
M0129113 NKNBCEHN_00004 3971 3 Oral 0.25 protein_coding synonymous_variant LOW 381A>G Gln127Gln
M0129114 NKNBCEHN_00004 4010 3 Oral 0.25 protein_coding synonymous_variant LOW 420C>T Leu140Leu
M0129115 NKNBCEHN_00004 4028 3 Oral 0.25 protein_coding synonymous_variant LOW 438C>T Cys146Cys
M0129116 NKNBCEHN_00004 4034 3 Oral 0.25 protein_coding synonymous_variant LOW 444T>C Ile148Ile
M0129117 NKNBCEHN_00004 4043 3 Oral 0.25 protein_coding synonymous_variant LOW 453C>A Ile151Ile
M0129118 NKNBCEHN_00004 4054 3 Oral 0.25 protein_coding missense_variant MODERATE 464C>A Thr155Lys
M0129119 NKNBCEHN_00004 4091 4 Oral 0.33 protein_coding synonymous_variant LOW 501C>T Cys167Cys
M0129120 NKNBCEHN_00004 4487 4 Oral 0.33 protein_coding synonymous_variant LOW 897G>A Lys299Lys
M0129121 NKNBCEHN_00004 4514 5 Oral 0.42 protein_coding synonymous_variant LOW 924G>A Lys308Lys
M0129122 NKNBCEHN_00004 4517 5 Oral 0.42 protein_coding synonymous_variant LOW 927T>C Asp309Asp
M0129123 NKNBCEHN_00004 4850 3 Oral 0.25 protein_coding synonymous_variant LOW 1260C>T His420His
M0129124 NKNBCEHN_00004 4862 3 Oral 0.25 protein_coding synonymous_variant LOW 1272A>T Ala424Ala
M0129125 NKNBCEHN_00004 4952 4 Oral 0.33 protein_coding synonymous_variant LOW 1362G>A Glu454Glu
M0129126 NKNBCEHN_00004 5078 4 Oral 0.33 protein_coding synonymous_variant LOW 1488T>G Val496Val
M0129127 NKNBCEHN_00004 5228 4 Oral 0.33 protein_coding synonymous_variant LOW 1638T>C Asp546Asp
M0129128 NKNBCEHN_00004 5240 4 Oral 0.33 protein_coding synonymous_variant LOW 1650T>C Thr550Thr
M0129129 NKNBCEHN_00004 5249 4 Oral 0.33 protein_coding synonymous_variant LOW 1659G>A Glu553Glu
M0129130 NKNBCEHN_00005 5364 4 Oral 0.33 protein_coding missense_variant MODERATE 31A>C Lys11Gln
M0129131 NKNBCEHN_00005 5366 4 Oral 0.33 protein_coding synonymous_variant LOW 33G>A Lys11Lys
M0129132 NKNBCEHN_00005 5429 4 Oral 0.33 protein_coding synonymous_variant LOW 96T>C Asn32Asn
M0129133 NKNBCEHN_00005 5499 3 Oral 0.25 protein_coding synonymous_variant LOW 166C>T Leu56Leu
M0129134 NKNBCEHN_00005 5561 3 Oral 0.25 protein_coding synonymous_variant LOW 228A>G Gln76Gln
M0129135 NKNBCEHN_00005 5603 4 Oral 0.33 protein_coding synonymous_variant LOW 270A>T Ser90Ser
M0129136 NKNBCEHN_00005 5645 5 Oral 0.42 protein_coding synonymous_variant LOW 312T>C Cys104Cys
M0129137 NKNBCEHN_00005 5648 5 Oral 0.42 protein_coding synonymous_variant LOW 315C>A Ile105Ile
M0129138 NKNBCEHN_00005 5654 3 Oral 0.25 protein_coding synonymous_variant LOW 321G>A Gly107Gly
M0129139 NKNBCEHN_00005 5669 5 Oral 0.42 protein_coding synonymous_variant LOW 336A>G Leu112Leu
M0129140 NKNBCEHN_00005 5719 4 Oral 0.33 protein_coding missense_variant MODERATE 386A>G Gln129Arg
M0129141 NKNBCEHN_00005 5741 3 Oral 0.25 protein_coding synonymous_variant LOW 408T>C Ile136Ile
M0129142 NKNBCEHN_00005 5762 3 Oral 0.25 protein_coding synonymous_variant LOW 429T>C Cys143Cys
M0129143 NKNBCEHN_00005 5783 4 Oral 0.33 protein_coding synonymous_variant LOW 450T>C Asp150Asp
M0129144 NKNBCEHN_00005 5834 3 Oral 0.25 protein_coding synonymous_variant LOW 501T>C Asn167Asn
M0129145 NKNBCEHN_00005 5840 3 Oral 0.25 protein_coding synonymous_variant LOW 507A>G Pro169Pro
M0129146 NKNBCEHN_00005 5901 5 Oral 0.42 protein_coding missense_variant MODERATE 568T>C Tyr190His
M0129147 NKNBCEHN_00005 5963 4 Oral 0.33 protein_coding synonymous_variant LOW 630C>T Val210Val
M0129148 NKNBCEHN_00005 5966 4 Oral 0.33 protein_coding synonymous_variant LOW 633A>G Arg211Arg
M0129149 NKNBCEHN_00005 5969 3 Oral 0.25 protein_coding synonymous_variant LOW 636G>A Glu212Glu
M0129150 NKNBCEHN_00005 6032 3 Oral 0.25 protein_coding synonymous_variant LOW 699A>C Val233Val
M0129151 NKNBCEHN_00005 6071 4 Oral 0.33 protein_coding synonymous_variant LOW 738A>G Glu246Glu
M0129152 NKNBCEHN_00005 6465 3 Oral 0.25 protein_coding missense_variant MODERATE 1132C>G Pro378Ala
M0129153 NKNBCEHN_00005 6500 3 Oral 0.25 protein_coding synonymous_variant LOW 1167A>G Lys389Lys
M0129154 NKNBCEHN_00005 6515 3 Oral 0.25 protein_coding synonymous_variant LOW 1182G>A Gln394Gln
M0129155 NKNBCEHN_00005 6524 3 Oral 0.25 protein_coding synonymous_variant LOW 1191A>T Ser397Ser
M0129156 NKNBCEHN_00005 6533 3 Oral 0.25 protein_coding synonymous_variant LOW 1200T>C Thr400Thr
M0129157 NKNBCEHN_00005 6575 3 Oral 0.25 protein_coding synonymous_variant LOW 1242C>T Pro414Pro
M0129158 NKNBCEHN_00005 6641 3 Oral 0.25 protein_coding synonymous_variant LOW 1308A>C Ser436Ser
M0129159 NKNBCEHN_00005 6644 3 Oral 0.25 protein_coding synonymous_variant LOW 1311C>A Pro437Pro
M0129160 NKNBCEHN_00005 6719 3 Oral 0.25 protein_coding synonymous_variant LOW 1386G>A Glu462Glu
M0129161 NKNBCEHN_00005 6767 3 Oral 0.25 protein_coding synonymous_variant LOW 1434A>G Leu478Leu
M0129162 NKNBCEHN_00005 6779 3 Oral 0.25 protein_coding synonymous_variant LOW 1446A>C Gly482Gly
M0129163 NKNBCEHN_00005 6797 3 Oral 0.25 protein_coding synonymous_variant LOW 1464T>C Ile488Ile
M0129164 NKNBCEHN_00005 6903 3 Oral 0.25 protein_coding missense_variant MODERATE 1570A>G Lys524Glu
M0129165 NKNBCEHN_00005 6962 3 Oral 0.25 protein_coding synonymous_variant LOW 1629T>C Cys543Cys
M0129166 NKNBCEHN_00005 6971 3 Oral 0.25 protein_coding synonymous_variant LOW 1638G>A Arg546Arg
M0129167 NKNBCEHN_00005 6974 3 Oral 0.25 protein_coding synonymous_variant LOW 1641G>A Gln547Gln
M0129168 NKNBCEHN_00005 7082 3 Oral 0.25 protein_coding synonymous_variant LOW 1749A>T Ile583Ile
M0129169 NKNBCEHN_00005 7086 3 Oral 0.25 protein_coding missense_variant MODERATE 1753G>A Ala585Thr
M0129170 NKNBCEHN_00005 7088 4 Oral 0.33 protein_coding synonymous_variant LOW 1755A>T Ala585Ala
M0129171 NKNBCEHN_00005 7111 4 Oral 0.33 protein_coding missense_variant MODERATE 1778A>G Asp593Gly
M0129172 NKNBCEHN_00005 7151 4 Oral 0.33 protein_coding missense_variant MODERATE 1818A>G Ile606Met
M0129173 NKNBCEHN_00005 7178 3 Oral 0.25 protein_coding synonymous_variant LOW 1845A>G Leu615Leu
M0129174 NKNBCEHN_00005 7193 4 Oral 0.33 protein_coding synonymous_variant LOW 1860C>T Asn620Asn
M0129175 NKNBCEHN_00005 7196 4 Oral 0.33 protein_coding synonymous_variant LOW 1863A>G Glu621Glu
M0129176 NKNBCEHN_00005 7208 3 Oral 0.25 protein_coding synonymous_variant LOW 1875T>C Thr625Thr
M0129177 NKNBCEHN_00005 7238 3 Oral 0.25 protein_coding missense_variant MODERATE 1905T>G Asp635Glu
M0129178 NKNBCEHN_00007 8357 3 Oral 0.25 protein_coding synonymous_variant LOW 600C>T Asp200Asp
M0129179 NKNBCEHN_00008 9321 3 Oral 0.25 protein_coding synonymous_variant LOW 273A>T Thr91Thr
M0129180 NKNBCEHN_00011 11514 3 Oral 0.25 protein_coding synonymous_variant LOW 510A>G Gly170Gly
M0129181 NKNBCEHN_00012 11770 3 Oral 0.25 protein_coding synonymous_variant LOW 102A>G Ala34Ala
M0129182 NKNBCEHN_00012 12115 3 Oral 0.25 protein_coding synonymous_variant LOW 447T>C Phe149Phe
M0129183 NKNBCEHN_00012 12176 3 Oral 0.25 protein_coding missense_variant MODERATE 508A>G Ile170Val
M0129184 NKNBCEHN_00012 12184 3 Oral 0.25 protein_coding synonymous_variant LOW 516T>C Asn172Asn
M0129185 NKNBCEHN_00007 12254 3 Oral 0.25 protein_coding upstream_gene_variant MODIFIER -3298A>T None
M0129186 NKNBCEHN_00005 5900 3 Oral 0.25 protein_coding synonymous_variant LOW 567A>T Leu189Leu
M0129187 NKNBCEHN_00005 5978 3 Oral 0.25 protein_coding synonymous_variant LOW 645T>C Gly215Gly
M0129188 NKNBCEHN_00005 5771 3 Oral 0.25 protein_coding synonymous_variant LOW 438A>G Gln146Gln






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
NKNBCEHN_00006 EFC71668.1|GT2 86.3 7.77e-186 1 300 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term