Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2505
  Reference Plasmid   1111525849771679_bin.1__k141_403355
  Reference Plasmid Size   18311
  Reference Plasmid GC Content   0.68
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0042234 EMIDLBEH_00011 10991 6 Skin 0.32 protein_coding missense_variant MODERATE 647T>C Leu216Ser
M0042235 EMIDLBEH_00011 11075 3 Skin 0.16 protein_coding missense_variant MODERATE 563T>C Leu188Pro
M0042236 EMIDLBEH_00011 11517 5 Skin 0.26 protein_coding synonymous_variant LOW 121T>C Leu41Leu
M0042237 EMIDLBEH_00011 11532 3 Skin 0.16 protein_coding missense_variant MODERATE 106A>C Thr36Pro
M0042238 EMIDLBEH_00011 11533 3 Skin 0.16 protein_coding synonymous_variant LOW 105G>C Thr35Thr
M0042239 EMIDLBEH_00011 11551 3 Skin 0.16 protein_coding synonymous_variant LOW 87C>T Val29Val
M0042240 EMIDLBEH_00011 11578 3 Skin 0.16 protein_coding synonymous_variant LOW 60G>A Glu20Glu
M0042241 EMIDLBEH_00012 11694 3 Skin 0.16 protein_coding synonymous_variant LOW 21C>T Leu7Leu
M0042242 EMIDLBEH_00012 11946 5 Skin 0.26 protein_coding synonymous_variant LOW 273G>C Leu91Leu
M0042243 EMIDLBEH_00012 11961 5 Skin 0.26 protein_coding synonymous_variant LOW 288A>C Ala96Ala
M0042244 EMIDLBEH_00012 12027 3 Skin 0.16 protein_coding synonymous_variant LOW 354G>T Pro118Pro
M0042245 EMIDLBEH_00012 12276 3 Skin 0.16 protein_coding synonymous_variant LOW 603C>A Gly201Gly
M0042246 EMIDLBEH_00012 12399 6 Skin 0.32 protein_coding synonymous_variant LOW 726G>C Ala242Ala
M0042247 EMIDLBEH_00012 12408 6 Skin 0.32 protein_coding synonymous_variant LOW 735T>G Pro245Pro
M0042248 EMIDLBEH_00012 12486 4 Skin 0.21 protein_coding synonymous_variant LOW 813C>T Val271Val
M0042249 EMIDLBEH_00012 12780 5 Skin 0.26 protein_coding synonymous_variant LOW 1107A>G Arg369Arg
M0042250 EMIDLBEH_00012 12882 4 Skin 0.21 protein_coding synonymous_variant LOW 1209G>C Ala403Ala
M0042251 EMIDLBEH_00012 12903 4 Skin 0.21 protein_coding synonymous_variant LOW 1230C>G Gly410Gly
M0042252 EMIDLBEH_00012 12948 5 Skin 0.26 protein_coding synonymous_variant LOW 1275A>G Arg425Arg
M0042253 EMIDLBEH_00012 12972 5 Skin 0.26 protein_coding synonymous_variant LOW 1299C>T Ile433Ile
M0042254 EMIDLBEH_00008 13105 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4898G>C None
M0042255 EMIDLBEH_00013 13140 6 Skin 0.32 protein_coding synonymous_variant LOW 807A>G Lys269Lys
M0042256 EMIDLBEH_00013 13215 3 Skin 0.16 protein_coding synonymous_variant LOW 732G>T Leu244Leu
M0042257 EMIDLBEH_00013 13248 3 Skin 0.16 protein_coding synonymous_variant LOW 699C>G Leu233Leu
M0042258 EMIDLBEH_00013 13533 5 Skin 0.26 protein_coding synonymous_variant LOW 414T>G Leu138Leu
M0042259 EMIDLBEH_00013 13553 5 Skin 0.26 protein_coding missense_variant MODERATE 394C>G Pro132Ala
M0042260 EMIDLBEH_00013 13623 5 Skin 0.26 protein_coding synonymous_variant LOW 324T>C Ile108Ile
M0042261 EMIDLBEH_00013 13632 5 Skin 0.26 protein_coding synonymous_variant LOW 315A>C Gly105Gly
M0042262 EMIDLBEH_00009 13962 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4127T>C None
M0042263 EMIDLBEH_00014 14183 3 Skin 0.16 protein_coding synonymous_variant LOW 93C>A Val31Val
M0042264 EMIDLBEH_00014 14411 3 Skin 0.16 protein_coding synonymous_variant LOW 321T>C Ala107Ala
M0042265 EMIDLBEH_00014 14621 3 Skin 0.16 protein_coding synonymous_variant LOW 531C>T Ile177Ile
M0042266 EMIDLBEH_00014 14636 3 Skin 0.16 protein_coding synonymous_variant LOW 546C>G Gly182Gly
M0042267 EMIDLBEH_00014 14666 3 Skin 0.16 protein_coding synonymous_variant LOW 576A>G Thr192Thr
M0042268 EMIDLBEH_00015 15842 3 Skin 0.16 protein_coding synonymous_variant LOW 159T>C Tyr53Tyr
M0042269 EMIDLBEH_00016 16546 3 Skin 0.16 protein_coding missense_variant MODERATE 473G>A Arg158His
M0042270 EMIDLBEH_00016 16568 3 Skin 0.16 protein_coding missense_variant MODERATE 495G>T Lys165Asn
M0042271 EMIDLBEH_00016 16579 3 Skin 0.16 protein_coding missense_variant MODERATE 506T>G Val169Gly
M0042272 EMIDLBEH_00003 2993 9 Skin 0.47 protein_coding synonymous_variant LOW 831A>G Glu277Glu
M0042273 EMIDLBEH_00003 3032 8 Skin 0.42 protein_coding synonymous_variant LOW 792T>C Leu264Leu
M0042274 EMIDLBEH_00003 3062 6 Skin 0.32 protein_coding synonymous_variant LOW 762C>T Ala254Ala
M0042275 EMIDLBEH_00003 3140 9 Skin 0.47 protein_coding synonymous_variant LOW 684T>C Ala228Ala
M0042276 EMIDLBEH_00003 3160 9 Skin 0.47 protein_coding missense_variant MODERATE 664A>C Met222Leu
M0042277 EMIDLBEH_00003 3185 5 Skin 0.26 protein_coding synonymous_variant LOW 639C>A Ala213Ala
M0042278 EMIDLBEH_00003 3281 8 Skin 0.42 protein_coding synonymous_variant LOW 543A>C Ala181Ala
M0042279 EMIDLBEH_00003 3395 11 Skin 0.58 protein_coding synonymous_variant LOW 429T>C Gly143Gly
M0042280 EMIDLBEH_00003 3407 8 Skin 0.42 protein_coding synonymous_variant LOW 417T>C Val139Val
M0042281 EMIDLBEH_00003 3431 11 Skin 0.58 protein_coding missense_variant MODERATE 393T>G His131Gln
M0042282 EMIDLBEH_00003 3506 7 Skin 0.37 protein_coding synonymous_variant LOW 318G>C Ala106Ala
M0042283 EMIDLBEH_00003 3678 10 Skin 0.53 protein_coding missense_variant MODERATE 146T>C Val49Ala
M0042284 EMIDLBEH_00004 3954 9 Skin 0.47 protein_coding synonymous_variant LOW 438C>G Arg146Arg
M0042285 EMIDLBEH_00004 3963 9 Skin 0.47 protein_coding synonymous_variant LOW 429T>C Gly143Gly
M0042286 EMIDLBEH_00004 4101 9 Skin 0.47 protein_coding synonymous_variant LOW 291G>A Glu97Glu
M0042287 EMIDLBEH_00004 4157 3 Skin 0.16 protein_coding missense_variant MODERATE 235C>G Leu79Val
M0042288 EMIDLBEH_00004 4284 10 Skin 0.53 protein_coding synonymous_variant LOW 108G>A Gly36Gly
M0042289 EMIDLBEH_00004 4302 10 Skin 0.53 protein_coding synonymous_variant LOW 90T>C Ala30Ala
M0042290 EMIDLBEH_00004 4354 4 Skin 0.21 protein_coding missense_variant MODERATE 38C>T Pro13Leu
M0042291 EMIDLBEH_00005 4424 3 Skin 0.16 protein_coding synonymous_variant LOW 1434C>T Asp478Asp
M0042292 EMIDLBEH_00005 4498 5 Skin 0.26 protein_coding synonymous_variant LOW 1360C>T Leu454Leu
M0042293 EMIDLBEH_00005 4501 4 Skin 0.21 protein_coding missense_variant MODERATE 1357G>A Ala453Thr
M0042294 EMIDLBEH_00005 4502 5 Skin 0.26 protein_coding synonymous_variant LOW 1356C>G Ala452Ala
M0042295 EMIDLBEH_00005 4529 5 Skin 0.26 protein_coding synonymous_variant LOW 1329G>C Arg443Arg
M0042296 EMIDLBEH_00005 4532 9 Skin 0.47 protein_coding synonymous_variant LOW 1326A>G Gln442Gln
M0042297 EMIDLBEH_00005 4550 5 Skin 0.26 protein_coding synonymous_variant LOW 1308G>A Gln436Gln
M0042298 EMIDLBEH_00005 4556 5 Skin 0.26 protein_coding synonymous_variant LOW 1302G>C Val434Val
M0042299 EMIDLBEH_00005 4592 5 Skin 0.26 protein_coding missense_variant MODERATE 1266C>G Ser422Arg
M0042300 EMIDLBEH_00005 4598 5 Skin 0.26 protein_coding synonymous_variant LOW 1260G>C Gly420Gly
M0042301 EMIDLBEH_00005 4700 5 Skin 0.26 protein_coding synonymous_variant LOW 1158C>G Gly386Gly
M0042302 EMIDLBEH_00005 4718 8 Skin 0.42 protein_coding synonymous_variant LOW 1140T>C Phe380Phe
M0042303 EMIDLBEH_00005 4754 6 Skin 0.32 protein_coding synonymous_variant LOW 1104T>C Tyr368Tyr
M0042304 EMIDLBEH_00005 4763 5 Skin 0.26 protein_coding synonymous_variant LOW 1095T>C Arg365Arg
M0042305 EMIDLBEH_00005 4790 6 Skin 0.32 protein_coding synonymous_variant LOW 1068G>A Val356Val
M0042306 EMIDLBEH_00005 4847 6 Skin 0.32 protein_coding synonymous_variant LOW 1011C>T Arg337Arg
M0042307 EMIDLBEH_00005 4856 6 Skin 0.32 protein_coding synonymous_variant LOW 1002G>C Ser334Ser
M0042308 EMIDLBEH_00005 4970 6 Skin 0.32 protein_coding synonymous_variant LOW 888G>T Leu296Leu
M0042309 EMIDLBEH_00005 5129 5 Skin 0.26 protein_coding synonymous_variant LOW 729C>G Gly243Gly
M0042310 EMIDLBEH_00005 5132 5 Skin 0.26 protein_coding synonymous_variant LOW 726G>T Arg242Arg
M0042311 EMIDLBEH_00005 5294 5 Skin 0.26 protein_coding synonymous_variant LOW 564G>C Ala188Ala
M0042312 EMIDLBEH_00005 5300 5 Skin 0.26 protein_coding synonymous_variant LOW 558A>G Gly186Gly
M0042313 EMIDLBEH_00005 5309 7 Skin 0.37 protein_coding synonymous_variant LOW 549G>C Leu183Leu
M0042314 EMIDLBEH_00005 5320 7 Skin 0.37 protein_coding synonymous_variant LOW 538C>T Leu180Leu
M0042315 EMIDLBEH_00005 5327 7 Skin 0.37 protein_coding synonymous_variant LOW 531C>G Pro177Pro
M0042316 EMIDLBEH_00005 5330 8 Skin 0.42 protein_coding synonymous_variant LOW 528A>G Ala176Ala
M0042317 EMIDLBEH_00005 5392 6 Skin 0.32 protein_coding missense_variant MODERATE 466G>A Ala156Thr
M0042318 EMIDLBEH_00005 5426 3 Skin 0.16 protein_coding synonymous_variant LOW 432C>A Thr144Thr
M0042319 EMIDLBEH_00005 5450 10 Skin 0.53 protein_coding synonymous_variant LOW 408T>C Ile136Ile
M0042320 EMIDLBEH_00005 5483 8 Skin 0.42 protein_coding synonymous_variant LOW 375G>A Glu125Glu
M0042321 EMIDLBEH_00005 5534 9 Skin 0.47 protein_coding synonymous_variant LOW 324T>C Cys108Cys
M0042322 EMIDLBEH_00005 5552 4 Skin 0.21 protein_coding synonymous_variant LOW 306G>T Ala102Ala
M0042323 EMIDLBEH_00005 5561 4 Skin 0.21 protein_coding synonymous_variant LOW 297C>T Phe99Phe
M0042324 EMIDLBEH_00005 5660 4 Skin 0.21 protein_coding synonymous_variant LOW 198G>A Ala66Ala
M0042325 EMIDLBEH_00005 5663 4 Skin 0.21 protein_coding synonymous_variant LOW 195G>A Leu65Leu
M0042326 EMIDLBEH_00005 5699 6 Skin 0.32 protein_coding synonymous_variant LOW 159G>C Gly53Gly
M0042327 EMIDLBEH_00005 5744 4 Skin 0.21 protein_coding synonymous_variant LOW 114C>G Thr38Thr
M0042328 EMIDLBEH_00005 5777 3 Skin 0.16 protein_coding synonymous_variant LOW 81C>T Phe27Phe
M0042329 EMIDLBEH_00002 6000 7 Skin 0.37 protein_coding upstream_gene_variant MODIFIER -4405C>T None
M0042330 EMIDLBEH_00002 6014 7 Skin 0.37 protein_coding upstream_gene_variant MODIFIER -4419C>G None
M0042331 EMIDLBEH_00008 7776 5 Skin 0.26 protein_coding synonymous_variant LOW 432C>A Gly144Gly
M0042332 EMIDLBEH_00008 7896 7 Skin 0.37 protein_coding synonymous_variant LOW 312G>A Gly104Gly
M0042333 EMIDLBEH_00008 7935 9 Skin 0.47 protein_coding synonymous_variant LOW 273C>T Leu91Leu
M0042334 EMIDLBEH_00008 8001 9 Skin 0.47 protein_coding synonymous_variant LOW 207C>T Tyr69Tyr
M0042335 EMIDLBEH_00008 8139 7 Skin 0.37 protein_coding synonymous_variant LOW 69G>T Leu23Leu
M0042336 EMIDLBEH_00009 8426 7 Skin 0.37 protein_coding synonymous_variant LOW 1410C>T Gly470Gly
M0042337 EMIDLBEH_00001 507 5 Skin 0.26 protein_coding downstream_gene_variant MODIFIER *30A>G None
M0042338 EMIDLBEH_00001 724 3 Skin 0.16 protein_coding downstream_gene_variant MODIFIER *247T>C None
M0042339 EMIDLBEH_00001 1139 5 Skin 0.26 protein_coding downstream_gene_variant MODIFIER *662C>T None
M0042340 EMIDLBEH_00001 1306 3 Skin 0.16 protein_coding downstream_gene_variant MODIFIER *829T>C None
M0042341 EMIDLBEH_00002 1485 7 Skin 0.37 protein_coding synonymous_variant LOW 111T>C Asp37Asp
M0042342 EMIDLBEH_00003 1924 7 Skin 0.37 protein_coding missense_variant MODERATE 1900A>G Thr634Ala
M0042343 EMIDLBEH_00003 2012 7 Skin 0.37 protein_coding synonymous_variant LOW 1812C>T Ile604Ile
M0042344 EMIDLBEH_00003 2015 7 Skin 0.37 protein_coding synonymous_variant LOW 1809C>T Asp603Asp
M0042345 EMIDLBEH_00003 2042 4 Skin 0.21 protein_coding synonymous_variant LOW 1782C>G Ser594Ser
M0042346 EMIDLBEH_00003 2170 7 Skin 0.37 protein_coding missense_variant MODERATE 1654A>G Ser552Gly
M0042347 EMIDLBEH_00003 2189 7 Skin 0.37 protein_coding synonymous_variant LOW 1635C>A Gly545Gly
M0042348 EMIDLBEH_00003 2306 7 Skin 0.37 protein_coding synonymous_variant LOW 1518T>C Ala506Ala
M0042349 EMIDLBEH_00003 2468 7 Skin 0.37 protein_coding synonymous_variant LOW 1356G>A Ala452Ala
M0042350 EMIDLBEH_00003 2498 7 Skin 0.37 protein_coding synonymous_variant LOW 1326T>C Arg442Arg
M0042351 EMIDLBEH_00003 2527 7 Skin 0.37 protein_coding missense_variant MODERATE 1297A>G Met433Val
M0042352 EMIDLBEH_00003 2546 6 Skin 0.32 protein_coding synonymous_variant LOW 1278G>A Gly426Gly
M0042353 EMIDLBEH_00003 2630 6 Skin 0.32 protein_coding synonymous_variant LOW 1194C>T Gly398Gly
M0042354 EMIDLBEH_00003 2675 7 Skin 0.37 protein_coding synonymous_variant LOW 1149A>C Ala383Ala
M0042355 EMIDLBEH_00003 2774 7 Skin 0.37 protein_coding synonymous_variant LOW 1050T>C Ala350Ala
M0042356 EMIDLBEH_00003 3368 3 Skin 0.16 protein_coding synonymous_variant LOW 456G>T Leu152Leu
M0042357 EMIDLBEH_00009 8567 7 Skin 0.37 protein_coding synonymous_variant LOW 1269G>T Gly423Gly
M0042358 EMIDLBEH_00009 8603 6 Skin 0.32 protein_coding synonymous_variant LOW 1233C>G Ser411Ser
M0042359 EMIDLBEH_00009 9176 5 Skin 0.26 protein_coding synonymous_variant LOW 660T>C Val220Val
M0042360 EMIDLBEH_00004 4064 4 Skin 0.21 protein_coding synonymous_variant LOW 328C>A Arg110Arg
M0042361 EMIDLBEH_00004 4065 4 Skin 0.21 protein_coding synonymous_variant LOW 327C>T Asp109Asp
M0042362 EMIDLBEH_00004 4332 4 Skin 0.21 protein_coding synonymous_variant LOW 60G>C Val20Val
M0042363 EMIDLBEH_00002 6104 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4509A>G None
M0042364 EMIDLBEH_00002 6106 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4511C>T None
M0042365 EMIDLBEH_00006 6691 4 Skin 0.21 protein_coding synonymous_variant LOW 576C>T Gly192Gly
M0042366 EMIDLBEH_00006 6697 4 Skin 0.21 protein_coding synonymous_variant LOW 570C>T Asn190Asn
M0042367 EMIDLBEH_00006 6790 4 Skin 0.21 protein_coding synonymous_variant LOW 477T>C Phe159Phe
M0042368 EMIDLBEH_00008 7532 3 Skin 0.16 protein_coding synonymous_variant LOW 676T>C Leu226Leu
M0042369 EMIDLBEH_00009 9446 5 Skin 0.26 protein_coding synonymous_variant LOW 390A>C Gly130Gly
M0042370 EMIDLBEH_00009 9494 3 Skin 0.16 protein_coding synonymous_variant LOW 342T>C Phe114Phe
M0042371 EMIDLBEH_00009 9661 5 Skin 0.26 protein_coding missense_variant MODERATE 175T>C Cys59Arg
M0042372 EMIDLBEH_00010 10329 6 Skin 0.32 protein_coding synonymous_variant LOW 321T>A Arg107Arg
M0042373 EMIDLBEH_00010 10486 6 Skin 0.32 protein_coding missense_variant MODERATE 478G>A Val160Ile
M0042374 EMIDLBEH_00002 1520 3 Skin 0.16 protein_coding synonymous_variant LOW 76C>T Leu26Leu
M0042375 EMIDLBEH_00003 1604 4 Skin 0.21 protein_coding synonymous_variant LOW 2220G>C Arg740Arg
M0042376 EMIDLBEH_00003 1745 4 Skin 0.21 protein_coding synonymous_variant LOW 2079C>T Arg693Arg
M0042377 EMIDLBEH_00003 1790 4 Skin 0.21 protein_coding synonymous_variant LOW 2034C>T Leu678Leu
M0042378 EMIDLBEH_00003 1814 4 Skin 0.21 protein_coding synonymous_variant LOW 2010T>C Asp670Asp
M0042379 EMIDLBEH_00003 1941 3 Skin 0.16 protein_coding missense_variant MODERATE 1883A>C Asp628Ala
M0042380 EMIDLBEH_00003 1993 4 Skin 0.21 protein_coding missense_variant MODERATE 1831C>A Pro611Thr
M0042381 EMIDLBEH_00003 2057 6 Skin 0.32 protein_coding synonymous_variant LOW 1767G>A Arg589Arg
M0042382 EMIDLBEH_00003 2060 3 Skin 0.16 protein_coding synonymous_variant LOW 1764G>T Leu588Leu
M0042383 EMIDLBEH_00003 2219 6 Skin 0.32 protein_coding synonymous_variant LOW 1605C>G Leu535Leu
M0042384 EMIDLBEH_00003 2222 6 Skin 0.32 protein_coding synonymous_variant LOW 1602A>G Gln534Gln
M0042385 EMIDLBEH_00010 10237 5 Skin 0.26 protein_coding missense_variant MODERATE 229A>G Ser77Gly
M0042386 EMIDLBEH_00010 10347 4 Skin 0.21 protein_coding synonymous_variant LOW 339G>A Val113Val
M0042387 EMIDLBEH_00008 13031 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4824G>A None
M0042388 EMIDLBEH_00008 13035 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4828G>C None
M0042389 EMIDLBEH_00008 13066 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4859G>T None
M0042390 EMIDLBEH_00008 13078 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4871A>G None
M0042391 EMIDLBEH_00008 13087 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4880G>A None
M0042392 EMIDLBEH_00008 13099 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4892G>A None
M0042393 EMIDLBEH_00013 13155 3 Skin 0.16 protein_coding missense_variant MODERATE 792C>G Asp264Glu
M0042394 EMIDLBEH_00013 13221 3 Skin 0.16 protein_coding synonymous_variant LOW 726C>T Phe242Phe
M0042395 EMIDLBEH_00001 113 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -62A>G None
M0042396 EMIDLBEH_00001 126 3 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -49C>G None
M0042397 EMIDLBEH_00001 209 3 Skin 0.16 protein_coding missense_variant MODERATE 35T>C Val12Ala
M0042398 EMIDLBEH_00001 354 4 Skin 0.21 protein_coding synonymous_variant LOW 180T>C Arg60Arg
M0042399 EMIDLBEH_00001 1057 3 Skin 0.16 protein_coding downstream_gene_variant MODIFIER *580G>T None
M0042400 EMIDLBEH_00011 11367 3 Skin 0.16 protein_coding synonymous_variant LOW 271T>C Leu91Leu
M0042401 EMIDLBEH_00012 12054 3 Skin 0.16 protein_coding synonymous_variant LOW 381G>T Gly127Gly
M0042402 EMIDLBEH_00012 12168 3 Skin 0.16 protein_coding synonymous_variant LOW 495C>G Arg165Arg
M0042403 EMIDLBEH_00012 12195 3 Skin 0.16 protein_coding synonymous_variant LOW 522C>T Asp174Asp
M0042404 EMIDLBEH_00005 5576 3 Skin 0.16 protein_coding synonymous_variant LOW 282G>C Leu94Leu
M0042405 EMIDLBEH_00006 6745 3 Skin 0.16 protein_coding synonymous_variant LOW 522G>A Glu174Glu
M0042406 EMIDLBEH_00010 10535 3 Skin 0.16 protein_coding missense_variant MODERATE 527T>G Leu176Arg






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
EMIDLBEH_00014 ARJ68478.1|GT14 86.6 0 1 523 0.9962 0.9962





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term