Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2633
  Reference Plasmid   1111525849858814_bin.32__k141_14770
  Reference Plasmid Size   24425
  Reference Plasmid GC Content   0.70
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0049808 EOCGPMIC_00001 851 4 Skin 0.17 protein_coding missense_variant MODERATE 835A>C Lys279Gln
M0049809 EOCGPMIC_00001 968 5 Skin 0.21 protein_coding stop_lost&splice_region_variant HIGH 952T>C Ter318Glnext*?
M0049810 EOCGPMIC_00003 983 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -842G>C None
M0049811 EOCGPMIC_00003 1007 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -818T>C None
M0049812 EOCGPMIC_00003 1039 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -786T>C None
M0049813 EOCGPMIC_00002 1051 5 Skin 0.21 protein_coding synonymous_variant LOW 645G>C Leu215Leu
M0049814 EOCGPMIC_00002 1086 5 Skin 0.21 protein_coding missense_variant MODERATE 610A>G Lys204Glu
M0049815 EOCGPMIC_00002 1108 4 Skin 0.17 protein_coding synonymous_variant LOW 588G>C Arg196Arg
M0049816 EOCGPMIC_00002 1651 3 Skin 0.13 protein_coding synonymous_variant LOW 45T>C Ala15Ala
M0049817 EOCGPMIC_00002 1820 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -125C>T None
M0049818 EOCGPMIC_00003 1842 3 Skin 0.13 protein_coding synonymous_variant LOW 18C>G Ala6Ala
M0049819 EOCGPMIC_00003 1907 4 Skin 0.17 protein_coding missense_variant MODERATE 83A>G Gln28Arg
M0049820 EOCGPMIC_00003 1932 4 Skin 0.17 protein_coding synonymous_variant LOW 108C>T Val36Val
M0049821 EOCGPMIC_00003 1935 4 Skin 0.17 protein_coding missense_variant MODERATE 111G>C Glu37Asp
M0049822 EOCGPMIC_00003 2064 3 Skin 0.13 protein_coding synonymous_variant LOW 240C>G Thr80Thr
M0049823 EOCGPMIC_00004 2110 4 Skin 0.17 protein_coding missense_variant MODERATE 18C>G Asp6Glu
M0049824 EOCGPMIC_00004 2275 5 Skin 0.21 protein_coding synonymous_variant LOW 183C>G Val61Val
M0049825 EOCGPMIC_00004 2302 5 Skin 0.21 protein_coding synonymous_variant LOW 210A>C Ala70Ala
M0049826 EOCGPMIC_00004 2446 6 Skin 0.25 protein_coding synonymous_variant LOW 354C>G Ser118Ser
M0049827 EOCGPMIC_00004 2469 3 Skin 0.13 protein_coding missense_variant MODERATE 377G>T Arg126Leu
M0049828 EOCGPMIC_00004 2504 3 Skin 0.13 protein_coding missense_variant MODERATE 412G>A Glu138Lys
M0049829 EOCGPMIC_00004 2545 6 Skin 0.25 protein_coding synonymous_variant LOW 453T>C His151His
M0049830 EOCGPMIC_00005 2811 5 Skin 0.21 protein_coding synonymous_variant LOW 189T>C Ala63Ala
M0049831 EOCGPMIC_00005 2847 3 Skin 0.13 protein_coding synonymous_variant LOW 225G>A Val75Val
M0049832 EOCGPMIC_00005 2886 5 Skin 0.21 protein_coding synonymous_variant LOW 264T>C Ile88Ile
M0049833 EOCGPMIC_00005 3111 6 Skin 0.25 protein_coding synonymous_variant LOW 489T>C Ala163Ala
M0049834 EOCGPMIC_00005 3204 3 Skin 0.13 protein_coding synonymous_variant LOW 582C>T Ala194Ala
M0049835 EOCGPMIC_00006 3365 3 Skin 0.13 protein_coding synonymous_variant LOW 6C>G Leu2Leu
M0049836 EOCGPMIC_00006 3478 6 Skin 0.25 protein_coding missense_variant MODERATE 119T>C Leu40Pro
M0049837 EOCGPMIC_00006 3489 6 Skin 0.25 protein_coding missense_variant MODERATE 130T>G Tyr44Asp
M0049838 EOCGPMIC_00006 3575 5 Skin 0.21 protein_coding synonymous_variant LOW 216G>C Ala72Ala
M0049839 EOCGPMIC_00006 3614 4 Skin 0.17 protein_coding synonymous_variant LOW 255T>C Arg85Arg
M0049840 EOCGPMIC_00006 3652 5 Skin 0.21 protein_coding missense_variant MODERATE 293G>A Gly98Glu
M0049841 EOCGPMIC_00006 3763 6 Skin 0.25 protein_coding missense_variant MODERATE 404A>G His135Arg
M0049842 EOCGPMIC_00006 3771 5 Skin 0.21 protein_coding missense_variant MODERATE 412C>G Gln138Glu
M0049843 EOCGPMIC_00007 4397 4 Skin 0.17 protein_coding synonymous_variant LOW 492A>G Gln164Gln
M0049844 EOCGPMIC_00007 4829 4 Skin 0.17 protein_coding synonymous_variant LOW 60C>G Pro20Pro
M0049845 EOCGPMIC_00002 4902 6 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -3207A>G None
M0049846 EOCGPMIC_00002 4936 6 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -3241G>C None
M0049847 EOCGPMIC_00002 4967 6 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -3272C>G None
M0049848 EOCGPMIC_00008 5086 4 Skin 0.17 protein_coding synonymous_variant LOW 921A>G Ala307Ala
M0049849 EOCGPMIC_00008 5124 3 Skin 0.13 protein_coding synonymous_variant LOW 883A>C Arg295Arg
M0049850 EOCGPMIC_00008 5125 3 Skin 0.13 protein_coding synonymous_variant LOW 882T>G Ala294Ala
M0049851 EOCGPMIC_00002 6024 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4329A>C None
M0049852 EOCGPMIC_00002 6025 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4330A>C None
M0049853 EOCGPMIC_00002 6056 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4361T>C None
M0049854 EOCGPMIC_00009 6200 5 Skin 0.21 protein_coding missense_variant MODERATE 1634G>A Arg545His
M0049855 EOCGPMIC_00009 6208 5 Skin 0.21 protein_coding synonymous_variant LOW 1626A>G Arg542Arg
M0049856 EOCGPMIC_00009 6290 3 Skin 0.13 protein_coding missense_variant MODERATE 1544A>G Glu515Gly
M0049857 EOCGPMIC_00009 6655 3 Skin 0.13 protein_coding synonymous_variant LOW 1179C>G Ser393Ser
M0049858 EOCGPMIC_00009 6688 3 Skin 0.13 protein_coding synonymous_variant LOW 1146T>C Asp382Asp
M0049859 EOCGPMIC_00009 6706 4 Skin 0.17 protein_coding synonymous_variant LOW 1128G>C Ala376Ala
M0049860 EOCGPMIC_00009 6718 4 Skin 0.17 protein_coding synonymous_variant LOW 1116C>G Thr372Thr
M0049861 EOCGPMIC_00009 6739 3 Skin 0.13 protein_coding synonymous_variant LOW 1095G>C Pro365Pro
M0049862 EOCGPMIC_00009 6826 3 Skin 0.13 protein_coding synonymous_variant LOW 1008C>G Gly336Gly
M0049863 EOCGPMIC_00009 7021 4 Skin 0.17 protein_coding synonymous_variant LOW 813A>G Pro271Pro
M0049864 EOCGPMIC_00009 7084 3 Skin 0.13 protein_coding synonymous_variant LOW 750G>A Gln250Gln
M0049865 EOCGPMIC_00009 7141 4 Skin 0.17 protein_coding synonymous_variant LOW 693A>G Ala231Ala
M0049866 EOCGPMIC_00009 7399 3 Skin 0.13 protein_coding synonymous_variant LOW 435T>C Ile145Ile
M0049867 EOCGPMIC_00018 16189 7 Skin 0.29 protein_coding missense_variant MODERATE 959A>G Asn320Ser
M0049868 EOCGPMIC_00018 16359 3 Skin 0.13 protein_coding synonymous_variant LOW 789T>C Gly263Gly
M0049869 EOCGPMIC_00018 16362 3 Skin 0.13 protein_coding synonymous_variant LOW 786A>C Pro262Pro
M0049870 EOCGPMIC_00018 16454 8 Skin 0.33 protein_coding missense_variant MODERATE 694A>G Ile232Val
M0049871 EOCGPMIC_00018 16476 7 Skin 0.29 protein_coding missense_variant MODERATE 672A>C Gln224His
M0049872 EOCGPMIC_00018 16491 5 Skin 0.21 protein_coding synonymous_variant LOW 657G>C Leu219Leu
M0049873 EOCGPMIC_00018 16496 5 Skin 0.21 protein_coding missense_variant MODERATE 652C>T His218Tyr
M0049874 EOCGPMIC_00018 16497 5 Skin 0.21 protein_coding synonymous_variant LOW 651G>T Leu217Leu
M0049875 EOCGPMIC_00019 17364 9 Skin 0.38 protein_coding synonymous_variant LOW 921A>G Glu307Glu
M0049876 EOCGPMIC_00019 17443 9 Skin 0.38 protein_coding missense_variant MODERATE 842C>A Ala281Asp
M0049877 EOCGPMIC_00019 17493 10 Skin 0.42 protein_coding synonymous_variant LOW 792C>G Ala264Ala
M0049878 EOCGPMIC_00021 19186 7 Skin 0.29 protein_coding missense_variant MODERATE 22A>G Thr8Ala
M0049879 EOCGPMIC_00021 19324 9 Skin 0.38 protein_coding missense_variant MODERATE 160T>G Tyr54Asp
M0049880 EOCGPMIC_00021 19361 6 Skin 0.25 protein_coding missense_variant MODERATE 197C>T Ala66Val
M0049881 EOCGPMIC_00021 19384 8 Skin 0.33 protein_coding missense_variant MODERATE 220G>T Val74Leu
M0049882 EOCGPMIC_00021 19386 6 Skin 0.25 protein_coding synonymous_variant LOW 222G>A Val74Val
M0049883 EOCGPMIC_00021 19395 8 Skin 0.33 protein_coding synonymous_variant LOW 231G>T Gly77Gly
M0049884 EOCGPMIC_00021 19419 7 Skin 0.29 protein_coding synonymous_variant LOW 255C>T Thr85Thr
M0049885 EOCGPMIC_00021 19747 8 Skin 0.33 protein_coding missense_variant MODERATE 583C>G His195Asp
M0049886 EOCGPMIC_00021 19768 6 Skin 0.25 protein_coding synonymous_variant LOW 604C>T Leu202Leu
M0049887 EOCGPMIC_00021 19850 9 Skin 0.38 protein_coding missense_variant MODERATE 686A>G His229Arg
M0049888 EOCGPMIC_00021 19879 7 Skin 0.29 protein_coding missense_variant MODERATE 715A>C Met239Leu
M0049889 EOCGPMIC_00021 19894 7 Skin 0.29 protein_coding missense_variant MODERATE 730G>A Val244Met
M0049890 EOCGPMIC_00021 19947 4 Skin 0.17 protein_coding synonymous_variant LOW 783C>T Phe261Phe
M0049891 EOCGPMIC_00021 19968 6 Skin 0.25 protein_coding synonymous_variant LOW 804T>C Asn268Asn
M0049892 EOCGPMIC_00015 13650 7 Skin 0.29 protein_coding missense_variant MODERATE 1541T>A Phe514Tyr
M0049893 EOCGPMIC_00016 13961 7 Skin 0.29 protein_coding synonymous_variant LOW 12T>C Asp4Asp
M0049894 EOCGPMIC_00016 14675 6 Skin 0.25 protein_coding synonymous_variant LOW 726A>G Gly242Gly
M0049895 EOCGPMIC_00016 14740 7 Skin 0.29 protein_coding missense_variant MODERATE 791T>C Val264Ala
M0049896 EOCGPMIC_00016 15078 6 Skin 0.25 protein_coding missense_variant MODERATE 1129C>G Arg377Gly
M0049897 EOCGPMIC_00016 15149 5 Skin 0.21 protein_coding synonymous_variant LOW 1200G>A Pro400Pro
M0049898 EOCGPMIC_00017 15250 6 Skin 0.25 protein_coding synonymous_variant LOW 84A>G Glu28Glu
M0049899 EOCGPMIC_00017 15384 6 Skin 0.25 protein_coding missense_variant MODERATE 218T>C Leu73Ser
M0049900 EOCGPMIC_00017 15548 7 Skin 0.29 protein_coding missense_variant MODERATE 382A>G Met128Val
M0049901 EOCGPMIC_00017 15550 3 Skin 0.13 protein_coding missense_variant MODERATE 384G>A Met128Ile
M0049902 EOCGPMIC_00018 15575 7 Skin 0.29 protein_coding missense_variant MODERATE 1573A>G Met525Val
M0049903 EOCGPMIC_00018 15585 7 Skin 0.29 protein_coding synonymous_variant LOW 1563C>G Ser521Ser
M0049904 EOCGPMIC_00018 15711 4 Skin 0.17 protein_coding synonymous_variant LOW 1437C>G Ala479Ala
M0049905 EOCGPMIC_00018 16629 5 Skin 0.21 protein_coding synonymous_variant LOW 519G>A Glu173Glu
M0049906 EOCGPMIC_00018 16836 4 Skin 0.17 protein_coding synonymous_variant LOW 312T>C Gly104Gly
M0049907 EOCGPMIC_00018 16896 8 Skin 0.33 protein_coding synonymous_variant LOW 252A>G Val84Val
M0049908 EOCGPMIC_00018 16927 6 Skin 0.25 protein_coding missense_variant MODERATE 221T>A Phe74Tyr
M0049909 EOCGPMIC_00018 16928 3 Skin 0.13 protein_coding missense_variant MODERATE 220T>C Phe74Leu
M0049910 EOCGPMIC_00018 17023 5 Skin 0.21 protein_coding missense_variant MODERATE 125C>G Ala42Gly
M0049911 EOCGPMIC_00018 17049 4 Skin 0.17 protein_coding synonymous_variant LOW 99C>T Ala33Ala
M0049912 EOCGPMIC_00018 17050 4 Skin 0.17 protein_coding missense_variant MODERATE 98C>A Ala33Asp
M0049913 EOCGPMIC_00018 17051 7 Skin 0.29 protein_coding missense_variant MODERATE 97G>A Ala33Thr
M0049914 EOCGPMIC_00018 17059 7 Skin 0.29 protein_coding missense_variant MODERATE 89G>A Gly30Asp
M0049915 EOCGPMIC_00018 17067 7 Skin 0.29 protein_coding synonymous_variant LOW 81T>C Asp27Asp
M0049916 EOCGPMIC_00018 17082 6 Skin 0.25 protein_coding synonymous_variant LOW 66T>C Gly22Gly
M0049917 EOCGPMIC_00018 17121 8 Skin 0.33 protein_coding synonymous_variant LOW 27T>G Leu9Leu
M0049918 EOCGPMIC_00018 17160 7 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -13T>C None
M0049919 EOCGPMIC_00018 17178 7 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -31C>G None
M0049920 EOCGPMIC_00018 17179 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -32C>T None
M0049921 EOCGPMIC_00018 17191 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -44G>T None
M0049922 EOCGPMIC_00019 17303 8 Skin 0.33 protein_coding missense_variant MODERATE 982A>G Ile328Val
M0049923 EOCGPMIC_00019 17310 9 Skin 0.38 protein_coding synonymous_variant LOW 975T>C Asp325Asp
M0049924 EOCGPMIC_00021 19455 9 Skin 0.38 protein_coding synonymous_variant LOW 291G>C Gly97Gly
M0049925 EOCGPMIC_00021 19470 9 Skin 0.38 protein_coding synonymous_variant LOW 306G>T Ala102Ala
M0049926 EOCGPMIC_00021 19476 9 Skin 0.38 protein_coding synonymous_variant LOW 312G>C Val104Val
M0049927 EOCGPMIC_00021 19513 7 Skin 0.29 protein_coding missense_variant MODERATE 349G>A Ala117Thr
M0049928 EOCGPMIC_00021 19550 9 Skin 0.38 protein_coding missense_variant MODERATE 386G>A Gly129Asp
M0049929 EOCGPMIC_00021 19566 9 Skin 0.38 protein_coding synonymous_variant LOW 402A>G Ser134Ser
M0049930 EOCGPMIC_00021 20439 6 Skin 0.25 protein_coding synonymous_variant LOW 1275G>C Ala425Ala
M0049931 EOCGPMIC_00021 20610 6 Skin 0.25 protein_coding synonymous_variant LOW 1446T>G Thr482Thr
M0049932 EOCGPMIC_00021 20629 3 Skin 0.13 protein_coding missense_variant MODERATE 1465G>T Ala489Ser
M0049933 EOCGPMIC_00021 20666 3 Skin 0.13 protein_coding missense_variant MODERATE 1502A>G Glu501Gly
M0049934 EOCGPMIC_00021 20669 3 Skin 0.13 protein_coding missense_variant MODERATE 1505G>A Arg502His
M0049935 EOCGPMIC_00021 20673 3 Skin 0.13 protein_coding splice_region_variant&stop_retained_variant LOW 1509G>A Ter503Ter
M0049936 EOCGPMIC_00018 20706 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3559C>A None
M0049937 EOCGPMIC_00018 20712 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -3565C>T None
M0049938 EOCGPMIC_00018 20730 6 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -3583A>G None
M0049939 EOCGPMIC_00022 20924 4 Skin 0.17 protein_coding missense_variant MODERATE 698T>A Leu233Gln
M0049940 EOCGPMIC_00022 20962 4 Skin 0.17 protein_coding synonymous_variant LOW 660A>G Ala220Ala
M0049941 EOCGPMIC_00022 21517 3 Skin 0.13 protein_coding synonymous_variant LOW 105A>C Gly35Gly
M0049942 EOCGPMIC_00022 21596 4 Skin 0.17 protein_coding missense_variant MODERATE 26A>T Gln9Leu
M0049943 EOCGPMIC_00023 22025 3 Skin 0.13 protein_coding missense_variant MODERATE 212T>A Phe71Tyr
M0049944 EOCGPMIC_00023 22033 3 Skin 0.13 protein_coding synonymous_variant LOW 204A>G Glu68Glu
M0049945 EOCGPMIC_00023 22066 3 Skin 0.13 protein_coding synonymous_variant LOW 171A>G Val57Val
M0049946 EOCGPMIC_00023 22118 3 Skin 0.13 protein_coding missense_variant MODERATE 119T>A Ile40Asn
M0049947 EOCGPMIC_00018 15837 4 Skin 0.17 protein_coding synonymous_variant LOW 1311C>T Asp437Asp
M0049948 EOCGPMIC_00018 15843 4 Skin 0.17 protein_coding synonymous_variant LOW 1305A>C Arg435Arg
M0049949 EOCGPMIC_00018 15844 4 Skin 0.17 protein_coding missense_variant MODERATE 1304G>A Arg435Gln
M0049950 EOCGPMIC_00018 15858 4 Skin 0.17 protein_coding synonymous_variant LOW 1290T>C Asp430Asp
M0049951 EOCGPMIC_00019 17379 4 Skin 0.17 protein_coding synonymous_variant LOW 906C>G Ala302Ala
M0049952 EOCGPMIC_00019 17754 5 Skin 0.21 protein_coding synonymous_variant LOW 531G>A Glu177Glu
M0049953 EOCGPMIC_00019 17793 5 Skin 0.21 protein_coding synonymous_variant LOW 492T>C Val164Val
M0049954 EOCGPMIC_00019 17794 5 Skin 0.21 protein_coding missense_variant MODERATE 491T>C Val164Ala
M0049955 EOCGPMIC_00019 17895 5 Skin 0.21 protein_coding synonymous_variant LOW 390T>C Ala130Ala
M0049956 EOCGPMIC_00019 17987 6 Skin 0.25 protein_coding synonymous_variant LOW 298T>C Leu100Leu
M0049957 EOCGPMIC_00019 17991 6 Skin 0.25 protein_coding synonymous_variant LOW 294C>G Arg98Arg
M0049958 EOCGPMIC_00019 18087 5 Skin 0.21 protein_coding synonymous_variant LOW 198C>G Ala66Ala
M0049959 EOCGPMIC_00019 18171 6 Skin 0.25 protein_coding synonymous_variant LOW 114G>A Glu38Glu
M0049960 EOCGPMIC_00019 18216 5 Skin 0.21 protein_coding synonymous_variant LOW 69A>G Leu23Leu
M0049961 EOCGPMIC_00020 18466 4 Skin 0.17 protein_coding synonymous_variant LOW 318T>C Leu106Leu
M0049962 EOCGPMIC_00020 18499 4 Skin 0.17 protein_coding synonymous_variant LOW 285C>G Val95Val
M0049963 EOCGPMIC_00020 18613 4 Skin 0.17 protein_coding synonymous_variant LOW 171T>G Gly57Gly
M0049964 EOCGPMIC_00020 18661 4 Skin 0.17 protein_coding synonymous_variant LOW 123A>G Ala41Ala
M0049965 EOCGPMIC_00018 18905 5 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -1758C>G None
M0049966 EOCGPMIC_00018 18941 7 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -1794C>T None
M0049967 EOCGPMIC_00014 11174 4 Skin 0.17 protein_coding synonymous_variant LOW 213T>C Ala71Ala
M0049968 EOCGPMIC_00014 11204 3 Skin 0.13 protein_coding synonymous_variant LOW 243A>G Leu81Leu
M0049969 EOCGPMIC_00014 11240 3 Skin 0.13 protein_coding synonymous_variant LOW 279A>G Gly93Gly
M0049970 EOCGPMIC_00014 11271 3 Skin 0.13 protein_coding missense_variant MODERATE 310G>C Val104Leu
M0049971 EOCGPMIC_00014 11280 3 Skin 0.13 protein_coding missense_variant MODERATE 319C>T Leu107Phe
M0049972 EOCGPMIC_00014 11312 3 Skin 0.13 protein_coding synonymous_variant LOW 351T>C Val117Val
M0049973 EOCGPMIC_00014 11357 4 Skin 0.17 protein_coding synonymous_variant LOW 396A>G Leu132Leu
M0049974 EOCGPMIC_00014 11579 3 Skin 0.13 protein_coding synonymous_variant LOW 618A>G Val206Val
M0049975 EOCGPMIC_00015 12428 4 Skin 0.17 protein_coding missense_variant MODERATE 319A>G Thr107Ala
M0049976 EOCGPMIC_00015 12580 3 Skin 0.13 protein_coding synonymous_variant LOW 471C>G Val157Val
M0049977 EOCGPMIC_00015 12760 3 Skin 0.13 protein_coding synonymous_variant LOW 651A>C Leu217Leu
M0049978 EOCGPMIC_00015 13041 3 Skin 0.13 protein_coding missense_variant MODERATE 932G>A Arg311Lys
M0049979 EOCGPMIC_00015 13160 6 Skin 0.25 protein_coding missense_variant MODERATE 1051C>A Gln351Lys
M0049980 EOCGPMIC_00015 13163 6 Skin 0.25 protein_coding synonymous_variant LOW 1054T>C Leu352Leu
M0049981 EOCGPMIC_00015 13351 3 Skin 0.13 protein_coding synonymous_variant LOW 1242A>G Ala414Ala
M0049982 EOCGPMIC_00015 13513 4 Skin 0.17 protein_coding synonymous_variant LOW 1404T>C Thr468Thr
M0049983 EOCGPMIC_00016 14034 3 Skin 0.13 protein_coding missense_variant MODERATE 85A>G Thr29Ala
M0049984 EOCGPMIC_00016 14150 3 Skin 0.13 protein_coding synonymous_variant LOW 201G>C Thr67Thr
M0049985 EOCGPMIC_00018 15914 4 Skin 0.17 protein_coding missense_variant MODERATE 1234G>A Asp412Asn
M0049986 EOCGPMIC_00018 15924 4 Skin 0.17 protein_coding synonymous_variant LOW 1224C>T Gly408Gly
M0049987 EOCGPMIC_00018 15973 3 Skin 0.13 protein_coding missense_variant MODERATE 1175A>G Asn392Ser
M0049988 EOCGPMIC_00018 15974 3 Skin 0.13 protein_coding missense_variant MODERATE 1174A>G Asn392Asp
M0049989 EOCGPMIC_00018 15978 3 Skin 0.13 protein_coding synonymous_variant LOW 1170C>T Asp390Asp
M0049990 EOCGPMIC_00018 15986 3 Skin 0.13 protein_coding missense_variant MODERATE 1162C>T Arg388Trp
M0049991 EOCGPMIC_00018 15994 3 Skin 0.13 protein_coding missense_variant MODERATE 1154T>C Val385Ala
M0049992 EOCGPMIC_00018 15995 3 Skin 0.13 protein_coding missense_variant MODERATE 1153G>A Val385Ile
M0049993 EOCGPMIC_00018 16001 3 Skin 0.13 protein_coding missense_variant MODERATE 1147A>G Ile383Val
M0049994 EOCGPMIC_00018 16054 4 Skin 0.17 protein_coding missense_variant MODERATE 1094G>C Ser365Thr
M0049995 EOCGPMIC_00018 16116 3 Skin 0.13 protein_coding synonymous_variant LOW 1032G>C Ala344Ala
M0049996 EOCGPMIC_00018 16138 3 Skin 0.13 protein_coding missense_variant MODERATE 1010C>A Pro337His
M0049997 EOCGPMIC_00018 16150 3 Skin 0.13 protein_coding missense_variant MODERATE 998G>A Arg333His
M0049998 EOCGPMIC_00018 16157 3 Skin 0.13 protein_coding missense_variant MODERATE 991A>G Ser331Gly
M0049999 EOCGPMIC_00018 16169 3 Skin 0.13 protein_coding missense_variant MODERATE 979A>G Thr327Ala
M0050000 EOCGPMIC_00018 16210 3 Skin 0.13 protein_coding missense_variant MODERATE 938A>G His313Arg
M0050001 EOCGPMIC_00018 16245 3 Skin 0.13 protein_coding synonymous_variant LOW 903C>T Gly301Gly
M0050002 EOCGPMIC_00018 16278 3 Skin 0.13 protein_coding synonymous_variant LOW 870C>T Tyr290Tyr
M0050003 EOCGPMIC_00018 16413 3 Skin 0.13 protein_coding synonymous_variant LOW 735G>C Ala245Ala
M0050004 EOCGPMIC_00018 16419 4 Skin 0.17 protein_coding synonymous_variant LOW 729T>C Gly243Gly
M0050005 EOCGPMIC_00018 16422 3 Skin 0.13 protein_coding synonymous_variant LOW 726G>A Gln242Gln
M0050006 EOCGPMIC_00018 16433 3 Skin 0.13 protein_coding missense_variant MODERATE 715G>T Ala239Ser
M0050007 EOCGPMIC_00018 16434 3 Skin 0.13 protein_coding missense_variant MODERATE 714C>A Asp238Glu
M0050008 EOCGPMIC_00018 16437 3 Skin 0.13 protein_coding synonymous_variant LOW 711T>C Ala237Ala
M0050009 EOCGPMIC_00018 16440 4 Skin 0.17 protein_coding synonymous_variant LOW 708T>C Thr236Thr
M0050010 EOCGPMIC_00018 16478 3 Skin 0.13 protein_coding missense_variant MODERATE 670C>A Gln224Lys
M0050011 EOCGPMIC_00018 16483 3 Skin 0.13 protein_coding missense_variant MODERATE 665C>T Pro222Leu
M0050012 EOCGPMIC_00020 18406 3 Skin 0.13 protein_coding synonymous_variant LOW 378C>T Ala126Ala
M0050013 EOCGPMIC_00020 18517 3 Skin 0.13 protein_coding synonymous_variant LOW 267G>C Pro89Pro
M0050014 EOCGPMIC_00021 19450 3 Skin 0.13 protein_coding missense_variant MODERATE 286G>T Val96Phe
M0050015 EOCGPMIC_00021 19619 3 Skin 0.13 protein_coding missense_variant MODERATE 455A>C Asn152Thr
M0050016 EOCGPMIC_00022 21181 3 Skin 0.13 protein_coding synonymous_variant LOW 441T>C Ala147Ala
M0050017 EOCGPMIC_00023 21811 3 Skin 0.13 protein_coding synonymous_variant LOW 426C>T Tyr142Tyr
M0050018 EOCGPMIC_00019 17574 3 Skin 0.13 protein_coding synonymous_variant LOW 711C>T Ile237Ile
M0050019 EOCGPMIC_00019 17655 3 Skin 0.13 protein_coding missense_variant MODERATE 630C>G Asp210Glu
M0050020 EOCGPMIC_00019 18174 3 Skin 0.13 protein_coding synonymous_variant LOW 111T>C Tyr37Tyr
M0050021 EOCGPMIC_00020 18742 3 Skin 0.13 protein_coding synonymous_variant LOW 42C>T Ile14Ile
M0050022 EOCGPMIC_00020 18766 3 Skin 0.13 protein_coding synonymous_variant LOW 18G>T Gly6Gly
M0050023 EOCGPMIC_00015 13798 3 Skin 0.13 protein_coding synonymous_variant LOW 1689T>C Tyr563Tyr
M0050024 EOCGPMIC_00017 15373 3 Skin 0.13 protein_coding synonymous_variant LOW 207C>G Leu69Leu
M0050025 EOCGPMIC_00018 15888 3 Skin 0.13 protein_coding synonymous_variant LOW 1260G>C Gly420Gly
M0050026 EOCGPMIC_00017 15517 3 Skin 0.13 protein_coding synonymous_variant LOW 351G>A Pro117Pro
M0050027 EOCGPMIC_00017 15520 3 Skin 0.13 protein_coding synonymous_variant LOW 354C>T Pro118Pro
M0050028 EOCGPMIC_00017 15522 3 Skin 0.13 protein_coding missense_variant MODERATE 356C>A Ala119Glu
M0050029 EOCGPMIC_00017 15523 3 Skin 0.13 protein_coding synonymous_variant LOW 357G>A Ala119Ala
M0050030 EOCGPMIC_00018 16967 3 Skin 0.13 protein_coding missense_variant MODERATE 181G>C Asp61His
M0050031 EOCGPMIC_00019 17887 3 Skin 0.13 protein_coding missense_variant MODERATE 398C>T Ala133Val
M0050032 EOCGPMIC_00006 3848 3 Skin 0.13 protein_coding synonymous_variant LOW 489G>A Glu163Glu
M0050033 EOCGPMIC_00006 3855 3 Skin 0.13 protein_coding missense_variant MODERATE 496C>A His166Asn
M0050034 EOCGPMIC_00007 4739 3 Skin 0.13 protein_coding synonymous_variant LOW 150T>C Asp50Asp
M0050035 EOCGPMIC_00018 20710 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3563G>C None
M0050036 EOCGPMIC_00022 20754 3 Skin 0.13 protein_coding missense_variant MODERATE 868T>G Tyr290Asp
M0050037 EOCGPMIC_00022 20809 3 Skin 0.13 protein_coding synonymous_variant LOW 813T>C Pro271Pro






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term