Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2579
  Reference Plasmid   1111525849853957_bin.30_new__k141_1002619
  Reference Plasmid Size   16763
  Reference Plasmid GC Content   0.48
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0129705 CDPNEBNF_00003 961 4 Oral 0.67 protein_coding synonymous_variant LOW 99C>T Asn33Asn
M0129706 CDPNEBNF_00003 972 4 Oral 0.67 protein_coding synonymous_variant LOW 88C>T Leu30Leu
M0129707 CDPNEBNF_00003 976 3 Oral 0.50 protein_coding synonymous_variant LOW 84C>T Ala28Ala
M0129708 CDPNEBNF_00004 1106 4 Oral 0.67 protein_coding synonymous_variant LOW 1299T>C Pro433Pro
M0129709 CDPNEBNF_00004 1109 4 Oral 0.67 protein_coding synonymous_variant LOW 1296T>A Val432Val
M0129710 CDPNEBNF_00004 1127 3 Oral 0.50 protein_coding synonymous_variant LOW 1278T>C Gly426Gly
M0129711 CDPNEBNF_00004 1145 4 Oral 0.67 protein_coding synonymous_variant LOW 1260T>A Ser420Ser
M0129712 CDPNEBNF_00004 1160 4 Oral 0.67 protein_coding synonymous_variant LOW 1245C>T Val415Val
M0129713 CDPNEBNF_00004 1190 3 Oral 0.50 protein_coding synonymous_variant LOW 1215G>A Thr405Thr
M0129714 CDPNEBNF_00004 1192 4 Oral 0.67 protein_coding missense_variant MODERATE 1213A>G Thr405Ala
M0129715 CDPNEBNF_00004 1229 4 Oral 0.67 protein_coding synonymous_variant LOW 1176G>A Gln392Gln
M0129716 CDPNEBNF_00004 1271 4 Oral 0.67 protein_coding synonymous_variant LOW 1134T>A Leu378Leu
M0129717 CDPNEBNF_00004 1274 4 Oral 0.67 protein_coding synonymous_variant LOW 1131C>T Ile377Ile
M0129718 CDPNEBNF_00004 1301 4 Oral 0.67 protein_coding synonymous_variant LOW 1104T>C Arg368Arg
M0129719 CDPNEBNF_00004 1304 4 Oral 0.67 protein_coding synonymous_variant LOW 1101A>G Val367Val
M0129720 CDPNEBNF_00004 1325 3 Oral 0.50 protein_coding synonymous_variant LOW 1080A>C Gly360Gly
M0129721 CDPNEBNF_00004 1373 3 Oral 0.50 protein_coding synonymous_variant LOW 1032T>C Ile344Ile
M0129722 CDPNEBNF_00004 1442 3 Oral 0.50 protein_coding synonymous_variant LOW 963G>A Ser321Ser
M0129723 CDPNEBNF_00004 1970 3 Oral 0.50 protein_coding synonymous_variant LOW 435T>C Ser145Ser
M0129724 CDPNEBNF_00004 2009 4 Oral 0.67 protein_coding synonymous_variant LOW 396C>T Tyr132Tyr
M0129725 CDPNEBNF_00004 2059 4 Oral 0.67 protein_coding missense_variant MODERATE 346A>C Met116Leu
M0129726 CDPNEBNF_00004 2087 3 Oral 0.50 protein_coding synonymous_variant LOW 318T>C Asp106Asp
M0129727 CDPNEBNF_00004 2096 3 Oral 0.50 protein_coding synonymous_variant LOW 309A>G Lys103Lys
M0129728 CDPNEBNF_00004 2108 4 Oral 0.67 protein_coding synonymous_variant LOW 297G>C Gly99Gly
M0129729 CDPNEBNF_00004 2117 4 Oral 0.67 protein_coding synonymous_variant LOW 288A>G Gln96Gln
M0129730 CDPNEBNF_00004 2174 4 Oral 0.67 protein_coding synonymous_variant LOW 231A>G Gln77Gln
M0129731 CDPNEBNF_00004 2241 3 Oral 0.50 protein_coding missense_variant MODERATE 164C>T Ala55Val
M0129732 CDPNEBNF_00005 2544 4 Oral 0.67 protein_coding synonymous_variant LOW 1365C>T Ala455Ala
M0129733 CDPNEBNF_00005 2643 4 Oral 0.67 protein_coding synonymous_variant LOW 1266C>T Gly422Gly
M0129734 CDPNEBNF_00005 2646 3 Oral 0.50 protein_coding synonymous_variant LOW 1263T>C Ile421Ile
M0129735 CDPNEBNF_00005 2670 4 Oral 0.67 protein_coding synonymous_variant LOW 1239G>A Ala413Ala
M0129736 CDPNEBNF_00005 2687 3 Oral 0.50 protein_coding synonymous_variant LOW 1222C>T Leu408Leu
M0129737 CDPNEBNF_00005 2770 4 Oral 0.67 protein_coding missense_variant MODERATE 1139T>G Leu380Arg
M0129738 CDPNEBNF_00005 2808 5 Oral 0.83 protein_coding synonymous_variant LOW 1101T>C Arg367Arg
M0129739 CDPNEBNF_00005 2811 5 Oral 0.83 protein_coding synonymous_variant LOW 1098A>G Leu366Leu
M0129740 CDPNEBNF_00005 2847 3 Oral 0.50 protein_coding synonymous_variant LOW 1062T>G Leu354Leu
M0129741 CDPNEBNF_00005 2856 3 Oral 0.50 protein_coding synonymous_variant LOW 1053A>G Glu351Glu
M0129742 CDPNEBNF_00005 2874 4 Oral 0.67 protein_coding synonymous_variant LOW 1035A>C Ala345Ala
M0129743 CDPNEBNF_00005 2961 4 Oral 0.67 protein_coding missense_variant MODERATE 948T>G Asp316Glu
M0129744 CDPNEBNF_00005 2985 4 Oral 0.67 protein_coding synonymous_variant LOW 924G>C Leu308Leu
M0129745 CDPNEBNF_00005 2991 4 Oral 0.67 protein_coding synonymous_variant LOW 918A>G Gly306Gly
M0129746 CDPNEBNF_00005 3012 4 Oral 0.67 protein_coding synonymous_variant LOW 897A>G Lys299Lys
M0129747 CDPNEBNF_00005 3027 5 Oral 0.83 protein_coding synonymous_variant LOW 882A>G Ser294Ser
M0129748 CDPNEBNF_00005 3090 4 Oral 0.67 protein_coding synonymous_variant LOW 819T>C Asp273Asp
M0129749 CDPNEBNF_00005 3108 3 Oral 0.50 protein_coding synonymous_variant LOW 801C>T Thr267Thr
M0129750 CDPNEBNF_00005 3153 5 Oral 0.83 protein_coding synonymous_variant LOW 756C>T Ser252Ser
M0129751 CDPNEBNF_00005 3243 3 Oral 0.50 protein_coding synonymous_variant LOW 666T>A Thr222Thr
M0129752 CDPNEBNF_00005 3311 5 Oral 0.83 protein_coding synonymous_variant LOW 598T>C Leu200Leu
M0129753 CDPNEBNF_00005 3546 4 Oral 0.67 protein_coding synonymous_variant LOW 363T>C Asp121Asp
M0129754 CDPNEBNF_00005 3600 3 Oral 0.50 protein_coding synonymous_variant LOW 309T>C Arg103Arg
M0129755 CDPNEBNF_00005 3696 6 Oral 1.00 protein_coding synonymous_variant LOW 213C>T Asp71Asp
M0129756 CDPNEBNF_00005 3699 6 Oral 1.00 protein_coding synonymous_variant LOW 210G>T Ser70Ser
M0129757 CDPNEBNF_00005 3701 6 Oral 1.00 protein_coding missense_variant MODERATE 208T>A Ser70Thr
M0129758 CDPNEBNF_00005 3819 3 Oral 0.50 protein_coding synonymous_variant LOW 90G>A Arg30Arg
M0129759 CDPNEBNF_00005 3858 4 Oral 0.67 protein_coding synonymous_variant LOW 51A>G Val17Val
M0129760 CDPNEBNF_00006 3999 4 Oral 0.67 protein_coding synonymous_variant LOW 2304A>G Lys768Lys
M0129761 CDPNEBNF_00006 4047 3 Oral 0.50 protein_coding synonymous_variant LOW 2256C>T Tyr752Tyr
M0129762 CDPNEBNF_00006 4161 5 Oral 0.83 protein_coding synonymous_variant LOW 2142C>G Val714Val
M0129763 CDPNEBNF_00006 4260 4 Oral 0.67 protein_coding missense_variant MODERATE 2043C>G Asp681Glu
M0129764 CDPNEBNF_00006 4311 4 Oral 0.67 protein_coding synonymous_variant LOW 1992T>C Phe664Phe
M0129765 CDPNEBNF_00006 4371 3 Oral 0.50 protein_coding synonymous_variant LOW 1932A>G Ala644Ala
M0129766 CDPNEBNF_00006 4506 4 Oral 0.67 protein_coding synonymous_variant LOW 1797A>G Arg599Arg
M0129767 CDPNEBNF_00006 4536 3 Oral 0.50 protein_coding synonymous_variant LOW 1767C>T Ala589Ala
M0129768 CDPNEBNF_00006 4548 5 Oral 0.83 protein_coding missense_variant MODERATE 1755T>G Asn585Lys
M0129769 CDPNEBNF_00006 4817 3 Oral 0.50 protein_coding synonymous_variant LOW 1486C>T Leu496Leu
M0129770 CDPNEBNF_00006 4875 5 Oral 0.83 protein_coding synonymous_variant LOW 1428A>G Gly476Gly
M0129771 CDPNEBNF_00006 4893 4 Oral 0.67 protein_coding synonymous_variant LOW 1410G>A Gln470Gln
M0129772 CDPNEBNF_00006 4941 5 Oral 0.83 protein_coding synonymous_variant LOW 1362A>C Gly454Gly
M0129773 CDPNEBNF_00006 4962 5 Oral 0.83 protein_coding synonymous_variant LOW 1341A>T Ser447Ser
M0129774 CDPNEBNF_00006 4995 5 Oral 0.83 protein_coding synonymous_variant LOW 1308C>T Phe436Phe
M0129775 CDPNEBNF_00006 5020 6 Oral 1.00 protein_coding missense_variant MODERATE 1283T>C Val428Ala
M0129776 CDPNEBNF_00006 5045 3 Oral 0.50 protein_coding synonymous_variant LOW 1258T>C Leu420Leu
M0129777 CDPNEBNF_00006 5106 3 Oral 0.50 protein_coding synonymous_variant LOW 1197G>T Val399Val
M0129778 CDPNEBNF_00006 5208 4 Oral 0.67 protein_coding synonymous_variant LOW 1095T>C Phe365Phe
M0129779 CDPNEBNF_00006 5211 4 Oral 0.67 protein_coding synonymous_variant LOW 1092A>C Leu364Leu
M0129780 CDPNEBNF_00006 5220 4 Oral 0.67 protein_coding synonymous_variant LOW 1083T>C Leu361Leu
M0129781 CDPNEBNF_00006 5235 4 Oral 0.67 protein_coding synonymous_variant LOW 1068T>C Ile356Ile
M0129782 CDPNEBNF_00006 5238 4 Oral 0.67 protein_coding synonymous_variant LOW 1065T>C Ser355Ser
M0129783 CDPNEBNF_00006 5304 4 Oral 0.67 protein_coding synonymous_variant LOW 999G>C Gly333Gly
M0129784 CDPNEBNF_00006 5343 4 Oral 0.67 protein_coding synonymous_variant LOW 960G>A Ser320Ser
M0129785 CDPNEBNF_00006 5354 4 Oral 0.67 protein_coding synonymous_variant LOW 949T>C Leu317Leu
M0129786 CDPNEBNF_00006 5367 4 Oral 0.67 protein_coding synonymous_variant LOW 936T>A Ala312Ala
M0129787 CDPNEBNF_00006 5472 5 Oral 0.83 protein_coding synonymous_variant LOW 831T>C Ser277Ser
M0129788 CDPNEBNF_00006 5508 5 Oral 0.83 protein_coding synonymous_variant LOW 795T>G Ala265Ala
M0129789 CDPNEBNF_00006 5511 5 Oral 0.83 protein_coding synonymous_variant LOW 792G>A Leu264Leu
M0129790 CDPNEBNF_00006 5513 4 Oral 0.67 protein_coding synonymous_variant LOW 790C>T Leu264Leu
M0129791 CDPNEBNF_00006 5634 6 Oral 1.00 protein_coding synonymous_variant LOW 669G>T Ala223Ala
M0129792 CDPNEBNF_00006 5667 3 Oral 0.50 protein_coding synonymous_variant LOW 636C>T Asp212Asp
M0129793 CDPNEBNF_00006 5676 4 Oral 0.67 protein_coding synonymous_variant LOW 627C>T Ile209Ile
M0129794 CDPNEBNF_00006 5694 6 Oral 1.00 protein_coding synonymous_variant LOW 609T>A Ile203Ile
M0129795 CDPNEBNF_00006 5718 6 Oral 1.00 protein_coding synonymous_variant LOW 585C>T Leu195Leu
M0129796 CDPNEBNF_00006 5806 6 Oral 1.00 protein_coding missense_variant MODERATE 497T>A Leu166Gln
M0129797 CDPNEBNF_00006 5808 4 Oral 0.67 protein_coding synonymous_variant LOW 495T>C Tyr165Tyr
M0129798 CDPNEBNF_00006 5817 6 Oral 1.00 protein_coding synonymous_variant LOW 486A>G Arg162Arg
M0129799 CDPNEBNF_00006 5842 4 Oral 0.67 protein_coding missense_variant MODERATE 461G>A Gly154Glu
M0129800 CDPNEBNF_00006 5883 5 Oral 0.83 protein_coding synonymous_variant LOW 420T>G Leu140Leu
M0129801 CDPNEBNF_00006 5916 3 Oral 0.50 protein_coding synonymous_variant LOW 387T>C Asp129Asp
M0129802 CDPNEBNF_00006 5964 4 Oral 0.67 protein_coding synonymous_variant LOW 339A>T Gly113Gly
M0129803 CDPNEBNF_00006 6021 3 Oral 0.50 protein_coding synonymous_variant LOW 282G>A Thr94Thr
M0129804 CDPNEBNF_00006 6075 4 Oral 0.67 protein_coding synonymous_variant LOW 228T>G Val76Val
M0129805 CDPNEBNF_00006 6081 6 Oral 1.00 protein_coding synonymous_variant LOW 222T>C Tyr74Tyr
M0129806 CDPNEBNF_00006 6120 6 Oral 1.00 protein_coding synonymous_variant LOW 183A>G Val61Val
M0129807 CDPNEBNF_00006 6170 4 Oral 0.67 protein_coding missense_variant MODERATE 133G>A Ala45Thr
M0129808 CDPNEBNF_00006 6173 4 Oral 0.67 protein_coding synonymous_variant LOW 130T>C Leu44Leu
M0129809 CDPNEBNF_00006 6207 6 Oral 1.00 protein_coding synonymous_variant LOW 96C>T Asp32Asp
M0129810 CDPNEBNF_00007 6403 3 Oral 0.50 protein_coding synonymous_variant LOW 372C>T Tyr124Tyr
M0129811 CDPNEBNF_00007 6424 6 Oral 1.00 protein_coding synonymous_variant LOW 351A>G Ser117Ser
M0129812 CDPNEBNF_00007 6454 4 Oral 0.67 protein_coding missense_variant MODERATE 321T>G Asp107Glu
M0129813 CDPNEBNF_00007 6463 5 Oral 0.83 protein_coding synonymous_variant LOW 312T>C Asp104Asp
M0129814 CDPNEBNF_00007 6466 6 Oral 1.00 protein_coding missense_variant MODERATE 309G>T Leu103Phe
M0129815 CDPNEBNF_00007 6565 6 Oral 1.00 protein_coding synonymous_variant LOW 210T>G Val70Val
M0129816 CDPNEBNF_00007 6590 6 Oral 1.00 protein_coding missense_variant MODERATE 185T>G Leu62Trp
M0129817 CDPNEBNF_00007 6651 5 Oral 0.83 protein_coding missense_variant MODERATE 124G>A Val42Ile
M0129818 CDPNEBNF_00008 6864 3 Oral 0.50 protein_coding synonymous_variant LOW 1437A>T Pro479Pro
M0129819 CDPNEBNF_00008 6888 4 Oral 0.67 protein_coding synonymous_variant LOW 1413T>C Ala471Ala
M0129820 CDPNEBNF_00008 6909 3 Oral 0.50 protein_coding synonymous_variant LOW 1392G>A Ala464Ala
M0129821 CDPNEBNF_00008 6981 4 Oral 0.67 protein_coding synonymous_variant LOW 1320T>C Ser440Ser
M0129822 CDPNEBNF_00008 7025 6 Oral 1.00 protein_coding synonymous_variant LOW 1276T>C Leu426Leu
M0129823 CDPNEBNF_00008 7043 5 Oral 0.83 protein_coding missense_variant MODERATE 1258C>A Gln420Lys
M0129824 CDPNEBNF_00008 7167 5 Oral 0.83 protein_coding synonymous_variant LOW 1134A>G Arg378Arg
M0129825 CDPNEBNF_00008 7188 6 Oral 1.00 protein_coding synonymous_variant LOW 1113T>C Tyr371Tyr
M0129826 CDPNEBNF_00008 7194 6 Oral 1.00 protein_coding synonymous_variant LOW 1107C>T Val369Val
M0129827 CDPNEBNF_00008 7197 4 Oral 0.67 protein_coding synonymous_variant LOW 1104T>G Ala368Ala
M0129828 CDPNEBNF_00008 7227 6 Oral 1.00 protein_coding synonymous_variant LOW 1074A>G Leu358Leu
M0129829 CDPNEBNF_00008 7233 5 Oral 0.83 protein_coding synonymous_variant LOW 1068G>A Leu356Leu
M0129830 CDPNEBNF_00008 7235 5 Oral 0.83 protein_coding synonymous_variant LOW 1066T>C Leu356Leu
M0129831 CDPNEBNF_00008 7305 6 Oral 1.00 protein_coding synonymous_variant LOW 996A>G Gln332Gln
M0129832 CDPNEBNF_00008 7311 5 Oral 0.83 protein_coding synonymous_variant LOW 990T>C Gly330Gly
M0129833 CDPNEBNF_00008 7329 6 Oral 1.00 protein_coding synonymous_variant LOW 972T>C Gly324Gly
M0129834 CDPNEBNF_00008 7373 6 Oral 1.00 protein_coding synonymous_variant LOW 928T>C Leu310Leu
M0129835 CDPNEBNF_00008 7377 6 Oral 1.00 protein_coding synonymous_variant LOW 924C>G Arg308Arg
M0129836 CDPNEBNF_00008 7386 6 Oral 1.00 protein_coding synonymous_variant LOW 915T>A Gly305Gly
M0129837 CDPNEBNF_00008 7537 3 Oral 0.50 protein_coding missense_variant MODERATE 764A>T Tyr255Phe
M0129838 CDPNEBNF_00008 7547 3 Oral 0.50 protein_coding synonymous_variant LOW 754T>C Leu252Leu
M0129839 CDPNEBNF_00008 7576 3 Oral 0.50 protein_coding missense_variant MODERATE 725A>G Gln242Arg
M0129840 CDPNEBNF_00008 7584 3 Oral 0.50 protein_coding synonymous_variant LOW 717A>C Gly239Gly
M0129841 CDPNEBNF_00008 7598 3 Oral 0.50 protein_coding synonymous_variant LOW 703T>C Leu235Leu
M0129842 CDPNEBNF_00008 7602 3 Oral 0.50 protein_coding synonymous_variant LOW 699T>C Val233Val
M0129843 CDPNEBNF_00008 7670 6 Oral 1.00 protein_coding missense_variant MODERATE 631G>A Val211Ile
M0129844 CDPNEBNF_00008 7686 5 Oral 0.83 protein_coding synonymous_variant LOW 615T>C Asp205Asp
M0129845 CDPNEBNF_00008 7689 5 Oral 0.83 protein_coding synonymous_variant LOW 612A>G Ala204Ala
M0129846 CDPNEBNF_00008 7698 3 Oral 0.50 protein_coding synonymous_variant LOW 603C>A Gly201Gly
M0129847 CDPNEBNF_00008 7704 3 Oral 0.50 protein_coding synonymous_variant LOW 597G>A Gln199Gln
M0129848 CDPNEBNF_00008 7707 6 Oral 1.00 protein_coding synonymous_variant LOW 594T>C Ile198Ile
M0129849 CDPNEBNF_00008 7785 3 Oral 0.50 protein_coding synonymous_variant LOW 516T>C Asn172Asn
M0129850 CDPNEBNF_00008 7803 6 Oral 1.00 protein_coding synonymous_variant LOW 498G>A Lys166Lys
M0129851 CDPNEBNF_00008 7809 4 Oral 0.67 protein_coding synonymous_variant LOW 492T>A Ser164Ser
M0129852 CDPNEBNF_00008 7815 6 Oral 1.00 protein_coding missense_variant MODERATE 486G>C Met162Ile
M0129853 CDPNEBNF_00008 7842 4 Oral 0.67 protein_coding synonymous_variant LOW 459G>T Gly153Gly
M0129854 CDPNEBNF_00008 7929 5 Oral 0.83 protein_coding synonymous_variant LOW 372C>T Asp124Asp
M0129855 CDPNEBNF_00008 7938 3 Oral 0.50 protein_coding synonymous_variant LOW 363G>A Gln121Gln
M0129856 CDPNEBNF_00008 7941 4 Oral 0.67 protein_coding synonymous_variant LOW 360T>A Gly120Gly
M0129857 CDPNEBNF_00008 7973 4 Oral 0.67 protein_coding missense_variant MODERATE 328C>G Leu110Val
M0129858 CDPNEBNF_00008 8076 3 Oral 0.50 protein_coding synonymous_variant LOW 225A>G Thr75Thr
M0129859 CDPNEBNF_00008 8118 4 Oral 0.67 protein_coding synonymous_variant LOW 183T>C Ile61Ile
M0129860 CDPNEBNF_00008 8136 5 Oral 0.83 protein_coding synonymous_variant LOW 165A>G Val55Val
M0129861 CDPNEBNF_00008 8280 6 Oral 1.00 protein_coding synonymous_variant LOW 21A>C Ile7Ile
M0129862 CDPNEBNF_00009 8374 4 Oral 0.67 protein_coding synonymous_variant LOW 1497T>C Ser499Ser
M0129863 CDPNEBNF_00009 8437 5 Oral 0.83 protein_coding synonymous_variant LOW 1434G>A Leu478Leu
M0129864 CDPNEBNF_00009 8461 4 Oral 0.67 protein_coding synonymous_variant LOW 1410C>T Tyr470Tyr
M0129865 CDPNEBNF_00009 8488 6 Oral 1.00 protein_coding missense_variant MODERATE 1383A>C Glu461Asp
M0129866 CDPNEBNF_00009 8572 3 Oral 0.50 protein_coding synonymous_variant LOW 1299C>T Ile433Ile
M0129867 CDPNEBNF_00009 8629 4 Oral 0.67 protein_coding synonymous_variant LOW 1242A>G Lys414Lys
M0129868 CDPNEBNF_00009 8695 5 Oral 0.83 protein_coding synonymous_variant LOW 1176G>C Arg392Arg
M0129869 CDPNEBNF_00009 8785 3 Oral 0.50 protein_coding synonymous_variant LOW 1086T>C Ala362Ala
M0129870 CDPNEBNF_00009 8854 6 Oral 1.00 protein_coding synonymous_variant LOW 1017T>C Ala339Ala
M0129871 CDPNEBNF_00009 8911 3 Oral 0.50 protein_coding synonymous_variant LOW 960T>C Arg320Arg
M0129872 CDPNEBNF_00009 8914 4 Oral 0.67 protein_coding synonymous_variant LOW 957T>C Arg319Arg
M0129873 CDPNEBNF_00009 9013 5 Oral 0.83 protein_coding synonymous_variant LOW 858T>C Asp286Asp
M0129874 CDPNEBNF_00009 9069 5 Oral 0.83 protein_coding missense_variant MODERATE 802T>C Ser268Pro
M0129875 CDPNEBNF_00009 9088 5 Oral 0.83 protein_coding synonymous_variant LOW 783A>C Arg261Arg
M0129876 CDPNEBNF_00005 3339 5 Oral 0.83 protein_coding synonymous_variant LOW 570G>A Pro190Pro
M0129877 CDPNEBNF_00005 3405 3 Oral 0.50 protein_coding synonymous_variant LOW 504C>T Asn168Asn
M0129878 CDPNEBNF_00005 3407 3 Oral 0.50 protein_coding missense_variant MODERATE 502A>C Asn168His
M0129879 CDPNEBNF_00005 3459 3 Oral 0.50 protein_coding synonymous_variant LOW 450G>A Glu150Glu
M0129880 CDPNEBNF_00005 3462 3 Oral 0.50 protein_coding synonymous_variant LOW 447C>T Ser149Ser
M0129881 CDPNEBNF_00005 3663 3 Oral 0.50 protein_coding synonymous_variant LOW 246T>C Asp82Asp
M0129882 CDPNEBNF_00006 4265 3 Oral 0.50 protein_coding missense_variant MODERATE 2038T>C Ser680Pro
M0129883 CDPNEBNF_00006 4524 3 Oral 0.50 protein_coding synonymous_variant LOW 1779T>C Ser593Ser
M0129884 CDPNEBNF_00006 4791 3 Oral 0.50 protein_coding synonymous_variant LOW 1512T>C Gly504Gly
M0129885 CDPNEBNF_00006 4800 3 Oral 0.50 protein_coding synonymous_variant LOW 1503T>A Ala501Ala
M0129886 CDPNEBNF_00006 4809 3 Oral 0.50 protein_coding synonymous_variant LOW 1494G>A Pro498Pro
M0129887 CDPNEBNF_00006 4905 4 Oral 0.67 protein_coding synonymous_variant LOW 1398G>C Ala466Ala
M0129888 CDPNEBNF_00006 4929 3 Oral 0.50 protein_coding synonymous_variant LOW 1374T>C Asn458Asn
M0129889 CDPNEBNF_00007 6400 3 Oral 0.50 protein_coding synonymous_variant LOW 375A>C Pro125Pro
M0129890 CDPNEBNF_00007 6495 3 Oral 0.50 protein_coding missense_variant MODERATE 280T>G Ser94Ala
M0129891 CDPNEBNF_00007 6505 3 Oral 0.50 protein_coding synonymous_variant LOW 270C>T Thr90Thr
M0129892 CDPNEBNF_00007 6586 4 Oral 0.67 protein_coding synonymous_variant LOW 189T>C Asn63Asn
M0129893 CDPNEBNF_00007 6625 3 Oral 0.50 protein_coding synonymous_variant LOW 150C>T Ala50Ala
M0129894 CDPNEBNF_00007 6769 3 Oral 0.50 protein_coding missense_variant MODERATE 6C>A Asn2Lys
M0129895 CDPNEBNF_00008 6951 3 Oral 0.50 protein_coding synonymous_variant LOW 1350A>G Lys450Lys
M0129896 CDPNEBNF_00008 7113 4 Oral 0.67 protein_coding synonymous_variant LOW 1188C>T Gly396Gly
M0129897 CDPNEBNF_00008 7215 5 Oral 0.83 protein_coding synonymous_variant LOW 1086G>A Ser362Ser
M0129898 CDPNEBNF_00008 7221 4 Oral 0.67 protein_coding synonymous_variant LOW 1080C>G Gly360Gly
M0129899 CDPNEBNF_00008 7236 3 Oral 0.50 protein_coding synonymous_variant LOW 1065T>C Asp355Asp
M0129900 CDPNEBNF_00008 7308 5 Oral 0.83 protein_coding synonymous_variant LOW 993C>T Ser331Ser
M0129901 CDPNEBNF_00008 7320 4 Oral 0.67 protein_coding synonymous_variant LOW 981T>C Phe327Phe
M0129902 CDPNEBNF_00008 7902 3 Oral 0.50 protein_coding synonymous_variant LOW 399T>C Val133Val
M0129903 CDPNEBNF_00008 8010 3 Oral 0.50 protein_coding synonymous_variant LOW 291C>T Cys97Cys
M0129904 CDPNEBNF_00008 8022 3 Oral 0.50 protein_coding synonymous_variant LOW 279C>T Leu93Leu
M0129905 CDPNEBNF_00008 8235 3 Oral 0.50 protein_coding synonymous_variant LOW 66G>A Pro22Pro
M0129906 CDPNEBNF_00009 8647 4 Oral 0.67 protein_coding synonymous_variant LOW 1224C>T Asp408Asp
M0129907 CDPNEBNF_00009 8719 3 Oral 0.50 protein_coding missense_variant MODERATE 1152A>C Gln384His
M0129908 CDPNEBNF_00009 8720 4 Oral 0.67 protein_coding missense_variant MODERATE 1151A>G Gln384Arg
M0129909 CDPNEBNF_00009 8812 4 Oral 0.67 protein_coding synonymous_variant LOW 1059A>G Thr353Thr
M0129910 CDPNEBNF_00009 8851 4 Oral 0.67 protein_coding synonymous_variant LOW 1020C>T Ile340Ile
M0129911 CDPNEBNF_00009 8853 3 Oral 0.50 protein_coding missense_variant MODERATE 1018A>G Ile340Val
M0129912 CDPNEBNF_00009 8982 4 Oral 0.67 protein_coding missense_variant MODERATE 889A>G Arg297Gly
M0129913 CDPNEBNF_00009 9214 4 Oral 0.67 protein_coding synonymous_variant LOW 657T>C His219His
M0129914 CDPNEBNF_00009 9235 3 Oral 0.50 protein_coding synonymous_variant LOW 636A>G Leu212Leu
M0129915 CDPNEBNF_00009 9241 4 Oral 0.67 protein_coding synonymous_variant LOW 630A>G Pro210Pro
M0129916 CDPNEBNF_00009 9249 4 Oral 0.67 protein_coding synonymous_variant LOW 622A>C Arg208Arg
M0129917 CDPNEBNF_00009 9300 3 Oral 0.50 protein_coding missense_variant MODERATE 571G>A Val191Ile
M0129918 CDPNEBNF_00009 9355 4 Oral 0.67 protein_coding synonymous_variant LOW 516A>G Leu172Leu
M0129919 CDPNEBNF_00009 9379 3 Oral 0.50 protein_coding synonymous_variant LOW 492G>T Gly164Gly
M0129920 CDPNEBNF_00009 9382 3 Oral 0.50 protein_coding missense_variant MODERATE 489G>T Glu163Asp
M0129921 CDPNEBNF_00009 9391 4 Oral 0.67 protein_coding synonymous_variant LOW 480C>T Tyr160Tyr
M0129922 CDPNEBNF_00009 9397 4 Oral 0.67 protein_coding synonymous_variant LOW 474T>C Ile158Ile
M0129923 CDPNEBNF_00009 9445 4 Oral 0.67 protein_coding synonymous_variant LOW 426A>G Gln142Gln
M0129924 CDPNEBNF_00009 9537 4 Oral 0.67 protein_coding missense_variant MODERATE 334G>A Val112Ile
M0129925 CDPNEBNF_00009 9562 4 Oral 0.67 protein_coding synonymous_variant LOW 309C>T Cys103Cys
M0129926 CDPNEBNF_00009 9571 4 Oral 0.67 protein_coding synonymous_variant LOW 300G>A Glu100Glu
M0129927 CDPNEBNF_00009 9793 3 Oral 0.50 protein_coding synonymous_variant LOW 78T>C Ser26Ser
M0129928 CDPNEBNF_00009 9810 4 Oral 0.67 protein_coding missense_variant MODERATE 61A>G Ile21Val
M0129929 CDPNEBNF_00009 9828 4 Oral 0.67 protein_coding missense_variant MODERATE 43A>G Ile15Val
M0129930 CDPNEBNF_00010 9948 5 Oral 0.83 protein_coding synonymous_variant LOW 1155A>G Gly385Gly
M0129931 CDPNEBNF_00010 10029 4 Oral 0.67 protein_coding synonymous_variant LOW 1074T>C Gly358Gly
M0129932 CDPNEBNF_00010 10176 5 Oral 0.83 protein_coding synonymous_variant LOW 927A>C Ile309Ile
M0129933 CDPNEBNF_00010 10200 3 Oral 0.50 protein_coding synonymous_variant LOW 903G>A Ala301Ala
M0129934 CDPNEBNF_00010 10215 3 Oral 0.50 protein_coding synonymous_variant LOW 888C>T Thr296Thr
M0129935 CDPNEBNF_00010 10227 5 Oral 0.83 protein_coding synonymous_variant LOW 876T>C Leu292Leu
M0129936 CDPNEBNF_00010 10242 5 Oral 0.83 protein_coding synonymous_variant LOW 861T>A Pro287Pro
M0129937 CDPNEBNF_00010 10281 5 Oral 0.83 protein_coding synonymous_variant LOW 822A>G Leu274Leu
M0129938 CDPNEBNF_00010 10293 4 Oral 0.67 protein_coding synonymous_variant LOW 810A>G Pro270Pro
M0129939 CDPNEBNF_00010 10296 4 Oral 0.67 protein_coding synonymous_variant LOW 807A>G Gln269Gln
M0129940 CDPNEBNF_00010 10299 3 Oral 0.50 protein_coding synonymous_variant LOW 804C>T Leu268Leu
M0129941 CDPNEBNF_00010 10368 5 Oral 0.83 protein_coding synonymous_variant LOW 735T>G Gly245Gly
M0129942 CDPNEBNF_00010 10416 3 Oral 0.50 protein_coding synonymous_variant LOW 687T>A Arg229Arg
M0129943 CDPNEBNF_00010 10419 3 Oral 0.50 protein_coding synonymous_variant LOW 684C>T Asn228Asn
M0129944 CDPNEBNF_00010 10458 3 Oral 0.50 protein_coding synonymous_variant LOW 645T>C Ser215Ser
M0129945 CDPNEBNF_00010 10491 5 Oral 0.83 protein_coding synonymous_variant LOW 612T>C Val204Val
M0129946 CDPNEBNF_00010 10518 4 Oral 0.67 protein_coding synonymous_variant LOW 585A>G Leu195Leu
M0129947 CDPNEBNF_00010 10524 5 Oral 0.83 protein_coding synonymous_variant LOW 579G>T Leu193Leu
M0129948 CDPNEBNF_00010 10527 5 Oral 0.83 protein_coding synonymous_variant LOW 576T>A Ser192Ser
M0129949 CDPNEBNF_00010 10539 5 Oral 0.83 protein_coding synonymous_variant LOW 564A>G Leu188Leu
M0129950 CDPNEBNF_00010 10569 5 Oral 0.83 protein_coding synonymous_variant LOW 534A>G Pro178Pro
M0129951 CDPNEBNF_00010 10617 3 Oral 0.50 protein_coding synonymous_variant LOW 486T>G Leu162Leu
M0129952 CDPNEBNF_00010 10619 3 Oral 0.50 protein_coding missense_variant MODERATE 484C>T Leu162Phe
M0129953 CDPNEBNF_00010 10662 3 Oral 0.50 protein_coding synonymous_variant LOW 441C>T Thr147Thr
M0129954 CDPNEBNF_00010 10745 5 Oral 0.83 protein_coding synonymous_variant LOW 358T>C Leu120Leu
M0129955 CDPNEBNF_00010 10752 3 Oral 0.50 protein_coding synonymous_variant LOW 351G>A Ala117Ala
M0129956 CDPNEBNF_00010 10758 3 Oral 0.50 protein_coding synonymous_variant LOW 345C>T Ser115Ser
M0129957 CDPNEBNF_00010 10770 5 Oral 0.83 protein_coding synonymous_variant LOW 333T>C Ala111Ala
M0129958 CDPNEBNF_00010 10833 5 Oral 0.83 protein_coding synonymous_variant LOW 270A>C Gly90Gly
M0129959 CDPNEBNF_00010 10875 5 Oral 0.83 protein_coding synonymous_variant LOW 228G>T Ser76Ser
M0129960 CDPNEBNF_00011 11144 5 Oral 0.83 protein_coding synonymous_variant LOW 996T>C Val332Val
M0129961 CDPNEBNF_00011 11192 5 Oral 0.83 protein_coding synonymous_variant LOW 948A>G Lys316Lys
M0129962 CDPNEBNF_00011 11200 5 Oral 0.83 protein_coding synonymous_variant LOW 940T>C Leu314Leu
M0129963 CDPNEBNF_00011 11240 4 Oral 0.67 protein_coding synonymous_variant LOW 900G>A Glu300Glu
M0129964 CDPNEBNF_00011 11246 5 Oral 0.83 protein_coding synonymous_variant LOW 894T>A Ala298Ala
M0129965 CDPNEBNF_00011 11264 5 Oral 0.83 protein_coding synonymous_variant LOW 876T>C Ile292Ile
M0129966 CDPNEBNF_00011 11315 5 Oral 0.83 protein_coding synonymous_variant LOW 825T>C Arg275Arg
M0129967 CDPNEBNF_00011 11318 5 Oral 0.83 protein_coding synonymous_variant LOW 822C>T Ile274Ile
M0129968 CDPNEBNF_00011 11408 3 Oral 0.50 protein_coding synonymous_variant LOW 732T>C Tyr244Tyr
M0129969 CDPNEBNF_00011 11453 5 Oral 0.83 protein_coding synonymous_variant LOW 687A>G Leu229Leu
M0129970 CDPNEBNF_00011 11456 5 Oral 0.83 protein_coding synonymous_variant LOW 684C>G Gly228Gly
M0129971 CDPNEBNF_00011 11459 4 Oral 0.67 protein_coding synonymous_variant LOW 681A>G Leu227Leu
M0129972 CDPNEBNF_00011 11662 5 Oral 0.83 protein_coding synonymous_variant LOW 478C>T Leu160Leu
M0129973 CDPNEBNF_00011 11722 4 Oral 0.67 protein_coding missense_variant MODERATE 418T>G Ser140Ala
M0129974 CDPNEBNF_00011 11735 4 Oral 0.67 protein_coding synonymous_variant LOW 405A>G Arg135Arg
M0129975 CDPNEBNF_00011 11763 4 Oral 0.67 protein_coding missense_variant MODERATE 377T>C Val126Ala
M0129976 CDPNEBNF_00011 11768 4 Oral 0.67 protein_coding synonymous_variant LOW 372C>A Ser124Ser
M0129977 CDPNEBNF_00011 11777 4 Oral 0.67 protein_coding synonymous_variant LOW 363T>C Tyr121Tyr
M0129978 CDPNEBNF_00011 11783 4 Oral 0.67 protein_coding synonymous_variant LOW 357C>T Asp119Asp
M0129979 CDPNEBNF_00011 11834 3 Oral 0.50 protein_coding synonymous_variant LOW 306G>A Val102Val
M0129980 CDPNEBNF_00011 11861 4 Oral 0.67 protein_coding synonymous_variant LOW 279T>C Ala93Ala
M0129981 CDPNEBNF_00011 11948 4 Oral 0.67 protein_coding synonymous_variant LOW 192C>T Tyr64Tyr
M0129982 CDPNEBNF_00011 11969 3 Oral 0.50 protein_coding synonymous_variant LOW 171C>T Gly57Gly
M0129983 CDPNEBNF_00011 11981 3 Oral 0.50 protein_coding synonymous_variant LOW 159C>T Thr53Thr
M0129984 CDPNEBNF_00011 11982 3 Oral 0.50 protein_coding missense_variant MODERATE 158C>G Thr53Ser
M0129985 CDPNEBNF_00011 11983 3 Oral 0.50 protein_coding missense_variant MODERATE 157A>C Thr53Pro
M0129986 CDPNEBNF_00011 11987 3 Oral 0.50 protein_coding missense_variant MODERATE 153G>C Met51Ile
M0129987 CDPNEBNF_00011 11989 3 Oral 0.50 protein_coding missense_variant MODERATE 151A>C Met51Leu
M0129988 CDPNEBNF_00012 12204 3 Oral 0.50 protein_coding synonymous_variant LOW 3177C>T Asp1059Asp
M0129989 CDPNEBNF_00012 12273 3 Oral 0.50 protein_coding missense_variant MODERATE 3108G>C Arg1036Ser
M0129990 CDPNEBNF_00012 12279 4 Oral 0.67 protein_coding synonymous_variant LOW 3102G>A Gly1034Gly
M0129991 CDPNEBNF_00012 12330 4 Oral 0.67 protein_coding synonymous_variant LOW 3051G>A Arg1017Arg
M0129992 CDPNEBNF_00012 12398 4 Oral 0.67 protein_coding synonymous_variant LOW 2983T>C Leu995Leu
M0129993 CDPNEBNF_00012 12495 3 Oral 0.50 protein_coding synonymous_variant LOW 2886A>G Gly962Gly
M0129994 CDPNEBNF_00012 12498 4 Oral 0.67 protein_coding synonymous_variant LOW 2883C>T Asp961Asp
M0129995 CDPNEBNF_00012 12504 4 Oral 0.67 protein_coding synonymous_variant LOW 2877T>C Leu959Leu
M0129996 CDPNEBNF_00012 12607 3 Oral 0.50 protein_coding missense_variant MODERATE 2774T>C Met925Thr
M0129997 CDPNEBNF_00012 12705 3 Oral 0.50 protein_coding synonymous_variant LOW 2676C>T His892His
M0129998 CDPNEBNF_00012 12789 3 Oral 0.50 protein_coding synonymous_variant LOW 2592A>G Glu864Glu
M0129999 CDPNEBNF_00012 12858 3 Oral 0.50 protein_coding synonymous_variant LOW 2523T>C Ile841Ile
M0130000 CDPNEBNF_00012 12867 3 Oral 0.50 protein_coding synonymous_variant LOW 2514A>G Gly838Gly
M0130001 CDPNEBNF_00012 13018 3 Oral 0.50 protein_coding missense_variant MODERATE 2363C>T Ala788Val
M0130002 CDPNEBNF_00012 13026 3 Oral 0.50 protein_coding synonymous_variant LOW 2355T>C Asn785Asn
M0130003 CDPNEBNF_00012 13072 3 Oral 0.50 protein_coding missense_variant MODERATE 2309A>G Asn770Ser
M0130004 CDPNEBNF_00012 13098 3 Oral 0.50 protein_coding synonymous_variant LOW 2283C>T Ala761Ala
M0130005 CDPNEBNF_00012 13122 3 Oral 0.50 protein_coding synonymous_variant LOW 2259C>T Asn753Asn
M0130006 CDPNEBNF_00012 13124 3 Oral 0.50 protein_coding missense_variant MODERATE 2257A>G Asn753Asp
M0130007 CDPNEBNF_00012 13128 3 Oral 0.50 protein_coding synonymous_variant LOW 2253A>C Val751Val
M0130008 CDPNEBNF_00012 13365 3 Oral 0.50 protein_coding synonymous_variant LOW 2016A>G Leu672Leu
M0130009 CDPNEBNF_00012 13422 3 Oral 0.50 protein_coding synonymous_variant LOW 1959C>G Arg653Arg
M0130010 CDPNEBNF_00012 13423 3 Oral 0.50 protein_coding missense_variant MODERATE 1958G>A Arg653His
M0130011 CDPNEBNF_00012 14208 3 Oral 0.50 protein_coding synonymous_variant LOW 1173T>G Val391Val
M0130012 CDPNEBNF_00012 15324 3 Oral 0.50 protein_coding synonymous_variant LOW 57G>A Thr19Thr
M0130013 CDPNEBNF_00010 15412 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -4310T>A None
M0130014 CDPNEBNF_00010 15413 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -4311A>T None
M0130015 CDPNEBNF_00010 15434 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -4332G>T None
M0130016 CDPNEBNF_00010 15454 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -4352A>G None
M0130017 CDPNEBNF_00010 15586 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -4484C>T None
M0130018 CDPNEBNF_00010 15609 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -4507C>T None
M0130019 CDPNEBNF_00013 15899 3 Oral 0.50 protein_coding missense_variant MODERATE 690A>C Arg230Ser
M0130020 CDPNEBNF_00013 16094 3 Oral 0.50 protein_coding synonymous_variant LOW 495A>C Ile165Ile
M0130021 CDPNEBNF_00001 271 3 Oral 0.50 protein_coding synonymous_variant LOW 210T>A Pro70Pro
M0130022 CDPNEBNF_00001 286 3 Oral 0.50 protein_coding synonymous_variant LOW 195C>T Ile65Ile
M0130023 CDPNEBNF_00001 337 3 Oral 0.50 protein_coding synonymous_variant LOW 144T>C Arg48Arg
M0130024 CDPNEBNF_00001 349 3 Oral 0.50 protein_coding synonymous_variant LOW 132T>C Phe44Phe
M0130025 CDPNEBNF_00001 400 3 Oral 0.50 protein_coding synonymous_variant LOW 81C>A Pro27Pro
M0130026 CDPNEBNF_00001 448 3 Oral 0.50 protein_coding synonymous_variant LOW 33C>T Phe11Phe
M0130027 CDPNEBNF_00001 469 3 Oral 0.50 protein_coding synonymous_variant LOW 12T>C Tyr4Tyr
M0130028 CDPNEBNF_00001 496 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -16A>G None
M0130029 CDPNEBNF_00001 564 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -84T>G None
M0130030 CDPNEBNF_00001 600 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -120A>G None
M0130031 CDPNEBNF_00001 635 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -155T>C None
M0130032 CDPNEBNF_00001 638 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -158C>T None
M0130033 CDPNEBNF_00001 653 3 Oral 0.50 protein_coding upstream_gene_variant MODIFIER -173A>C None
M0130034 CDPNEBNF_00002 661 3 Oral 0.50 protein_coding missense_variant MODERATE 215A>C Tyr72Ser
M0130035 CDPNEBNF_00004 1217 3 Oral 0.50 protein_coding synonymous_variant LOW 1188T>C Phe396Phe
M0130036 CDPNEBNF_00004 2144 3 Oral 0.50 protein_coding synonymous_variant LOW 261G>A Glu87Glu
M0130037 CDPNEBNF_00005 2556 3 Oral 0.50 protein_coding synonymous_variant LOW 1353T>C Asp451Asp
M0130038 CDPNEBNF_00005 2583 3 Oral 0.50 protein_coding synonymous_variant LOW 1326G>A Leu442Leu
M0130039 CDPNEBNF_00005 2661 3 Oral 0.50 protein_coding synonymous_variant LOW 1248G>C Ser416Ser
M0130040 CDPNEBNF_00005 2754 3 Oral 0.50 protein_coding synonymous_variant LOW 1155A>G Ala385Ala
M0130041 CDPNEBNF_00005 3264 3 Oral 0.50 protein_coding synonymous_variant LOW 645G>A Val215Val
M0130042 CDPNEBNF_00005 3303 4 Oral 0.67 protein_coding synonymous_variant LOW 606T>C Arg202Arg
M0130043 CDPNEBNF_00005 3450 4 Oral 0.67 protein_coding synonymous_variant LOW 459G>A Ala153Ala
M0130044 CDPNEBNF_00005 3879 3 Oral 0.50 protein_coding synonymous_variant LOW 30C>T Ile10Ile
M0130045 CDPNEBNF_00006 4044 3 Oral 0.50 protein_coding synonymous_variant LOW 2259C>T Tyr753Tyr
M0130046 CDPNEBNF_00006 5076 3 Oral 0.50 protein_coding synonymous_variant LOW 1227T>C Tyr409Tyr
M0130047 CDPNEBNF_00006 5370 3 Oral 0.50 protein_coding synonymous_variant LOW 933A>G Glu311Glu
M0130048 CDPNEBNF_00006 5475 3 Oral 0.50 protein_coding synonymous_variant LOW 828T>C Phe276Phe
M0130049 CDPNEBNF_00006 5490 3 Oral 0.50 protein_coding synonymous_variant LOW 813C>T Asp271Asp
M0130050 CDPNEBNF_00006 5562 3 Oral 0.50 protein_coding synonymous_variant LOW 741C>T Tyr247Tyr
M0130051 CDPNEBNF_00006 5565 3 Oral 0.50 protein_coding synonymous_variant LOW 738C>T Asp246Asp
M0130052 CDPNEBNF_00006 5715 3 Oral 0.50 protein_coding synonymous_variant LOW 588T>C Ser196Ser
M0130053 CDPNEBNF_00006 5721 3 Oral 0.50 protein_coding synonymous_variant LOW 582T>C Tyr194Tyr
M0130054 CDPNEBNF_00006 6146 3 Oral 0.50 protein_coding synonymous_variant LOW 157T>C Leu53Leu
M0130055 CDPNEBNF_00007 6631 3 Oral 0.50 protein_coding synonymous_variant LOW 144A>G Leu48Leu
M0130056 CDPNEBNF_00008 6822 3 Oral 0.50 protein_coding synonymous_variant LOW 1479C>T Phe493Phe
M0130057 CDPNEBNF_00009 8385 3 Oral 0.50 protein_coding synonymous_variant LOW 1486C>T Leu496Leu
M0130058 CDPNEBNF_00010 10650 3 Oral 0.50 protein_coding synonymous_variant LOW 453C>T Ile151Ile
M0130059 CDPNEBNF_00010 10740 4 Oral 0.67 protein_coding synonymous_variant LOW 363C>T Asn121Asn
M0130060 CDPNEBNF_00010 10832 3 Oral 0.50 protein_coding synonymous_variant LOW 271T>C Leu91Leu
M0130061 CDPNEBNF_00011 11588 3 Oral 0.50 protein_coding synonymous_variant LOW 552T>C Ile184Ile
M0130062 CDPNEBNF_00011 11618 3 Oral 0.50 protein_coding synonymous_variant LOW 522C>G Ala174Ala
M0130063 CDPNEBNF_00011 11636 3 Oral 0.50 protein_coding synonymous_variant LOW 504A>G Ala168Ala
M0130064 CDPNEBNF_00011 11912 3 Oral 0.50 protein_coding synonymous_variant LOW 228C>T Asn76Asn
M0130065 CDPNEBNF_00005 3306 3 Oral 0.50 protein_coding synonymous_variant LOW 603T>C Val201Val
M0130066 CDPNEBNF_00010 10095 3 Oral 0.50 protein_coding synonymous_variant LOW 1008C>G Arg336Arg
M0130067 CDPNEBNF_00010 11007 3 Oral 0.50 protein_coding synonymous_variant LOW 96T>C Pro32Pro
M0130068 CDPNEBNF_00011 11538 3 Oral 0.50 protein_coding missense_variant MODERATE 602T>C Leu201Ser






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
CDPNEBNF_00004 SQF34421.1|GT8 97.8 0 1 450 1 1
CDPNEBNF_00005 ABN44265.1|GT4 99 0 1 506 1 1
CDPNEBNF_00011 QKQ44148.1|GT113 98.8 9.25e-243 1 334 1 1
CDPNEBNF_00012 QKQ44149.1|GT101|GT8 97.6 0 1 1074 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
CDPNEBNF_00001 1.E.14.1.15 71.7 4.8e-37 1 120 0.9524 1.0000 1 Channels/Pores 1.E Holins 1.E.14 The CidA/LrgA Holin (CidA/LrgA Holin) Family
CDPNEBNF_00006 3.A.5.10.1 81.3 0 1 793 1.0000 1.9484 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.5 The General Secretory Pathway (Sec) Family
CDPNEBNF_00008 3.A.5.10.1 74.5 2.5e-238 1 509 1.0000 1.2531 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.5 The General Secretory Pathway (Sec) Family
CDPNEBNF_00009 3.A.5.10.1 76 3.4e-238 1 526 1.0000 1.2924 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.5 The General Secretory Pathway (Sec) Family
CDPNEBNF_00010 3.A.5.10.1 75.9 6.4e-168 1 406 0.9975 0.9975 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.5 The General Secretory Pathway (Sec) Family