Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C32
  Reference Plasmid   AP017383.1
  Reference Plasmid Size   62260
  Reference Plasmid GC Content   0.42
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0057193 JEBKDPKI_00029 22419 5 Skin 0.06 protein_coding missense_variant MODERATE 166T>C Tyr56His
M0057194 JEBKDPKI_00027 22621 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1946C>A None
M0057195 JEBKDPKI_00030 23459 5 Skin 0.06 protein_coding synonymous_variant LOW 1450C>T Leu484Leu
M0057196 JEBKDPKI_00030 23486 3 Skin 0.03 protein_coding missense_variant MODERATE 1423G>A Glu475Lys
M0057197 JEBKDPKI_00030 23719 5 Skin 0.06 protein_coding missense_variant MODERATE 1190C>A Pro397Gln
M0057198 JEBKDPKI_00030 24159 3 Skin 0.03 protein_coding missense_variant MODERATE 750G>T Met250Ile
M0057199 JEBKDPKI_00030 24353 5 Skin 0.06 protein_coding missense_variant MODERATE 556G>A Ala186Thr
M0057200 JEBKDPKI_00030 24413 3 Skin 0.03 protein_coding missense_variant MODERATE 496A>G Asn166Asp
M0057201 JEBKDPKI_00027 25071 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4396T>A None
M0057202 JEBKDPKI_00038 37896 7 Skin 0.08 protein_coding synonymous_variant LOW 288G>T Ala96Ala
M0057203 JEBKDPKI_00039 38725 12 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -11A>G None
M0057204 JEBKDPKI_00035 31055 10 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -110T>C None
M0057205 JEBKDPKI_00035 31209 7 Skin 0.08 protein_coding synonymous_variant LOW 45T>C Arg15Arg
M0057206 JEBKDPKI_00035 31239 7 Skin 0.08 protein_coding synonymous_variant LOW 75T>C Thr25Thr
M0057207 JEBKDPKI_00035 31583 10 Skin 0.11 protein_coding missense_variant MODERATE 419G>A Ser140Asn
M0057208 JEBKDPKI_00035 31749 9 Skin 0.10 protein_coding synonymous_variant LOW 585C>T Asp195Asp
M0057209 JEBKDPKI_00035 32109 10 Skin 0.11 protein_coding missense_variant MODERATE 945C>G Ile315Met
M0057210 JEBKDPKI_00035 32220 11 Skin 0.13 protein_coding synonymous_variant LOW 1056G>T Val352Val
M0057211 JEBKDPKI_00035 32733 11 Skin 0.13 protein_coding synonymous_variant LOW 1569C>T Gly523Gly
M0057212 JEBKDPKI_00035 32931 11 Skin 0.13 protein_coding synonymous_variant LOW 1767T>C Gly589Gly
M0057213 JEBKDPKI_00035 32958 10 Skin 0.11 protein_coding synonymous_variant LOW 1794T>C Ser598Ser
M0057214 JEBKDPKI_00035 34097 7 Skin 0.08 protein_coding missense_variant MODERATE 2933G>A Arg978His
M0057215 JEBKDPKI_00035 34409 4 Skin 0.05 protein_coding missense_variant MODERATE 3245A>T Tyr1082Phe
M0057216 JEBKDPKI_00036 34877 8 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -281C>A None
M0057217 JEBKDPKI_00036 34900 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -258C>G None
M0057218 JEBKDPKI_00036 35244 8 Skin 0.09 protein_coding synonymous_variant LOW 87C>T Val29Val
M0057219 JEBKDPKI_00036 35442 6 Skin 0.07 protein_coding synonymous_variant LOW 285A>G Pro95Pro
M0057220 JEBKDPKI_00036 35928 10 Skin 0.11 protein_coding synonymous_variant LOW 771A>G Val257Val
M0057221 JEBKDPKI_00036 36642 6 Skin 0.07 protein_coding synonymous_variant LOW 1485T>C Asn495Asn
M0057222 JEBKDPKI_00036 36692 8 Skin 0.09 protein_coding missense_variant MODERATE 1535A>G Asn512Ser
M0057223 JEBKDPKI_00037 36754 9 Skin 0.10 protein_coding missense_variant MODERATE 57C>G His19Gln
M0057224 JEBKDPKI_00037 36766 10 Skin 0.11 protein_coding synonymous_variant LOW 69C>T His23His
M0057225 JEBKDPKI_00037 36867 10 Skin 0.11 protein_coding missense_variant MODERATE 170T>A Ile57Asn
M0057226 JEBKDPKI_00037 37211 7 Skin 0.08 protein_coding missense_variant MODERATE 514A>G Thr172Ala
M0057227 JEBKDPKI_00038 38277 4 Skin 0.05 protein_coding synonymous_variant LOW 669G>A Ala223Ala
M0057228 JEBKDPKI_00038 38290 3 Skin 0.03 protein_coding missense_variant MODERATE 682C>T Leu228Phe
M0057229 JEBKDPKI_00038 38292 3 Skin 0.03 protein_coding synonymous_variant LOW 684T>G Leu228Leu
M0057230 JEBKDPKI_00038 38301 4 Skin 0.05 protein_coding synonymous_variant LOW 693C>T Arg231Arg
M0057231 JEBKDPKI_00038 38313 4 Skin 0.05 protein_coding synonymous_variant LOW 705C>G Val235Val
M0057232 JEBKDPKI_00038 38323 4 Skin 0.05 protein_coding missense_variant MODERATE 715A>T Thr239Ser
M0057233 JEBKDPKI_00039 38374 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -362T>C None
M0057234 JEBKDPKI_00039 38418 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -318T>C None
M0057235 JEBKDPKI_00039 38591 8 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -145T>C None
M0057236 JEBKDPKI_00039 38642 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -94T>G None
M0057237 JEBKDPKI_00039 38651 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -85T>C None
M0057238 JEBKDPKI_00052 50421 10 Skin 0.11 protein_coding missense_variant MODERATE 77G>A Gly26Asp
M0057239 JEBKDPKI_00052 50486 12 Skin 0.14 protein_coding synonymous_variant LOW 12T>C Tyr4Tyr
M0057240 JEBKDPKI_00053 50789 13 Skin 0.15 protein_coding synonymous_variant LOW 162A>C Arg54Arg
M0057241 JEBKDPKI_00054 50939 10 Skin 0.11 protein_coding missense_variant MODERATE 49A>G Ser17Gly
M0057242 JEBKDPKI_00054 51013 9 Skin 0.10 protein_coding synonymous_variant LOW 123G>C Ala41Ala
M0057243 JEBKDPKI_00054 51292 14 Skin 0.16 protein_coding synonymous_variant LOW 402A>G Leu134Leu
M0057244 JEBKDPKI_00051 51576 7 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1479G>A None
M0057245 JEBKDPKI_00051 51605 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1508A>G None
M0057246 JEBKDPKI_00051 51625 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1528C>T None
M0057247 JEBKDPKI_00051 51626 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1529C>A None
M0057248 JEBKDPKI_00055 51849 3 Skin 0.03 protein_coding synonymous_variant LOW 126G>A Lys42Lys
M0057249 JEBKDPKI_00031 25772 3 Skin 0.03 protein_coding synonymous_variant LOW 609A>G Val203Val
M0057250 JEBKDPKI_00047 46671 11 Skin 0.13 protein_coding missense_variant MODERATE 61G>A Ala21Thr
M0057251 JEBKDPKI_00047 46973 8 Skin 0.09 protein_coding synonymous_variant LOW 363C>T Ala121Ala
M0057252 JEBKDPKI_00049 47691 9 Skin 0.10 protein_coding synonymous_variant LOW 240C>T Ile80Ile
M0057253 JEBKDPKI_00049 47721 9 Skin 0.10 protein_coding synonymous_variant LOW 270T>C Ala90Ala
M0057254 JEBKDPKI_00050 48657 6 Skin 0.07 protein_coding synonymous_variant LOW 696G>A Val232Val
M0057255 JEBKDPKI_00050 48685 9 Skin 0.10 protein_coding missense_variant MODERATE 724C>T Leu242Phe
M0057256 JEBKDPKI_00051 49955 3 Skin 0.03 protein_coding missense_variant MODERATE 143G>A Arg48Lys
M0057257 JEBKDPKI_00051 49962 3 Skin 0.03 protein_coding missense_variant MODERATE 136A>G Arg46Gly
M0057258 JEBKDPKI_00011 8292 3 Skin 0.03 protein_coding synonymous_variant LOW 84G>C Pro28Pro
M0057259 JEBKDPKI_00012 8727 5 Skin 0.06 protein_coding missense_variant MODERATE 244G>A Val82Ile
M0057260 JEBKDPKI_00009 9436 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2897C>A None
M0057261 JEBKDPKI_00009 9459 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2920A>G None
M0057262 JEBKDPKI_00034 30927 3 Skin 0.03 protein_coding missense_variant MODERATE 1085C>G Ala362Gly
M0057263 JEBKDPKI_00035 31029 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -136G>A None
M0057264 JEBKDPKI_00035 31371 3 Skin 0.03 protein_coding synonymous_variant LOW 207T>C Cys69Cys
M0057265 JEBKDPKI_00035 31605 6 Skin 0.07 protein_coding synonymous_variant LOW 441C>T Ala147Ala
M0057266 JEBKDPKI_00035 31731 3 Skin 0.03 protein_coding synonymous_variant LOW 567G>A Val189Val
M0057267 JEBKDPKI_00035 31783 3 Skin 0.03 protein_coding missense_variant MODERATE 619G>A Val207Ile
M0057268 JEBKDPKI_00035 31784 3 Skin 0.03 protein_coding missense_variant MODERATE 620T>C Val207Ala
M0057269 JEBKDPKI_00035 31800 3 Skin 0.03 protein_coding synonymous_variant LOW 636T>C Thr212Thr
M0057270 JEBKDPKI_00035 31803 3 Skin 0.03 protein_coding synonymous_variant LOW 639C>T Asp213Asp
M0057271 JEBKDPKI_00035 31806 3 Skin 0.03 protein_coding synonymous_variant LOW 642A>C Val214Val
M0057272 JEBKDPKI_00035 31809 3 Skin 0.03 protein_coding synonymous_variant LOW 645A>T Pro215Pro
M0057273 JEBKDPKI_00035 31813 3 Skin 0.03 protein_coding missense_variant MODERATE 649T>G Ser217Ala
M0057274 JEBKDPKI_00035 32655 7 Skin 0.08 protein_coding synonymous_variant LOW 1491T>C Arg497Arg
M0057275 JEBKDPKI_00035 32833 8 Skin 0.09 protein_coding missense_variant MODERATE 1669T>G Ser557Ala
M0057276 JEBKDPKI_00035 32929 6 Skin 0.07 protein_coding missense_variant MODERATE 1765G>A Gly589Ser
M0057277 JEBKDPKI_00035 33843 5 Skin 0.06 protein_coding synonymous_variant LOW 2679C>T Ser893Ser
M0057278 JEBKDPKI_00036 35725 6 Skin 0.07 protein_coding missense_variant MODERATE 568G>A Ala190Thr
M0057279 JEBKDPKI_00036 35967 3 Skin 0.03 protein_coding synonymous_variant LOW 810C>T Gly270Gly
M0057280 JEBKDPKI_00036 36612 3 Skin 0.03 protein_coding synonymous_variant LOW 1455C>T Asn485Asn
M0057281 JEBKDPKI_00036 36678 5 Skin 0.06 protein_coding synonymous_variant LOW 1521G>A Val507Val
M0057282 JEBKDPKI_00037 36769 3 Skin 0.03 protein_coding missense_variant MODERATE 72T>G Asp24Glu
M0057283 JEBKDPKI_00037 37012 4 Skin 0.05 protein_coding synonymous_variant LOW 315C>T His105His
M0057284 JEBKDPKI_00039 38982 3 Skin 0.03 protein_coding missense_variant MODERATE 247A>C Ile83Leu
M0057285 JEBKDPKI_00039 39057 3 Skin 0.03 protein_coding missense_variant MODERATE 322G>A Asp108Asn
M0057286 JEBKDPKI_00039 39134 7 Skin 0.08 protein_coding synonymous_variant LOW 399T>C Tyr133Tyr
M0057287 JEBKDPKI_00018 13808 3 Skin 0.03 protein_coding missense_variant MODERATE 1517G>A Arg506His
M0057288 JEBKDPKI_00018 13809 3 Skin 0.03 protein_coding synonymous_variant LOW 1518T>C Arg506Arg
M0057289 JEBKDPKI_00018 13935 3 Skin 0.03 protein_coding synonymous_variant LOW 1644G>A Leu548Leu
M0057290 JEBKDPKI_00018 13995 3 Skin 0.03 protein_coding synonymous_variant LOW 1704A>G Val568Val
M0057291 JEBKDPKI_00016 15281 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4528C>A None
M0057292 JEBKDPKI_00064 58651 3 Skin 0.03 protein_coding missense_variant MODERATE 425C>A Pro142Gln
M0057293 JEBKDPKI_00064 58664 3 Skin 0.03 protein_coding missense_variant MODERATE 438A>G Ile146Met
M0057294 JEBKDPKI_00064 58683 3 Skin 0.03 protein_coding missense_variant MODERATE 457G>A Ala153Thr
M0057295 JEBKDPKI_00065 59198 3 Skin 0.03 protein_coding synonymous_variant LOW 21A>G Lys7Lys
M0057296 JEBKDPKI_00065 59209 3 Skin 0.03 protein_coding missense_variant MODERATE 10T>C Tyr4His
M0057297 JEBKDPKI_00062 59602 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2192T>A None
M0057298 JEBKDPKI_00067 59846 3 Skin 0.03 protein_coding synonymous_variant LOW 162T>C Leu54Leu
M0057299 JEBKDPKI_00067 59847 3 Skin 0.03 protein_coding missense_variant MODERATE 163G>A Asp55Asn
M0057300 JEBKDPKI_00067 59849 3 Skin 0.03 protein_coding synonymous_variant LOW 165T>C Asp55Asp
M0057301 JEBKDPKI_00067 59852 3 Skin 0.03 protein_coding synonymous_variant LOW 168C>T Cys56Cys
M0057302 JEBKDPKI_00067 59853 3 Skin 0.03 protein_coding missense_variant MODERATE 169A>G Ser57Gly
M0057303 JEBKDPKI_00067 59854 3 Skin 0.03 protein_coding missense_variant MODERATE 170G>C Ser57Thr
M0057304 JEBKDPKI_00067 59855 3 Skin 0.03 protein_coding missense_variant MODERATE 171C>A Ser57Arg
M0057305 JEBKDPKI_00067 59867 3 Skin 0.03 protein_coding synonymous_variant LOW 183G>A Leu61Leu
M0057306 JEBKDPKI_00062 59957 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2547T>G None
M0057307 JEBKDPKI_00049 47871 5 Skin 0.06 protein_coding synonymous_variant LOW 420G>A Ala140Ala
M0057308 JEBKDPKI_00050 47991 9 Skin 0.10 protein_coding synonymous_variant LOW 30T>C Phe10Phe
M0057309 JEBKDPKI_00050 48060 9 Skin 0.10 protein_coding synonymous_variant LOW 99C>A Gly33Gly
M0057310 JEBKDPKI_00050 48199 5 Skin 0.06 protein_coding missense_variant MODERATE 238G>A Val80Ile
M0057311 JEBKDPKI_00050 48241 4 Skin 0.05 protein_coding missense_variant MODERATE 280T>C Tyr94His
M0057312 JEBKDPKI_00050 48345 4 Skin 0.05 protein_coding synonymous_variant LOW 384A>G Ser128Ser
M0057313 JEBKDPKI_00050 48346 7 Skin 0.08 protein_coding missense_variant MODERATE 385A>C Lys129Gln
M0057314 JEBKDPKI_00050 48349 4 Skin 0.05 protein_coding missense_variant MODERATE 388T>G Trp130Gly
M0057315 JEBKDPKI_00050 48435 11 Skin 0.13 protein_coding synonymous_variant LOW 474A>G Leu158Leu
M0057316 JEBKDPKI_00050 48464 4 Skin 0.05 protein_coding missense_variant MODERATE 503T>C Val168Ala
M0057317 JEBKDPKI_00050 48507 5 Skin 0.06 protein_coding missense_variant MODERATE 546G>A Met182Ile
M0057318 JEBKDPKI_00050 48551 8 Skin 0.09 protein_coding missense_variant MODERATE 590T>A Phe197Tyr
M0057319 JEBKDPKI_00050 48603 11 Skin 0.13 protein_coding synonymous_variant LOW 642C>G Ala214Ala
M0057320 JEBKDPKI_00053 48752 8 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1876G>C None
M0057321 JEBKDPKI_00053 48779 7 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1849T>C None
M0057322 JEBKDPKI_00054 51424 6 Skin 0.07 protein_coding synonymous_variant LOW 534C>A Ala178Ala
M0057323 JEBKDPKI_00051 51633 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1536C>T None
M0057324 JEBKDPKI_00018 12822 3 Skin 0.03 protein_coding synonymous_variant LOW 531C>A Ala177Ala
M0057325 JEBKDPKI_00019 15169 3 Skin 0.03 protein_coding synonymous_variant LOW 240G>A Ala80Ala
M0057326 JEBKDPKI_00019 15178 3 Skin 0.03 protein_coding synonymous_variant LOW 249A>G Lys83Lys
M0057327 JEBKDPKI_00019 15182 3 Skin 0.03 protein_coding missense_variant MODERATE 253A>C Ile85Leu
M0057328 JEBKDPKI_00019 15195 3 Skin 0.03 protein_coding missense_variant MODERATE 266A>G Gln89Arg
M0057329 JEBKDPKI_00048 47087 4 Skin 0.05 protein_coding missense_variant MODERATE 8C>T Thr3Met
M0057330 JEBKDPKI_00048 47325 7 Skin 0.08 protein_coding synonymous_variant LOW 246T>G Gly82Gly
M0057331 JEBKDPKI_00042 47365 7 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4143A>G None
M0057332 JEBKDPKI_00042 47374 7 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4152T>C None
M0057333 JEBKDPKI_00049 47521 6 Skin 0.07 protein_coding missense_variant MODERATE 70G>C Glu24Gln
M0057334 JEBKDPKI_00050 48243 4 Skin 0.05 protein_coding synonymous_variant LOW 282C>T Tyr94Tyr
M0057335 JEBKDPKI_00050 48708 6 Skin 0.07 protein_coding synonymous_variant LOW 747G>A Ala249Ala
M0057336 JEBKDPKI_00053 48835 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1793C>T None
M0057337 JEBKDPKI_00053 48838 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1790C>A None
M0057338 JEBKDPKI_00053 48840 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1788C>T None
M0057339 JEBKDPKI_00053 48841 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1787G>T None
M0057340 JEBKDPKI_00053 48876 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1752T>C None
M0057341 JEBKDPKI_00053 48882 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1746A>G None
M0057342 JEBKDPKI_00053 48898 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1730C>A None
M0057343 JEBKDPKI_00010 12258 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4109T>C None
M0057344 JEBKDPKI_00010 12268 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4119A>G None
M0057345 JEBKDPKI_00043 43810 7 Skin 0.08 protein_coding synonymous_variant LOW 348C>T Tyr116Tyr
M0057346 JEBKDPKI_00043 43950 4 Skin 0.05 protein_coding missense_variant MODERATE 488C>G Thr163Arg
M0057347 JEBKDPKI_00043 43984 7 Skin 0.08 protein_coding synonymous_variant LOW 522T>C Ile174Ile
M0057348 JEBKDPKI_00043 44168 8 Skin 0.09 protein_coding missense_variant MODERATE 706T>G Leu236Val
M0057349 JEBKDPKI_00043 44213 7 Skin 0.08 protein_coding missense_variant MODERATE 751C>T Arg251Cys
M0057350 JEBKDPKI_00043 44224 8 Skin 0.09 protein_coding missense_variant MODERATE 762G>T Glu254Asp
M0057351 JEBKDPKI_00043 44377 8 Skin 0.09 protein_coding synonymous_variant LOW 915A>G Val305Val
M0057352 JEBKDPKI_00043 44380 7 Skin 0.08 protein_coding synonymous_variant LOW 918G>T Thr306Thr
M0057353 JEBKDPKI_00042 44521 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1299G>T None
M0057354 JEBKDPKI_00042 44554 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1332G>A None
M0057355 JEBKDPKI_00042 44569 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1347T>C None
M0057356 JEBKDPKI_00042 44585 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1363A>G None
M0057357 JEBKDPKI_00042 44599 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1377G>A None
M0057358 JEBKDPKI_00042 44622 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1400A>T None
M0057359 JEBKDPKI_00042 44627 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1405T>C None
M0057360 JEBKDPKI_00044 44658 4 Skin 0.05 protein_coding synonymous_variant LOW 6A>C Pro2Pro
M0057361 JEBKDPKI_00044 44865 5 Skin 0.06 protein_coding synonymous_variant LOW 213T>C Ser71Ser
M0057362 JEBKDPKI_00042 45383 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2161T>G None
M0057363 JEBKDPKI_00045 45552 9 Skin 0.10 protein_coding missense_variant MODERATE 119T>C Val40Ala
M0057364 JEBKDPKI_00045 45598 5 Skin 0.06 protein_coding synonymous_variant LOW 165C>T Tyr55Tyr
M0057365 JEBKDPKI_00045 45680 6 Skin 0.07 protein_coding missense_variant MODERATE 247G>A Val83Ile
M0057366 JEBKDPKI_00045 45691 6 Skin 0.07 protein_coding synonymous_variant LOW 258T>C Ser86Ser
M0057367 JEBKDPKI_00045 45934 9 Skin 0.10 protein_coding synonymous_variant LOW 501C>T His167His
M0057368 JEBKDPKI_00045 45946 9 Skin 0.10 protein_coding synonymous_variant LOW 513T>C Val171Val
M0057369 JEBKDPKI_00045 45949 9 Skin 0.10 protein_coding synonymous_variant LOW 516T>C Asn172Asn
M0057370 JEBKDPKI_00045 45955 9 Skin 0.10 protein_coding synonymous_variant LOW 522T>A Thr174Thr
M0057371 JEBKDPKI_00046 45965 4 Skin 0.05 protein_coding synonymous_variant LOW 9T>C Asp3Asp
M0057372 JEBKDPKI_00046 45966 4 Skin 0.05 protein_coding synonymous_variant LOW 10T>C Leu4Leu
M0057373 JEBKDPKI_00046 45968 4 Skin 0.05 protein_coding synonymous_variant LOW 12G>A Leu4Leu
M0057374 JEBKDPKI_00046 45974 4 Skin 0.05 protein_coding synonymous_variant LOW 18A>T Gly6Gly
M0057375 JEBKDPKI_00046 45995 3 Skin 0.03 protein_coding synonymous_variant LOW 39C>T Gly13Gly
M0057376 JEBKDPKI_00046 46056 9 Skin 0.10 protein_coding synonymous_variant LOW 100T>C Leu34Leu
M0057377 JEBKDPKI_00046 46190 8 Skin 0.09 protein_coding synonymous_variant LOW 234G>A Val78Val
M0057378 JEBKDPKI_00046 46377 9 Skin 0.10 protein_coding stop_lost&splice_region_variant HIGH 421T>G Ter141Gluext*?
M0057379 JEBKDPKI_00047 46899 3 Skin 0.03 protein_coding missense_variant MODERATE 289C>G His97Asp
M0057380 JEBKDPKI_00047 46916 3 Skin 0.03 protein_coding synonymous_variant LOW 306G>C Val102Val
M0057381 JEBKDPKI_00047 46937 3 Skin 0.03 protein_coding synonymous_variant LOW 327T>C Thr109Thr
M0057382 JEBKDPKI_00047 46949 3 Skin 0.03 protein_coding synonymous_variant LOW 339C>G Gly113Gly
M0057383 JEBKDPKI_00047 46952 3 Skin 0.03 protein_coding synonymous_variant LOW 342A>C Val114Val
M0057384 JEBKDPKI_00047 46961 3 Skin 0.03 protein_coding synonymous_variant LOW 351G>A Glu117Glu
M0057385 JEBKDPKI_00047 46964 3 Skin 0.03 protein_coding synonymous_variant LOW 354T>C Ala118Ala
M0057386 JEBKDPKI_00047 46967 3 Skin 0.03 protein_coding synonymous_variant LOW 357A>G Leu119Leu
M0057387 JEBKDPKI_00047 47008 5 Skin 0.06 protein_coding missense_variant MODERATE 398C>G Thr133Ser
M0057388 JEBKDPKI_00048 47328 3 Skin 0.03 protein_coding synonymous_variant LOW 249G>A Gly83Gly
M0057389 JEBKDPKI_00042 47351 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4129A>G None
M0057390 JEBKDPKI_00042 47352 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4130T>C None
M0057391 JEBKDPKI_00042 47385 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4163C>G None
M0057392 JEBKDPKI_00049 47495 5 Skin 0.06 protein_coding missense_variant MODERATE 44G>A Gly15Glu
M0057393 JEBKDPKI_00064 58365 3 Skin 0.03 protein_coding missense_variant MODERATE 139A>G Ile47Val
M0057394 JEBKDPKI_00062 59617 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2207C>A None
M0057395 JEBKDPKI_00062 59629 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2219T>C None
M0057396 JEBKDPKI_00062 59647 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2237C>G None
M0057397 JEBKDPKI_00020 16189 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -14T>C None
M0057398 JEBKDPKI_00050 48486 4 Skin 0.05 protein_coding synonymous_variant LOW 525G>A Ala175Ala
M0057399 JEBKDPKI_00053 48740 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1888C>A None
M0057400 JEBKDPKI_00053 48845 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1783T>G None
M0057401 JEBKDPKI_00053 48922 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1706G>A None
M0057402 JEBKDPKI_00035 34044 5 Skin 0.06 protein_coding synonymous_variant LOW 2880G>C Gly960Gly
M0057403 JEBKDPKI_00035 34692 4 Skin 0.05 protein_coding synonymous_variant LOW 3528T>C Thr1176Thr
M0057404 JEBKDPKI_00036 35024 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -134T>C None
M0057405 JEBKDPKI_00036 35226 3 Skin 0.03 protein_coding synonymous_variant LOW 69A>T Ser23Ser
M0057406 JEBKDPKI_00036 35397 4 Skin 0.05 protein_coding synonymous_variant LOW 240C>A Gly80Gly
M0057407 JEBKDPKI_00036 35751 4 Skin 0.05 protein_coding synonymous_variant LOW 594A>G Gly198Gly
M0057408 JEBKDPKI_00039 39209 12 Skin 0.14 protein_coding synonymous_variant LOW 474C>T Cys158Cys
M0057409 JEBKDPKI_00039 39446 11 Skin 0.13 protein_coding synonymous_variant LOW 711A>G Val237Val
M0057410 JEBKDPKI_00039 39527 14 Skin 0.16 protein_coding synonymous_variant LOW 792A>G Leu264Leu
M0057411 JEBKDPKI_00040 40008 9 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -239G>A None
M0057412 JEBKDPKI_00040 40084 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -163C>A None
M0057413 JEBKDPKI_00040 40114 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -133A>C None
M0057414 JEBKDPKI_00040 40123 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -124G>A None
M0057415 JEBKDPKI_00040 40360 11 Skin 0.13 protein_coding synonymous_variant LOW 114T>A Thr38Thr
M0057416 JEBKDPKI_00040 40462 5 Skin 0.06 protein_coding synonymous_variant LOW 216C>T Pro72Pro
M0057417 JEBKDPKI_00040 40621 9 Skin 0.10 protein_coding synonymous_variant LOW 375T>C Asn125Asn
M0057418 JEBKDPKI_00040 40623 9 Skin 0.10 protein_coding missense_variant MODERATE 377C>G Thr126Ser
M0057419 JEBKDPKI_00040 40675 9 Skin 0.10 protein_coding synonymous_variant LOW 429G>C Leu143Leu
M0057420 JEBKDPKI_00040 40702 10 Skin 0.11 protein_coding synonymous_variant LOW 456T>C Pro152Pro
M0057421 JEBKDPKI_00040 40709 13 Skin 0.15 protein_coding missense_variant MODERATE 463A>G Ser155Gly
M0057422 JEBKDPKI_00040 40786 7 Skin 0.08 protein_coding synonymous_variant LOW 540T>C Pro180Pro
M0057423 JEBKDPKI_00040 40900 13 Skin 0.15 protein_coding synonymous_variant LOW 654G>A Glu218Glu
M0057424 JEBKDPKI_00040 40931 4 Skin 0.05 protein_coding synonymous_variant LOW 685C>T Leu229Leu
M0057425 JEBKDPKI_00040 40954 10 Skin 0.11 protein_coding synonymous_variant LOW 708T>C Ser236Ser
M0057426 JEBKDPKI_00040 41024 14 Skin 0.16 protein_coding missense_variant MODERATE 778A>G Ser260Gly
M0057427 JEBKDPKI_00040 41176 12 Skin 0.14 protein_coding synonymous_variant LOW 930A>G Leu310Leu
M0057428 JEBKDPKI_00041 41330 13 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -150A>C None
M0057429 JEBKDPKI_00041 41425 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -55G>T None
M0057430 JEBKDPKI_00041 41700 10 Skin 0.11 protein_coding missense_variant MODERATE 221G>A Arg74His
M0057431 JEBKDPKI_00041 41758 9 Skin 0.10 protein_coding synonymous_variant LOW 279G>A Leu93Leu
M0057432 JEBKDPKI_00041 41794 9 Skin 0.10 protein_coding synonymous_variant LOW 315G>T Ala105Ala
M0057433 JEBKDPKI_00041 41795 9 Skin 0.10 protein_coding missense_variant MODERATE 316G>A Val106Ile
M0057434 JEBKDPKI_00041 42023 15 Skin 0.17 protein_coding missense_variant MODERATE 544A>G Met182Val
M0057435 JEBKDPKI_00041 42044 9 Skin 0.10 protein_coding missense_variant MODERATE 565T>G Ser189Ala
M0057436 JEBKDPKI_00041 42097 13 Skin 0.15 protein_coding synonymous_variant LOW 618T>C Gly206Gly
M0057437 JEBKDPKI_00041 42110 3 Skin 0.03 protein_coding missense_variant MODERATE 631C>G His211Asp
M0057438 JEBKDPKI_00041 42130 11 Skin 0.13 protein_coding synonymous_variant LOW 651C>T Asn217Asn
M0057439 JEBKDPKI_00041 42270 12 Skin 0.14 protein_coding missense_variant MODERATE 791G>C Ser264Thr
M0057440 JEBKDPKI_00041 42343 12 Skin 0.14 protein_coding synonymous_variant LOW 864C>T Tyr288Tyr
M0057441 JEBKDPKI_00041 42495 5 Skin 0.06 protein_coding missense_variant MODERATE 1016C>G Ala339Gly
M0057442 JEBKDPKI_00041 42508 13 Skin 0.15 protein_coding missense_variant MODERATE 1029A>G Ile343Met
M0057443 JEBKDPKI_00041 42532 4 Skin 0.05 protein_coding synonymous_variant LOW 1053G>A Leu351Leu
M0057444 JEBKDPKI_00041 42652 13 Skin 0.15 protein_coding synonymous_variant LOW 1173A>G Ser391Ser
M0057445 JEBKDPKI_00042 43092 7 Skin 0.08 protein_coding missense_variant MODERATE 131C>T Pro44Leu
M0057446 JEBKDPKI_00042 43123 7 Skin 0.08 protein_coding missense_variant MODERATE 100A>G Asn34Asp
M0057447 JEBKDPKI_00042 43257 8 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -35T>C None
M0057448 JEBKDPKI_00042 43358 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -136T>C None
M0057449 JEBKDPKI_00043 43466 3 Skin 0.03 protein_coding missense_variant MODERATE 4C>T Pro2Ser
M0057450 JEBKDPKI_00043 43467 3 Skin 0.03 protein_coding missense_variant MODERATE 5C>A Pro2His
M0057451 JEBKDPKI_00044 45287 3 Skin 0.03 protein_coding missense_variant MODERATE 635T>C Val212Ala
M0057452 JEBKDPKI_00045 45838 3 Skin 0.03 protein_coding synonymous_variant LOW 405T>C Cys135Cys
M0057453 JEBKDPKI_00047 46790 3 Skin 0.03 protein_coding synonymous_variant LOW 180C>T Thr60Thr
M0057454 JEBKDPKI_00047 46805 3 Skin 0.03 protein_coding synonymous_variant LOW 195T>G Gly65Gly
M0057455 JEBKDPKI_00035 33444 3 Skin 0.03 protein_coding synonymous_variant LOW 2280A>G Leu760Leu
M0057456 JEBKDPKI_00039 39789 9 Skin 0.10 protein_coding missense_variant MODERATE 1054T>A Phe352Ile
M0057457 JEBKDPKI_00045 45454 3 Skin 0.03 protein_coding synonymous_variant LOW 21T>C Pro7Pro
M0057458 JEBKDPKI_00028 21617 3 Skin 0.03 protein_coding synonymous_variant LOW 192A>G Leu64Leu
M0057459 JEBKDPKI_00028 21634 3 Skin 0.03 protein_coding synonymous_variant LOW 175C>T Leu59Leu
M0057460 JEBKDPKI_00028 21734 3 Skin 0.03 protein_coding synonymous_variant LOW 75G>T Arg25Arg
M0057461 JEBKDPKI_00029 22435 4 Skin 0.05 protein_coding synonymous_variant LOW 150A>G Leu50Leu
M0057462 JEBKDPKI_00029 22506 4 Skin 0.05 protein_coding missense_variant MODERATE 79A>C Ile27Leu
M0057463 JEBKDPKI_00030 23190 5 Skin 0.06 protein_coding synonymous_variant LOW 1719G>A Glu573Glu
M0057464 JEBKDPKI_00030 24323 4 Skin 0.05 protein_coding missense_variant MODERATE 586A>C Ser196Arg
M0057465 JEBKDPKI_00027 21910 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1235T>G None
M0057466 JEBKDPKI_00020 15960 3 Skin 0.03 protein_coding synonymous_variant LOW 216T>G Val72Val
M0057467 JEBKDPKI_00020 15965 3 Skin 0.03 protein_coding synonymous_variant LOW 211T>C Leu71Leu
M0057468 JEBKDPKI_00020 15972 3 Skin 0.03 protein_coding synonymous_variant LOW 204C>T Tyr68Tyr
M0057469 JEBKDPKI_00020 16311 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -136G>T None
M0057470 JEBKDPKI_00021 16362 3 Skin 0.03 protein_coding missense_variant MODERATE 548A>C Asp183Ala
M0057471 JEBKDPKI_00021 16385 3 Skin 0.03 protein_coding synonymous_variant LOW 525G>A Thr175Thr
M0057472 JEBKDPKI_00041 41389 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -91C>T None
M0057473 JEBKDPKI_00041 41449 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -31C>T None
M0057474 JEBKDPKI_00041 41551 3 Skin 0.03 protein_coding synonymous_variant LOW 72C>A Leu24Leu
M0057475 JEBKDPKI_00041 41753 8 Skin 0.09 protein_coding missense_variant MODERATE 274A>G Thr92Ala
M0057476 JEBKDPKI_00041 42073 4 Skin 0.05 protein_coding synonymous_variant LOW 594A>G Thr198Thr
M0057477 JEBKDPKI_00044 45336 5 Skin 0.06 protein_coding synonymous_variant LOW 684G>A Val228Val
M0057478 JEBKDPKI_00044 45362 5 Skin 0.06 protein_coding missense_variant MODERATE 710A>G Asp237Gly
M0057479 JEBKDPKI_00041 41719 5 Skin 0.06 protein_coding synonymous_variant LOW 240G>C Val80Val
M0057480 JEBKDPKI_00041 41880 7 Skin 0.08 protein_coding missense_variant MODERATE 401G>T Arg134Leu
M0057481 JEBKDPKI_00039 39369 3 Skin 0.03 protein_coding synonymous_variant LOW 634C>A Arg212Arg
M0057482 JEBKDPKI_00039 39386 6 Skin 0.07 protein_coding synonymous_variant LOW 651T>C Cys217Cys
M0057483 JEBKDPKI_00040 40484 10 Skin 0.11 protein_coding missense_variant MODERATE 238C>G Gln80Glu
M0057484 JEBKDPKI_00040 40937 3 Skin 0.03 protein_coding missense_variant MODERATE 691G>A Glu231Lys
M0057485 JEBKDPKI_00041 42719 3 Skin 0.03 protein_coding missense_variant MODERATE 1240A>G Thr414Ala
M0057486 JEBKDPKI_00039 39743 6 Skin 0.07 protein_coding synonymous_variant LOW 1008A>G Ala336Ala
M0057487 JEBKDPKI_00040 40571 3 Skin 0.03 protein_coding missense_variant MODERATE 325G>A Val109Ile
M0057488 JEBKDPKI_00040 40713 6 Skin 0.07 protein_coding missense_variant MODERATE 467T>A Val156Glu
M0057489 JEBKDPKI_00041 41879 3 Skin 0.03 protein_coding missense_variant MODERATE 400C>T Arg134Cys
M0057490 JEBKDPKI_00041 42764 5 Skin 0.06 protein_coding stop_gained HIGH 1285C>T Gln429*
M0057491 JEBKDPKI_00043 43789 3 Skin 0.03 protein_coding synonymous_variant LOW 327A>G Val109Val
M0057492 JEBKDPKI_00043 43855 3 Skin 0.03 protein_coding synonymous_variant LOW 393T>C Asn131Asn
M0057493 JEBKDPKI_00045 45730 4 Skin 0.05 protein_coding synonymous_variant LOW 297G>A Val99Val
M0057494 JEBKDPKI_00039 39635 6 Skin 0.07 protein_coding synonymous_variant LOW 900G>A Val300Val
M0057495 JEBKDPKI_00040 41050 3 Skin 0.03 protein_coding synonymous_variant LOW 804C>T Gly268Gly
M0057496 JEBKDPKI_00043 43549 3 Skin 0.03 protein_coding synonymous_variant LOW 87G>A Leu29Leu
M0057497 JEBKDPKI_00044 45249 3 Skin 0.03 protein_coding synonymous_variant LOW 597A>G Gln199Gln






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
JEBKDPKI_00035 PHI:10512 narG 70.1 0 5 1222 0.9894 0.9735 rodents urinary tract infection respiratory nitrate reductase 1 alpha chain reduced virulence
JEBKDPKI_00036 PHI:10513 narH 73.7 3.8e-234 1 511 0.9980 0.9941 rodents urinary tract infection respiratory nitrate reductase 1 beta chain reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
JEBKDPKI_00035 5.A.3.1.1 70.1 0 5 1222 0.9894 5.3956 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family
JEBKDPKI_00036 5.A.3.1.1 73.7 8.5e-234 1 511 0.9980 2.2622 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family