Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2536
  Reference Plasmid   1111525849852226_bin.19__k141_861814
  Reference Plasmid Size   20909
  Reference Plasmid GC Content   0.65
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0046668 KEBFCHOI_00001 740 11 Skin 0.15 protein_coding synonymous_variant LOW 876G>T Gly292Gly
M0046669 KEBFCHOI_00001 743 10 Skin 0.13 protein_coding synonymous_variant LOW 873C>T Phe291Phe
M0046670 KEBFCHOI_00001 766 11 Skin 0.15 protein_coding synonymous_variant LOW 850T>C Leu284Leu
M0046671 KEBFCHOI_00001 769 11 Skin 0.15 protein_coding synonymous_variant LOW 847T>C Leu283Leu
M0046672 KEBFCHOI_00001 800 13 Skin 0.17 protein_coding synonymous_variant LOW 816T>C Asn272Asn
M0046673 KEBFCHOI_00001 803 13 Skin 0.17 protein_coding synonymous_variant LOW 813C>G Ala271Ala
M0046674 KEBFCHOI_00001 836 12 Skin 0.16 protein_coding synonymous_variant LOW 780A>G Glu260Glu
M0046675 KEBFCHOI_00001 854 12 Skin 0.16 protein_coding synonymous_variant LOW 762G>C Val254Val
M0046676 KEBFCHOI_00001 856 12 Skin 0.16 protein_coding missense_variant MODERATE 760G>A Val254Met
M0046677 KEBFCHOI_00001 863 12 Skin 0.16 protein_coding synonymous_variant LOW 753C>T Val251Val
M0046678 KEBFCHOI_00001 1124 10 Skin 0.13 protein_coding synonymous_variant LOW 492T>C Thr164Thr
M0046679 KEBFCHOI_00001 1659 12 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -44C>T None
M0046680 KEBFCHOI_00002 1696 9 Skin 0.12 protein_coding missense_variant MODERATE 1207G>T Ala403Ser
M0046681 KEBFCHOI_00002 2432 7 Skin 0.09 protein_coding synonymous_variant LOW 471G>C Ala157Ala
M0046682 KEBFCHOI_00002 2483 12 Skin 0.16 protein_coding synonymous_variant LOW 420G>A Pro140Pro
M0046683 KEBFCHOI_00002 2486 13 Skin 0.17 protein_coding synonymous_variant LOW 417A>G Ser139Ser
M0046684 KEBFCHOI_00003 3480 22 Skin 0.29 protein_coding synonymous_variant LOW 216G>A Glu72Glu
M0046685 KEBFCHOI_00003 3513 22 Skin 0.29 protein_coding synonymous_variant LOW 183C>G Arg61Arg
M0046686 KEBFCHOI_00003 3567 16 Skin 0.21 protein_coding synonymous_variant LOW 129T>C Arg43Arg
M0046687 KEBFCHOI_00004 3800 16 Skin 0.21 protein_coding synonymous_variant LOW 669C>T Arg223Arg
M0046688 KEBFCHOI_00004 4295 19 Skin 0.25 protein_coding synonymous_variant LOW 174T>C Pro58Pro
M0046689 KEBFCHOI_00004 4307 19 Skin 0.25 protein_coding synonymous_variant LOW 162G>A Lys54Lys
M0046690 KEBFCHOI_00001 4779 16 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -3164C>A None
M0046691 KEBFCHOI_00005 4899 20 Skin 0.27 protein_coding synonymous_variant LOW 1164T>C Gly388Gly
M0046692 KEBFCHOI_00005 5067 19 Skin 0.25 protein_coding synonymous_variant LOW 996A>G Glu332Glu
M0046693 KEBFCHOI_00005 5070 20 Skin 0.27 protein_coding synonymous_variant LOW 993C>T Asp331Asp
M0046694 KEBFCHOI_00005 5169 24 Skin 0.32 protein_coding synonymous_variant LOW 894T>C Gly298Gly
M0046695 KEBFCHOI_00005 5571 22 Skin 0.29 protein_coding synonymous_variant LOW 492T>G Leu164Leu
M0046696 KEBFCHOI_00006 6397 53 Skin 0.71 protein_coding synonymous_variant LOW 375C>G Arg125Arg
M0046697 KEBFCHOI_00006 6529 55 Skin 0.73 protein_coding synonymous_variant LOW 243C>G Val81Val
M0046698 KEBFCHOI_00006 6682 53 Skin 0.71 protein_coding synonymous_variant LOW 90C>T Leu30Leu
M0046699 KEBFCHOI_00006 6697 51 Skin 0.68 protein_coding synonymous_variant LOW 75G>A Leu25Leu
M0046700 KEBFCHOI_00007 6916 22 Skin 0.29 protein_coding synonymous_variant LOW 417C>T Asp139Asp
M0046701 KEBFCHOI_00007 7174 36 Skin 0.48 protein_coding synonymous_variant LOW 159C>T Ile53Ile
M0046702 KEBFCHOI_00007 7213 32 Skin 0.43 protein_coding synonymous_variant LOW 120C>T Gly40Gly
M0046703 KEBFCHOI_00007 7216 32 Skin 0.43 protein_coding synonymous_variant LOW 117T>C Thr39Thr
M0046704 KEBFCHOI_00008 7369 16 Skin 0.21 protein_coding missense_variant MODERATE 1142T>C Ile381Thr
M0046705 KEBFCHOI_00008 7515 44 Skin 0.59 protein_coding synonymous_variant LOW 996G>A Glu332Glu
M0046706 KEBFCHOI_00008 7653 21 Skin 0.28 protein_coding synonymous_variant LOW 858C>T Ala286Ala
M0046707 KEBFCHOI_00008 7674 21 Skin 0.28 protein_coding missense_variant MODERATE 837T>G Asp279Glu
M0046708 KEBFCHOI_00008 7809 48 Skin 0.64 protein_coding synonymous_variant LOW 702T>C Gly234Gly
M0046709 KEBFCHOI_00008 7818 48 Skin 0.64 protein_coding synonymous_variant LOW 693T>C Tyr231Tyr
M0046710 KEBFCHOI_00008 7833 48 Skin 0.64 protein_coding synonymous_variant LOW 678T>C Ile226Ile
M0046711 KEBFCHOI_00003 8652 13 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -4957A>G None
M0046712 KEBFCHOI_00005 9815 17 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -3753T>C None
M0046713 KEBFCHOI_00005 9926 21 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3864C>T None
M0046714 KEBFCHOI_00005 9929 21 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3867T>C None
M0046715 KEBFCHOI_00005 9994 22 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -3932C>T None
M0046716 KEBFCHOI_00005 5889 37 Skin 0.49 protein_coding synonymous_variant LOW 174A>G Lys58Lys
M0046717 KEBFCHOI_00006 6771 21 Skin 0.28 protein_coding start_lost HIGH 1A>G Met1?
M0046718 KEBFCHOI_00002 6827 14 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -3925C>T None
M0046719 KEBFCHOI_00010 10658 33 Skin 0.44 protein_coding synonymous_variant LOW 525T>C Ala175Ala
M0046720 KEBFCHOI_00010 10928 13 Skin 0.17 protein_coding synonymous_variant LOW 795A>G Val265Val
M0046721 KEBFCHOI_00010 10931 13 Skin 0.17 protein_coding synonymous_variant LOW 798A>G Val266Val
M0046722 KEBFCHOI_00010 10943 13 Skin 0.17 protein_coding synonymous_variant LOW 810T>C Ile270Ile
M0046723 KEBFCHOI_00010 11090 9 Skin 0.12 protein_coding synonymous_variant LOW 957G>A Lys319Lys
M0046724 KEBFCHOI_00010 11123 9 Skin 0.12 protein_coding synonymous_variant LOW 990A>G Glu330Glu
M0046725 KEBFCHOI_00010 11204 9 Skin 0.12 protein_coding synonymous_variant LOW 1071G>T Leu357Leu
M0046726 KEBFCHOI_00010 11210 9 Skin 0.12 protein_coding synonymous_variant LOW 1077C>T Arg359Arg
M0046727 KEBFCHOI_00010 11231 9 Skin 0.12 protein_coding synonymous_variant LOW 1098C>T Ile366Ile
M0046728 KEBFCHOI_00010 11270 10 Skin 0.13 protein_coding synonymous_variant LOW 1137C>A Gly379Gly
M0046729 KEBFCHOI_00006 11343 10 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4572T>G None
M0046730 KEBFCHOI_00011 12087 7 Skin 0.09 protein_coding synonymous_variant LOW 681G>A Val227Val
M0046731 KEBFCHOI_00011 12099 7 Skin 0.09 protein_coding synonymous_variant LOW 693G>A Glu231Glu
M0046732 KEBFCHOI_00001 111 7 Skin 0.09 protein_coding downstream_gene_variant MODIFIER *617A>G None
M0046733 KEBFCHOI_00001 117 7 Skin 0.09 protein_coding downstream_gene_variant MODIFIER *611T>C None
M0046734 KEBFCHOI_00001 159 10 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *569C>T None
M0046735 KEBFCHOI_00001 192 11 Skin 0.15 protein_coding downstream_gene_variant MODIFIER *536G>C None
M0046736 KEBFCHOI_00001 210 11 Skin 0.15 protein_coding downstream_gene_variant MODIFIER *518C>T None
M0046737 KEBFCHOI_00001 243 10 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *485T>C None
M0046738 KEBFCHOI_00001 302 10 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *426T>C None
M0046739 KEBFCHOI_00001 312 10 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *416G>T None
M0046740 KEBFCHOI_00001 318 10 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *410C>G None
M0046741 KEBFCHOI_00001 327 10 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *401G>C None
M0046742 KEBFCHOI_00001 333 10 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *395T>C None
M0046743 KEBFCHOI_00001 462 7 Skin 0.09 protein_coding downstream_gene_variant MODIFIER *266C>T None
M0046744 KEBFCHOI_00001 477 7 Skin 0.09 protein_coding downstream_gene_variant MODIFIER *251T>C None
M0046745 KEBFCHOI_00001 507 7 Skin 0.09 protein_coding downstream_gene_variant MODIFIER *221C>T None
M0046746 KEBFCHOI_00002 1859 10 Skin 0.13 protein_coding synonymous_variant LOW 1044G>T Gly348Gly
M0046747 KEBFCHOI_00003 3023 17 Skin 0.23 protein_coding synonymous_variant LOW 673T>C Leu225Leu
M0046748 KEBFCHOI_00003 3114 13 Skin 0.17 protein_coding synonymous_variant LOW 582C>A Val194Val
M0046749 KEBFCHOI_00005 5787 22 Skin 0.29 protein_coding synonymous_variant LOW 276G>A Lys92Lys
M0046750 KEBFCHOI_00005 5793 22 Skin 0.29 protein_coding synonymous_variant LOW 270T>C Gly90Gly
M0046751 KEBFCHOI_00005 5802 22 Skin 0.29 protein_coding synonymous_variant LOW 261G>C Gly87Gly
M0046752 KEBFCHOI_00005 5817 22 Skin 0.29 protein_coding synonymous_variant LOW 246C>T Gly82Gly
M0046753 KEBFCHOI_00007 7093 29 Skin 0.39 protein_coding synonymous_variant LOW 240C>T His80His
M0046754 KEBFCHOI_00008 8280 24 Skin 0.32 protein_coding synonymous_variant LOW 231A>G Ser77Ser
M0046755 KEBFCHOI_00008 8436 45 Skin 0.60 protein_coding missense_variant MODERATE 75C>A Asp25Glu
M0046756 KEBFCHOI_00009 9304 26 Skin 0.35 protein_coding synonymous_variant LOW 510G>A Lys170Lys
M0046757 KEBFCHOI_00003 3264 15 Skin 0.20 protein_coding synonymous_variant LOW 432A>G Gln144Gln
M0046758 KEBFCHOI_00003 3651 13 Skin 0.17 protein_coding synonymous_variant LOW 45T>G Leu15Leu
M0046759 KEBFCHOI_00005 5016 23 Skin 0.31 protein_coding synonymous_variant LOW 1047C>G Pro349Pro
M0046760 KEBFCHOI_00005 5354 16 Skin 0.21 protein_coding synonymous_variant LOW 709C>T Leu237Leu
M0046761 KEBFCHOI_00005 5358 16 Skin 0.21 protein_coding synonymous_variant LOW 705T>C Gly235Gly
M0046762 KEBFCHOI_00005 6007 16 Skin 0.21 protein_coding missense_variant MODERATE 56C>T Ala19Val
M0046763 KEBFCHOI_00005 10032 20 Skin 0.27 protein_coding upstream_gene_variant MODIFIER -3970G>C None
M0046764 KEBFCHOI_00005 10042 20 Skin 0.27 protein_coding upstream_gene_variant MODIFIER -3980C>T None
M0046765 KEBFCHOI_00005 10084 22 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -4022A>C None
M0046766 KEBFCHOI_00010 10139 19 Skin 0.25 protein_coding synonymous_variant LOW 6C>T Asn2Asn
M0046767 KEBFCHOI_00010 10196 21 Skin 0.28 protein_coding synonymous_variant LOW 63C>G Val21Val
M0046768 KEBFCHOI_00010 10205 21 Skin 0.28 protein_coding synonymous_variant LOW 72C>T Phe24Phe
M0046769 KEBFCHOI_00010 10218 21 Skin 0.28 protein_coding missense_variant MODERATE 85C>A Leu29Met
M0046770 KEBFCHOI_00010 10220 21 Skin 0.28 protein_coding synonymous_variant LOW 87G>C Leu29Leu
M0046771 KEBFCHOI_00010 10223 21 Skin 0.28 protein_coding synonymous_variant LOW 90G>T Ala30Ala
M0046772 KEBFCHOI_00010 10235 21 Skin 0.28 protein_coding synonymous_variant LOW 102G>A Glu34Glu
M0046773 KEBFCHOI_00010 10244 21 Skin 0.28 protein_coding synonymous_variant LOW 111C>T Asp37Asp
M0046774 KEBFCHOI_00001 636 9 Skin 0.12 protein_coding downstream_gene_variant MODIFIER *92A>G None
M0046775 KEBFCHOI_00001 678 11 Skin 0.15 protein_coding downstream_gene_variant MODIFIER *50C>T None
M0046776 KEBFCHOI_00001 965 9 Skin 0.12 protein_coding synonymous_variant LOW 651G>A Ala217Ala
M0046777 KEBFCHOI_00001 998 7 Skin 0.09 protein_coding synonymous_variant LOW 618G>C Val206Val
M0046778 KEBFCHOI_00001 1502 14 Skin 0.19 protein_coding synonymous_variant LOW 114G>C Gly38Gly
M0046779 KEBFCHOI_00002 2216 20 Skin 0.27 protein_coding synonymous_variant LOW 687T>C Ala229Ala
M0046780 KEBFCHOI_00004 3877 12 Skin 0.16 protein_coding missense_variant MODERATE 592A>G Asn198Asp
M0046781 KEBFCHOI_00004 4124 9 Skin 0.12 protein_coding synonymous_variant LOW 345T>C His115His
M0046782 KEBFCHOI_00004 4127 9 Skin 0.12 protein_coding synonymous_variant LOW 342T>C Phe114Phe
M0046783 KEBFCHOI_00004 4160 9 Skin 0.12 protein_coding synonymous_variant LOW 309T>C Arg103Arg
M0046784 KEBFCHOI_00004 4196 11 Skin 0.15 protein_coding synonymous_variant LOW 273G>A Ala91Ala
M0046785 KEBFCHOI_00004 4202 11 Skin 0.15 protein_coding synonymous_variant LOW 267T>A Ile89Ile
M0046786 KEBFCHOI_00004 4205 11 Skin 0.15 protein_coding synonymous_variant LOW 264A>G Gln88Gln
M0046787 KEBFCHOI_00004 4214 11 Skin 0.15 protein_coding synonymous_variant LOW 255G>C Arg85Arg
M0046788 KEBFCHOI_00005 4963 43 Skin 0.57 protein_coding missense_variant MODERATE 1100T>C Val367Ala
M0046789 KEBFCHOI_00005 5451 14 Skin 0.19 protein_coding synonymous_variant LOW 612T>C Thr204Thr
M0046790 KEBFCHOI_00005 5468 14 Skin 0.19 protein_coding missense_variant MODERATE 595A>G Ser199Gly
M0046791 KEBFCHOI_00008 8157 26 Skin 0.35 protein_coding synonymous_variant LOW 354C>T Cys118Cys
M0046792 KEBFCHOI_00010 10727 11 Skin 0.15 protein_coding synonymous_variant LOW 594C>T Phe198Phe
M0046793 KEBFCHOI_00010 10823 18 Skin 0.24 protein_coding synonymous_variant LOW 690G>C Leu230Leu
M0046794 KEBFCHOI_00010 11177 15 Skin 0.20 protein_coding synonymous_variant LOW 1044T>C Tyr348Tyr
M0046795 KEBFCHOI_00011 11679 14 Skin 0.19 protein_coding synonymous_variant LOW 273A>G Val91Val
M0046796 KEBFCHOI_00011 11688 14 Skin 0.19 protein_coding synonymous_variant LOW 282A>T Gly94Gly
M0046797 KEBFCHOI_00011 11730 12 Skin 0.16 protein_coding synonymous_variant LOW 324C>T Asn108Asn
M0046798 KEBFCHOI_00011 11772 12 Skin 0.16 protein_coding synonymous_variant LOW 366A>G Val122Val
M0046799 KEBFCHOI_00011 12387 6 Skin 0.08 protein_coding synonymous_variant LOW 981C>G Leu327Leu
M0046800 KEBFCHOI_00011 12405 6 Skin 0.08 protein_coding synonymous_variant LOW 999T>C His333His
M0046801 KEBFCHOI_00005 5121 23 Skin 0.31 protein_coding synonymous_variant LOW 942T>C Gly314Gly
M0046802 KEBFCHOI_00006 6634 15 Skin 0.20 protein_coding synonymous_variant LOW 138C>G Leu46Leu
M0046803 KEBFCHOI_00008 7587 28 Skin 0.37 protein_coding synonymous_variant LOW 924C>T His308His
M0046804 KEBFCHOI_00010 10964 11 Skin 0.15 protein_coding synonymous_variant LOW 831T>C Gly277Gly
M0046805 KEBFCHOI_00010 10994 9 Skin 0.12 protein_coding synonymous_variant LOW 861G>A Gln287Gln
M0046806 KEBFCHOI_00002 2540 10 Skin 0.13 protein_coding synonymous_variant LOW 363A>G Lys121Lys
M0046807 KEBFCHOI_00002 2615 10 Skin 0.13 protein_coding synonymous_variant LOW 288C>T Asn96Asn
M0046808 KEBFCHOI_00002 2618 10 Skin 0.13 protein_coding synonymous_variant LOW 285C>T Arg95Arg
M0046809 KEBFCHOI_00006 6442 18 Skin 0.24 protein_coding synonymous_variant LOW 330G>C Ala110Ala
M0046810 KEBFCHOI_00010 10265 3 Skin 0.04 protein_coding synonymous_variant LOW 132T>C Ala44Ala
M0046811 KEBFCHOI_00005 5403 16 Skin 0.21 protein_coding synonymous_variant LOW 660T>C Gly220Gly
M0046812 KEBFCHOI_00010 10304 17 Skin 0.23 protein_coding synonymous_variant LOW 171C>T Gly57Gly
M0046813 KEBFCHOI_00010 10307 17 Skin 0.23 protein_coding synonymous_variant LOW 174C>G Val58Val
M0046814 KEBFCHOI_00010 10322 17 Skin 0.23 protein_coding synonymous_variant LOW 189A>G Glu63Glu
M0046815 KEBFCHOI_00010 10340 17 Skin 0.23 protein_coding synonymous_variant LOW 207C>T Leu69Leu
M0046816 KEBFCHOI_00001 375 7 Skin 0.09 protein_coding downstream_gene_variant MODIFIER *353C>T None
M0046817 KEBFCHOI_00002 2105 5 Skin 0.07 protein_coding synonymous_variant LOW 798C>G Gly266Gly
M0046818 KEBFCHOI_00006 6179 17 Skin 0.23 protein_coding missense_variant MODERATE 593G>T Ser198Ile
M0046819 KEBFCHOI_00006 6189 17 Skin 0.23 protein_coding missense_variant MODERATE 583G>A Val195Met
M0046820 KEBFCHOI_00006 6190 17 Skin 0.23 protein_coding synonymous_variant LOW 582C>T Arg194Arg
M0046821 KEBFCHOI_00006 6243 17 Skin 0.23 protein_coding synonymous_variant LOW 529C>T Leu177Leu
M0046822 KEBFCHOI_00005 5712 16 Skin 0.21 protein_coding synonymous_variant LOW 351T>C Asp117Asp
M0046823 KEBFCHOI_00010 10547 12 Skin 0.16 protein_coding synonymous_variant LOW 414C>T Asp138Asp
M0046824 KEBFCHOI_00010 10571 12 Skin 0.16 protein_coding synonymous_variant LOW 438A>C Ala146Ala
M0046825 KEBFCHOI_00010 10604 12 Skin 0.16 protein_coding synonymous_variant LOW 471C>T Gly157Gly
M0046826 KEBFCHOI_00010 10613 12 Skin 0.16 protein_coding synonymous_variant LOW 480T>C Thr160Thr
M0046827 KEBFCHOI_00011 11523 5 Skin 0.07 protein_coding synonymous_variant LOW 117C>T Gly39Gly
M0046828 KEBFCHOI_00011 11532 5 Skin 0.07 protein_coding synonymous_variant LOW 126C>T Ala42Ala
M0046829 KEBFCHOI_00011 11550 6 Skin 0.08 protein_coding synonymous_variant LOW 144C>T His48His
M0046830 KEBFCHOI_00011 11556 6 Skin 0.08 protein_coding synonymous_variant LOW 150G>A Ser50Ser
M0046831 KEBFCHOI_00011 11568 5 Skin 0.07 protein_coding synonymous_variant LOW 162C>G Leu54Leu
M0046832 KEBFCHOI_00011 11589 6 Skin 0.08 protein_coding synonymous_variant LOW 183C>T Asp61Asp
M0046833 KEBFCHOI_00011 12117 6 Skin 0.08 protein_coding synonymous_variant LOW 711G>T Val237Val
M0046834 KEBFCHOI_00011 12489 5 Skin 0.07 protein_coding synonymous_variant LOW 1083A>G Glu361Glu
M0046835 KEBFCHOI_00011 12510 4 Skin 0.05 protein_coding synonymous_variant LOW 1104T>C Ile368Ile
M0046836 KEBFCHOI_00011 12570 4 Skin 0.05 protein_coding synonymous_variant LOW 1164C>T Gly388Gly
M0046837 KEBFCHOI_00002 1961 8 Skin 0.11 protein_coding synonymous_variant LOW 942C>T Thr314Thr
M0046838 KEBFCHOI_00002 1964 8 Skin 0.11 protein_coding synonymous_variant LOW 939C>G Thr313Thr
M0046839 KEBFCHOI_00011 11445 5 Skin 0.07 protein_coding synonymous_variant LOW 39A>G Pro13Pro
M0046840 KEBFCHOI_00011 11862 4 Skin 0.05 protein_coding synonymous_variant LOW 456A>C Arg152Arg
M0046841 KEBFCHOI_00011 11898 4 Skin 0.05 protein_coding synonymous_variant LOW 492T>C Gly164Gly
M0046842 KEBFCHOI_00011 11901 4 Skin 0.05 protein_coding synonymous_variant LOW 495T>C Arg165Arg
M0046843 KEBFCHOI_00011 11952 4 Skin 0.05 protein_coding synonymous_variant LOW 546C>T Ala182Ala
M0046844 KEBFCHOI_00011 11964 4 Skin 0.05 protein_coding synonymous_variant LOW 558C>T Gly186Gly
M0046845 KEBFCHOI_00011 12708 4 Skin 0.05 protein_coding synonymous_variant LOW 1302C>A Leu434Leu
M0046846 KEBFCHOI_00011 12786 6 Skin 0.08 protein_coding synonymous_variant LOW 1380G>A Glu460Glu
M0046847 KEBFCHOI_00011 12810 4 Skin 0.05 protein_coding synonymous_variant LOW 1404C>T Ser468Ser
M0046848 KEBFCHOI_00011 12972 5 Skin 0.07 protein_coding synonymous_variant LOW 1566C>T Asn522Asn
M0046849 KEBFCHOI_00012 13335 4 Skin 0.05 protein_coding synonymous_variant LOW 264C>T His88His
M0046850 KEBFCHOI_00013 13985 5 Skin 0.07 protein_coding synonymous_variant LOW 117C>T Asp39Asp
M0046851 KEBFCHOI_00013 13990 5 Skin 0.07 protein_coding missense_variant MODERATE 122C>G Thr41Arg
M0046852 KEBFCHOI_00013 13991 5 Skin 0.07 protein_coding synonymous_variant LOW 123G>C Thr41Thr
M0046853 KEBFCHOI_00013 14009 5 Skin 0.07 protein_coding synonymous_variant LOW 141A>G Glu47Glu
M0046854 KEBFCHOI_00013 14019 5 Skin 0.07 protein_coding missense_variant MODERATE 151T>C Cys51Arg
M0046855 KEBFCHOI_00013 14037 5 Skin 0.07 protein_coding missense_variant MODERATE 169G>A Ala57Thr
M0046856 KEBFCHOI_00013 14062 5 Skin 0.07 protein_coding missense_variant MODERATE 194A>G His65Arg
M0046857 KEBFCHOI_00002 1742 3 Skin 0.04 protein_coding synonymous_variant LOW 1161C>T Asp387Asp
M0046858 KEBFCHOI_00008 13033 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4523C>T None
M0046859 KEBFCHOI_00012 13125 3 Skin 0.04 protein_coding synonymous_variant LOW 54G>C Thr18Thr
M0046860 KEBFCHOI_00013 13928 3 Skin 0.04 protein_coding synonymous_variant LOW 60G>A Val20Val
M0046861 KEBFCHOI_00013 14564 3 Skin 0.04 protein_coding synonymous_variant LOW 696T>C Cys232Cys






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term