Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2752
  Reference Plasmid   1111525849862132_bin.6__k141_470488
  Reference Plasmid Size   10702
  Reference Plasmid GC Content   0.58
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0054618 OFCAIEKF_00002 1984 34 Skin 0.87 protein_coding missense_variant MODERATE 331T>C Tyr111His
M0054619 OFCAIEKF_00003 2653 36 Skin 0.92 protein_coding missense_variant MODERATE 1082C>T Thr361Ile
M0054620 OFCAIEKF_00006 5732 22 Skin 0.56 protein_coding synonymous_variant LOW 120C>G Leu40Leu
M0054621 OFCAIEKF_00001 273 12 Skin 0.31 protein_coding downstream_gene_variant MODIFIER *52A>C None
M0054622 OFCAIEKF_00001 280 12 Skin 0.31 protein_coding downstream_gene_variant MODIFIER *45C>T None
M0054623 OFCAIEKF_00001 315 10 Skin 0.26 protein_coding downstream_gene_variant MODIFIER *10G>A None
M0054624 OFCAIEKF_00001 325 10 Skin 0.26 protein_coding splice_region_variant&stop_retained_variant LOW 915G>A Ter305Ter
M0054625 OFCAIEKF_00001 348 10 Skin 0.26 protein_coding missense_variant MODERATE 892C>T Leu298Phe
M0054626 OFCAIEKF_00001 437 12 Skin 0.31 protein_coding missense_variant MODERATE 803T>C Ile268Thr
M0054627 OFCAIEKF_00001 608 10 Skin 0.26 protein_coding missense_variant MODERATE 632C>T Ala211Val
M0054628 OFCAIEKF_00001 610 10 Skin 0.26 protein_coding synonymous_variant LOW 630A>C Gly210Gly
M0054629 OFCAIEKF_00001 658 11 Skin 0.28 protein_coding synonymous_variant LOW 582A>G Pro194Pro
M0054630 OFCAIEKF_00001 667 10 Skin 0.26 protein_coding synonymous_variant LOW 573G>A Thr191Thr
M0054631 OFCAIEKF_00001 673 10 Skin 0.26 protein_coding synonymous_variant LOW 567C>T Leu189Leu
M0054632 OFCAIEKF_00001 674 10 Skin 0.26 protein_coding missense_variant MODERATE 566T>G Leu189Arg
M0054633 OFCAIEKF_00001 988 11 Skin 0.28 protein_coding synonymous_variant LOW 252G>A Leu84Leu
M0054634 OFCAIEKF_00001 1000 12 Skin 0.31 protein_coding synonymous_variant LOW 240T>C Thr80Thr
M0054635 OFCAIEKF_00001 1027 12 Skin 0.31 protein_coding missense_variant MODERATE 213C>A Asp71Glu
M0054636 OFCAIEKF_00001 1040 4 Skin 0.10 protein_coding missense_variant MODERATE 200A>G Asp67Gly
M0054637 OFCAIEKF_00001 1102 11 Skin 0.28 protein_coding synonymous_variant LOW 138T>C Ala46Ala
M0054638 OFCAIEKF_00001 1123 12 Skin 0.31 protein_coding synonymous_variant LOW 117A>G Lys39Lys
M0054639 OFCAIEKF_00002 1248 14 Skin 0.36 protein_coding missense_variant MODERATE 1067C>T Ala356Val
M0054640 OFCAIEKF_00002 1255 11 Skin 0.28 protein_coding stop_gained HIGH 1060C>T Arg354*
M0054641 OFCAIEKF_00002 1304 11 Skin 0.28 protein_coding synonymous_variant LOW 1011C>T Arg337Arg
M0054642 OFCAIEKF_00002 1520 12 Skin 0.31 protein_coding synonymous_variant LOW 795T>C Tyr265Tyr
M0054643 OFCAIEKF_00002 1543 12 Skin 0.31 protein_coding missense_variant MODERATE 772G>T Val258Phe
M0054644 OFCAIEKF_00002 1556 3 Skin 0.08 protein_coding synonymous_variant LOW 759C>T Pro253Pro
M0054645 OFCAIEKF_00002 1586 3 Skin 0.08 protein_coding synonymous_variant LOW 729C>T Asp243Asp
M0054646 OFCAIEKF_00002 1648 11 Skin 0.28 protein_coding missense_variant MODERATE 667G>A Ala223Thr
M0054647 OFCAIEKF_00002 1678 3 Skin 0.08 protein_coding missense_variant MODERATE 637C>G Gln213Glu
M0054648 OFCAIEKF_00002 1745 10 Skin 0.26 protein_coding missense_variant MODERATE 570A>G Ile190Met
M0054649 OFCAIEKF_00002 1804 12 Skin 0.31 protein_coding missense_variant MODERATE 511G>A Asp171Asn
M0054650 OFCAIEKF_00002 1849 12 Skin 0.31 protein_coding missense_variant MODERATE 466T>G Phe156Val
M0054651 OFCAIEKF_00002 1856 12 Skin 0.31 protein_coding synonymous_variant LOW 459T>C His153His
M0054652 OFCAIEKF_00002 1870 10 Skin 0.26 protein_coding missense_variant MODERATE 445A>G Ile149Val
M0054653 OFCAIEKF_00002 1872 10 Skin 0.26 protein_coding missense_variant MODERATE 443G>A Arg148His
M0054654 OFCAIEKF_00002 1931 7 Skin 0.18 protein_coding synonymous_variant LOW 384T>C Val128Val
M0054655 OFCAIEKF_00002 2071 3 Skin 0.08 protein_coding missense_variant MODERATE 244C>T Pro82Ser
M0054656 OFCAIEKF_00002 2075 6 Skin 0.15 protein_coding synonymous_variant LOW 240A>G Pro80Pro
M0054657 OFCAIEKF_00002 2090 18 Skin 0.46 protein_coding synonymous_variant LOW 225T>C Asn75Asn
M0054658 OFCAIEKF_00002 2117 15 Skin 0.38 protein_coding synonymous_variant LOW 198T>C Phe66Phe
M0054659 OFCAIEKF_00002 2153 19 Skin 0.49 protein_coding synonymous_variant LOW 162T>C Leu54Leu
M0054660 OFCAIEKF_00002 2165 19 Skin 0.49 protein_coding synonymous_variant LOW 150T>C Tyr50Tyr
M0054661 OFCAIEKF_00002 2180 3 Skin 0.08 protein_coding missense_variant MODERATE 135C>G Ser45Arg
M0054662 OFCAIEKF_00002 2181 7 Skin 0.18 protein_coding missense_variant MODERATE 134G>C Ser45Thr
M0054663 OFCAIEKF_00002 2204 3 Skin 0.08 protein_coding synonymous_variant LOW 111C>T Thr37Thr
M0054664 OFCAIEKF_00003 2325 19 Skin 0.49 protein_coding synonymous_variant LOW 1410G>A Lys470Lys
M0054665 OFCAIEKF_00003 2343 15 Skin 0.38 protein_coding synonymous_variant LOW 1392C>T Ile464Ile
M0054666 OFCAIEKF_00003 2364 15 Skin 0.38 protein_coding synonymous_variant LOW 1371T>C Asp457Asp
M0054667 OFCAIEKF_00003 2394 15 Skin 0.38 protein_coding synonymous_variant LOW 1341C>T Phe447Phe
M0054668 OFCAIEKF_00003 2435 19 Skin 0.49 protein_coding missense_variant MODERATE 1300C>T Leu434Phe
M0054669 OFCAIEKF_00003 2475 3 Skin 0.08 protein_coding synonymous_variant LOW 1260A>G Val420Val
M0054670 OFCAIEKF_00003 2510 19 Skin 0.49 protein_coding missense_variant MODERATE 1225A>G Ile409Val
M0054671 OFCAIEKF_00003 2538 3 Skin 0.08 protein_coding synonymous_variant LOW 1197C>T Arg399Arg
M0054672 OFCAIEKF_00003 2559 19 Skin 0.49 protein_coding synonymous_variant LOW 1176T>C Leu392Leu
M0054673 OFCAIEKF_00001 88 10 Skin 0.26 protein_coding downstream_gene_variant MODIFIER *237G>A None
M0054674 OFCAIEKF_00001 208 9 Skin 0.23 protein_coding downstream_gene_variant MODIFIER *117C>T None
M0054675 OFCAIEKF_00001 514 11 Skin 0.28 protein_coding missense_variant MODERATE 726A>C Gln242His
M0054676 OFCAIEKF_00001 768 9 Skin 0.23 protein_coding missense_variant MODERATE 472A>G Ile158Val
M0054677 OFCAIEKF_00001 775 9 Skin 0.23 protein_coding synonymous_variant LOW 465G>A Gly155Gly
M0054678 OFCAIEKF_00002 1939 6 Skin 0.15 protein_coding missense_variant MODERATE 376A>C Ser126Arg
M0054679 OFCAIEKF_00002 2252 7 Skin 0.18 protein_coding synonymous_variant LOW 63C>T Asp21Asp
M0054680 OFCAIEKF_00003 2323 11 Skin 0.28 protein_coding missense_variant MODERATE 1412A>G Glu471Gly
M0054681 OFCAIEKF_00003 2667 19 Skin 0.49 protein_coding synonymous_variant LOW 1068A>G Leu356Leu
M0054682 OFCAIEKF_00003 2772 18 Skin 0.46 protein_coding synonymous_variant LOW 963T>C Ile321Ile
M0054683 OFCAIEKF_00003 2777 18 Skin 0.46 protein_coding synonymous_variant LOW 958T>C Leu320Leu
M0054684 OFCAIEKF_00003 2799 24 Skin 0.62 protein_coding synonymous_variant LOW 936T>C Asn312Asn
M0054685 OFCAIEKF_00003 2805 18 Skin 0.46 protein_coding synonymous_variant LOW 930A>G Ala310Ala
M0054686 OFCAIEKF_00003 2823 18 Skin 0.46 protein_coding synonymous_variant LOW 912T>C Ala304Ala
M0054687 OFCAIEKF_00003 2841 18 Skin 0.46 protein_coding synonymous_variant LOW 894C>T Thr298Thr
M0054688 OFCAIEKF_00003 2859 18 Skin 0.46 protein_coding synonymous_variant LOW 876G>A Leu292Leu
M0054689 OFCAIEKF_00003 2892 18 Skin 0.46 protein_coding synonymous_variant LOW 843T>C Ala281Ala
M0054690 OFCAIEKF_00003 2967 14 Skin 0.36 protein_coding synonymous_variant LOW 768C>T Arg256Arg
M0054691 OFCAIEKF_00003 2988 14 Skin 0.36 protein_coding synonymous_variant LOW 747C>T Tyr249Tyr
M0054692 OFCAIEKF_00003 2994 14 Skin 0.36 protein_coding synonymous_variant LOW 741C>T Thr247Thr
M0054693 OFCAIEKF_00003 3023 18 Skin 0.46 protein_coding missense_variant MODERATE 712A>G Ile238Val
M0054694 OFCAIEKF_00003 3083 14 Skin 0.36 protein_coding missense_variant MODERATE 652A>G Ile218Val
M0054695 OFCAIEKF_00003 3112 24 Skin 0.62 protein_coding missense_variant MODERATE 623G>A Arg208His
M0054696 OFCAIEKF_00003 3171 14 Skin 0.36 protein_coding synonymous_variant LOW 564C>T Ala188Ala
M0054697 OFCAIEKF_00003 3246 15 Skin 0.38 protein_coding synonymous_variant LOW 489C>T Ile163Ile
M0054698 OFCAIEKF_00003 3261 19 Skin 0.49 protein_coding synonymous_variant LOW 474A>G Thr158Thr
M0054699 OFCAIEKF_00003 3285 19 Skin 0.49 protein_coding synonymous_variant LOW 450T>C Ser150Ser
M0054700 OFCAIEKF_00003 3290 19 Skin 0.49 protein_coding synonymous_variant LOW 445T>C Leu149Leu
M0054701 OFCAIEKF_00003 3315 19 Skin 0.49 protein_coding synonymous_variant LOW 420T>C Ala140Ala
M0054702 OFCAIEKF_00003 3363 14 Skin 0.36 protein_coding synonymous_variant LOW 372G>T Leu124Leu
M0054703 OFCAIEKF_00003 3389 18 Skin 0.46 protein_coding synonymous_variant LOW 346T>C Leu116Leu
M0054704 OFCAIEKF_00003 3459 18 Skin 0.46 protein_coding synonymous_variant LOW 276T>C Tyr92Tyr
M0054705 OFCAIEKF_00003 3507 18 Skin 0.46 protein_coding synonymous_variant LOW 228T>C Leu76Leu
M0054706 OFCAIEKF_00003 3645 12 Skin 0.31 protein_coding synonymous_variant LOW 90C>T Thr30Thr
M0054707 OFCAIEKF_00003 3674 14 Skin 0.36 protein_coding missense_variant MODERATE 61G>A Ala21Thr
M0054708 OFCAIEKF_00004 3794 12 Skin 0.31 protein_coding synonymous_variant LOW 591T>C Ala197Ala
M0054709 OFCAIEKF_00004 3822 16 Skin 0.41 protein_coding missense_variant MODERATE 563A>C His188Pro
M0054710 OFCAIEKF_00004 3839 12 Skin 0.31 protein_coding synonymous_variant LOW 546C>T Ser182Ser
M0054711 OFCAIEKF_00004 3854 16 Skin 0.41 protein_coding synonymous_variant LOW 531A>G Leu177Leu
M0054712 OFCAIEKF_00004 3905 14 Skin 0.36 protein_coding synonymous_variant LOW 480T>C Gly160Gly
M0054713 OFCAIEKF_00004 3911 12 Skin 0.31 protein_coding synonymous_variant LOW 474A>G Arg158Arg
M0054714 OFCAIEKF_00004 3918 14 Skin 0.36 protein_coding missense_variant MODERATE 467A>T Tyr156Phe
M0054715 OFCAIEKF_00004 3929 12 Skin 0.31 protein_coding synonymous_variant LOW 456A>G Thr152Thr
M0054716 OFCAIEKF_00004 3947 14 Skin 0.36 protein_coding synonymous_variant LOW 438A>T Gly146Gly
M0054717 OFCAIEKF_00004 3983 14 Skin 0.36 protein_coding synonymous_variant LOW 402G>A Glu134Glu
M0054718 OFCAIEKF_00004 3995 12 Skin 0.31 protein_coding synonymous_variant LOW 390C>T Leu130Leu
M0054719 OFCAIEKF_00004 4001 12 Skin 0.31 protein_coding synonymous_variant LOW 384C>T Ser128Ser
M0054720 OFCAIEKF_00004 4010 12 Skin 0.31 protein_coding synonymous_variant LOW 375T>G Leu125Leu
M0054721 OFCAIEKF_00004 4022 12 Skin 0.31 protein_coding synonymous_variant LOW 363C>G Val121Val
M0054722 OFCAIEKF_00004 4052 12 Skin 0.31 protein_coding synonymous_variant LOW 333C>T Ala111Ala
M0054723 OFCAIEKF_00004 4077 12 Skin 0.31 protein_coding missense_variant MODERATE 308A>G Asp103Gly
M0054724 OFCAIEKF_00004 4139 12 Skin 0.31 protein_coding synonymous_variant LOW 246T>C Asn82Asn
M0054725 OFCAIEKF_00004 4167 14 Skin 0.36 protein_coding missense_variant MODERATE 218G>A Arg73Lys
M0054726 OFCAIEKF_00004 4289 14 Skin 0.36 protein_coding synonymous_variant LOW 96T>C Gly32Gly
M0054727 OFCAIEKF_00004 4338 14 Skin 0.36 protein_coding missense_variant MODERATE 47T>C Val16Ala
M0054728 OFCAIEKF_00001 4426 14 Skin 0.36 protein_coding upstream_gene_variant MODIFIER -3187G>T None
M0054729 OFCAIEKF_00001 4433 12 Skin 0.31 protein_coding upstream_gene_variant MODIFIER -3194A>G None
M0054730 OFCAIEKF_00001 4466 6 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3227C>A None
M0054731 OFCAIEKF_00005 4588 12 Skin 0.31 protein_coding synonymous_variant LOW 807A>G Gly269Gly
M0054732 OFCAIEKF_00005 4789 11 Skin 0.28 protein_coding missense_variant MODERATE 606G>T Gln202His
M0054733 OFCAIEKF_00005 4792 11 Skin 0.28 protein_coding synonymous_variant LOW 603A>G Arg201Arg
M0054734 OFCAIEKF_00005 4853 13 Skin 0.33 protein_coding missense_variant MODERATE 542A>C Glu181Ala
M0054735 OFCAIEKF_00005 4945 12 Skin 0.31 protein_coding synonymous_variant LOW 450T>C Phe150Phe
M0054736 OFCAIEKF_00005 5028 13 Skin 0.33 protein_coding missense_variant MODERATE 367T>C Cys123Arg
M0054737 OFCAIEKF_00005 5047 13 Skin 0.33 protein_coding synonymous_variant LOW 348T>C Ala116Ala
M0054738 OFCAIEKF_00005 5060 13 Skin 0.33 protein_coding missense_variant MODERATE 335G>A Arg112Gln
M0054739 OFCAIEKF_00005 5125 11 Skin 0.28 protein_coding synonymous_variant LOW 270T>A Gly90Gly
M0054740 OFCAIEKF_00005 5167 10 Skin 0.26 protein_coding synonymous_variant LOW 228C>G Ser76Ser
M0054741 OFCAIEKF_00005 5188 10 Skin 0.26 protein_coding synonymous_variant LOW 207A>T Gly69Gly
M0054742 OFCAIEKF_00005 5196 10 Skin 0.26 protein_coding missense_variant MODERATE 199A>G Ile67Val
M0054743 OFCAIEKF_00005 5204 12 Skin 0.31 protein_coding missense_variant MODERATE 191A>G His64Arg
M0054744 OFCAIEKF_00005 5284 10 Skin 0.26 protein_coding synonymous_variant LOW 111G>A Ala37Ala
M0054745 OFCAIEKF_00005 5347 13 Skin 0.33 protein_coding synonymous_variant LOW 48G>A Gln16Gln
M0054746 OFCAIEKF_00005 5359 13 Skin 0.33 protein_coding synonymous_variant LOW 36A>G Arg12Arg
M0054747 OFCAIEKF_00005 5383 13 Skin 0.33 protein_coding synonymous_variant LOW 12C>T Asp4Asp
M0054748 OFCAIEKF_00001 5426 5 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4187A>G None
M0054749 OFCAIEKF_00001 5501 10 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -4262C>T None
M0054750 OFCAIEKF_00001 5582 11 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -4343T>C None
M0054751 OFCAIEKF_00001 5584 9 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -4345C>T None
M0054752 OFCAIEKF_00006 5664 10 Skin 0.26 protein_coding missense_variant MODERATE 52G>A Val18Ile
M0054753 OFCAIEKF_00006 5729 10 Skin 0.26 protein_coding synonymous_variant LOW 117A>G Leu39Leu
M0054754 OFCAIEKF_00006 5774 6 Skin 0.15 protein_coding synonymous_variant LOW 162G>A Ser54Ser
M0054755 OFCAIEKF_00006 5789 15 Skin 0.38 protein_coding synonymous_variant LOW 177T>C Thr59Thr
M0054756 OFCAIEKF_00006 5792 6 Skin 0.15 protein_coding synonymous_variant LOW 180A>G Thr60Thr
M0054757 OFCAIEKF_00006 5801 6 Skin 0.15 protein_coding synonymous_variant LOW 189G>C Thr63Thr
M0054758 OFCAIEKF_00006 5820 6 Skin 0.15 protein_coding missense_variant MODERATE 208C>G Gln70Glu
M0054759 OFCAIEKF_00006 5871 8 Skin 0.21 protein_coding missense_variant MODERATE 259G>A Val87Ile
M0054760 OFCAIEKF_00006 5882 10 Skin 0.26 protein_coding synonymous_variant LOW 270G>A Ser90Ser
M0054761 OFCAIEKF_00006 5953 7 Skin 0.18 protein_coding missense_variant MODERATE 341A>G His114Arg
M0054762 OFCAIEKF_00006 5960 7 Skin 0.18 protein_coding synonymous_variant LOW 348T>C Val116Val
M0054763 OFCAIEKF_00006 5981 5 Skin 0.13 protein_coding synonymous_variant LOW 369A>G Lys123Lys
M0054764 OFCAIEKF_00006 5983 5 Skin 0.13 protein_coding missense_variant MODERATE 371C>G Ser124Cys
M0054765 OFCAIEKF_00006 6035 7 Skin 0.18 protein_coding synonymous_variant LOW 423T>C Thr141Thr
M0054766 OFCAIEKF_00006 6054 7 Skin 0.18 protein_coding missense_variant MODERATE 442A>G Ile148Val
M0054767 OFCAIEKF_00006 6062 5 Skin 0.13 protein_coding synonymous_variant LOW 450G>A Lys150Lys
M0054768 OFCAIEKF_00006 6071 5 Skin 0.13 protein_coding synonymous_variant LOW 459C>T Ser153Ser
M0054769 OFCAIEKF_00006 6072 5 Skin 0.13 protein_coding missense_variant MODERATE 460G>A Glu154Lys
M0054770 OFCAIEKF_00006 6074 7 Skin 0.18 protein_coding synonymous_variant LOW 462A>G Glu154Glu
M0054771 OFCAIEKF_00006 6075 5 Skin 0.13 protein_coding missense_variant MODERATE 463C>T His155Tyr
M0054772 OFCAIEKF_00006 6114 9 Skin 0.23 protein_coding missense_variant MODERATE 502A>G Arg168Gly
M0054773 OFCAIEKF_00006 6122 6 Skin 0.15 protein_coding synonymous_variant LOW 510C>A Ala170Ala
M0054774 OFCAIEKF_00006 6125 9 Skin 0.23 protein_coding synonymous_variant LOW 513A>G Ser171Ser
M0054775 OFCAIEKF_00006 6129 9 Skin 0.23 protein_coding missense_variant MODERATE 517G>A Ala173Thr
M0054776 OFCAIEKF_00006 6162 6 Skin 0.15 protein_coding missense_variant MODERATE 550G>A Glu184Lys
M0054777 OFCAIEKF_00006 6197 4 Skin 0.10 protein_coding synonymous_variant LOW 585C>T Val195Val
M0054778 OFCAIEKF_00006 6227 4 Skin 0.10 protein_coding synonymous_variant LOW 615C>A Gly205Gly
M0054779 OFCAIEKF_00006 6268 4 Skin 0.10 protein_coding missense_variant MODERATE 656C>T Ala219Val
M0054780 OFCAIEKF_00008 7895 4 Skin 0.10 protein_coding synonymous_variant LOW 174T>C Asp58Asp
M0054781 OFCAIEKF_00009 8439 3 Skin 0.08 protein_coding missense_variant MODERATE 71A>T Asp24Val
M0054782 OFCAIEKF_00009 8462 3 Skin 0.08 protein_coding missense_variant MODERATE 94T>C Phe32Leu
M0054783 OFCAIEKF_00009 8474 3 Skin 0.08 protein_coding synonymous_variant LOW 106A>C Arg36Arg
M0054784 OFCAIEKF_00009 8494 3 Skin 0.08 protein_coding synonymous_variant LOW 126G>A Gly42Gly
M0054785 OFCAIEKF_00009 8518 3 Skin 0.08 protein_coding synonymous_variant LOW 150G>A Leu50Leu
M0054786 OFCAIEKF_00009 8545 3 Skin 0.08 protein_coding synonymous_variant LOW 177C>T Leu59Leu
M0054787 OFCAIEKF_00003 3238 4 Skin 0.10 protein_coding missense_variant MODERATE 497G>A Arg166Gln
M0054788 OFCAIEKF_00003 3608 3 Skin 0.08 protein_coding missense_variant MODERATE 127T>C Phe43Leu
M0054789 OFCAIEKF_00006 6454 4 Skin 0.10 protein_coding missense_variant MODERATE 842T>C Ile281Thr
M0054790 OFCAIEKF_00007 6655 5 Skin 0.13 protein_coding synonymous_variant LOW 1035T>C Ile345Ile
M0054791 OFCAIEKF_00007 6966 5 Skin 0.13 protein_coding missense_variant MODERATE 724C>G Leu242Val
M0054792 OFCAIEKF_00007 7096 3 Skin 0.08 protein_coding synonymous_variant LOW 594C>G Val198Val
M0054793 OFCAIEKF_00007 7152 5 Skin 0.13 protein_coding missense_variant MODERATE 538T>C Trp180Arg
M0054794 OFCAIEKF_00007 7192 5 Skin 0.13 protein_coding synonymous_variant LOW 498G>T Pro166Pro
M0054795 OFCAIEKF_00007 7645 3 Skin 0.08 protein_coding synonymous_variant LOW 45A>G Thr15Thr
M0054796 OFCAIEKF_00008 8017 3 Skin 0.08 protein_coding missense_variant MODERATE 52T>C Trp18Arg
M0054797 OFCAIEKF_00008 8035 4 Skin 0.10 protein_coding missense_variant MODERATE 34A>G Ser12Gly
M0054798 OFCAIEKF_00003 8075 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4341C>T None
M0054799 OFCAIEKF_00003 8170 4 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4436T>C None
M0054800 OFCAIEKF_00003 8175 3 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4441T>C None
M0054801 OFCAIEKF_00003 3120 3 Skin 0.08 protein_coding synonymous_variant LOW 615C>G Arg205Arg
M0054802 OFCAIEKF_00001 1228 3 Skin 0.08 protein_coding synonymous_variant LOW 12C>T Ala4Ala
M0054803 OFCAIEKF_00002 1261 3 Skin 0.08 protein_coding missense_variant MODERATE 1054T>G Phe352Val
M0054804 OFCAIEKF_00002 1277 3 Skin 0.08 protein_coding synonymous_variant LOW 1038T>C Leu346Leu
M0054805 OFCAIEKF_00002 1301 3 Skin 0.08 protein_coding synonymous_variant LOW 1014G>A Thr338Thr
M0054806 OFCAIEKF_00002 1309 3 Skin 0.08 protein_coding missense_variant MODERATE 1006A>T Thr336Ser
M0054807 OFCAIEKF_00002 1314 3 Skin 0.08 protein_coding missense_variant MODERATE 1001G>A Gly334Asp
M0054808 OFCAIEKF_00002 1582 3 Skin 0.08 protein_coding synonymous_variant LOW 733T>C Leu245Leu
M0054809 OFCAIEKF_00002 1638 3 Skin 0.08 protein_coding missense_variant MODERATE 677G>A Arg226His
M0054810 OFCAIEKF_00002 2150 4 Skin 0.10 protein_coding synonymous_variant LOW 165C>T Pro55Pro
M0054811 OFCAIEKF_00002 2188 4 Skin 0.10 protein_coding synonymous_variant LOW 127C>A Arg43Arg
M0054812 OFCAIEKF_00002 2209 4 Skin 0.10 protein_coding missense_variant MODERATE 106T>C Ser36Pro
M0054813 OFCAIEKF_00002 2219 4 Skin 0.10 protein_coding synonymous_variant LOW 96G>A Ala32Ala
M0054814 OFCAIEKF_00002 2262 4 Skin 0.10 protein_coding missense_variant MODERATE 53G>A Arg18Lys
M0054815 OFCAIEKF_00002 2288 4 Skin 0.10 protein_coding synonymous_variant LOW 27C>A Ile9Ile
M0054816 OFCAIEKF_00003 2328 4 Skin 0.10 protein_coding synonymous_variant LOW 1407G>A Leu469Leu
M0054817 OFCAIEKF_00003 2388 3 Skin 0.08 protein_coding synonymous_variant LOW 1347C>T Phe449Phe
M0054818 OFCAIEKF_00003 2592 4 Skin 0.10 protein_coding synonymous_variant LOW 1143G>A Gly381Gly
M0054819 OFCAIEKF_00003 2745 4 Skin 0.10 protein_coding synonymous_variant LOW 990A>G Gly330Gly
M0054820 OFCAIEKF_00003 2949 4 Skin 0.10 protein_coding synonymous_variant LOW 786C>T Ala262Ala
M0054821 OFCAIEKF_00003 3002 4 Skin 0.10 protein_coding missense_variant MODERATE 733G>A Ala245Thr
M0054822 OFCAIEKF_00003 3030 4 Skin 0.10 protein_coding missense_variant MODERATE 705T>G Ile235Met
M0054823 OFCAIEKF_00003 3085 4 Skin 0.10 protein_coding missense_variant MODERATE 650C>T Ala217Val
M0054824 OFCAIEKF_00003 3213 4 Skin 0.10 protein_coding synonymous_variant LOW 522T>C Asn174Asn
M0054825 OFCAIEKF_00003 3276 4 Skin 0.10 protein_coding synonymous_variant LOW 459G>A Glu153Glu
M0054826 OFCAIEKF_00003 3312 4 Skin 0.10 protein_coding synonymous_variant LOW 423C>T Ala141Ala
M0054827 OFCAIEKF_00003 3322 4 Skin 0.10 protein_coding missense_variant MODERATE 413T>G Phe138Cys
M0054828 OFCAIEKF_00003 3349 4 Skin 0.10 protein_coding missense_variant MODERATE 386C>T Ala129Val
M0054829 OFCAIEKF_00003 3366 4 Skin 0.10 protein_coding synonymous_variant LOW 369C>T Cys123Cys
M0054830 OFCAIEKF_00003 3407 4 Skin 0.10 protein_coding missense_variant MODERATE 328A>T Thr110Ser
M0054831 OFCAIEKF_00003 3434 4 Skin 0.10 protein_coding synonymous_variant LOW 301C>A Arg101Arg
M0054832 OFCAIEKF_00003 3462 4 Skin 0.10 protein_coding synonymous_variant LOW 273C>A Gly91Gly
M0054833 OFCAIEKF_00003 3710 3 Skin 0.08 protein_coding missense_variant MODERATE 25G>C Val9Leu
M0054834 OFCAIEKF_00004 4086 3 Skin 0.08 protein_coding missense_variant MODERATE 299A>G Asp100Gly
M0054835 OFCAIEKF_00004 4088 3 Skin 0.08 protein_coding synonymous_variant LOW 297T>C Asp99Asp
M0054836 OFCAIEKF_00006 6130 3 Skin 0.08 protein_coding missense_variant MODERATE 518C>G Ala173Gly
M0054837 OFCAIEKF_00006 6157 3 Skin 0.08 protein_coding missense_variant MODERATE 545C>T Ala182Val
M0054838 OFCAIEKF_00006 6173 3 Skin 0.08 protein_coding synonymous_variant LOW 561A>C Val187Val
M0054839 OFCAIEKF_00006 6224 3 Skin 0.08 protein_coding synonymous_variant LOW 612G>A Lys204Lys
M0054840 OFCAIEKF_00007 6868 3 Skin 0.08 protein_coding synonymous_variant LOW 822G>A Pro274Pro






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term