Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2756
  Reference Plasmid   1111525849862212_bin.16__k141_257043
  Reference Plasmid Size   11091
  Reference Plasmid GC Content   0.75
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0055809 NCNPKCNN_00002 2827 4 Skin 0.17 protein_coding synonymous_variant LOW 87C>T Gly29Gly
M0055810 NCNPKCNN_00002 2854 10 Skin 0.43 protein_coding synonymous_variant LOW 60A>G Pro20Pro
M0055811 NCNPKCNN_00002 2855 10 Skin 0.43 protein_coding missense_variant MODERATE 59C>T Pro20Leu
M0055812 NCNPKCNN_00002 2884 10 Skin 0.43 protein_coding synonymous_variant LOW 30T>C Ala10Ala
M0055813 NCNPKCNN_00002 2885 10 Skin 0.43 protein_coding missense_variant MODERATE 29C>G Ala10Gly
M0055814 NCNPKCNN_00002 2894 8 Skin 0.35 protein_coding missense_variant MODERATE 20G>C Arg7Pro
M0055815 NCNPKCNN_00002 2896 10 Skin 0.43 protein_coding synonymous_variant LOW 18A>C Val6Val
M0055816 NCNPKCNN_00002 2898 8 Skin 0.35 protein_coding missense_variant MODERATE 16G>C Val6Leu
M0055817 NCNPKCNN_00002 2899 5 Skin 0.22 protein_coding synonymous_variant LOW 15T>C Arg5Arg
M0055818 NCNPKCNN_00002 2900 5 Skin 0.22 protein_coding missense_variant MODERATE 14G>T Arg5Leu
M0055819 NCNPKCNN_00003 2964 10 Skin 0.43 protein_coding missense_variant MODERATE 2198A>G Asp733Gly
M0055820 NCNPKCNN_00003 2994 11 Skin 0.48 protein_coding missense_variant MODERATE 2168G>A Arg723His
M0055821 NCNPKCNN_00003 3000 10 Skin 0.43 protein_coding missense_variant MODERATE 2162A>G His721Arg
M0055822 NCNPKCNN_00003 3020 10 Skin 0.43 protein_coding synonymous_variant LOW 2142T>C Arg714Arg
M0055823 NCNPKCNN_00003 3069 11 Skin 0.48 protein_coding missense_variant MODERATE 2093A>T Asp698Val
M0055824 NCNPKCNN_00003 3182 10 Skin 0.43 protein_coding synonymous_variant LOW 1980G>C Leu660Leu
M0055825 NCNPKCNN_00003 3283 7 Skin 0.30 protein_coding missense_variant MODERATE 1879G>A Val627Ile
M0055826 NCNPKCNN_00003 3424 7 Skin 0.30 protein_coding missense_variant MODERATE 1738C>G Gln580Glu
M0055827 NCNPKCNN_00003 3515 7 Skin 0.30 protein_coding synonymous_variant LOW 1647T>G Gly549Gly
M0055828 NCNPKCNN_00003 3554 6 Skin 0.26 protein_coding synonymous_variant LOW 1608C>G Pro536Pro
M0055829 NCNPKCNN_00003 3580 9 Skin 0.39 protein_coding missense_variant MODERATE 1582G>T Ala528Ser
M0055830 NCNPKCNN_00003 3608 8 Skin 0.35 protein_coding synonymous_variant LOW 1554C>G Pro518Pro
M0055831 NCNPKCNN_00003 3611 8 Skin 0.35 protein_coding synonymous_variant LOW 1551A>G Ala517Ala
M0055832 NCNPKCNN_00003 3737 9 Skin 0.39 protein_coding synonymous_variant LOW 1425G>C Gly475Gly
M0055833 NCNPKCNN_00003 3741 10 Skin 0.43 protein_coding missense_variant MODERATE 1421T>C Val474Ala
M0055834 NCNPKCNN_00003 3744 11 Skin 0.48 protein_coding missense_variant MODERATE 1418G>T Cys473Phe
M0055835 NCNPKCNN_00003 3745 10 Skin 0.43 protein_coding missense_variant MODERATE 1417T>C Cys473Arg
M0055836 NCNPKCNN_00003 3823 6 Skin 0.26 protein_coding missense_variant MODERATE 1339T>A Ser447Thr
M0055837 NCNPKCNN_00003 3934 7 Skin 0.30 protein_coding missense_variant MODERATE 1228A>T Thr410Ser
M0055838 NCNPKCNN_00003 3949 6 Skin 0.26 protein_coding missense_variant MODERATE 1213A>C Ile405Leu
M0055839 NCNPKCNN_00003 3995 7 Skin 0.30 protein_coding synonymous_variant LOW 1167T>C Gly389Gly
M0055840 NCNPKCNN_00003 4232 4 Skin 0.17 protein_coding synonymous_variant LOW 930C>T Gly310Gly
M0055841 NCNPKCNN_00003 4280 5 Skin 0.22 protein_coding synonymous_variant LOW 882C>G Arg294Arg
M0055842 NCNPKCNN_00003 4409 11 Skin 0.48 protein_coding synonymous_variant LOW 753C>G Val251Val
M0055843 NCNPKCNN_00003 4455 5 Skin 0.22 protein_coding missense_variant MODERATE 707C>A Thr236Asn
M0055844 NCNPKCNN_00003 4619 10 Skin 0.43 protein_coding synonymous_variant LOW 543C>G Ser181Ser
M0055845 NCNPKCNN_00003 4717 9 Skin 0.39 protein_coding missense_variant MODERATE 445T>G Ser149Ala
M0055846 NCNPKCNN_00003 4750 9 Skin 0.39 protein_coding missense_variant MODERATE 412C>G Leu138Val
M0055847 NCNPKCNN_00003 4810 8 Skin 0.35 protein_coding missense_variant MODERATE 352A>G Thr118Ala
M0055848 NCNPKCNN_00003 4994 10 Skin 0.43 protein_coding synonymous_variant LOW 168G>C Thr56Thr
M0055849 NCNPKCNN_00003 4997 10 Skin 0.43 protein_coding synonymous_variant LOW 165G>C Val55Val
M0055850 NCNPKCNN_00003 5075 5 Skin 0.22 protein_coding synonymous_variant LOW 87T>A Gly29Gly
M0055851 NCNPKCNN_00003 5098 9 Skin 0.39 protein_coding missense_variant MODERATE 64T>C Ser22Pro
M0055852 NCNPKCNN_00003 5120 9 Skin 0.39 protein_coding synonymous_variant LOW 42T>C Ala14Ala
M0055853 NCNPKCNN_00003 5126 6 Skin 0.26 protein_coding synonymous_variant LOW 36C>T His12His
M0055854 NCNPKCNN_00001 5195 4 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3602T>C None
M0055855 NCNPKCNN_00004 5261 9 Skin 0.39 protein_coding synonymous_variant LOW 1386C>G Gly462Gly
M0055856 NCNPKCNN_00004 5303 7 Skin 0.30 protein_coding synonymous_variant LOW 1344T>C Gly448Gly
M0055857 NCNPKCNN_00004 5719 8 Skin 0.35 protein_coding missense_variant MODERATE 928A>G Ile310Val
M0055858 NCNPKCNN_00004 5744 8 Skin 0.35 protein_coding missense_variant MODERATE 903C>G Cys301Trp
M0055859 NCNPKCNN_00004 5772 5 Skin 0.22 protein_coding missense_variant MODERATE 875A>G Asp292Gly
M0055860 NCNPKCNN_00004 5777 5 Skin 0.22 protein_coding synonymous_variant LOW 870C>G Ala290Ala
M0055861 NCNPKCNN_00004 5849 8 Skin 0.35 protein_coding synonymous_variant LOW 798G>C Ala266Ala
M0055862 NCNPKCNN_00004 6095 8 Skin 0.35 protein_coding synonymous_variant LOW 552G>C Thr184Thr
M0055863 NCNPKCNN_00004 6164 3 Skin 0.13 protein_coding synonymous_variant LOW 483C>T Arg161Arg
M0055864 NCNPKCNN_00004 6421 7 Skin 0.30 protein_coding missense_variant MODERATE 226C>T Pro76Ser
M0055865 NCNPKCNN_00004 6429 7 Skin 0.30 protein_coding missense_variant MODERATE 218T>C Val73Ala
M0055866 NCNPKCNN_00004 6466 5 Skin 0.22 protein_coding missense_variant MODERATE 181G>A Ala61Thr
M0055867 NCNPKCNN_00004 6478 4 Skin 0.17 protein_coding missense_variant MODERATE 169A>G Thr57Ala
M0055868 NCNPKCNN_00004 6585 4 Skin 0.17 protein_coding missense_variant MODERATE 62A>G Asp21Gly
M0055869 NCNPKCNN_00004 6597 3 Skin 0.13 protein_coding missense_variant MODERATE 50A>G Asp17Gly
M0055870 NCNPKCNN_00004 6601 3 Skin 0.13 protein_coding missense_variant MODERATE 46C>T Pro16Ser
M0055871 NCNPKCNN_00004 6619 4 Skin 0.17 protein_coding missense_variant MODERATE 28T>C Ser10Pro
M0055872 NCNPKCNN_00004 6628 6 Skin 0.26 protein_coding missense_variant MODERATE 19A>G Thr7Ala
M0055873 NCNPKCNN_00005 6771 3 Skin 0.13 protein_coding synonymous_variant LOW 474C>T Gly158Gly
M0055874 NCNPKCNN_00005 6846 3 Skin 0.13 protein_coding synonymous_variant LOW 399C>G Ala133Ala
M0055875 NCNPKCNN_00005 6898 7 Skin 0.30 protein_coding missense_variant MODERATE 347G>A Gly116Glu
M0055876 NCNPKCNN_00005 7075 10 Skin 0.43 protein_coding missense_variant MODERATE 170T>C Ile57Thr
M0055877 NCNPKCNN_00005 7088 3 Skin 0.13 protein_coding missense_variant MODERATE 157T>C Ser53Pro
M0055878 NCNPKCNN_00005 7106 10 Skin 0.43 protein_coding missense_variant MODERATE 139T>C Ser47Pro
M0055879 NCNPKCNN_00005 7148 8 Skin 0.35 protein_coding missense_variant MODERATE 97T>G Ser33Ala
M0055880 NCNPKCNN_00002 7265 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4352A>C None
M0055881 NCNPKCNN_00002 7291 11 Skin 0.48 protein_coding upstream_gene_variant MODIFIER -4378G>C None
M0055882 NCNPKCNN_00002 7323 8 Skin 0.35 protein_coding upstream_gene_variant MODIFIER -4410C>G None
M0055883 NCNPKCNN_00002 7342 11 Skin 0.48 protein_coding upstream_gene_variant MODIFIER -4429C>T None
M0055884 NCNPKCNN_00006 7377 5 Skin 0.22 protein_coding synonymous_variant LOW 615G>A Ala205Ala
M0055885 NCNPKCNN_00006 7410 7 Skin 0.30 protein_coding synonymous_variant LOW 582C>G Val194Val
M0055886 NCNPKCNN_00006 7472 3 Skin 0.13 protein_coding missense_variant MODERATE 520T>A Ser174Thr
M0055887 NCNPKCNN_00006 7563 11 Skin 0.48 protein_coding synonymous_variant LOW 429G>C Pro143Pro
M0055888 NCNPKCNN_00006 7632 3 Skin 0.13 protein_coding synonymous_variant LOW 360A>G Gly120Gly
M0055889 NCNPKCNN_00006 7683 4 Skin 0.17 protein_coding synonymous_variant LOW 309C>G Gly103Gly
M0055890 NCNPKCNN_00006 7712 6 Skin 0.26 protein_coding missense_variant MODERATE 280T>C Ser94Pro
M0055891 NCNPKCNN_00006 7746 9 Skin 0.39 protein_coding synonymous_variant LOW 246T>C Asn82Asn
M0055892 NCNPKCNN_00006 7772 9 Skin 0.39 protein_coding missense_variant MODERATE 220G>C Val74Leu
M0055893 NCNPKCNN_00006 7794 13 Skin 0.57 protein_coding synonymous_variant LOW 198T>C Asp66Asp
M0055894 NCNPKCNN_00006 7809 5 Skin 0.22 protein_coding synonymous_variant LOW 183T>C Ser61Ser
M0055895 NCNPKCNN_00006 7821 3 Skin 0.13 protein_coding synonymous_variant LOW 171A>G Ser57Ser
M0055896 NCNPKCNN_00006 7846 4 Skin 0.17 protein_coding missense_variant MODERATE 146C>T Ala49Val
M0055897 NCNPKCNN_00006 7945 6 Skin 0.26 protein_coding missense_variant MODERATE 47T>C Val16Ala
M0055898 NCNPKCNN_00006 7986 11 Skin 0.48 protein_coding synonymous_variant LOW 6C>T His2His
M0055899 NCNPKCNN_00007 8178 3 Skin 0.13 protein_coding missense_variant MODERATE 620T>C Val207Ala
M0055900 NCNPKCNN_00007 8237 11 Skin 0.48 protein_coding synonymous_variant LOW 561A>G Pro187Pro
M0055901 NCNPKCNN_00007 8243 13 Skin 0.57 protein_coding synonymous_variant LOW 555T>C Cys185Cys
M0055902 NCNPKCNN_00007 8250 6 Skin 0.26 protein_coding missense_variant MODERATE 548C>T Ala183Val
M0055903 NCNPKCNN_00007 8286 3 Skin 0.13 protein_coding missense_variant MODERATE 512C>T Ala171Val
M0055904 NCNPKCNN_00007 8371 3 Skin 0.13 protein_coding missense_variant MODERATE 427G>A Ala143Thr
M0055905 NCNPKCNN_00007 8378 12 Skin 0.52 protein_coding synonymous_variant LOW 420T>C Ser140Ser
M0055906 NCNPKCNN_00007 8423 11 Skin 0.48 protein_coding synonymous_variant LOW 375C>T Arg125Arg
M0055907 NCNPKCNN_00007 8465 12 Skin 0.52 protein_coding synonymous_variant LOW 333A>G Ala111Ala
M0055908 NCNPKCNN_00007 8503 3 Skin 0.13 protein_coding missense_variant MODERATE 295G>A Val99Met
M0055909 NCNPKCNN_00007 8615 13 Skin 0.57 protein_coding synonymous_variant LOW 183C>G Val61Val
M0055910 NCNPKCNN_00007 8639 5 Skin 0.22 protein_coding synonymous_variant LOW 159C>T Gly53Gly
M0055911 NCNPKCNN_00007 8742 8 Skin 0.35 protein_coding missense_variant MODERATE 56G>C Arg19Pro
M0055912 NCNPKCNN_00007 8758 13 Skin 0.57 protein_coding missense_variant MODERATE 40A>G Ser14Gly
M0055913 NCNPKCNN_00007 8771 12 Skin 0.52 protein_coding synonymous_variant LOW 27C>G Pro9Pro
M0055914 NCNPKCNN_00003 8925 5 Skin 0.22 protein_coding upstream_gene_variant MODIFIER -3764A>G None
M0055915 NCNPKCNN_00003 8934 4 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3773C>T None
M0055916 NCNPKCNN_00003 8940 12 Skin 0.52 protein_coding upstream_gene_variant MODIFIER -3779G>C None
M0055917 NCNPKCNN_00003 8942 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3781C>T None
M0055918 NCNPKCNN_00003 9309 6 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -4148A>G None
M0055919 NCNPKCNN_00003 9365 6 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -4204A>G None
M0055920 NCNPKCNN_00003 9369 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4208G>A None
M0055921 NCNPKCNN_00003 9376 4 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -4215C>G None
M0055922 NCNPKCNN_00003 9384 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4223T>C None
M0055923 NCNPKCNN_00003 9404 12 Skin 0.52 protein_coding upstream_gene_variant MODIFIER -4243A>G None
M0055924 NCNPKCNN_00003 9411 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4250G>C None
M0055925 NCNPKCNN_00004 10637 6 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3991C>G None
M0055926 NCNPKCNN_00004 10643 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3997G>A None
M0055927 NCNPKCNN_00012 10683 5 Skin 0.22 protein_coding missense_variant MODERATE 363G>C Leu121Phe
M0055928 NCNPKCNN_00012 10743 10 Skin 0.43 protein_coding synonymous_variant LOW 303T>C Pro101Pro
M0055929 NCNPKCNN_00012 10793 3 Skin 0.13 protein_coding missense_variant MODERATE 253G>C Val85Leu
M0055930 NCNPKCNN_00012 10803 5 Skin 0.22 protein_coding synonymous_variant LOW 243G>C Ala81Ala
M0055931 NCNPKCNN_00012 10804 5 Skin 0.22 protein_coding missense_variant MODERATE 242C>G Ala81Gly
M0055932 NCNPKCNN_00012 10814 5 Skin 0.22 protein_coding missense_variant MODERATE 232C>T Leu78Phe
M0055933 NCNPKCNN_00012 10820 5 Skin 0.22 protein_coding missense_variant MODERATE 226A>G Ile76Val
M0055934 NCNPKCNN_00012 10821 5 Skin 0.22 protein_coding synonymous_variant LOW 225T>C Arg75Arg
M0055935 NCNPKCNN_00012 10826 5 Skin 0.22 protein_coding missense_variant MODERATE 220T>C Phe74Leu
M0055936 NCNPKCNN_00012 10828 5 Skin 0.22 protein_coding missense_variant MODERATE 218A>G Asp73Gly
M0055937 NCNPKCNN_00012 10883 7 Skin 0.30 protein_coding missense_variant MODERATE 163T>G Ser55Ala
M0055938 NCNPKCNN_00012 10893 4 Skin 0.17 protein_coding synonymous_variant LOW 153C>G Ala51Ala
M0055939 NCNPKCNN_00012 10896 4 Skin 0.17 protein_coding synonymous_variant LOW 150G>A Gly50Gly
M0055940 NCNPKCNN_00012 10956 6 Skin 0.26 protein_coding synonymous_variant LOW 90C>T His30His
M0055941 NCNPKCNN_00012 10969 7 Skin 0.30 protein_coding missense_variant MODERATE 77T>C Val26Ala
M0055942 NCNPKCNN_00005 6933 5 Skin 0.22 protein_coding synonymous_variant LOW 312T>C Gly104Gly
M0055943 NCNPKCNN_00007 8212 5 Skin 0.22 protein_coding missense_variant MODERATE 586A>C Thr196Pro
M0055944 NCNPKCNN_00007 8462 5 Skin 0.22 protein_coding synonymous_variant LOW 336G>T Pro112Pro
M0055945 NCNPKCNN_00007 8477 3 Skin 0.13 protein_coding synonymous_variant LOW 321C>G Gly107Gly
M0055946 NCNPKCNN_00007 8723 5 Skin 0.22 protein_coding synonymous_variant LOW 75G>A Gly25Gly
M0055947 NCNPKCNN_00007 8746 5 Skin 0.22 protein_coding missense_variant MODERATE 52G>C Ala18Pro
M0055948 NCNPKCNN_00003 8815 6 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3654C>G None
M0055949 NCNPKCNN_00003 8869 6 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3708C>T None
M0055950 NCNPKCNN_00011 10035 3 Skin 0.13 protein_coding synonymous_variant LOW 144C>G Thr48Thr
M0055951 NCNPKCNN_00012 10722 4 Skin 0.17 protein_coding synonymous_variant LOW 324C>T Arg108Arg
M0055952 NCNPKCNN_00002 2497 9 Skin 0.39 protein_coding synonymous_variant LOW 417G>T Ser139Ser
M0055953 NCNPKCNN_00002 2566 3 Skin 0.13 protein_coding synonymous_variant LOW 348C>T Arg116Arg
M0055954 NCNPKCNN_00002 2608 8 Skin 0.35 protein_coding synonymous_variant LOW 306A>G Ala102Ala
M0055955 NCNPKCNN_00002 2667 5 Skin 0.22 protein_coding missense_variant MODERATE 247G>C Glu83Gln
M0055956 NCNPKCNN_00002 2686 9 Skin 0.39 protein_coding synonymous_variant LOW 228C>T Arg76Arg
M0055957 NCNPKCNN_00002 2792 6 Skin 0.26 protein_coding missense_variant MODERATE 122A>G Asn41Ser
M0055958 NCNPKCNN_00002 2793 6 Skin 0.26 protein_coding missense_variant MODERATE 121A>G Asn41Asp
M0055959 NCNPKCNN_00002 2804 8 Skin 0.35 protein_coding missense_variant MODERATE 110C>G Ala37Gly
M0055960 NCNPKCNN_00002 2806 9 Skin 0.39 protein_coding synonymous_variant LOW 108T>C Cys36Cys
M0055961 NCNPKCNN_00002 2846 5 Skin 0.22 protein_coding missense_variant MODERATE 68T>C Val23Ala
M0055962 NCNPKCNN_00003 2952 4 Skin 0.17 protein_coding missense_variant MODERATE 2210T>C Val737Ala
M0055963 NCNPKCNN_00003 4921 6 Skin 0.26 protein_coding missense_variant MODERATE 241C>G Leu81Val
M0055964 NCNPKCNN_00001 95 3 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *128T>A None
M0055965 NCNPKCNN_00001 115 3 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *108A>T None
M0055966 NCNPKCNN_00001 143 3 Skin 0.13 protein_coding downstream_gene_variant MODIFIER *80G>A None
M0055967 NCNPKCNN_00001 528 3 Skin 0.13 protein_coding missense_variant MODERATE 1066A>G Ser356Gly
M0055968 NCNPKCNN_00001 774 4 Skin 0.17 protein_coding missense_variant MODERATE 820C>G Arg274Gly
M0055969 NCNPKCNN_00001 1234 4 Skin 0.17 protein_coding synonymous_variant LOW 360G>A Gly120Gly
M0055970 NCNPKCNN_00001 1365 4 Skin 0.17 protein_coding missense_variant MODERATE 229C>G Pro77Ala
M0055971 NCNPKCNN_00001 1744 5 Skin 0.22 protein_coding upstream_gene_variant MODIFIER -151A>G None
M0055972 NCNPKCNN_00001 1896 5 Skin 0.22 protein_coding upstream_gene_variant MODIFIER -303G>C None
M0055973 NCNPKCNN_00001 1966 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -373G>A None
M0055974 NCNPKCNN_00001 1978 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -385C>T None
M0055975 NCNPKCNN_00001 1985 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -392A>G None
M0055976 NCNPKCNN_00002 2068 6 Skin 0.26 protein_coding synonymous_variant LOW 846A>C Ala282Ala
M0055977 NCNPKCNN_00002 2131 4 Skin 0.17 protein_coding synonymous_variant LOW 783A>G Arg261Arg
M0055978 NCNPKCNN_00002 2220 5 Skin 0.22 protein_coding missense_variant MODERATE 694C>G Leu232Val
M0055979 NCNPKCNN_00002 2251 5 Skin 0.22 protein_coding synonymous_variant LOW 663C>G Pro221Pro
M0055980 NCNPKCNN_00002 2254 5 Skin 0.22 protein_coding synonymous_variant LOW 660C>G Thr220Thr
M0055981 NCNPKCNN_00002 2480 5 Skin 0.22 protein_coding missense_variant MODERATE 434G>A Gly145Glu
M0055982 NCNPKCNN_00002 2750 5 Skin 0.22 protein_coding missense_variant MODERATE 164A>G Asp55Gly
M0055983 NCNPKCNN_00003 3740 3 Skin 0.13 protein_coding synonymous_variant LOW 1422G>T Val474Val
M0055984 NCNPKCNN_00003 5033 6 Skin 0.26 protein_coding synonymous_variant LOW 129C>G Ala43Ala
M0055985 NCNPKCNN_00001 5182 8 Skin 0.35 protein_coding upstream_gene_variant MODIFIER -3589C>T None
M0055986 NCNPKCNN_00004 5704 3 Skin 0.13 protein_coding missense_variant MODERATE 943G>C Ala315Pro
M0055987 NCNPKCNN_00004 5762 3 Skin 0.13 protein_coding synonymous_variant LOW 885C>T His295His
M0055988 NCNPKCNN_00006 7505 3 Skin 0.13 protein_coding missense_variant MODERATE 487G>A Ala163Thr
M0055989 NCNPKCNN_00007 8380 8 Skin 0.35 protein_coding missense_variant MODERATE 418A>G Ser140Gly
M0055990 NCNPKCNN_00007 8399 5 Skin 0.22 protein_coding synonymous_variant LOW 399G>A Ala133Ala
M0055991 NCNPKCNN_00007 8622 3 Skin 0.13 protein_coding missense_variant MODERATE 176T>C Val59Ala
M0055992 NCNPKCNN_00003 8829 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3668T>A None
M0055993 NCNPKCNN_00003 8844 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3683A>G None
M0055994 NCNPKCNN_00003 8901 6 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3740T>C None
M0055995 NCNPKCNN_00003 8938 8 Skin 0.35 protein_coding upstream_gene_variant MODIFIER -3777C>G None
M0055996 NCNPKCNN_00009 9529 3 Skin 0.13 protein_coding synonymous_variant LOW 243C>T Arg81Arg
M0055997 NCNPKCNN_00004 10628 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3982G>T None
M0055998 NCNPKCNN_00012 11043 3 Skin 0.13 protein_coding synonymous_variant LOW 3G>A Val1Val
M0055999 NCNPKCNN_00003 2982 4 Skin 0.17 protein_coding missense_variant MODERATE 2180T>C Val727Ala
M0056000 NCNPKCNN_00003 4313 3 Skin 0.13 protein_coding synonymous_variant LOW 849C>T Gly283Gly
M0056001 NCNPKCNN_00003 4361 3 Skin 0.13 protein_coding synonymous_variant LOW 801G>C Val267Val
M0056002 NCNPKCNN_00006 7893 3 Skin 0.13 protein_coding synonymous_variant LOW 99C>T Ala33Ala
M0056003 NCNPKCNN_00006 7905 3 Skin 0.13 protein_coding synonymous_variant LOW 87C>T Ala29Ala
M0056004 NCNPKCNN_00007 8233 3 Skin 0.13 protein_coding missense_variant MODERATE 565G>A Ala189Thr
M0056005 NCNPKCNN_00012 10911 3 Skin 0.13 protein_coding synonymous_variant LOW 135C>G Pro45Pro
M0056006 NCNPKCNN_00001 1337 3 Skin 0.13 protein_coding missense_variant MODERATE 257T>A Leu86His
M0056007 NCNPKCNN_00004 5342 5 Skin 0.22 protein_coding synonymous_variant LOW 1305C>G Ala435Ala
M0056008 NCNPKCNN_00006 7947 3 Skin 0.13 protein_coding synonymous_variant LOW 45C>A Ala15Ala
M0056009 NCNPKCNN_00012 10707 4 Skin 0.17 protein_coding synonymous_variant LOW 339T>C Gly113Gly
M0056010 NCNPKCNN_00007 8231 3 Skin 0.13 protein_coding synonymous_variant LOW 567C>A Ala189Ala
M0056011 NCNPKCNN_00003 8814 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3653A>C None
M0056012 NCNPKCNN_00003 8826 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3665A>G None
M0056013 NCNPKCNN_00003 8919 3 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3758T>C None
M0056014 NCNPKCNN_00003 8948 4 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3787C>T None
M0056015 NCNPKCNN_00003 3299 5 Skin 0.22 protein_coding synonymous_variant LOW 1863G>C Leu621Leu
M0056016 NCNPKCNN_00003 5056 3 Skin 0.13 protein_coding missense_variant MODERATE 106G>A Val36Met






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term