Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2617
  Reference Plasmid   1111525849857917_bin.11__k141_190320
  Reference Plasmid Size   11833
  Reference Plasmid GC Content   0.63
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0049004 IGDOFKHK_00010 9814 26 Skin 0.25 protein_coding synonymous_variant LOW 1059C>T Arg353Arg
M0049005 IGDOFKHK_00010 10041 12 Skin 0.11 protein_coding synonymous_variant LOW 832C>T Leu278Leu
M0049006 IGDOFKHK_00010 10443 18 Skin 0.17 protein_coding synonymous_variant LOW 430T>C Leu144Leu
M0049007 IGDOFKHK_00010 10705 9 Skin 0.09 protein_coding synonymous_variant LOW 168C>T Pro56Pro
M0049008 IGDOFKHK_00010 10723 29 Skin 0.28 protein_coding synonymous_variant LOW 150T>C Ala50Ala
M0049009 IGDOFKHK_00010 10732 29 Skin 0.28 protein_coding synonymous_variant LOW 141C>T Ile47Ile
M0049010 IGDOFKHK_00006 10929 10 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3885G>C None
M0049011 IGDOFKHK_00006 11000 11 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3956G>A None
M0049012 IGDOFKHK_00006 11055 31 Skin 0.30 protein_coding upstream_gene_variant MODIFIER -4011G>C None
M0049013 IGDOFKHK_00011 11325 11 Skin 0.10 protein_coding missense_variant MODERATE 410C>T Thr137Met
M0049014 IGDOFKHK_00011 11336 9 Skin 0.09 protein_coding synonymous_variant LOW 399G>A Glu133Glu
M0049015 IGDOFKHK_00011 11344 9 Skin 0.09 protein_coding synonymous_variant LOW 391C>T Leu131Leu
M0049016 IGDOFKHK_00011 11348 9 Skin 0.09 protein_coding synonymous_variant LOW 387A>G Glu129Glu
M0049017 IGDOFKHK_00011 11351 9 Skin 0.09 protein_coding synonymous_variant LOW 384T>C Val128Val
M0049018 IGDOFKHK_00011 11450 20 Skin 0.19 protein_coding synonymous_variant LOW 285G>T Leu95Leu
M0049019 IGDOFKHK_00011 11519 22 Skin 0.21 protein_coding synonymous_variant LOW 216A>C Ser72Ser
M0049020 IGDOFKHK_00011 11523 22 Skin 0.21 protein_coding missense_variant MODERATE 212G>A Gly71Asp
M0049021 IGDOFKHK_00011 11734 31 Skin 0.30 protein_coding initiator_codon_variant LOW 1A>C Met1?
M0049022 IGDOFKHK_00001 543 44 Skin 0.42 protein_coding missense_variant MODERATE 1234A>G Ile412Val
M0049023 IGDOFKHK_00001 565 44 Skin 0.42 protein_coding synonymous_variant LOW 1212C>T Ser404Ser
M0049024 IGDOFKHK_00001 583 44 Skin 0.42 protein_coding synonymous_variant LOW 1194G>A Ala398Ala
M0049025 IGDOFKHK_00001 763 23 Skin 0.22 protein_coding synonymous_variant LOW 1014C>T Tyr338Tyr
M0049026 IGDOFKHK_00001 1118 20 Skin 0.19 protein_coding missense_variant MODERATE 659A>G Asn220Ser
M0049027 IGDOFKHK_00001 1119 20 Skin 0.19 protein_coding missense_variant MODERATE 658A>G Asn220Asp
M0049028 IGDOFKHK_00001 1120 20 Skin 0.19 protein_coding synonymous_variant LOW 657C>T Asn219Asn
M0049029 IGDOFKHK_00001 1539 52 Skin 0.50 protein_coding missense_variant MODERATE 238A>G Thr80Ala
M0049030 IGDOFKHK_00001 1811 19 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -35T>C None
M0049031 IGDOFKHK_00001 1825 21 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -49C>T None
M0049032 IGDOFKHK_00001 1855 21 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -79G>C None
M0049033 IGDOFKHK_00002 1922 22 Skin 0.21 protein_coding synonymous_variant LOW 1185G>A Ser395Ser
M0049034 IGDOFKHK_00002 1925 22 Skin 0.21 protein_coding synonymous_variant LOW 1182A>G Ala394Ala
M0049035 IGDOFKHK_00002 2041 19 Skin 0.18 protein_coding synonymous_variant LOW 1066T>C Leu356Leu
M0049036 IGDOFKHK_00002 2159 41 Skin 0.39 protein_coding synonymous_variant LOW 948A>G Ala316Ala
M0049037 IGDOFKHK_00003 3605 20 Skin 0.19 protein_coding synonymous_variant LOW 567T>C Tyr189Tyr
M0049038 IGDOFKHK_00003 3614 20 Skin 0.19 protein_coding synonymous_variant LOW 558T>C Asn186Asn
M0049039 IGDOFKHK_00003 3674 20 Skin 0.19 protein_coding synonymous_variant LOW 498C>G Ser166Ser
M0049040 IGDOFKHK_00003 4057 26 Skin 0.25 protein_coding missense_variant MODERATE 115G>A Ala39Thr
M0049041 IGDOFKHK_00004 4390 35 Skin 0.33 protein_coding synonymous_variant LOW 144C>A Gly48Gly
M0049042 IGDOFKHK_00004 4396 35 Skin 0.33 protein_coding synonymous_variant LOW 138T>C Ile46Ile
M0049043 IGDOFKHK_00004 4426 35 Skin 0.33 protein_coding synonymous_variant LOW 108T>C Arg36Arg
M0049044 IGDOFKHK_00005 4683 41 Skin 0.39 protein_coding synonymous_variant LOW 987C>T Phe329Phe
M0049045 IGDOFKHK_00005 4899 39 Skin 0.37 protein_coding synonymous_variant LOW 771C>T Asp257Asp
M0049046 IGDOFKHK_00005 4909 39 Skin 0.37 protein_coding missense_variant MODERATE 761A>G Asn254Ser
M0049047 IGDOFKHK_00005 4917 39 Skin 0.37 protein_coding synonymous_variant LOW 753A>C Ser251Ser
M0049048 IGDOFKHK_00005 5010 45 Skin 0.43 protein_coding synonymous_variant LOW 660T>C Ile220Ile
M0049049 IGDOFKHK_00005 5030 43 Skin 0.41 protein_coding missense_variant MODERATE 640A>G Ile214Val
M0049050 IGDOFKHK_00005 5127 34 Skin 0.32 protein_coding synonymous_variant LOW 543C>T His181His
M0049051 IGDOFKHK_00005 5130 34 Skin 0.32 protein_coding missense_variant MODERATE 540G>C Lys180Asn
M0049052 IGDOFKHK_00005 5154 35 Skin 0.33 protein_coding synonymous_variant LOW 516T>C Ala172Ala
M0049053 IGDOFKHK_00005 5184 33 Skin 0.31 protein_coding synonymous_variant LOW 486C>T Arg162Arg
M0049054 IGDOFKHK_00005 5550 28 Skin 0.27 protein_coding synonymous_variant LOW 120G>A Gln40Gln
M0049055 IGDOFKHK_00005 5561 28 Skin 0.27 protein_coding missense_variant MODERATE 109G>A Val37Ile
M0049056 IGDOFKHK_00006 6254 15 Skin 0.14 protein_coding missense_variant MODERATE 791G>C Cys264Ser
M0049057 IGDOFKHK_00006 6326 32 Skin 0.30 protein_coding missense_variant MODERATE 719C>G Ala240Gly
M0049058 IGDOFKHK_00001 105 4 Skin 0.04 protein_coding downstream_gene_variant MODIFIER *409T>C None
M0049059 IGDOFKHK_00001 133 12 Skin 0.11 protein_coding downstream_gene_variant MODIFIER *381A>G None
M0049060 IGDOFKHK_00001 175 5 Skin 0.05 protein_coding downstream_gene_variant MODIFIER *339A>G None
M0049061 IGDOFKHK_00001 241 6 Skin 0.06 protein_coding downstream_gene_variant MODIFIER *273T>C None
M0049062 IGDOFKHK_00001 287 10 Skin 0.10 protein_coding downstream_gene_variant MODIFIER *227T>C None
M0049063 IGDOFKHK_00001 296 10 Skin 0.10 protein_coding downstream_gene_variant MODIFIER *218G>A None
M0049064 IGDOFKHK_00001 345 9 Skin 0.09 protein_coding downstream_gene_variant MODIFIER *169A>C None
M0049065 IGDOFKHK_00001 348 9 Skin 0.09 protein_coding downstream_gene_variant MODIFIER *166C>A None
M0049066 IGDOFKHK_00001 350 11 Skin 0.10 protein_coding downstream_gene_variant MODIFIER *164G>A None
M0049067 IGDOFKHK_00001 910 9 Skin 0.09 protein_coding synonymous_variant LOW 867C>T Gly289Gly
M0049068 IGDOFKHK_00001 1062 13 Skin 0.12 protein_coding missense_variant MODERATE 715C>A Arg239Ser
M0049069 IGDOFKHK_00001 1219 17 Skin 0.16 protein_coding synonymous_variant LOW 558T>C Asn186Asn
M0049070 IGDOFKHK_00001 1222 17 Skin 0.16 protein_coding synonymous_variant LOW 555C>T Arg185Arg
M0049071 IGDOFKHK_00003 3479 20 Skin 0.19 protein_coding synonymous_variant LOW 693C>T Pro231Pro
M0049072 IGDOFKHK_00002 3065 51 Skin 0.49 protein_coding synonymous_variant LOW 42T>C Val14Val
M0049073 IGDOFKHK_00002 3074 51 Skin 0.49 protein_coding synonymous_variant LOW 33C>T Ser11Ser
M0049074 IGDOFKHK_00001 3214 12 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -1438G>A None
M0049075 IGDOFKHK_00003 3245 12 Skin 0.11 protein_coding synonymous_variant LOW 927G>A Leu309Leu
M0049076 IGDOFKHK_00003 3251 12 Skin 0.11 protein_coding synonymous_variant LOW 921G>A Arg307Arg
M0049077 IGDOFKHK_00003 3302 18 Skin 0.17 protein_coding synonymous_variant LOW 870A>G Gln290Gln
M0049078 IGDOFKHK_00003 3353 22 Skin 0.21 protein_coding synonymous_variant LOW 819G>A Ala273Ala
M0049079 IGDOFKHK_00003 3356 22 Skin 0.21 protein_coding synonymous_variant LOW 816G>C Ala272Ala
M0049080 IGDOFKHK_00003 3773 14 Skin 0.13 protein_coding synonymous_variant LOW 399C>T Thr133Thr
M0049081 IGDOFKHK_00005 5348 32 Skin 0.30 protein_coding missense_variant MODERATE 322A>G Ile108Val
M0049082 IGDOFKHK_00006 6286 40 Skin 0.38 protein_coding synonymous_variant LOW 759G>C Arg253Arg
M0049083 IGDOFKHK_00006 6673 17 Skin 0.16 protein_coding synonymous_variant LOW 372C>T Gly124Gly
M0049084 IGDOFKHK_00007 7278 19 Skin 0.18 protein_coding missense_variant MODERATE 651T>A Asp217Glu
M0049085 IGDOFKHK_00007 7356 12 Skin 0.11 protein_coding synonymous_variant LOW 573A>G Arg191Arg
M0049086 IGDOFKHK_00007 7359 12 Skin 0.11 protein_coding synonymous_variant LOW 570A>G Pro190Pro
M0049087 IGDOFKHK_00007 7446 23 Skin 0.22 protein_coding synonymous_variant LOW 483C>T Asn161Asn
M0049088 IGDOFKHK_00007 7603 31 Skin 0.30 protein_coding missense_variant MODERATE 326C>T Ala109Val
M0049089 IGDOFKHK_00007 7878 27 Skin 0.26 protein_coding synonymous_variant LOW 51G>A Gln17Gln
M0049090 IGDOFKHK_00007 7893 28 Skin 0.27 protein_coding synonymous_variant LOW 36T>C Ile12Ile
M0049091 IGDOFKHK_00008 8181 19 Skin 0.18 protein_coding synonymous_variant LOW 831T>C Ser277Ser
M0049092 IGDOFKHK_00008 8196 18 Skin 0.17 protein_coding synonymous_variant LOW 816G>A Val272Val
M0049093 IGDOFKHK_00008 8218 18 Skin 0.17 protein_coding missense_variant MODERATE 794A>G Asn265Ser
M0049094 IGDOFKHK_00008 8430 9 Skin 0.09 protein_coding synonymous_variant LOW 582G>A Leu194Leu
M0049095 IGDOFKHK_00008 8436 9 Skin 0.09 protein_coding synonymous_variant LOW 576C>T Leu192Leu
M0049096 IGDOFKHK_00009 9110 21 Skin 0.20 protein_coding missense_variant MODERATE 401C>T Thr134Ile
M0049097 IGDOFKHK_00009 9256 13 Skin 0.12 protein_coding synonymous_variant LOW 255T>C Asp85Asp
M0049098 IGDOFKHK_00001 1573 16 Skin 0.15 protein_coding synonymous_variant LOW 204T>C Phe68Phe
M0049099 IGDOFKHK_00002 2236 17 Skin 0.16 protein_coding missense_variant MODERATE 871G>A Val291Ile
M0049100 IGDOFKHK_00002 2254 17 Skin 0.16 protein_coding missense_variant MODERATE 853A>G Asn285Asp
M0049101 IGDOFKHK_00002 2255 19 Skin 0.18 protein_coding synonymous_variant LOW 852A>G Glu284Glu
M0049102 IGDOFKHK_00005 4569 22 Skin 0.21 protein_coding synonymous_variant LOW 1101G>A Leu367Leu
M0049103 IGDOFKHK_00005 4588 23 Skin 0.22 protein_coding missense_variant MODERATE 1082G>C Ser361Thr
M0049104 IGDOFKHK_00005 4614 21 Skin 0.20 protein_coding synonymous_variant LOW 1056G>C Val352Val
M0049105 IGDOFKHK_00005 5433 21 Skin 0.20 protein_coding synonymous_variant LOW 237A>G Leu79Leu
M0049106 IGDOFKHK_00006 6067 24 Skin 0.23 protein_coding synonymous_variant LOW 978G>A Val326Val
M0049107 IGDOFKHK_00006 6106 24 Skin 0.23 protein_coding synonymous_variant LOW 939A>C Arg313Arg
M0049108 IGDOFKHK_00006 6461 18 Skin 0.17 protein_coding missense_variant MODERATE 584T>A Leu195Gln
M0049109 IGDOFKHK_00006 6496 18 Skin 0.17 protein_coding synonymous_variant LOW 549G>T Val183Val
M0049110 IGDOFKHK_00001 1673 24 Skin 0.23 protein_coding missense_variant MODERATE 104C>G Thr35Arg
M0049111 IGDOFKHK_00001 1699 24 Skin 0.23 protein_coding synonymous_variant LOW 78G>A Ala26Ala
M0049112 IGDOFKHK_00001 1711 24 Skin 0.23 protein_coding synonymous_variant LOW 66T>G Pro22Pro
M0049113 IGDOFKHK_00001 1716 24 Skin 0.23 protein_coding missense_variant MODERATE 61C>T Pro21Ser
M0049114 IGDOFKHK_00001 1735 24 Skin 0.23 protein_coding synonymous_variant LOW 42C>T Ala14Ala
M0049115 IGDOFKHK_00001 1765 21 Skin 0.20 protein_coding synonymous_variant LOW 12A>G Arg4Arg
M0049116 IGDOFKHK_00001 1766 21 Skin 0.20 protein_coding missense_variant MODERATE 11G>A Arg4Lys
M0049117 IGDOFKHK_00005 4731 23 Skin 0.22 protein_coding synonymous_variant LOW 939G>A Ala313Ala
M0049118 IGDOFKHK_00010 10339 16 Skin 0.15 protein_coding synonymous_variant LOW 534T>C Ile178Ile
M0049119 IGDOFKHK_00010 10378 18 Skin 0.17 protein_coding synonymous_variant LOW 495T>C Val165Val
M0049120 IGDOFKHK_00011 11258 12 Skin 0.11 protein_coding synonymous_variant LOW 477C>T Arg159Arg
M0049121 IGDOFKHK_00011 11621 21 Skin 0.20 protein_coding synonymous_variant LOW 114C>T Arg38Arg
M0049122 IGDOFKHK_00002 2318 26 Skin 0.25 protein_coding synonymous_variant LOW 789T>C Gly263Gly
M0049123 IGDOFKHK_00003 3842 20 Skin 0.19 protein_coding synonymous_variant LOW 330T>C Tyr110Tyr
M0049124 IGDOFKHK_00003 3854 20 Skin 0.19 protein_coding synonymous_variant LOW 318G>A Glu106Glu
M0049125 IGDOFKHK_00003 3866 20 Skin 0.19 protein_coding synonymous_variant LOW 306A>T Pro102Pro
M0049126 IGDOFKHK_00003 3872 20 Skin 0.19 protein_coding synonymous_variant LOW 300T>C Gly100Gly
M0049127 IGDOFKHK_00006 6178 26 Skin 0.25 protein_coding synonymous_variant LOW 867T>C Ser289Ser
M0049128 IGDOFKHK_00001 732 21 Skin 0.20 protein_coding missense_variant MODERATE 1045G>A Val349Ile
M0049129 IGDOFKHK_00001 739 21 Skin 0.20 protein_coding synonymous_variant LOW 1038C>T Pro346Pro
M0049130 IGDOFKHK_00002 2822 15 Skin 0.14 protein_coding synonymous_variant LOW 285T>G Ala95Ala
M0049131 IGDOFKHK_00006 5934 24 Skin 0.23 protein_coding synonymous_variant LOW 1111T>C Leu371Leu
M0049132 IGDOFKHK_00006 6574 11 Skin 0.10 protein_coding synonymous_variant LOW 471C>A Gly157Gly
M0049133 IGDOFKHK_00008 8889 11 Skin 0.10 protein_coding synonymous_variant LOW 123C>T Arg41Arg
M0049134 IGDOFKHK_00008 8919 11 Skin 0.10 protein_coding synonymous_variant LOW 93T>C Arg31Arg
M0049135 IGDOFKHK_00008 8958 10 Skin 0.10 protein_coding synonymous_variant LOW 54G>A Glu18Glu
M0049136 IGDOFKHK_00008 8979 10 Skin 0.10 protein_coding synonymous_variant LOW 33T>C Asp11Asp
M0049137 IGDOFKHK_00001 1029 14 Skin 0.13 protein_coding missense_variant MODERATE 748A>G Ser250Gly
M0049138 IGDOFKHK_00002 2612 19 Skin 0.18 protein_coding synonymous_variant LOW 495T>C Arg165Arg
M0049139 IGDOFKHK_00002 2885 14 Skin 0.13 protein_coding synonymous_variant LOW 222C>T Ala74Ala
M0049140 IGDOFKHK_00005 4797 16 Skin 0.15 protein_coding synonymous_variant LOW 873A>G Glu291Glu
M0049141 IGDOFKHK_00005 4803 16 Skin 0.15 protein_coding synonymous_variant LOW 867C>A Ile289Ile
M0049142 IGDOFKHK_00001 1164 11 Skin 0.10 protein_coding missense_variant MODERATE 613T>C Phe205Leu
M0049143 IGDOFKHK_00001 1277 16 Skin 0.15 protein_coding missense_variant MODERATE 500G>A Ser167Asn
M0049144 IGDOFKHK_00001 1285 16 Skin 0.15 protein_coding missense_variant MODERATE 492G>C Met164Ile
M0049145 IGDOFKHK_00004 4270 27 Skin 0.26 protein_coding synonymous_variant LOW 264G>A Pro88Pro
M0049146 IGDOFKHK_00005 5383 34 Skin 0.32 protein_coding missense_variant MODERATE 287T>A Met96Lys
M0049147 IGDOFKHK_00008 8063 12 Skin 0.11 protein_coding missense_variant MODERATE 949G>A Val317Ile
M0049148 IGDOFKHK_00009 9463 5 Skin 0.05 protein_coding synonymous_variant LOW 48A>G Ala16Ala
M0049149 IGDOFKHK_00009 9478 5 Skin 0.05 protein_coding synonymous_variant LOW 33T>C Phe11Phe
M0049150 IGDOFKHK_00009 9496 5 Skin 0.05 protein_coding synonymous_variant LOW 15T>C Tyr5Tyr
M0049151 IGDOFKHK_00010 9514 5 Skin 0.05 protein_coding synonymous_variant LOW 1359G>A Ala453Ala
M0049152 IGDOFKHK_00010 9517 5 Skin 0.05 protein_coding synonymous_variant LOW 1356C>T Gly452Gly
M0049153 IGDOFKHK_00010 9521 5 Skin 0.05 protein_coding missense_variant MODERATE 1352A>G Glu451Gly
M0049154 IGDOFKHK_00010 9529 5 Skin 0.05 protein_coding synonymous_variant LOW 1344C>T Ile448Ile
M0049155 IGDOFKHK_00010 9538 5 Skin 0.05 protein_coding missense_variant MODERATE 1335C>A Asp445Glu
M0049156 IGDOFKHK_00010 9556 5 Skin 0.05 protein_coding synonymous_variant LOW 1317A>C Ala439Ala
M0049157 IGDOFKHK_00010 9574 5 Skin 0.05 protein_coding synonymous_variant LOW 1299G>A Gln433Gln
M0049158 IGDOFKHK_00010 9580 5 Skin 0.05 protein_coding synonymous_variant LOW 1293T>C Tyr431Tyr
M0049159 IGDOFKHK_00010 9601 5 Skin 0.05 protein_coding synonymous_variant LOW 1272T>G Leu424Leu
M0049160 IGDOFKHK_00010 9625 5 Skin 0.05 protein_coding synonymous_variant LOW 1248C>T Gly416Gly
M0049161 IGDOFKHK_00010 9636 5 Skin 0.05 protein_coding missense_variant MODERATE 1237C>A Leu413Met
M0049162 IGDOFKHK_00010 9640 5 Skin 0.05 protein_coding synonymous_variant LOW 1233A>G Gln411Gln
M0049163 IGDOFKHK_00010 9673 6 Skin 0.06 protein_coding synonymous_variant LOW 1200G>A Gly400Gly
M0049164 IGDOFKHK_00010 9679 5 Skin 0.05 protein_coding synonymous_variant LOW 1194T>C Ile398Ile
M0049165 IGDOFKHK_00001 637 13 Skin 0.12 protein_coding synonymous_variant LOW 1140G>A Ser380Ser
M0049166 IGDOFKHK_00001 639 13 Skin 0.12 protein_coding missense_variant MODERATE 1138T>A Ser380Thr
M0049167 IGDOFKHK_00001 1353 15 Skin 0.14 protein_coding missense_variant MODERATE 424T>C Ser142Pro
M0049168 IGDOFKHK_00004 4315 27 Skin 0.26 protein_coding synonymous_variant LOW 219G>A Leu73Leu
M0049169 IGDOFKHK_00001 1399 11 Skin 0.10 protein_coding synonymous_variant LOW 378A>C Leu126Leu
M0049170 IGDOFKHK_00002 7084 10 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3978T>A None
M0049171 IGDOFKHK_00007 7209 19 Skin 0.18 protein_coding synonymous_variant LOW 720T>C Asp240Asp
M0049172 IGDOFKHK_00007 7215 19 Skin 0.18 protein_coding synonymous_variant LOW 714G>A Ala238Ala
M0049173 IGDOFKHK_00007 7401 9 Skin 0.09 protein_coding synonymous_variant LOW 528C>A Ile176Ile
M0049174 IGDOFKHK_00002 7949 9 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4843C>T None
M0049175 IGDOFKHK_00008 8658 9 Skin 0.09 protein_coding synonymous_variant LOW 354A>G Ser118Ser
M0049176 IGDOFKHK_00008 8670 9 Skin 0.09 protein_coding synonymous_variant LOW 342G>A Val114Val
M0049177 IGDOFKHK_00008 8697 11 Skin 0.10 protein_coding synonymous_variant LOW 315A>C Ala105Ala
M0049178 IGDOFKHK_00008 8727 10 Skin 0.10 protein_coding synonymous_variant LOW 285C>A Ala95Ala
M0049179 IGDOFKHK_00008 8754 10 Skin 0.10 protein_coding synonymous_variant LOW 258G>A Glu86Glu
M0049180 IGDOFKHK_00008 8781 10 Skin 0.10 protein_coding synonymous_variant LOW 231T>C Tyr77Tyr
M0049181 IGDOFKHK_00008 8782 10 Skin 0.10 protein_coding missense_variant MODERATE 230A>T Tyr77Phe
M0049182 IGDOFKHK_00010 9763 6 Skin 0.06 protein_coding synonymous_variant LOW 1110T>G Leu370Leu
M0049183 IGDOFKHK_00010 9766 6 Skin 0.06 protein_coding synonymous_variant LOW 1107C>T Asp369Asp
M0049184 IGDOFKHK_00010 9769 6 Skin 0.06 protein_coding synonymous_variant LOW 1104T>C Asp368Asp
M0049185 IGDOFKHK_00008 8289 11 Skin 0.10 protein_coding synonymous_variant LOW 723T>C Ile241Ile
M0049186 IGDOFKHK_00009 9350 3 Skin 0.03 protein_coding missense_variant MODERATE 161A>G Lys54Arg
M0049187 IGDOFKHK_00009 9351 3 Skin 0.03 protein_coding missense_variant MODERATE 160A>C Lys54Gln
M0049188 IGDOFKHK_00009 9352 3 Skin 0.03 protein_coding synonymous_variant LOW 159A>G Gln53Gln
M0049189 IGDOFKHK_00009 9358 3 Skin 0.03 protein_coding synonymous_variant LOW 153C>T Asp51Asp
M0049190 IGDOFKHK_00009 9372 3 Skin 0.03 protein_coding missense_variant MODERATE 139A>C Lys47Gln
M0049191 IGDOFKHK_00009 9376 3 Skin 0.03 protein_coding missense_variant MODERATE 135G>C Glu45Asp
M0049192 IGDOFKHK_00009 9377 3 Skin 0.03 protein_coding missense_variant MODERATE 134A>C Glu45Ala
M0049193 IGDOFKHK_00009 9388 3 Skin 0.03 protein_coding synonymous_variant LOW 123T>C Ala41Ala
M0049194 IGDOFKHK_00009 9403 3 Skin 0.03 protein_coding synonymous_variant LOW 108G>C Thr36Thr
M0049195 IGDOFKHK_00009 9406 3 Skin 0.03 protein_coding synonymous_variant LOW 105G>C Ala35Ala
M0049196 IGDOFKHK_00009 9424 3 Skin 0.03 protein_coding synonymous_variant LOW 87G>A Glu29Glu
M0049197 IGDOFKHK_00010 10827 9 Skin 0.09 protein_coding missense_variant MODERATE 46G>A Glu16Lys
M0049198 IGDOFKHK_00011 11723 9 Skin 0.09 protein_coding synonymous_variant LOW 12T>G Pro4Pro
M0049199 IGDOFKHK_00006 11749 9 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4705C>T None
M0049200 IGDOFKHK_00010 10555 7 Skin 0.07 protein_coding synonymous_variant LOW 318C>T Tyr106Tyr
M0049201 IGDOFKHK_00010 10564 7 Skin 0.07 protein_coding synonymous_variant LOW 309G>A Lys103Lys






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term