Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2660
  Reference Plasmid   1111525849859186_bin.7__k141_345140
  Reference Plasmid Size   14953
  Reference Plasmid GC Content   0.44
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0051962 GGPDIJIF_00006 8688 11 Skin 0.38 protein_coding synonymous_variant LOW 1632A>G Glu544Glu
M0051963 GGPDIJIF_00006 8741 8 Skin 0.28 protein_coding missense_variant MODERATE 1685C>G Ala562Gly
M0051964 GGPDIJIF_00006 8742 4 Skin 0.14 protein_coding synonymous_variant LOW 1686T>C Ala562Ala
M0051965 GGPDIJIF_00007 8799 8 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -90C>A None
M0051966 GGPDIJIF_00007 8809 7 Skin 0.24 protein_coding upstream_gene_variant MODIFIER -80A>G None
M0051967 GGPDIJIF_00007 8815 7 Skin 0.24 protein_coding upstream_gene_variant MODIFIER -74G>A None
M0051968 GGPDIJIF_00007 9876 13 Skin 0.45 protein_coding missense_variant MODERATE 988A>C Thr330Pro
M0051969 GGPDIJIF_00007 10970 24 Skin 0.83 protein_coding synonymous_variant LOW 2082C>T Cys694Cys
M0051970 GGPDIJIF_00007 10974 23 Skin 0.79 protein_coding missense_variant MODERATE 2086G>A Asp696Asn
M0051971 GGPDIJIF_00008 11192 20 Skin 0.69 protein_coding missense_variant MODERATE 76G>A Gly26Ser
M0051972 GGPDIJIF_00008 11215 7 Skin 0.24 protein_coding synonymous_variant LOW 99G>A Ala33Ala
M0051973 GGPDIJIF_00008 11258 9 Skin 0.31 protein_coding missense_variant MODERATE 142A>C Lys48Gln
M0051974 GGPDIJIF_00008 11272 8 Skin 0.28 protein_coding synonymous_variant LOW 156G>A Leu52Leu
M0051975 GGPDIJIF_00008 11281 7 Skin 0.24 protein_coding synonymous_variant LOW 165C>T Ile55Ile
M0051976 GGPDIJIF_00008 11292 10 Skin 0.34 protein_coding missense_variant MODERATE 176C>G Ala59Gly
M0051977 GGPDIJIF_00008 11299 8 Skin 0.28 protein_coding synonymous_variant LOW 183G>C Leu61Leu
M0051978 GGPDIJIF_00008 11315 8 Skin 0.28 protein_coding missense_variant MODERATE 199A>G Thr67Ala
M0051979 GGPDIJIF_00008 11329 8 Skin 0.28 protein_coding synonymous_variant LOW 213A>G Pro71Pro
M0051980 GGPDIJIF_00008 11358 6 Skin 0.21 protein_coding missense_variant MODERATE 242G>A Ser81Asn
M0051981 GGPDIJIF_00008 11386 7 Skin 0.24 protein_coding synonymous_variant LOW 270C>T Phe90Phe
M0051982 GGPDIJIF_00008 11470 10 Skin 0.34 protein_coding synonymous_variant LOW 354C>T Cys118Cys
M0051983 GGPDIJIF_00008 11490 7 Skin 0.24 protein_coding missense_variant MODERATE 374T>C Val125Ala
M0051984 GGPDIJIF_00008 11491 7 Skin 0.24 protein_coding synonymous_variant LOW 375T>C Val125Val
M0051985 GGPDIJIF_00008 11524 11 Skin 0.38 protein_coding synonymous_variant LOW 408A>C Thr136Thr
M0051986 GGPDIJIF_00008 11545 12 Skin 0.41 protein_coding synonymous_variant LOW 429G>A Leu143Leu
M0051987 GGPDIJIF_00008 11566 12 Skin 0.41 protein_coding synonymous_variant LOW 450A>G Leu150Leu
M0051988 GGPDIJIF_00008 11590 5 Skin 0.17 protein_coding synonymous_variant LOW 474C>T Thr158Thr
M0051989 GGPDIJIF_00008 11602 9 Skin 0.31 protein_coding synonymous_variant LOW 486G>A Lys162Lys
M0051990 GGPDIJIF_00008 11638 8 Skin 0.28 protein_coding synonymous_variant LOW 522A>G Lys174Lys
M0051991 GGPDIJIF_00008 11650 7 Skin 0.24 protein_coding synonymous_variant LOW 534T>C Thr178Thr
M0051992 GGPDIJIF_00008 11654 7 Skin 0.24 protein_coding missense_variant MODERATE 538G>A Asp180Asn
M0051993 GGPDIJIF_00008 11665 6 Skin 0.21 protein_coding synonymous_variant LOW 549T>C Gly183Gly
M0051994 GGPDIJIF_00008 11669 5 Skin 0.17 protein_coding missense_variant MODERATE 553A>G Thr185Ala
M0051995 GGPDIJIF_00008 11680 5 Skin 0.17 protein_coding synonymous_variant LOW 564T>G Leu188Leu
M0051996 GGPDIJIF_00008 11695 14 Skin 0.48 protein_coding synonymous_variant LOW 579T>C Ile193Ile
M0051997 GGPDIJIF_00008 11760 8 Skin 0.28 protein_coding missense_variant MODERATE 644T>C Ile215Thr
M0051998 GGPDIJIF_00008 11768 10 Skin 0.34 protein_coding missense_variant MODERATE 652A>G Ile218Val
M0051999 GGPDIJIF_00008 11892 6 Skin 0.21 protein_coding missense_variant MODERATE 776A>G Gln259Arg
M0052000 GGPDIJIF_00008 11904 6 Skin 0.21 protein_coding missense_variant MODERATE 788C>G Thr263Ser
M0052001 GGPDIJIF_00008 11916 7 Skin 0.24 protein_coding missense_variant MODERATE 800C>A Thr267Lys
M0052002 GGPDIJIF_00008 11920 8 Skin 0.28 protein_coding synonymous_variant LOW 804A>G Pro268Pro
M0052003 GGPDIJIF_00008 11927 8 Skin 0.28 protein_coding missense_variant MODERATE 811G>A Val271Ile
M0052004 GGPDIJIF_00008 11932 7 Skin 0.24 protein_coding synonymous_variant LOW 816T>G Leu272Leu
M0052005 GGPDIJIF_00008 11933 8 Skin 0.28 protein_coding missense_variant MODERATE 817G>A Ala273Thr
M0052006 GGPDIJIF_00008 11988 6 Skin 0.21 protein_coding missense_variant MODERATE 872A>C Tyr291Ser
M0052007 GGPDIJIF_00008 12020 4 Skin 0.14 protein_coding missense_variant MODERATE 904G>A Asp302Asn
M0052008 GGPDIJIF_00008 12029 4 Skin 0.14 protein_coding synonymous_variant LOW 913C>T Leu305Leu
M0052009 GGPDIJIF_00008 12039 7 Skin 0.24 protein_coding missense_variant MODERATE 923A>C Lys308Thr
M0052010 GGPDIJIF_00008 12109 6 Skin 0.21 protein_coding synonymous_variant LOW 993T>G Gly331Gly
M0052011 GGPDIJIF_00008 12127 7 Skin 0.24 protein_coding synonymous_variant LOW 1011A>G Thr337Thr
M0052012 GGPDIJIF_00008 12141 5 Skin 0.17 protein_coding missense_variant MODERATE 1025T>C Leu342Ser
M0052013 GGPDIJIF_00008 12143 8 Skin 0.28 protein_coding synonymous_variant LOW 1027T>C Leu343Leu
M0052014 GGPDIJIF_00008 12167 4 Skin 0.14 protein_coding missense_variant MODERATE 1051A>G Ser351Gly
M0052015 GGPDIJIF_00008 12172 5 Skin 0.17 protein_coding synonymous_variant LOW 1056C>G Arg352Arg
M0052016 GGPDIJIF_00008 12185 4 Skin 0.14 protein_coding synonymous_variant LOW 1069C>T Leu357Leu
M0052017 GGPDIJIF_00009 12216 4 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -203C>T None
M0052018 GGPDIJIF_00009 12256 4 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -163G>C None
M0052019 GGPDIJIF_00009 12332 5 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -87T>G None
M0052020 GGPDIJIF_00009 12333 5 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -86T>C None
M0052021 GGPDIJIF_00009 12370 4 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -49T>C None
M0052022 GGPDIJIF_00009 12393 6 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -26G>A None
M0052023 GGPDIJIF_00009 12449 4 Skin 0.14 protein_coding missense_variant MODERATE 31C>A His11Asn
M0052024 GGPDIJIF_00009 12562 4 Skin 0.14 protein_coding missense_variant MODERATE 144T>A Asp48Glu
M0052025 GGPDIJIF_00009 12691 4 Skin 0.14 protein_coding missense_variant MODERATE 273T>G Phe91Leu
M0052026 GGPDIJIF_00009 13093 4 Skin 0.14 protein_coding synonymous_variant LOW 675A>C Pro225Pro
M0052027 GGPDIJIF_00009 13102 4 Skin 0.14 protein_coding synonymous_variant LOW 684G>A Lys228Lys
M0052028 GGPDIJIF_00009 13105 4 Skin 0.14 protein_coding synonymous_variant LOW 687G>A Thr229Thr
M0052029 GGPDIJIF_00009 13138 4 Skin 0.14 protein_coding synonymous_variant LOW 720A>C Gly240Gly
M0052030 GGPDIJIF_00009 13186 5 Skin 0.17 protein_coding synonymous_variant LOW 768T>C Gly256Gly
M0052031 GGPDIJIF_00009 13199 4 Skin 0.14 protein_coding missense_variant MODERATE 781G>A Ala261Thr
M0052032 GGPDIJIF_00009 13207 5 Skin 0.17 protein_coding synonymous_variant LOW 789A>G Ala263Ala
M0052033 GGPDIJIF_00009 13228 4 Skin 0.14 protein_coding synonymous_variant LOW 810C>T Tyr270Tyr
M0052034 GGPDIJIF_00009 13245 5 Skin 0.17 protein_coding missense_variant MODERATE 827C>A Thr276Lys
M0052035 GGPDIJIF_00009 13246 5 Skin 0.17 protein_coding synonymous_variant LOW 828G>T Thr276Thr
M0052036 GGPDIJIF_00009 13276 5 Skin 0.17 protein_coding synonymous_variant LOW 858A>G Ser286Ser
M0052037 GGPDIJIF_00009 13294 4 Skin 0.14 protein_coding synonymous_variant LOW 876C>T Thr292Thr
M0052038 GGPDIJIF_00009 13312 4 Skin 0.14 protein_coding synonymous_variant LOW 894G>A Thr298Thr
M0052039 GGPDIJIF_00009 13378 4 Skin 0.14 protein_coding synonymous_variant LOW 960A>G Thr320Thr
M0052040 GGPDIJIF_00009 13401 4 Skin 0.14 protein_coding missense_variant MODERATE 983A>G Asn328Ser
M0052041 GGPDIJIF_00009 13418 4 Skin 0.14 protein_coding synonymous_variant LOW 1000C>T Leu334Leu
M0052042 GGPDIJIF_00009 13423 5 Skin 0.17 protein_coding synonymous_variant LOW 1005T>C Asp335Asp
M0052043 GGPDIJIF_00009 13426 5 Skin 0.17 protein_coding missense_variant MODERATE 1008A>C Gln336His
M0052044 GGPDIJIF_00009 13729 4 Skin 0.14 protein_coding synonymous_variant LOW 1311T>G Gly437Gly
M0052045 GGPDIJIF_00009 13753 4 Skin 0.14 protein_coding synonymous_variant LOW 1335C>A Val445Val
M0052046 GGPDIJIF_00009 13817 5 Skin 0.17 protein_coding missense_variant MODERATE 1399G>A Val467Ile
M0052047 GGPDIJIF_00009 13831 4 Skin 0.14 protein_coding synonymous_variant LOW 1413A>G Ser471Ser
M0052048 GGPDIJIF_00009 13924 4 Skin 0.14 protein_coding synonymous_variant LOW 1506A>G Leu502Leu
M0052049 GGPDIJIF_00009 14029 4 Skin 0.14 protein_coding synonymous_variant LOW 1611T>A Leu537Leu
M0052050 GGPDIJIF_00009 14042 4 Skin 0.14 protein_coding missense_variant MODERATE 1624G>T Ala542Ser
M0052051 GGPDIJIF_00009 14059 4 Skin 0.14 protein_coding synonymous_variant LOW 1641T>C Phe547Phe
M0052052 GGPDIJIF_00009 14062 4 Skin 0.14 protein_coding synonymous_variant LOW 1644T>G Pro548Pro
M0052053 GGPDIJIF_00009 14090 5 Skin 0.17 protein_coding missense_variant MODERATE 1672G>C Ala558Pro
M0052054 GGPDIJIF_00009 14160 5 Skin 0.17 protein_coding missense_variant MODERATE 1742A>G Asp581Gly
M0052055 GGPDIJIF_00009 14176 4 Skin 0.14 protein_coding synonymous_variant LOW 1758C>T Asp586Asp
M0052056 GGPDIJIF_00009 14182 5 Skin 0.17 protein_coding synonymous_variant LOW 1764A>G Ala588Ala
M0052057 GGPDIJIF_00009 14266 5 Skin 0.17 protein_coding synonymous_variant LOW 1848A>C Ser616Ser
M0052058 GGPDIJIF_00009 14269 4 Skin 0.14 protein_coding synonymous_variant LOW 1851T>C Pro617Pro
M0052059 GGPDIJIF_00009 14287 4 Skin 0.14 protein_coding synonymous_variant LOW 1869C>G Val623Val
M0052060 GGPDIJIF_00009 14296 4 Skin 0.14 protein_coding synonymous_variant LOW 1878C>T Asn626Asn
M0052061 GGPDIJIF_00009 14323 4 Skin 0.14 protein_coding synonymous_variant LOW 1905A>T Ser635Ser
M0052062 GGPDIJIF_00009 14368 5 Skin 0.17 protein_coding synonymous_variant LOW 1950G>A Val650Val
M0052063 GGPDIJIF_00006 8151 21 Skin 0.72 protein_coding synonymous_variant LOW 1095T>C Phe365Phe
M0052064 GGPDIJIF_00006 8394 19 Skin 0.66 protein_coding synonymous_variant LOW 1338T>C Ile446Ile
M0052065 GGPDIJIF_00006 8415 14 Skin 0.48 protein_coding synonymous_variant LOW 1359C>T Val453Val
M0052066 GGPDIJIF_00006 8436 21 Skin 0.72 protein_coding synonymous_variant LOW 1380G>T Leu460Leu
M0052067 GGPDIJIF_00008 11806 6 Skin 0.21 protein_coding synonymous_variant LOW 690C>T Asp230Asp
M0052068 GGPDIJIF_00008 12084 4 Skin 0.14 protein_coding missense_variant MODERATE 968A>G His323Arg
M0052069 GGPDIJIF_00008 12086 4 Skin 0.14 protein_coding missense_variant MODERATE 970A>C Lys324Gln
M0052070 GGPDIJIF_00008 12133 3 Skin 0.10 protein_coding synonymous_variant LOW 1017A>G Lys339Lys
M0052071 GGPDIJIF_00006 6993 4 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -64G>A None
M0052072 GGPDIJIF_00006 7539 19 Skin 0.66 protein_coding synonymous_variant LOW 483C>G Leu161Leu
M0052073 GGPDIJIF_00006 7540 18 Skin 0.62 protein_coding missense_variant MODERATE 484T>C Phe162Leu
M0052074 GGPDIJIF_00007 10997 3 Skin 0.10 protein_coding synonymous_variant LOW 2109T>C Gly703Gly
M0052075 GGPDIJIF_00007 11027 4 Skin 0.14 protein_coding synonymous_variant LOW 2139A>C Thr713Thr
M0052076 GGPDIJIF_00008 11257 3 Skin 0.10 protein_coding synonymous_variant LOW 141A>G Leu47Leu
M0052077 GGPDIJIF_00008 12106 3 Skin 0.10 protein_coding synonymous_variant LOW 990T>C Gly330Gly
M0052078 GGPDIJIF_00009 12308 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -111G>C None
M0052079 GGPDIJIF_00006 7242 4 Skin 0.14 protein_coding synonymous_variant LOW 186A>G Leu62Leu
M0052080 GGPDIJIF_00006 7246 5 Skin 0.17 protein_coding missense_variant MODERATE 190G>A Val64Met
M0052081 GGPDIJIF_00006 7248 7 Skin 0.24 protein_coding synonymous_variant LOW 192G>A Val64Val
M0052082 GGPDIJIF_00006 7275 6 Skin 0.21 protein_coding synonymous_variant LOW 219A>G Leu73Leu
M0052083 GGPDIJIF_00006 7287 8 Skin 0.28 protein_coding missense_variant MODERATE 231G>T Leu77Phe
M0052084 GGPDIJIF_00006 7308 8 Skin 0.28 protein_coding synonymous_variant LOW 252T>C Thr84Thr
M0052085 GGPDIJIF_00006 7309 7 Skin 0.24 protein_coding missense_variant MODERATE 253A>C Lys85Gln
M0052086 GGPDIJIF_00006 7389 5 Skin 0.17 protein_coding synonymous_variant LOW 333A>G Glu111Glu
M0052087 GGPDIJIF_00006 7462 7 Skin 0.24 protein_coding synonymous_variant LOW 406T>C Leu136Leu
M0052088 GGPDIJIF_00006 7527 4 Skin 0.14 protein_coding synonymous_variant LOW 471T>C Ser157Ser
M0052089 GGPDIJIF_00006 7528 4 Skin 0.14 protein_coding missense_variant MODERATE 472C>G Leu158Val
M0052090 GGPDIJIF_00006 7554 11 Skin 0.38 protein_coding synonymous_variant LOW 498A>G Gly166Gly
M0052091 GGPDIJIF_00006 7594 3 Skin 0.10 protein_coding missense_variant MODERATE 538G>A Gly180Ser
M0052092 GGPDIJIF_00006 7602 3 Skin 0.10 protein_coding synonymous_variant LOW 546G>A Val182Val
M0052093 GGPDIJIF_00006 7697 3 Skin 0.10 protein_coding missense_variant MODERATE 641G>A Arg214His
M0052094 GGPDIJIF_00006 7723 6 Skin 0.21 protein_coding missense_variant MODERATE 667C>A His223Asn
M0052095 GGPDIJIF_00006 7728 5 Skin 0.17 protein_coding missense_variant MODERATE 672T>G Asp224Glu
M0052096 GGPDIJIF_00006 7851 7 Skin 0.24 protein_coding synonymous_variant LOW 795A>C Ala265Ala
M0052097 GGPDIJIF_00007 8981 4 Skin 0.14 protein_coding synonymous_variant LOW 93A>G Ala31Ala
M0052098 GGPDIJIF_00007 8982 5 Skin 0.17 protein_coding missense_variant MODERATE 94G>A Ala32Thr
M0052099 GGPDIJIF_00007 8996 4 Skin 0.14 protein_coding missense_variant MODERATE 108A>T Glu36Asp
M0052100 GGPDIJIF_00005 6796 5 Skin 0.17 protein_coding synonymous_variant LOW 2082C>T Leu694Leu
M0052101 GGPDIJIF_00005 6883 4 Skin 0.14 protein_coding synonymous_variant LOW 2169G>C Thr723Thr
M0052102 GGPDIJIF_00006 7027 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -30C>A None
M0052103 GGPDIJIF_00006 7065 5 Skin 0.17 protein_coding synonymous_variant LOW 9C>T Pro3Pro
M0052104 GGPDIJIF_00006 7089 3 Skin 0.10 protein_coding synonymous_variant LOW 33T>C Leu11Leu
M0052105 GGPDIJIF_00006 7194 6 Skin 0.21 protein_coding synonymous_variant LOW 138T>C Ile46Ile
M0052106 GGPDIJIF_00006 7202 6 Skin 0.21 protein_coding missense_variant MODERATE 146C>T Ala49Val
M0052107 GGPDIJIF_00006 8181 6 Skin 0.21 protein_coding synonymous_variant LOW 1125T>G Ser375Ser
M0052108 GGPDIJIF_00006 7338 4 Skin 0.14 protein_coding synonymous_variant LOW 282A>G Leu94Leu
M0052109 GGPDIJIF_00006 7416 3 Skin 0.10 protein_coding synonymous_variant LOW 360C>T Ala120Ala
M0052110 GGPDIJIF_00006 7590 3 Skin 0.10 protein_coding synonymous_variant LOW 534C>T Leu178Leu
M0052111 GGPDIJIF_00006 7593 4 Skin 0.14 protein_coding synonymous_variant LOW 537T>G Val179Val
M0052112 GGPDIJIF_00006 7710 6 Skin 0.21 protein_coding missense_variant MODERATE 654C>A Asn218Lys
M0052113 GGPDIJIF_00006 7713 3 Skin 0.10 protein_coding synonymous_variant LOW 657T>C Arg219Arg
M0052114 GGPDIJIF_00006 7758 6 Skin 0.21 protein_coding missense_variant MODERATE 702G>C Lys234Asn
M0052115 GGPDIJIF_00006 7908 5 Skin 0.17 protein_coding synonymous_variant LOW 852G>A Leu284Leu
M0052116 GGPDIJIF_00006 8017 3 Skin 0.10 protein_coding missense_variant MODERATE 961A>G Asn321Asp
M0052117 GGPDIJIF_00006 8028 7 Skin 0.24 protein_coding synonymous_variant LOW 972A>C Thr324Thr
M0052118 GGPDIJIF_00006 8233 3 Skin 0.10 protein_coding missense_variant MODERATE 1177A>G Thr393Ala
M0052119 GGPDIJIF_00006 8263 5 Skin 0.17 protein_coding missense_variant MODERATE 1207A>G Thr403Ala
M0052120 GGPDIJIF_00006 8277 4 Skin 0.14 protein_coding synonymous_variant LOW 1221T>C Tyr407Tyr
M0052121 GGPDIJIF_00006 8345 7 Skin 0.24 protein_coding missense_variant MODERATE 1289C>G Thr430Ser
M0052122 GGPDIJIF_00006 8490 3 Skin 0.10 protein_coding synonymous_variant LOW 1434T>G Ala478Ala
M0052123 GGPDIJIF_00006 8493 3 Skin 0.10 protein_coding synonymous_variant LOW 1437C>G Val479Val
M0052124 GGPDIJIF_00006 8526 5 Skin 0.17 protein_coding synonymous_variant LOW 1470G>A Glu490Glu
M0052125 GGPDIJIF_00006 8572 6 Skin 0.21 protein_coding missense_variant MODERATE 1516C>A His506Asn
M0052126 GGPDIJIF_00006 8573 6 Skin 0.21 protein_coding missense_variant MODERATE 1517A>C His506Pro
M0052127 GGPDIJIF_00006 8610 4 Skin 0.14 protein_coding synonymous_variant LOW 1554T>G Leu518Leu
M0052128 GGPDIJIF_00006 8619 4 Skin 0.14 protein_coding synonymous_variant LOW 1563T>C Ile521Ile
M0052129 GGPDIJIF_00006 8637 4 Skin 0.14 protein_coding synonymous_variant LOW 1581C>T Tyr527Tyr
M0052130 GGPDIJIF_00006 8649 4 Skin 0.14 protein_coding synonymous_variant LOW 1593A>G Ala531Ala
M0052131 GGPDIJIF_00007 8764 5 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -125A>C None
M0052132 GGPDIJIF_00007 8767 5 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -122T>C None
M0052133 GGPDIJIF_00007 8906 3 Skin 0.10 protein_coding synonymous_variant LOW 18G>A Leu6Leu
M0052134 GGPDIJIF_00007 8924 3 Skin 0.10 protein_coding synonymous_variant LOW 36G>T Ala12Ala
M0052135 GGPDIJIF_00007 8925 3 Skin 0.10 protein_coding missense_variant MODERATE 37T>A Ser13Thr
M0052136 GGPDIJIF_00007 8926 4 Skin 0.14 protein_coding missense_variant MODERATE 38C>G Ser13Cys
M0052137 GGPDIJIF_00007 8930 4 Skin 0.14 protein_coding synonymous_variant LOW 42A>G Leu14Leu
M0052138 GGPDIJIF_00007 8933 4 Skin 0.14 protein_coding synonymous_variant LOW 45A>G Ala15Ala
M0052139 GGPDIJIF_00007 8936 4 Skin 0.14 protein_coding synonymous_variant LOW 48A>G Val16Val
M0052140 GGPDIJIF_00007 8955 3 Skin 0.10 protein_coding missense_variant MODERATE 67G>A Ala23Thr
M0052141 GGPDIJIF_00006 8331 3 Skin 0.10 protein_coding missense_variant MODERATE 1275A>C Lys425Asn
M0052142 GGPDIJIF_00006 8349 4 Skin 0.14 protein_coding synonymous_variant LOW 1293G>A Ala431Ala
M0052143 GGPDIJIF_00006 8466 4 Skin 0.14 protein_coding synonymous_variant LOW 1410C>T Arg470Arg
M0052144 GGPDIJIF_00006 8515 4 Skin 0.14 protein_coding synonymous_variant LOW 1459T>C Leu487Leu
M0052145 GGPDIJIF_00009 14449 3 Skin 0.10 protein_coding synonymous_variant LOW 2031C>T Ser677Ser
M0052146 GGPDIJIF_00002 1579 3 Skin 0.10 protein_coding synonymous_variant LOW 756C>T Asn252Asn
M0052147 GGPDIJIF_00003 1704 3 Skin 0.10 protein_coding synonymous_variant LOW 108A>C Val36Val
M0052148 GGPDIJIF_00003 1734 3 Skin 0.10 protein_coding synonymous_variant LOW 138C>A Thr46Thr
M0052149 GGPDIJIF_00006 8691 3 Skin 0.10 protein_coding synonymous_variant LOW 1635G>T Leu545Leu
M0052150 GGPDIJIF_00007 8761 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -128T>C None
M0052151 GGPDIJIF_00007 8942 3 Skin 0.10 protein_coding synonymous_variant LOW 54C>T Ile18Ile
M0052152 GGPDIJIF_00006 7629 6 Skin 0.21 protein_coding synonymous_variant LOW 573A>G Glu191Glu
M0052153 GGPDIJIF_00006 8304 3 Skin 0.10 protein_coding synonymous_variant LOW 1248A>G Ala416Ala
M0052154 GGPDIJIF_00005 5441 4 Skin 0.14 protein_coding missense_variant MODERATE 727A>G Asn243Asp
M0052155 GGPDIJIF_00005 5488 4 Skin 0.14 protein_coding synonymous_variant LOW 774A>C Arg258Arg
M0052156 GGPDIJIF_00005 5494 4 Skin 0.14 protein_coding synonymous_variant LOW 780C>T Asp260Asp
M0052157 GGPDIJIF_00005 5521 4 Skin 0.14 protein_coding synonymous_variant LOW 807T>C Gly269Gly
M0052158 GGPDIJIF_00005 5548 4 Skin 0.14 protein_coding synonymous_variant LOW 834G>A Thr278Thr
M0052159 GGPDIJIF_00005 5572 4 Skin 0.14 protein_coding synonymous_variant LOW 858C>T Gly286Gly
M0052160 GGPDIJIF_00005 5602 3 Skin 0.10 protein_coding synonymous_variant LOW 888C>T Ala296Ala
M0052161 GGPDIJIF_00005 5660 5 Skin 0.17 protein_coding missense_variant MODERATE 946G>T Val316Leu
M0052162 GGPDIJIF_00005 5734 5 Skin 0.17 protein_coding synonymous_variant LOW 1020A>G Glu340Glu
M0052163 GGPDIJIF_00005 5743 4 Skin 0.14 protein_coding synonymous_variant LOW 1029T>C Leu343Leu
M0052164 GGPDIJIF_00005 5761 5 Skin 0.17 protein_coding synonymous_variant LOW 1047C>T Thr349Thr
M0052165 GGPDIJIF_00005 5788 5 Skin 0.17 protein_coding synonymous_variant LOW 1074C>T Tyr358Tyr
M0052166 GGPDIJIF_00005 5812 4 Skin 0.14 protein_coding synonymous_variant LOW 1098C>T Asp366Asp
M0052167 GGPDIJIF_00005 5818 4 Skin 0.14 protein_coding synonymous_variant LOW 1104C>T Ile368Ile
M0052168 GGPDIJIF_00005 5845 5 Skin 0.17 protein_coding synonymous_variant LOW 1131T>G Gly377Gly
M0052169 GGPDIJIF_00005 5875 5 Skin 0.17 protein_coding synonymous_variant LOW 1161T>C Asn387Asn
M0052170 GGPDIJIF_00005 5917 5 Skin 0.17 protein_coding synonymous_variant LOW 1203G>A Ala401Ala
M0052171 GGPDIJIF_00005 6397 3 Skin 0.10 protein_coding synonymous_variant LOW 1683T>C Arg561Arg
M0052172 GGPDIJIF_00005 6736 4 Skin 0.14 protein_coding synonymous_variant LOW 2022T>C Asn674Asn
M0052173 GGPDIJIF_00005 6744 4 Skin 0.14 protein_coding missense_variant MODERATE 2030C>A Thr677Lys
M0052174 GGPDIJIF_00005 6749 6 Skin 0.21 protein_coding missense_variant MODERATE 2035A>G Asn679Asp
M0052175 GGPDIJIF_00005 6752 6 Skin 0.21 protein_coding missense_variant MODERATE 2038C>G Arg680Gly
M0052176 GGPDIJIF_00004 4212 3 Skin 0.10 protein_coding missense_variant MODERATE 1679G>T Gly560Val
M0052177 GGPDIJIF_00004 4274 3 Skin 0.10 protein_coding synonymous_variant LOW 1741T>C Leu581Leu
M0052178 GGPDIJIF_00004 4339 3 Skin 0.10 protein_coding synonymous_variant LOW 1806T>C Ser602Ser
M0052179 GGPDIJIF_00004 4429 3 Skin 0.10 protein_coding synonymous_variant LOW 1896C>G Leu632Leu
M0052180 GGPDIJIF_00004 4460 3 Skin 0.10 protein_coding synonymous_variant LOW 1927C>T Leu643Leu
M0052181 GGPDIJIF_00004 4480 3 Skin 0.10 protein_coding synonymous_variant LOW 1947G>A Ala649Ala
M0052182 GGPDIJIF_00004 4484 3 Skin 0.10 protein_coding synonymous_variant LOW 1951C>T Leu651Leu
M0052183 GGPDIJIF_00004 4562 3 Skin 0.10 protein_coding missense_variant MODERATE 2029A>G Ile677Val
M0052184 GGPDIJIF_00005 4696 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -19A>G None
M0052185 GGPDIJIF_00005 4819 3 Skin 0.10 protein_coding missense_variant MODERATE 105G>T Glu35Asp
M0052186 GGPDIJIF_00005 4873 4 Skin 0.14 protein_coding synonymous_variant LOW 159A>G Ala53Ala
M0052187 GGPDIJIF_00005 4918 4 Skin 0.14 protein_coding synonymous_variant LOW 204T>C Ala68Ala
M0052188 GGPDIJIF_00005 4949 4 Skin 0.14 protein_coding missense_variant MODERATE 235C>A Gln79Lys
M0052189 GGPDIJIF_00005 5005 3 Skin 0.10 protein_coding synonymous_variant LOW 291A>G Leu97Leu
M0052190 GGPDIJIF_00005 5017 3 Skin 0.10 protein_coding synonymous_variant LOW 303A>G Ala101Ala
M0052191 GGPDIJIF_00005 5053 4 Skin 0.14 protein_coding synonymous_variant LOW 339C>G Thr113Thr
M0052192 GGPDIJIF_00005 5095 3 Skin 0.10 protein_coding synonymous_variant LOW 381C>T Tyr127Tyr
M0052193 GGPDIJIF_00005 5098 4 Skin 0.14 protein_coding synonymous_variant LOW 384T>C Leu128Leu
M0052194 GGPDIJIF_00005 5161 3 Skin 0.10 protein_coding synonymous_variant LOW 447C>T Pro149Pro
M0052195 GGPDIJIF_00005 5169 3 Skin 0.10 protein_coding missense_variant MODERATE 455A>T Tyr152Phe
M0052196 GGPDIJIF_00005 5179 3 Skin 0.10 protein_coding synonymous_variant LOW 465C>T Ser155Ser
M0052197 GGPDIJIF_00005 5236 3 Skin 0.10 protein_coding missense_variant MODERATE 522A>G Ile174Met
M0052198 GGPDIJIF_00005 5275 3 Skin 0.10 protein_coding synonymous_variant LOW 561A>G Leu187Leu
M0052199 GGPDIJIF_00005 5309 3 Skin 0.10 protein_coding missense_variant MODERATE 595C>A Gln199Lys
M0052200 GGPDIJIF_00005 5329 3 Skin 0.10 protein_coding synonymous_variant LOW 615G>A Glu205Glu
M0052201 GGPDIJIF_00005 5656 3 Skin 0.10 protein_coding synonymous_variant LOW 942T>C Gly314Gly
M0052202 GGPDIJIF_00005 6005 4 Skin 0.14 protein_coding synonymous_variant LOW 1291T>C Leu431Leu
M0052203 GGPDIJIF_00005 6007 4 Skin 0.14 protein_coding synonymous_variant LOW 1293G>A Leu431Leu
M0052204 GGPDIJIF_00005 6052 4 Skin 0.14 protein_coding synonymous_variant LOW 1338A>G Thr446Thr
M0052205 GGPDIJIF_00005 6088 4 Skin 0.14 protein_coding synonymous_variant LOW 1374C>T Phe458Phe
M0052206 GGPDIJIF_00005 6559 4 Skin 0.14 protein_coding synonymous_variant LOW 1845A>T Thr615Thr
M0052207 GGPDIJIF_00005 6667 3 Skin 0.10 protein_coding synonymous_variant LOW 1953C>A Pro651Pro
M0052208 GGPDIJIF_00005 6671 3 Skin 0.10 protein_coding missense_variant MODERATE 1957G>C Val653Leu
M0052209 GGPDIJIF_00006 7638 4 Skin 0.14 protein_coding synonymous_variant LOW 582T>C Asp194Asp
M0052210 GGPDIJIF_00006 7675 5 Skin 0.17 protein_coding synonymous_variant LOW 619C>A Arg207Arg
M0052211 GGPDIJIF_00005 4889 3 Skin 0.10 protein_coding missense_variant MODERATE 175T>C Ser59Pro
M0052212 GGPDIJIF_00005 6607 3 Skin 0.10 protein_coding synonymous_variant LOW 1893G>T Gly631Gly
M0052213 GGPDIJIF_00005 6757 4 Skin 0.14 protein_coding synonymous_variant LOW 2043T>C Tyr681Tyr
M0052214 GGPDIJIF_00006 7773 3 Skin 0.10 protein_coding synonymous_variant LOW 717C>A Ala239Ala
M0052215 GGPDIJIF_00006 7884 3 Skin 0.10 protein_coding synonymous_variant LOW 828C>T Ala276Ala
M0052216 GGPDIJIF_00006 8199 3 Skin 0.10 protein_coding synonymous_variant LOW 1143T>C Ile381Ile






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term