Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C38
  Reference Plasmid   AP025555.1
  Reference Plasmid Size   54827
  Reference Plasmid GC Content   0.62
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0058016 IJGONIID_00071 54241 13 Skin 0.09 protein_coding synonymous_variant LOW 486T>C Pro162Pro
M0058017 IJGONIID_00071 54456 4 Skin 0.03 protein_coding missense_variant MODERATE 271A>G Arg91Gly
M0058018 IJGONIID_00071 54473 3 Skin 0.02 protein_coding missense_variant MODERATE 254A>C Lys85Thr
M0058019 IJGONIID_00071 54474 3 Skin 0.02 protein_coding missense_variant MODERATE 253A>G Lys85Glu
M0058020 IJGONIID_00071 54485 10 Skin 0.07 protein_coding missense_variant MODERATE 242A>C Asp81Ala
M0058021 IJGONIID_00039 31654 20 Skin 0.15 protein_coding missense_variant MODERATE 124A>G Ile42Val
M0058022 IJGONIID_00001 157 3 Skin 0.02 protein_coding missense_variant MODERATE 53T>C Leu18Pro
M0058023 IJGONIID_00001 282 3 Skin 0.02 protein_coding missense_variant MODERATE 178G>A Asp60Asn
M0058024 IJGONIID_00001 348 5 Skin 0.04 protein_coding missense_variant MODERATE 244G>A Gly82Ser
M0058025 IJGONIID_00001 349 5 Skin 0.04 protein_coding missense_variant MODERATE 245G>A Gly82Asp
M0058026 IJGONIID_00001 366 6 Skin 0.04 protein_coding missense_variant MODERATE 262A>G Lys88Glu
M0058027 IJGONIID_00001 368 6 Skin 0.04 protein_coding missense_variant MODERATE 264A>C Lys88Asn
M0058028 IJGONIID_00001 369 6 Skin 0.04 protein_coding missense_variant MODERATE 265G>A Ala89Thr
M0058029 IJGONIID_00001 372 6 Skin 0.04 protein_coding missense_variant MODERATE 268G>A Ala90Thr
M0058030 IJGONIID_00001 377 6 Skin 0.04 protein_coding synonymous_variant LOW 273T>C Asn91Asn
M0058031 IJGONIID_00001 386 6 Skin 0.04 protein_coding synonymous_variant LOW 282G>A Lys94Lys
M0058032 IJGONIID_00070 53834 17 Skin 0.12 protein_coding missense_variant MODERATE 68G>A Gly23Asp
M0058033 IJGONIID_00066 54803 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3664A>G None
M0058034 IJGONIID_00021 19994 9 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4018A>G None
M0058035 IJGONIID_00021 20031 9 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4055C>A None
M0058036 IJGONIID_00021 20034 9 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4058A>G None
M0058037 IJGONIID_00028 20178 5 Skin 0.04 protein_coding missense_variant MODERATE 1243T>C Cys415Arg
M0058038 IJGONIID_00028 20226 4 Skin 0.03 protein_coding missense_variant MODERATE 1195A>C Thr399Pro
M0058039 IJGONIID_00028 20409 4 Skin 0.03 protein_coding missense_variant MODERATE 1012A>G Thr338Ala
M0058040 IJGONIID_00028 20417 8 Skin 0.06 protein_coding missense_variant MODERATE 1004C>A Ala335Asp
M0058041 IJGONIID_00028 20459 5 Skin 0.04 protein_coding missense_variant MODERATE 962A>G Asn321Ser
M0058042 IJGONIID_00028 20460 5 Skin 0.04 protein_coding missense_variant MODERATE 961A>G Asn321Asp
M0058043 IJGONIID_00028 20508 4 Skin 0.03 protein_coding missense_variant MODERATE 913C>A Pro305Thr
M0058044 IJGONIID_00028 20642 6 Skin 0.04 protein_coding missense_variant MODERATE 779C>T Ala260Val
M0058045 IJGONIID_00028 20645 6 Skin 0.04 protein_coding missense_variant MODERATE 776C>T Thr259Ile
M0058046 IJGONIID_00028 20708 6 Skin 0.04 protein_coding missense_variant MODERATE 713A>G Asn238Ser
M0058047 IJGONIID_00028 20755 6 Skin 0.04 protein_coding synonymous_variant LOW 666G>T Ala222Ala
M0058048 IJGONIID_00028 20758 6 Skin 0.04 protein_coding synonymous_variant LOW 663C>T Thr221Thr
M0058049 IJGONIID_00028 20767 6 Skin 0.04 protein_coding missense_variant MODERATE 654C>A His218Gln
M0058050 IJGONIID_00028 20769 6 Skin 0.04 protein_coding missense_variant MODERATE 652C>A His218Asn
M0058051 IJGONIID_00028 20773 6 Skin 0.04 protein_coding synonymous_variant LOW 648A>G Gln216Gln
M0058052 IJGONIID_00028 20776 6 Skin 0.04 protein_coding missense_variant MODERATE 645A>C Glu215Asp
M0058053 IJGONIID_00029 21580 3 Skin 0.02 protein_coding missense_variant MODERATE 2179C>A Arg727Ser
M0058054 IJGONIID_00029 21728 5 Skin 0.04 protein_coding synonymous_variant LOW 2031T>C Asn677Asn
M0058055 IJGONIID_00029 21804 3 Skin 0.02 protein_coding missense_variant MODERATE 1955G>A Arg652Lys
M0058056 IJGONIID_00029 21992 5 Skin 0.04 protein_coding synonymous_variant LOW 1767T>C Ser589Ser
M0058057 IJGONIID_00029 22104 6 Skin 0.04 protein_coding missense_variant MODERATE 1655G>A Arg552His
M0058058 IJGONIID_00029 22106 6 Skin 0.04 protein_coding synonymous_variant LOW 1653C>T Asn551Asn
M0058059 IJGONIID_00029 22133 6 Skin 0.04 protein_coding synonymous_variant LOW 1626T>C Gly542Gly
M0058060 IJGONIID_00029 22144 6 Skin 0.04 protein_coding missense_variant MODERATE 1615A>G Thr539Ala
M0058061 IJGONIID_00029 22145 6 Skin 0.04 protein_coding synonymous_variant LOW 1614T>C Ile538Ile
M0058062 IJGONIID_00029 22151 6 Skin 0.04 protein_coding synonymous_variant LOW 1608G>A Ser536Ser
M0058063 IJGONIID_00029 22210 6 Skin 0.04 protein_coding missense_variant MODERATE 1549C>G Arg517Gly
M0058064 IJGONIID_00029 22329 5 Skin 0.04 protein_coding missense_variant MODERATE 1430C>T Ser477Leu
M0058065 IJGONIID_00029 22334 5 Skin 0.04 protein_coding synonymous_variant LOW 1425T>C Thr475Thr
M0058066 IJGONIID_00029 22386 3 Skin 0.02 protein_coding missense_variant MODERATE 1373G>T Trp458Leu
M0058067 IJGONIID_00029 22394 5 Skin 0.04 protein_coding synonymous_variant LOW 1365T>C Ile455Ile
M0058068 IJGONIID_00029 22398 5 Skin 0.04 protein_coding missense_variant MODERATE 1361C>T Ala454Val
M0058069 IJGONIID_00029 22403 5 Skin 0.04 protein_coding synonymous_variant LOW 1356G>C Ala452Ala
M0058070 IJGONIID_00029 22404 5 Skin 0.04 protein_coding missense_variant MODERATE 1355C>G Ala452Gly
M0058071 IJGONIID_00029 22408 5 Skin 0.04 protein_coding missense_variant MODERATE 1351G>A Gly451Arg
M0058072 IJGONIID_00029 22412 6 Skin 0.04 protein_coding synonymous_variant LOW 1347T>C Ser449Ser
M0058073 IJGONIID_00029 22415 6 Skin 0.04 protein_coding synonymous_variant LOW 1344C>T Arg448Arg
M0058074 IJGONIID_00015 8717 17 Skin 0.12 protein_coding missense_variant MODERATE 523C>T Arg175Trp
M0058075 IJGONIID_00015 9063 8 Skin 0.06 protein_coding synonymous_variant LOW 177T>C Pro59Pro
M0058076 IJGONIID_00016 9539 17 Skin 0.12 protein_coding missense_variant MODERATE 65T>G Val22Gly
M0058077 IJGONIID_00016 9542 17 Skin 0.12 protein_coding stop_gained HIGH 68G>A Trp23*
M0058078 IJGONIID_00021 14064 17 Skin 0.12 protein_coding missense_variant MODERATE 1913G>C Gly638Ala
M0058079 IJGONIID_00021 14360 8 Skin 0.06 protein_coding synonymous_variant LOW 1617A>G Ala539Ala
M0058080 IJGONIID_00021 14417 8 Skin 0.06 protein_coding synonymous_variant LOW 1560A>G Ala520Ala
M0058081 IJGONIID_00021 14453 8 Skin 0.06 protein_coding synonymous_variant LOW 1524T>C Asp508Asp
M0058082 IJGONIID_00021 14477 8 Skin 0.06 protein_coding synonymous_variant LOW 1500A>G Thr500Thr
M0058083 IJGONIID_00021 14486 7 Skin 0.05 protein_coding synonymous_variant LOW 1491T>G Leu497Leu
M0058084 IJGONIID_00021 14576 9 Skin 0.07 protein_coding synonymous_variant LOW 1401G>A Ala467Ala
M0058085 IJGONIID_00021 14792 9 Skin 0.07 protein_coding synonymous_variant LOW 1185T>C Ser395Ser
M0058086 IJGONIID_00021 14827 9 Skin 0.07 protein_coding missense_variant MODERATE 1150G>T Ala384Ser
M0058087 IJGONIID_00021 14927 11 Skin 0.08 protein_coding synonymous_variant LOW 1050C>T Val350Val
M0058088 IJGONIID_00021 14928 11 Skin 0.08 protein_coding missense_variant MODERATE 1049T>C Val350Ala
M0058089 IJGONIID_00021 14941 9 Skin 0.07 protein_coding missense_variant MODERATE 1036G>A Ala346Thr
M0058090 IJGONIID_00021 15017 11 Skin 0.08 protein_coding synonymous_variant LOW 960G>A Leu320Leu
M0058091 IJGONIID_00021 15044 9 Skin 0.07 protein_coding synonymous_variant LOW 933T>C Asn311Asn
M0058092 IJGONIID_00021 15047 9 Skin 0.07 protein_coding synonymous_variant LOW 930T>C Ser310Ser
M0058093 IJGONIID_00021 15071 16 Skin 0.12 protein_coding synonymous_variant LOW 906T>C Thr302Thr
M0058094 IJGONIID_00021 15161 8 Skin 0.06 protein_coding synonymous_variant LOW 816T>C Val272Val
M0058095 IJGONIID_00021 15346 9 Skin 0.07 protein_coding missense_variant MODERATE 631G>A Ala211Thr
M0058096 IJGONIID_00021 15390 9 Skin 0.07 protein_coding missense_variant MODERATE 587T>C Val196Ala
M0058097 IJGONIID_00021 15662 11 Skin 0.08 protein_coding synonymous_variant LOW 315G>A Glu105Glu
M0058098 IJGONIID_00021 15788 18 Skin 0.13 protein_coding synonymous_variant LOW 189C>T Gly63Gly
M0058099 IJGONIID_00021 15824 9 Skin 0.07 protein_coding synonymous_variant LOW 153T>C His51His
M0058100 IJGONIID_00021 15890 9 Skin 0.07 protein_coding synonymous_variant LOW 87G>A Arg29Arg
M0058101 IJGONIID_00021 16008 9 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -32G>A None
M0058102 IJGONIID_00021 16109 14 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -133G>A None
M0058103 IJGONIID_00022 16299 21 Skin 0.15 protein_coding missense_variant MODERATE 182A>C Gln61Pro
M0058104 IJGONIID_00022 16332 14 Skin 0.10 protein_coding missense_variant MODERATE 149G>A Gly50Asp
M0058105 IJGONIID_00014 8318 3 Skin 0.02 protein_coding missense_variant MODERATE 274C>T Leu92Phe
M0058106 IJGONIID_00014 8332 3 Skin 0.02 protein_coding missense_variant MODERATE 260A>G Asp87Gly
M0058107 IJGONIID_00014 8411 12 Skin 0.09 protein_coding missense_variant MODERATE 181G>A Ala61Thr
M0058108 IJGONIID_00014 8440 3 Skin 0.02 protein_coding missense_variant MODERATE 152A>G Asp51Gly
M0058109 IJGONIID_00014 8489 3 Skin 0.02 protein_coding missense_variant MODERATE 103A>G Ile35Val
M0058110 IJGONIID_00014 8571 3 Skin 0.02 protein_coding synonymous_variant LOW 21A>G Val7Val
M0058111 IJGONIID_00015 8603 3 Skin 0.02 protein_coding missense_variant MODERATE 637A>G Met213Val
M0058112 IJGONIID_00015 9149 3 Skin 0.02 protein_coding missense_variant MODERATE 91C>T Pro31Ser
M0058113 IJGONIID_00021 15680 5 Skin 0.04 protein_coding synonymous_variant LOW 297T>C Asn99Asn
M0058114 IJGONIID_00021 16859 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -883C>A None
M0058115 IJGONIID_00021 16924 8 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -948T>C None
M0058116 IJGONIID_00021 16973 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -997G>A None
M0058117 IJGONIID_00021 16975 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -999G>T None
M0058118 IJGONIID_00021 16982 4 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1006G>A None
M0058119 IJGONIID_00021 16995 4 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1019A>C None
M0058120 IJGONIID_00024 17083 4 Skin 0.03 protein_coding synonymous_variant LOW 558T>C Asp186Asp
M0058121 IJGONIID_00024 17089 4 Skin 0.03 protein_coding synonymous_variant LOW 552C>A Leu184Leu
M0058122 IJGONIID_00052 42393 3 Skin 0.02 protein_coding synonymous_variant LOW 99A>G Ala33Ala
M0058123 IJGONIID_00052 42495 9 Skin 0.07 protein_coding synonymous_variant LOW 201T>C Ala67Ala
M0058124 IJGONIID_00052 42498 9 Skin 0.07 protein_coding synonymous_variant LOW 204G>A Leu68Leu
M0058125 IJGONIID_00052 42869 18 Skin 0.13 protein_coding missense_variant MODERATE 575T>C Val192Ala
M0058126 IJGONIID_00052 43014 18 Skin 0.13 protein_coding synonymous_variant LOW 720G>A Glu240Glu
M0058127 IJGONIID_00052 43015 18 Skin 0.13 protein_coding synonymous_variant LOW 721T>C Leu241Leu
M0058128 IJGONIID_00052 43020 18 Skin 0.13 protein_coding synonymous_variant LOW 726G>A Val242Val
M0058129 IJGONIID_00052 43101 18 Skin 0.13 protein_coding synonymous_variant LOW 807G>A Ala269Ala
M0058130 IJGONIID_00052 43104 18 Skin 0.13 protein_coding synonymous_variant LOW 810G>C Thr270Thr
M0058131 IJGONIID_00052 43227 19 Skin 0.14 protein_coding synonymous_variant LOW 933T>C Leu311Leu
M0058132 IJGONIID_00052 43255 14 Skin 0.10 protein_coding missense_variant MODERATE 961G>A Ala321Thr
M0058133 IJGONIID_00052 43257 14 Skin 0.10 protein_coding synonymous_variant LOW 963A>C Ala321Ala
M0058134 IJGONIID_00053 43432 12 Skin 0.09 protein_coding synonymous_variant LOW 12G>A Arg4Arg
M0058135 IJGONIID_00053 43471 12 Skin 0.09 protein_coding synonymous_variant LOW 51G>A Val17Val
M0058136 IJGONIID_00053 43591 13 Skin 0.09 protein_coding synonymous_variant LOW 171T>C Gly57Gly
M0058137 IJGONIID_00053 43656 12 Skin 0.09 protein_coding missense_variant MODERATE 236A>C His79Pro
M0058138 IJGONIID_00054 43814 12 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -268T>C None
M0058139 IJGONIID_00054 43826 18 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -256G>T None
M0058140 IJGONIID_00054 44068 11 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -14T>C None
M0058141 IJGONIID_00054 44132 18 Skin 0.13 protein_coding synonymous_variant LOW 51C>T Cys17Cys
M0058142 IJGONIID_00054 44213 10 Skin 0.07 protein_coding synonymous_variant LOW 132T>C Asp44Asp
M0058143 IJGONIID_00054 44388 12 Skin 0.09 protein_coding missense_variant MODERATE 307A>G Thr103Ala
M0058144 IJGONIID_00054 44657 11 Skin 0.08 protein_coding synonymous_variant LOW 576C>T Asp192Asp
M0058145 IJGONIID_00021 14192 11 Skin 0.08 protein_coding synonymous_variant LOW 1785T>C Phe595Phe
M0058146 IJGONIID_00021 14267 11 Skin 0.08 protein_coding synonymous_variant LOW 1710G>C Thr570Thr
M0058147 IJGONIID_00021 14268 11 Skin 0.08 protein_coding missense_variant MODERATE 1709C>G Thr570Arg
M0058148 IJGONIID_00021 14517 11 Skin 0.08 protein_coding missense_variant MODERATE 1460T>C Val487Ala
M0058149 IJGONIID_00021 14532 11 Skin 0.08 protein_coding missense_variant MODERATE 1445T>C Val482Ala
M0058150 IJGONIID_00021 14582 10 Skin 0.07 protein_coding synonymous_variant LOW 1395T>G Leu465Leu
M0058151 IJGONIID_00021 14754 11 Skin 0.08 protein_coding missense_variant MODERATE 1223G>A Arg408Gln
M0058152 IJGONIID_00021 14966 10 Skin 0.07 protein_coding synonymous_variant LOW 1011G>A Ala337Ala
M0058153 IJGONIID_00021 14981 10 Skin 0.07 protein_coding synonymous_variant LOW 996G>T Pro332Pro
M0058154 IJGONIID_00021 14982 10 Skin 0.07 protein_coding missense_variant MODERATE 995C>G Pro332Arg
M0058155 IJGONIID_00021 14983 10 Skin 0.07 protein_coding missense_variant MODERATE 994C>A Pro332Thr
M0058156 IJGONIID_00021 14984 10 Skin 0.07 protein_coding synonymous_variant LOW 993G>A Lys331Lys
M0058157 IJGONIID_00022 16300 12 Skin 0.09 protein_coding stop_gained HIGH 181C>T Gln61*
M0058158 IJGONIID_00043 34749 4 Skin 0.03 protein_coding synonymous_variant LOW 322C>T Leu108Leu
M0058159 IJGONIID_00043 34757 13 Skin 0.09 protein_coding synonymous_variant LOW 330C>G Arg110Arg
M0058160 IJGONIID_00043 34764 12 Skin 0.09 protein_coding synonymous_variant LOW 337A>C Arg113Arg
M0058161 IJGONIID_00043 34766 12 Skin 0.09 protein_coding missense_variant MODERATE 339G>T Arg113Ser
M0058162 IJGONIID_00043 34796 13 Skin 0.09 protein_coding synonymous_variant LOW 369C>A Arg123Arg
M0058163 IJGONIID_00043 35069 10 Skin 0.07 protein_coding synonymous_variant LOW 642A>G Glu214Glu
M0058164 IJGONIID_00044 35317 8 Skin 0.06 protein_coding synonymous_variant LOW 27A>G Leu9Leu
M0058165 IJGONIID_00044 35362 14 Skin 0.10 protein_coding synonymous_variant LOW 72A>G Ala24Ala
M0058166 IJGONIID_00044 36169 3 Skin 0.02 protein_coding synonymous_variant LOW 879C>A Leu293Leu
M0058167 IJGONIID_00067 51620 5 Skin 0.04 protein_coding synonymous_variant LOW 348T>C Gly116Gly
M0058168 IJGONIID_00067 51827 13 Skin 0.09 protein_coding synonymous_variant LOW 141C>T Gly47Gly
M0058169 IJGONIID_00067 51830 12 Skin 0.09 protein_coding synonymous_variant LOW 138T>A Pro46Pro
M0058170 IJGONIID_00060 52083 13 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3147G>C None
M0058171 IJGONIID_00043 34724 4 Skin 0.03 protein_coding synonymous_variant LOW 297G>A Pro99Pro
M0058172 IJGONIID_00043 34730 4 Skin 0.03 protein_coding synonymous_variant LOW 303T>C Asp101Asp
M0058173 IJGONIID_00043 34733 4 Skin 0.03 protein_coding synonymous_variant LOW 306T>C Ile102Ile
M0058174 IJGONIID_00043 34772 12 Skin 0.09 protein_coding synonymous_variant LOW 345G>C Val115Val
M0058175 IJGONIID_00043 34985 7 Skin 0.05 protein_coding synonymous_variant LOW 558T>C His186His
M0058176 IJGONIID_00044 36043 8 Skin 0.06 protein_coding synonymous_variant LOW 753G>A Leu251Leu
M0058177 IJGONIID_00044 36083 10 Skin 0.07 protein_coding missense_variant MODERATE 793A>G Thr265Ala
M0058178 IJGONIID_00044 36085 10 Skin 0.07 protein_coding synonymous_variant LOW 795G>C Thr265Thr
M0058179 IJGONIID_00038 36186 11 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4729T>G None
M0058180 IJGONIID_00045 36336 10 Skin 0.07 protein_coding missense_variant MODERATE 52T>C Tyr18His
M0058181 IJGONIID_00046 36649 5 Skin 0.04 protein_coding synonymous_variant LOW 165G>A Glu55Glu
M0058182 IJGONIID_00046 36731 8 Skin 0.06 protein_coding missense_variant MODERATE 247G>A Ala83Thr
M0058183 IJGONIID_00046 36733 8 Skin 0.06 protein_coding synonymous_variant LOW 249G>C Ala83Ala
M0058184 IJGONIID_00046 36778 5 Skin 0.04 protein_coding synonymous_variant LOW 294G>C Val98Val
M0058185 IJGONIID_00046 36779 5 Skin 0.04 protein_coding missense_variant MODERATE 295G>T Val99Leu
M0058186 IJGONIID_00046 36780 5 Skin 0.04 protein_coding missense_variant MODERATE 296T>C Val99Ala
M0058187 IJGONIID_00046 36781 5 Skin 0.04 protein_coding synonymous_variant LOW 297G>A Val99Val
M0058188 IJGONIID_00046 36784 5 Skin 0.04 protein_coding synonymous_variant LOW 300C>T Gly100Gly
M0058189 IJGONIID_00046 36817 5 Skin 0.04 protein_coding synonymous_variant LOW 333T>G Pro111Pro
M0058190 IJGONIID_00047 36879 7 Skin 0.05 protein_coding synonymous_variant LOW 21T>C Gly7Gly
M0058191 IJGONIID_00047 36999 15 Skin 0.11 protein_coding synonymous_variant LOW 141G>T Gly47Gly
M0058192 IJGONIID_00047 37203 9 Skin 0.07 protein_coding synonymous_variant LOW 345G>A Gly115Gly
M0058193 IJGONIID_00048 37282 10 Skin 0.07 protein_coding synonymous_variant LOW 9T>C Arg3Arg
M0058194 IJGONIID_00048 37333 6 Skin 0.04 protein_coding synonymous_variant LOW 60G>A Pro20Pro
M0058195 IJGONIID_00048 37336 3 Skin 0.02 protein_coding synonymous_variant LOW 63G>A Val21Val
M0058196 IJGONIID_00048 37459 6 Skin 0.04 protein_coding synonymous_variant LOW 186T>A Leu62Leu
M0058197 IJGONIID_00049 37713 14 Skin 0.10 protein_coding synonymous_variant LOW 42T>G Leu14Leu
M0058198 IJGONIID_00049 37734 3 Skin 0.02 protein_coding synonymous_variant LOW 63G>C Pro21Pro
M0058199 IJGONIID_00049 37830 14 Skin 0.10 protein_coding synonymous_variant LOW 159T>G Ser53Ser
M0058200 IJGONIID_00049 37983 4 Skin 0.03 protein_coding synonymous_variant LOW 312T>C Leu104Leu
M0058201 IJGONIID_00049 38091 11 Skin 0.08 protein_coding synonymous_variant LOW 420A>C Gly140Gly
M0058202 IJGONIID_00049 38279 3 Skin 0.02 protein_coding missense_variant MODERATE 608T>C Val203Ala
M0058203 IJGONIID_00049 38307 3 Skin 0.02 protein_coding synonymous_variant LOW 636C>T Pro212Pro
M0058204 IJGONIID_00049 38308 6 Skin 0.04 protein_coding missense_variant MODERATE 637G>A Glu213Lys
M0058205 IJGONIID_00049 38322 10 Skin 0.07 protein_coding synonymous_variant LOW 651G>A Ala217Ala
M0058206 IJGONIID_00049 38323 10 Skin 0.07 protein_coding missense_variant MODERATE 652A>G Ile218Val
M0058207 IJGONIID_00049 38328 4 Skin 0.03 protein_coding synonymous_variant LOW 657T>C His219His
M0058208 IJGONIID_00049 38742 8 Skin 0.06 protein_coding synonymous_variant LOW 1071T>C Gly357Gly
M0058209 IJGONIID_00049 39352 15 Skin 0.11 protein_coding missense_variant MODERATE 1681A>G Ser561Gly
M0058210 IJGONIID_00049 39402 11 Skin 0.08 protein_coding synonymous_variant LOW 1731C>G Val577Val
M0058211 IJGONIID_00049 39423 4 Skin 0.03 protein_coding synonymous_variant LOW 1752A>G Leu584Leu
M0058212 IJGONIID_00049 39467 4 Skin 0.03 protein_coding missense_variant MODERATE 1796A>G Asn599Ser
M0058213 IJGONIID_00049 39597 14 Skin 0.10 protein_coding synonymous_variant LOW 1926G>C Arg642Arg
M0058214 IJGONIID_00049 39603 14 Skin 0.10 protein_coding synonymous_variant LOW 1932G>A Ser644Ser
M0058215 IJGONIID_00049 39606 14 Skin 0.10 protein_coding synonymous_variant LOW 1935G>C Val645Val
M0058216 IJGONIID_00049 39637 14 Skin 0.10 protein_coding missense_variant MODERATE 1966C>G His656Asp
M0058217 IJGONIID_00049 40006 13 Skin 0.09 protein_coding missense_variant MODERATE 2335A>G Asn779Asp
M0058218 IJGONIID_00049 40299 15 Skin 0.11 protein_coding synonymous_variant LOW 2628C>G Ala876Ala
M0058219 IJGONIID_00049 40530 3 Skin 0.02 protein_coding synonymous_variant LOW 2859A>G Thr953Thr
M0058220 IJGONIID_00049 40533 3 Skin 0.02 protein_coding synonymous_variant LOW 2862C>T Asp954Asp
M0058221 IJGONIID_00049 40539 3 Skin 0.02 protein_coding synonymous_variant LOW 2868C>T Ala956Ala
M0058222 IJGONIID_00049 40555 12 Skin 0.09 protein_coding synonymous_variant LOW 2884C>T Leu962Leu
M0058223 IJGONIID_00049 40668 13 Skin 0.09 protein_coding synonymous_variant LOW 2997A>T Val999Val
M0058224 IJGONIID_00049 40674 13 Skin 0.09 protein_coding synonymous_variant LOW 3003A>G Glu1001Glu
M0058225 IJGONIID_00049 40776 5 Skin 0.04 protein_coding synonymous_variant LOW 3105A>G Ala1035Ala
M0058226 IJGONIID_00071 54230 4 Skin 0.03 protein_coding missense_variant MODERATE 497C>A Ala166Asp
M0058227 IJGONIID_00071 54569 3 Skin 0.02 protein_coding missense_variant MODERATE 158A>G Asp53Gly
M0058228 IJGONIID_00030 29804 4 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3530C>A None
M0058229 IJGONIID_00030 29932 4 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3658G>C None
M0058230 IJGONIID_00036 29957 4 Skin 0.03 protein_coding missense_variant MODERATE 24A>T Arg8Ser
M0058231 IJGONIID_00036 29960 4 Skin 0.03 protein_coding synonymous_variant LOW 27G>T Pro9Pro
M0058232 IJGONIID_00036 29987 7 Skin 0.05 protein_coding synonymous_variant LOW 54C>T Thr18Thr
M0058233 IJGONIID_00036 29990 7 Skin 0.05 protein_coding synonymous_variant LOW 57C>T Ile19Ile
M0058234 IJGONIID_00036 29996 7 Skin 0.05 protein_coding synonymous_variant LOW 63A>G Val21Val
M0058235 IJGONIID_00036 30017 7 Skin 0.05 protein_coding synonymous_variant LOW 84C>G Thr28Thr
M0058236 IJGONIID_00036 30128 5 Skin 0.04 protein_coding synonymous_variant LOW 195C>A Ile65Ile
M0058237 IJGONIID_00036 30134 5 Skin 0.04 protein_coding synonymous_variant LOW 201C>A Ala67Ala
M0058238 IJGONIID_00036 30135 5 Skin 0.04 protein_coding missense_variant MODERATE 202A>G Asn68Asp
M0058239 IJGONIID_00036 30136 5 Skin 0.04 protein_coding missense_variant MODERATE 203A>G Asn68Ser
M0058240 IJGONIID_00036 30137 5 Skin 0.04 protein_coding missense_variant MODERATE 204T>A Asn68Lys
M0058241 IJGONIID_00036 30140 5 Skin 0.04 protein_coding synonymous_variant LOW 207G>A Glu69Glu
M0058242 IJGONIID_00036 30149 5 Skin 0.04 protein_coding synonymous_variant LOW 216A>G Arg72Arg
M0058243 IJGONIID_00036 30155 5 Skin 0.04 protein_coding missense_variant MODERATE 222A>G Ile74Met
M0058244 IJGONIID_00036 30187 3 Skin 0.02 protein_coding missense_variant MODERATE 254C>T Ala85Val
M0058245 IJGONIID_00036 30290 5 Skin 0.04 protein_coding missense_variant MODERATE 357G>C Glu119Asp
M0058246 IJGONIID_00036 30293 5 Skin 0.04 protein_coding synonymous_variant LOW 360G>A Arg120Arg
M0058247 IJGONIID_00036 30332 3 Skin 0.02 protein_coding synonymous_variant LOW 399T>C Leu133Leu
M0058248 IJGONIID_00036 30335 3 Skin 0.02 protein_coding synonymous_variant LOW 402C>G Ala134Ala
M0058249 IJGONIID_00037 31014 3 Skin 0.02 protein_coding synonymous_variant LOW 153C>T Pro51Pro
M0058250 IJGONIID_00038 31352 10 Skin 0.07 protein_coding missense_variant MODERATE 106G>A Ala36Thr
M0058251 IJGONIID_00038 31379 8 Skin 0.06 protein_coding missense_variant MODERATE 79C>T Pro27Ser
M0058252 IJGONIID_00040 32712 4 Skin 0.03 protein_coding missense_variant MODERATE 595C>G Gln199Glu
M0058253 IJGONIID_00041 33044 3 Skin 0.02 protein_coding missense_variant MODERATE 112A>G Thr38Ala
M0058254 IJGONIID_00042 33774 10 Skin 0.07 protein_coding synonymous_variant LOW 81T>G Gly27Gly
M0058255 IJGONIID_00042 34326 14 Skin 0.10 protein_coding synonymous_variant LOW 633C>T Ala211Ala
M0058256 IJGONIID_00042 34329 14 Skin 0.10 protein_coding synonymous_variant LOW 636T>C Asp212Asp
M0058257 IJGONIID_00042 34330 14 Skin 0.10 protein_coding missense_variant MODERATE 637G>T Ala213Ser
M0058258 IJGONIID_00042 34338 14 Skin 0.10 protein_coding synonymous_variant LOW 645C>A Thr215Thr
M0058259 IJGONIID_00042 34341 14 Skin 0.10 protein_coding synonymous_variant LOW 648T>C Gly216Gly
M0058260 IJGONIID_00042 34348 14 Skin 0.10 protein_coding synonymous_variant LOW 655T>C Leu219Leu
M0058261 IJGONIID_00042 34350 14 Skin 0.10 protein_coding missense_variant MODERATE 657G>C Leu219Phe
M0058262 IJGONIID_00042 34353 14 Skin 0.10 protein_coding synonymous_variant LOW 660C>G Thr220Thr
M0058263 IJGONIID_00042 34356 14 Skin 0.10 protein_coding synonymous_variant LOW 663G>A Pro221Pro
M0058264 IJGONIID_00043 34461 3 Skin 0.02 protein_coding missense_variant MODERATE 34G>A Val12Met
M0058265 IJGONIID_00043 34464 3 Skin 0.02 protein_coding missense_variant MODERATE 37A>G Thr13Ala
M0058266 IJGONIID_00043 34523 5 Skin 0.04 protein_coding synonymous_variant LOW 96T>G Gly32Gly
M0058267 IJGONIID_00003 751 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -687C>T None
M0058268 IJGONIID_00003 755 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -683A>G None
M0058269 IJGONIID_00002 1387 9 Skin 0.07 protein_coding synonymous_variant LOW 9C>T Gly3Gly
M0058270 IJGONIID_00003 1780 9 Skin 0.07 protein_coding missense_variant MODERATE 343A>G Ser115Gly
M0058271 IJGONIID_00003 1781 7 Skin 0.05 protein_coding missense_variant MODERATE 344G>A Ser115Asn
M0058272 IJGONIID_00004 2087 12 Skin 0.09 protein_coding synonymous_variant LOW 156A>C Leu52Leu
M0058273 IJGONIID_00049 39303 10 Skin 0.07 protein_coding synonymous_variant LOW 1632T>C Cys544Cys
M0058274 IJGONIID_00049 39406 7 Skin 0.05 protein_coding missense_variant MODERATE 1735G>A Ala579Thr
M0058275 IJGONIID_00049 39682 9 Skin 0.07 protein_coding missense_variant MODERATE 2011G>C Val671Leu
M0058276 IJGONIID_00049 39979 10 Skin 0.07 protein_coding missense_variant MODERATE 2308G>A Ala770Thr
M0058277 IJGONIID_00049 39996 9 Skin 0.07 protein_coding synonymous_variant LOW 2325T>C Arg775Arg
M0058278 IJGONIID_00049 40068 9 Skin 0.07 protein_coding synonymous_variant LOW 2397T>C His799His
M0058279 IJGONIID_00049 40551 10 Skin 0.07 protein_coding synonymous_variant LOW 2880G>A Gly960Gly
M0058280 IJGONIID_00049 40576 8 Skin 0.06 protein_coding synonymous_variant LOW 2905T>C Leu969Leu
M0058281 IJGONIID_00049 40641 6 Skin 0.04 protein_coding synonymous_variant LOW 2970G>A Glu990Glu
M0058282 IJGONIID_00049 40669 11 Skin 0.08 protein_coding missense_variant MODERATE 2998T>G Ser1000Ala
M0058283 IJGONIID_00049 40677 6 Skin 0.04 protein_coding synonymous_variant LOW 3006G>A Leu1002Leu
M0058284 IJGONIID_00049 40680 6 Skin 0.04 protein_coding synonymous_variant LOW 3009C>T Val1003Val
M0058285 IJGONIID_00049 40719 13 Skin 0.09 protein_coding synonymous_variant LOW 3048T>C Asp1016Asp
M0058286 IJGONIID_00049 40720 13 Skin 0.09 protein_coding synonymous_variant LOW 3049T>C Leu1017Leu
M0058287 IJGONIID_00049 40722 13 Skin 0.09 protein_coding missense_variant MODERATE 3051G>C Leu1017Phe
M0058288 IJGONIID_00049 40724 13 Skin 0.09 protein_coding missense_variant MODERATE 3053G>A Ser1018Asn
M0058289 IJGONIID_00049 40727 13 Skin 0.09 protein_coding missense_variant MODERATE 3056C>A Ala1019Asp
M0058290 IJGONIID_00049 40728 13 Skin 0.09 protein_coding synonymous_variant LOW 3057C>G Ala1019Ala
M0058291 IJGONIID_00050 40814 8 Skin 0.06 protein_coding synonymous_variant LOW 36T>C Val12Val
M0058292 IJGONIID_00050 40828 8 Skin 0.06 protein_coding missense_variant MODERATE 50G>T Arg17Leu
M0058293 IJGONIID_00050 40895 6 Skin 0.04 protein_coding synonymous_variant LOW 117A>T Ala39Ala
M0058294 IJGONIID_00050 40948 6 Skin 0.04 protein_coding missense_variant MODERATE 170A>G His57Arg
M0058295 IJGONIID_00050 40963 6 Skin 0.04 protein_coding missense_variant MODERATE 185C>A Thr62Lys
M0058296 IJGONIID_00050 40985 6 Skin 0.04 protein_coding synonymous_variant LOW 207C>T Ser69Ser
M0058297 IJGONIID_00050 40987 6 Skin 0.04 protein_coding missense_variant MODERATE 209T>C Val70Ala
M0058298 IJGONIID_00050 40994 6 Skin 0.04 protein_coding synonymous_variant LOW 216G>A Glu72Glu
M0058299 IJGONIID_00050 41225 6 Skin 0.04 protein_coding synonymous_variant LOW 447T>C Pro149Pro
M0058300 IJGONIID_00050 41228 6 Skin 0.04 protein_coding synonymous_variant LOW 450G>A Glu150Glu
M0058301 IJGONIID_00050 41231 6 Skin 0.04 protein_coding synonymous_variant LOW 453T>G Ala151Ala
M0058302 IJGONIID_00050 41234 6 Skin 0.04 protein_coding synonymous_variant LOW 456C>T Ala152Ala
M0058303 IJGONIID_00051 41438 6 Skin 0.04 protein_coding missense_variant MODERATE 46G>A Ala16Thr
M0058304 IJGONIID_00051 41545 9 Skin 0.07 protein_coding synonymous_variant LOW 153T>C His51His
M0058305 IJGONIID_00051 41551 9 Skin 0.07 protein_coding synonymous_variant LOW 159T>C Gly53Gly
M0058306 IJGONIID_00051 41647 6 Skin 0.04 protein_coding synonymous_variant LOW 255C>T Asp85Asp
M0058307 IJGONIID_00052 42504 6 Skin 0.04 protein_coding synonymous_variant LOW 210A>G Gly70Gly
M0058308 IJGONIID_00052 42507 6 Skin 0.04 protein_coding synonymous_variant LOW 213A>G Glu71Glu
M0058309 IJGONIID_00052 42509 6 Skin 0.04 protein_coding missense_variant MODERATE 215G>A Gly72Asp
M0058310 IJGONIID_00052 42510 6 Skin 0.04 protein_coding synonymous_variant LOW 216C>T Gly72Gly
M0058311 IJGONIID_00052 42513 6 Skin 0.04 protein_coding synonymous_variant LOW 219C>T Asp73Asp
M0058312 IJGONIID_00021 16022 6 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -46A>G None
M0058313 IJGONIID_00021 16176 10 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -200C>T None
M0058314 IJGONIID_00023 16788 5 Skin 0.04 protein_coding missense_variant MODERATE 7C>G Pro3Ala
M0058315 IJGONIID_00024 17128 6 Skin 0.04 protein_coding synonymous_variant LOW 513T>G Thr171Thr
M0058316 IJGONIID_00024 17132 6 Skin 0.04 protein_coding missense_variant MODERATE 509T>C Val170Ala
M0058317 IJGONIID_00024 17134 6 Skin 0.04 protein_coding missense_variant MODERATE 507G>C Gln169His
M0058318 IJGONIID_00024 17162 3 Skin 0.02 protein_coding missense_variant MODERATE 479T>C Val160Ala
M0058319 IJGONIID_00024 17383 3 Skin 0.02 protein_coding synonymous_variant LOW 258C>T Ile86Ile
M0058320 IJGONIID_00024 17392 3 Skin 0.02 protein_coding synonymous_variant LOW 249A>T Val83Val
M0058321 IJGONIID_00024 17502 3 Skin 0.02 protein_coding missense_variant MODERATE 139A>T Met47Leu
M0058322 IJGONIID_00024 17536 3 Skin 0.02 protein_coding synonymous_variant LOW 105A>G Lys35Lys
M0058323 IJGONIID_00024 17545 3 Skin 0.02 protein_coding synonymous_variant LOW 96C>T Ser32Ser
M0058324 IJGONIID_00024 17546 3 Skin 0.02 protein_coding missense_variant MODERATE 95G>A Ser32Asn
M0058325 IJGONIID_00006 8058 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4426T>C None
M0058326 IJGONIID_00006 8065 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4433G>A None
M0058327 IJGONIID_00006 8067 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4435A>G None
M0058328 IJGONIID_00013 8086 3 Skin 0.02 protein_coding synonymous_variant LOW 7T>C Leu3Leu
M0058329 IJGONIID_00013 8088 3 Skin 0.02 protein_coding synonymous_variant LOW 9G>A Leu3Leu
M0058330 IJGONIID_00013 8121 5 Skin 0.04 protein_coding missense_variant MODERATE 42T>G His14Gln
M0058331 IJGONIID_00013 8128 5 Skin 0.04 protein_coding missense_variant MODERATE 49G>A Val17Ile
M0058332 IJGONIID_00013 8133 5 Skin 0.04 protein_coding synonymous_variant LOW 54C>T Arg18Arg
M0058333 IJGONIID_00013 8196 7 Skin 0.05 protein_coding synonymous_variant LOW 117G>A Arg39Arg
M0058334 IJGONIID_00014 8373 3 Skin 0.02 protein_coding synonymous_variant LOW 219C>T Asn73Asn
M0058335 IJGONIID_00014 8375 3 Skin 0.02 protein_coding missense_variant MODERATE 217A>G Asn73Asp
M0058336 IJGONIID_00014 8453 9 Skin 0.07 protein_coding missense_variant MODERATE 139C>T Pro47Ser
M0058337 IJGONIID_00014 8506 9 Skin 0.07 protein_coding missense_variant MODERATE 86A>G Asp29Gly
M0058338 IJGONIID_00015 8651 9 Skin 0.07 protein_coding missense_variant MODERATE 589A>G Thr197Ala
M0058339 IJGONIID_00015 8693 8 Skin 0.06 protein_coding missense_variant MODERATE 547C>T Arg183Cys
M0058340 IJGONIID_00015 8745 9 Skin 0.07 protein_coding synonymous_variant LOW 495A>G Val165Val
M0058341 IJGONIID_00015 8776 3 Skin 0.02 protein_coding missense_variant MODERATE 464C>T Ser155Leu
M0058342 IJGONIID_00015 8852 9 Skin 0.07 protein_coding missense_variant MODERATE 388T>G Ser130Ala
M0058343 IJGONIID_00007 9247 8 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3922A>G None
M0058344 IJGONIID_00016 9476 9 Skin 0.07 protein_coding start_lost HIGH 2T>C Met1?
M0058345 IJGONIID_00021 14959 9 Skin 0.07 protein_coding missense_variant MODERATE 1018T>A Ser340Thr
M0058346 IJGONIID_00040 32792 4 Skin 0.03 protein_coding synonymous_variant LOW 675T>C His225His
M0058347 IJGONIID_00041 33610 3 Skin 0.02 protein_coding synonymous_variant LOW 678A>T Ser226Ser
M0058348 IJGONIID_00041 33611 3 Skin 0.02 protein_coding missense_variant MODERATE 679G>T Ala227Ser
M0058349 IJGONIID_00041 33616 3 Skin 0.02 protein_coding synonymous_variant LOW 684A>G Glu228Glu
M0058350 IJGONIID_00041 33622 3 Skin 0.02 protein_coding synonymous_variant LOW 690A>G Ser230Ser
M0058351 IJGONIID_00041 33684 4 Skin 0.03 protein_coding missense_variant MODERATE 752A>C His251Pro
M0058352 IJGONIID_00041 33687 3 Skin 0.02 protein_coding missense_variant MODERATE 755T>G Ile252Ser
M0058353 IJGONIID_00041 33690 3 Skin 0.02 protein_coding missense_variant MODERATE 758C>G Ala253Gly
M0058354 IJGONIID_00043 34470 5 Skin 0.04 protein_coding synonymous_variant LOW 43C>T Leu15Leu
M0058355 IJGONIID_00043 34472 5 Skin 0.04 protein_coding synonymous_variant LOW 45A>G Leu15Leu
M0058356 IJGONIID_00043 34574 3 Skin 0.02 protein_coding synonymous_variant LOW 147T>A Thr49Thr
M0058357 IJGONIID_00043 34577 3 Skin 0.02 protein_coding synonymous_variant LOW 150T>A Gly50Gly
M0058358 IJGONIID_00043 34622 4 Skin 0.03 protein_coding synonymous_variant LOW 195T>C Leu65Leu
M0058359 IJGONIID_00043 34628 4 Skin 0.03 protein_coding synonymous_variant LOW 201T>C Gly67Gly
M0058360 IJGONIID_00043 34649 7 Skin 0.05 protein_coding synonymous_variant LOW 222T>C Thr74Thr
M0058361 IJGONIID_00043 34652 7 Skin 0.05 protein_coding synonymous_variant LOW 225T>G Gly75Gly
M0058362 IJGONIID_00043 34671 3 Skin 0.02 protein_coding synonymous_variant LOW 244C>T Leu82Leu
M0058363 IJGONIID_00038 36192 5 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -4735G>A None
M0058364 IJGONIID_00047 36986 3 Skin 0.02 protein_coding missense_variant MODERATE 128G>A Ser43Asn
M0058365 IJGONIID_00049 38089 6 Skin 0.04 protein_coding missense_variant MODERATE 418G>C Gly140Arg
M0058366 IJGONIID_00049 38090 6 Skin 0.04 protein_coding missense_variant MODERATE 419G>C Gly140Ala
M0058367 IJGONIID_00049 38092 6 Skin 0.04 protein_coding missense_variant MODERATE 421A>G Thr141Ala
M0058368 IJGONIID_00049 38325 7 Skin 0.05 protein_coding synonymous_variant LOW 654C>T Ile218Ile
M0058369 IJGONIID_00049 38356 8 Skin 0.06 protein_coding missense_variant MODERATE 685A>G Lys229Glu
M0058370 IJGONIID_00049 38674 5 Skin 0.04 protein_coding missense_variant MODERATE 1003A>C Ile335Leu
M0058371 IJGONIID_00049 38692 5 Skin 0.04 protein_coding missense_variant MODERATE 1021A>G Thr341Ala
M0058372 IJGONIID_00049 38710 8 Skin 0.06 protein_coding missense_variant MODERATE 1039G>A Asp347Asn
M0058373 IJGONIID_00056 46017 7 Skin 0.05 protein_coding missense_variant MODERATE 347A>C Asn116Thr
M0058374 IJGONIID_00056 46055 9 Skin 0.07 protein_coding missense_variant MODERATE 385T>G Leu129Val
M0058375 IJGONIID_00056 46056 9 Skin 0.07 protein_coding missense_variant MODERATE 386T>C Leu129Ser
M0058376 IJGONIID_00057 46095 9 Skin 0.07 protein_coding synonymous_variant LOW 30T>C Pro10Pro
M0058377 IJGONIID_00057 46196 7 Skin 0.05 protein_coding missense_variant MODERATE 131A>C Gln44Pro
M0058378 IJGONIID_00057 46203 8 Skin 0.06 protein_coding synonymous_variant LOW 138C>T Asp46Asp
M0058379 IJGONIID_00058 46493 9 Skin 0.07 protein_coding synonymous_variant LOW 111C>T Leu37Leu
M0058380 IJGONIID_00058 46907 6 Skin 0.04 protein_coding synonymous_variant LOW 525C>T Ala175Ala
M0058381 IJGONIID_00058 46991 4 Skin 0.03 protein_coding synonymous_variant LOW 609G>C Val203Val
M0058382 IJGONIID_00058 47077 6 Skin 0.04 protein_coding missense_variant MODERATE 695G>A Gly232Asp
M0058383 IJGONIID_00058 47083 5 Skin 0.04 protein_coding missense_variant MODERATE 701G>A Gly234Glu
M0058384 IJGONIID_00058 47099 8 Skin 0.06 protein_coding synonymous_variant LOW 717G>A Glu239Glu
M0058385 IJGONIID_00058 47185 8 Skin 0.06 protein_coding missense_variant MODERATE 803A>G His268Arg
M0058386 IJGONIID_00029 23141 5 Skin 0.04 protein_coding synonymous_variant LOW 618C>T Gly206Gly
M0058387 IJGONIID_00029 23207 5 Skin 0.04 protein_coding synonymous_variant LOW 552A>G Pro184Pro
M0058388 IJGONIID_00029 23374 11 Skin 0.08 protein_coding missense_variant MODERATE 385T>C Ser129Pro
M0058389 IJGONIID_00029 23396 10 Skin 0.07 protein_coding synonymous_variant LOW 363T>C Asp121Asp
M0058390 IJGONIID_00029 23405 8 Skin 0.06 protein_coding synonymous_variant LOW 354G>A Leu118Leu
M0058391 IJGONIID_00029 23535 10 Skin 0.07 protein_coding missense_variant MODERATE 224C>G Ala75Gly
M0058392 IJGONIID_00029 23536 10 Skin 0.07 protein_coding missense_variant MODERATE 223G>A Ala75Thr
M0058393 IJGONIID_00029 23542 10 Skin 0.07 protein_coding synonymous_variant LOW 217T>C Leu73Leu
M0058394 IJGONIID_00029 23654 8 Skin 0.06 protein_coding synonymous_variant LOW 105G>A Ala35Ala
M0058395 IJGONIID_00030 23768 10 Skin 0.07 protein_coding missense_variant MODERATE 2507G>A Arg836Gln
M0058396 IJGONIID_00030 24070 6 Skin 0.04 protein_coding synonymous_variant LOW 2205T>C Thr735Thr
M0058397 IJGONIID_00030 24073 6 Skin 0.04 protein_coding synonymous_variant LOW 2202T>C Ile734Ile
M0058398 IJGONIID_00030 24076 6 Skin 0.04 protein_coding synonymous_variant LOW 2199C>T Leu733Leu
M0058399 IJGONIID_00030 24085 6 Skin 0.04 protein_coding synonymous_variant LOW 2190C>T Asn730Asn
M0058400 IJGONIID_00030 24115 6 Skin 0.04 protein_coding synonymous_variant LOW 2160T>C Asp720Asp
M0058401 IJGONIID_00030 24118 5 Skin 0.04 protein_coding synonymous_variant LOW 2157C>T Ile719Ile
M0058402 IJGONIID_00030 24229 5 Skin 0.04 protein_coding synonymous_variant LOW 2046T>C Leu682Leu
M0058403 IJGONIID_00030 24282 4 Skin 0.03 protein_coding synonymous_variant LOW 1993T>C Leu665Leu
M0058404 IJGONIID_00030 25027 4 Skin 0.03 protein_coding synonymous_variant LOW 1248A>G Ser416Ser
M0058405 IJGONIID_00041 33341 3 Skin 0.02 protein_coding missense_variant MODERATE 409T>C Trp137Arg
M0058406 IJGONIID_00042 34365 4 Skin 0.03 protein_coding synonymous_variant LOW 672T>C Pro224Pro
M0058407 IJGONIID_00042 34368 4 Skin 0.03 protein_coding synonymous_variant LOW 675T>A Gly225Gly
M0058408 IJGONIID_00003 1846 4 Skin 0.03 protein_coding missense_variant MODERATE 409A>G Thr137Ala
M0058409 IJGONIID_00002 2369 7 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -974T>G None
M0058410 IJGONIID_00005 2580 8 Skin 0.06 protein_coding synonymous_variant LOW 186G>A Arg62Arg
M0058411 IJGONIID_00049 40762 4 Skin 0.03 protein_coding missense_variant MODERATE 3091G>A Ala1031Thr
M0058412 IJGONIID_00053 43404 5 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -17C>A None
M0058413 IJGONIID_00054 44050 6 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -32A>C None
M0058414 IJGONIID_00054 44083 5 Skin 0.04 protein_coding missense_variant MODERATE 2T>A Val1Glu
M0058415 IJGONIID_00054 44287 4 Skin 0.03 protein_coding missense_variant MODERATE 206G>A Arg69Gln
M0058416 IJGONIID_00021 14564 7 Skin 0.05 protein_coding synonymous_variant LOW 1413C>T Asp471Asp
M0058417 IJGONIID_00021 14684 7 Skin 0.05 protein_coding synonymous_variant LOW 1293C>T Val431Val
M0058418 IJGONIID_00021 14689 7 Skin 0.05 protein_coding missense_variant MODERATE 1288A>G Thr430Ala
M0058419 IJGONIID_00021 14690 7 Skin 0.05 protein_coding synonymous_variant LOW 1287C>T Asp429Asp
M0058420 IJGONIID_00021 14708 7 Skin 0.05 protein_coding synonymous_variant LOW 1269A>G Lys423Lys
M0058421 IJGONIID_00021 14711 7 Skin 0.05 protein_coding synonymous_variant LOW 1266T>C Gly422Gly
M0058422 IJGONIID_00021 14766 6 Skin 0.04 protein_coding missense_variant MODERATE 1211C>A Thr404Lys
M0058423 IJGONIID_00021 14816 6 Skin 0.04 protein_coding synonymous_variant LOW 1161C>T Thr387Thr
M0058424 IJGONIID_00021 14867 6 Skin 0.04 protein_coding synonymous_variant LOW 1110C>T Val370Val
M0058425 IJGONIID_00021 14876 6 Skin 0.04 protein_coding synonymous_variant LOW 1101C>T His367His
M0058426 IJGONIID_00021 14900 6 Skin 0.04 protein_coding synonymous_variant LOW 1077C>T His359His
M0058427 IJGONIID_00024 17312 4 Skin 0.03 protein_coding missense_variant MODERATE 329T>C Val110Ala
M0058428 IJGONIID_00024 17635 3 Skin 0.02 protein_coding missense_variant MODERATE 6A>C Gln2His
M0058429 IJGONIID_00027 19689 5 Skin 0.04 protein_coding synonymous_variant LOW 273A>G Ala91Ala
M0058430 IJGONIID_00027 19872 8 Skin 0.06 protein_coding synonymous_variant LOW 90C>T Asp30Asp
M0058431 IJGONIID_00027 19878 8 Skin 0.06 protein_coding synonymous_variant LOW 84G>A Gln28Gln
M0058432 IJGONIID_00027 19881 8 Skin 0.06 protein_coding synonymous_variant LOW 81C>T Ala27Ala
M0058433 IJGONIID_00027 19886 8 Skin 0.06 protein_coding missense_variant MODERATE 76A>G Thr26Ala
M0058434 IJGONIID_00027 19888 8 Skin 0.06 protein_coding missense_variant MODERATE 74C>G Ala25Gly
M0058435 IJGONIID_00027 19889 8 Skin 0.06 protein_coding missense_variant MODERATE 73G>A Ala25Thr
M0058436 IJGONIID_00029 22352 3 Skin 0.02 protein_coding synonymous_variant LOW 1407T>C Ser469Ser
M0058437 IJGONIID_00029 22967 3 Skin 0.02 protein_coding synonymous_variant LOW 792G>C Arg264Arg
M0058438 IJGONIID_00029 23276 4 Skin 0.03 protein_coding synonymous_variant LOW 483A>T Ala161Ala
M0058439 IJGONIID_00030 25484 3 Skin 0.02 protein_coding missense_variant MODERATE 791T>C Val264Ala
M0058440 IJGONIID_00030 25486 3 Skin 0.02 protein_coding synonymous_variant LOW 789C>T Ile263Ile
M0058441 IJGONIID_00030 25489 3 Skin 0.02 protein_coding synonymous_variant LOW 786T>C His262His
M0058442 IJGONIID_00031 26383 10 Skin 0.07 protein_coding missense_variant MODERATE 527T>C Leu176Pro
M0058443 IJGONIID_00031 26645 5 Skin 0.04 protein_coding missense_variant MODERATE 265T>G Ser89Ala
M0058444 IJGONIID_00032 26935 10 Skin 0.07 protein_coding missense_variant MODERATE 244T>A Leu82Met
M0058445 IJGONIID_00033 28080 8 Skin 0.06 protein_coding missense_variant MODERATE 124T>G Ser42Ala
M0058446 IJGONIID_00034 28875 6 Skin 0.04 protein_coding missense_variant MODERATE 217T>G Ser73Ala
M0058447 IJGONIID_00035 29100 5 Skin 0.04 protein_coding synonymous_variant LOW 78T>C Pro26Pro
M0058448 IJGONIID_00036 30008 4 Skin 0.03 protein_coding synonymous_variant LOW 75A>G Lys25Lys
M0058449 IJGONIID_00036 30200 4 Skin 0.03 protein_coding synonymous_variant LOW 267A>G Pro89Pro
M0058450 IJGONIID_00036 30215 3 Skin 0.02 protein_coding synonymous_variant LOW 282A>G Glu94Glu
M0058451 IJGONIID_00036 30221 4 Skin 0.03 protein_coding synonymous_variant LOW 288C>T Leu96Leu
M0058452 IJGONIID_00036 30240 3 Skin 0.02 protein_coding missense_variant MODERATE 307C>G Pro103Ala
M0058453 IJGONIID_00036 30242 3 Skin 0.02 protein_coding synonymous_variant LOW 309G>T Pro103Pro
M0058454 IJGONIID_00036 30245 3 Skin 0.02 protein_coding synonymous_variant LOW 312C>T Ala104Ala
M0058455 IJGONIID_00036 30249 3 Skin 0.02 protein_coding missense_variant MODERATE 316C>A His106Asn
M0058456 IJGONIID_00036 30304 3 Skin 0.02 protein_coding missense_variant MODERATE 371C>A Ala124Glu
M0058457 IJGONIID_00036 30305 3 Skin 0.02 protein_coding synonymous_variant LOW 372A>G Ala124Ala
M0058458 IJGONIID_00040 32676 3 Skin 0.02 protein_coding missense_variant MODERATE 559T>C Tyr187His
M0058459 IJGONIID_00041 33176 5 Skin 0.04 protein_coding missense_variant MODERATE 244A>G Ser82Gly
M0058460 IJGONIID_00041 33177 5 Skin 0.04 protein_coding missense_variant MODERATE 245G>C Ser82Thr
M0058461 IJGONIID_00047 37035 4 Skin 0.03 protein_coding synonymous_variant LOW 177A>G Gly59Gly
M0058462 IJGONIID_00058 47294 7 Skin 0.05 protein_coding missense_variant MODERATE 912C>A Asn304Lys
M0058463 IJGONIID_00058 47387 5 Skin 0.04 protein_coding synonymous_variant LOW 1005T>C Phe335Phe
M0058464 IJGONIID_00060 52285 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3349C>T None
M0058465 IJGONIID_00060 52295 4 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3359T>G None
M0058466 IJGONIID_00049 39811 5 Skin 0.04 protein_coding missense_variant MODERATE 2140G>A Asp714Asn
M0058467 IJGONIID_00049 40653 3 Skin 0.02 protein_coding synonymous_variant LOW 2982C>G Gly994Gly
M0058468 IJGONIID_00051 41617 4 Skin 0.03 protein_coding synonymous_variant LOW 225C>T Ala75Ala
M0058469 IJGONIID_00051 41929 6 Skin 0.04 protein_coding synonymous_variant LOW 537G>A Val179Val
M0058470 IJGONIID_00003 1440 3 Skin 0.02 protein_coding synonymous_variant LOW 3G>A Val1Val
M0058471 IJGONIID_00002 2288 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -893C>T None
M0058472 IJGONIID_00058 47569 3 Skin 0.02 protein_coding missense_variant MODERATE 1187C>A Ala396Asp
M0058473 IJGONIID_00006 3015 4 Skin 0.03 protein_coding synonymous_variant LOW 618C>T His206His
M0058474 IJGONIID_00006 3016 4 Skin 0.03 protein_coding missense_variant MODERATE 617A>G His206Arg
M0058475 IJGONIID_00006 3205 3 Skin 0.02 protein_coding missense_variant MODERATE 428G>A Arg143His
M0058476 IJGONIID_00030 25309 4 Skin 0.03 protein_coding synonymous_variant LOW 966T>C Val322Val
M0058477 IJGONIID_00030 25312 4 Skin 0.03 protein_coding synonymous_variant LOW 963T>C Asn321Asn
M0058478 IJGONIID_00030 25324 4 Skin 0.03 protein_coding synonymous_variant LOW 951T>C Asp317Asp
M0058479 IJGONIID_00030 25330 4 Skin 0.03 protein_coding synonymous_variant LOW 945G>C Thr315Thr
M0058480 IJGONIID_00030 25336 4 Skin 0.03 protein_coding synonymous_variant LOW 939T>C Arg313Arg
M0058481 IJGONIID_00030 25342 4 Skin 0.03 protein_coding synonymous_variant LOW 933T>C Ala311Ala
M0058482 IJGONIID_00031 26387 4 Skin 0.03 protein_coding missense_variant MODERATE 523T>C Phe175Leu
M0058483 IJGONIID_00031 26389 4 Skin 0.03 protein_coding missense_variant MODERATE 521T>C Leu174Pro
M0058484 IJGONIID_00031 26853 5 Skin 0.04 protein_coding synonymous_variant LOW 57C>T Asp19Asp
M0058485 IJGONIID_00031 26859 4 Skin 0.03 protein_coding synonymous_variant LOW 51C>T Gly17Gly
M0058486 IJGONIID_00006 3042 5 Skin 0.04 protein_coding synonymous_variant LOW 591G>A Leu197Leu
M0058487 IJGONIID_00005 2409 3 Skin 0.02 protein_coding synonymous_variant LOW 357T>C Gly119Gly
M0058488 IJGONIID_00005 2490 3 Skin 0.02 protein_coding synonymous_variant LOW 276G>A Glu92Glu
M0058489 IJGONIID_00006 2985 3 Skin 0.02 protein_coding synonymous_variant LOW 648C>T Asp216Asp
M0058490 IJGONIID_00006 3033 3 Skin 0.02 protein_coding synonymous_variant LOW 600G>A Glu200Glu
M0058491 IJGONIID_00006 3072 4 Skin 0.03 protein_coding synonymous_variant LOW 561G>A Glu187Glu
M0058492 IJGONIID_00038 31347 4 Skin 0.03 protein_coding synonymous_variant LOW 111C>T Ile37Ile
M0058493 IJGONIID_00037 31051 4 Skin 0.03 protein_coding missense_variant MODERATE 190G>C Ala64Pro
M0058494 IJGONIID_00035 29075 4 Skin 0.03 protein_coding missense_variant MODERATE 53T>C Ile18Thr
M0058495 IJGONIID_00035 29076 4 Skin 0.03 protein_coding synonymous_variant LOW 54C>T Ile18Ile
M0058496 IJGONIID_00035 29182 4 Skin 0.03 protein_coding missense_variant MODERATE 160G>A Ala54Thr
M0058497 IJGONIID_00035 29187 4 Skin 0.03 protein_coding synonymous_variant LOW 165G>A Arg55Arg
M0058498 IJGONIID_00035 29305 4 Skin 0.03 protein_coding synonymous_variant LOW 283T>C Leu95Leu
M0058499 IJGONIID_00033 27358 3 Skin 0.02 protein_coding synonymous_variant LOW 846T>C Gly282Gly
M0058500 IJGONIID_00033 27364 4 Skin 0.03 protein_coding synonymous_variant LOW 840A>C Leu280Leu
M0058501 IJGONIID_00033 27365 4 Skin 0.03 protein_coding missense_variant MODERATE 839T>C Leu280Pro
M0058502 IJGONIID_00033 27383 8 Skin 0.06 protein_coding missense_variant MODERATE 821C>T Ala274Val
M0058503 IJGONIID_00025 18239 3 Skin 0.02 protein_coding synonymous_variant LOW 1065A>C Gly355Gly
M0058504 IJGONIID_00025 18287 4 Skin 0.03 protein_coding synonymous_variant LOW 1017T>C Ser339Ser
M0058505 IJGONIID_00030 25285 3 Skin 0.02 protein_coding synonymous_variant LOW 990T>A Ala330Ala
M0058506 IJGONIID_00035 29439 3 Skin 0.02 protein_coding missense_variant MODERATE 417G>C Glu139Asp
M0058507 IJGONIID_00038 31415 3 Skin 0.02 protein_coding missense_variant MODERATE 43C>T His15Tyr
M0058508 IJGONIID_00021 14446 4 Skin 0.03 protein_coding synonymous_variant LOW 1531C>T Leu511Leu
M0058509 IJGONIID_00021 14844 3 Skin 0.02 protein_coding missense_variant MODERATE 1133A>C Lys378Thr
M0058510 IJGONIID_00036 30285 3 Skin 0.02 protein_coding missense_variant MODERATE 352C>A Leu118Ile
M0058511 IJGONIID_00051 41845 4 Skin 0.03 protein_coding synonymous_variant LOW 453C>T His151His
M0058512 IJGONIID_00058 46894 3 Skin 0.02 protein_coding missense_variant MODERATE 512C>T Thr171Met
M0058513 IJGONIID_00030 24247 5 Skin 0.04 protein_coding synonymous_variant LOW 2028C>T Gly676Gly
M0058514 IJGONIID_00058 47897 4 Skin 0.03 protein_coding missense_variant MODERATE 1515C>A His505Gln
M0058515 IJGONIID_00057 46356 3 Skin 0.02 protein_coding synonymous_variant LOW 291C>T Ser97Ser
M0058516 IJGONIID_00022 16387 4 Skin 0.03 protein_coding missense_variant MODERATE 94A>G Ile32Val
M0058517 IJGONIID_00066 51085 4 Skin 0.03 protein_coding missense_variant MODERATE 55G>A Asp19Asn
M0058518 IJGONIID_00023 16591 3 Skin 0.02 protein_coding synonymous_variant LOW 204G>T Leu68Leu
M0058519 IJGONIID_00025 17839 3 Skin 0.02 protein_coding missense_variant MODERATE 1465G>A Asp489Asn
M0058520 IJGONIID_00025 18395 3 Skin 0.02 protein_coding synonymous_variant LOW 909C>T Ala303Ala
M0058521 IJGONIID_00027 19815 3 Skin 0.02 protein_coding synonymous_variant LOW 147C>T Asn49Asn
M0058522 IJGONIID_00027 19817 3 Skin 0.02 protein_coding missense_variant MODERATE 145A>G Asn49Asp
M0058523 IJGONIID_00027 19824 3 Skin 0.02 protein_coding synonymous_variant LOW 138A>G Glu46Glu
M0058524 IJGONIID_00039 31560 3 Skin 0.02 protein_coding synonymous_variant LOW 30G>A Val10Val
M0058525 IJGONIID_00040 32924 3 Skin 0.02 protein_coding synonymous_variant LOW 807G>A Glu269Glu
M0058526 IJGONIID_00048 37621 4 Skin 0.03 protein_coding synonymous_variant LOW 348A>G Val116Val
M0058527 IJGONIID_00048 37623 4 Skin 0.03 protein_coding missense_variant MODERATE 350G>C Arg117Thr
M0058528 IJGONIID_00048 37624 4 Skin 0.03 protein_coding missense_variant MODERATE 351G>C Arg117Ser
M0058529 IJGONIID_00049 38896 3 Skin 0.02 protein_coding missense_variant MODERATE 1225G>A Gly409Arg
M0058530 IJGONIID_00049 38898 3 Skin 0.02 protein_coding synonymous_variant LOW 1227G>A Gly409Gly
M0058531 IJGONIID_00049 38901 3 Skin 0.02 protein_coding synonymous_variant LOW 1230G>A Ala410Ala
M0058532 IJGONIID_00049 38902 3 Skin 0.02 protein_coding missense_variant MODERATE 1231A>G Thr411Ala
M0058533 IJGONIID_00049 38904 3 Skin 0.02 protein_coding synonymous_variant LOW 1233T>C Thr411Thr
M0058534 IJGONIID_00049 38907 3 Skin 0.02 protein_coding missense_variant MODERATE 1236C>G Asp412Glu
M0058535 IJGONIID_00049 39009 3 Skin 0.02 protein_coding synonymous_variant LOW 1338T>C Asp446Asp
M0058536 IJGONIID_00049 39162 3 Skin 0.02 protein_coding synonymous_variant LOW 1491G>A Pro497Pro
M0058537 IJGONIID_00049 39163 3 Skin 0.02 protein_coding missense_variant MODERATE 1492T>G Ser498Ala
M0058538 IJGONIID_00049 39168 3 Skin 0.02 protein_coding synonymous_variant LOW 1497G>A Leu499Leu
M0058539 IJGONIID_00049 39225 4 Skin 0.03 protein_coding synonymous_variant LOW 1554A>C Ala518Ala
M0058540 IJGONIID_00049 39249 3 Skin 0.02 protein_coding synonymous_variant LOW 1578T>C Asp526Asp
M0058541 IJGONIID_00049 39267 3 Skin 0.02 protein_coding synonymous_variant LOW 1596G>A Ala532Ala
M0058542 IJGONIID_00049 40272 3 Skin 0.02 protein_coding synonymous_variant LOW 2601C>T Asp867Asp
M0058543 IJGONIID_00050 40866 3 Skin 0.02 protein_coding missense_variant MODERATE 88G>A Gly30Ser
M0058544 IJGONIID_00051 41641 3 Skin 0.02 protein_coding synonymous_variant LOW 249G>A Glu83Glu
M0058545 IJGONIID_00051 42004 3 Skin 0.02 protein_coding synonymous_variant LOW 612C>T Ala204Ala
M0058546 IJGONIID_00051 42010 3 Skin 0.02 protein_coding synonymous_variant LOW 618C>T Ser206Ser
M0058547 IJGONIID_00051 42013 3 Skin 0.02 protein_coding synonymous_variant LOW 621C>G Leu207Leu
M0058548 IJGONIID_00051 42022 3 Skin 0.02 protein_coding synonymous_variant LOW 630G>A Arg210Arg
M0058549 IJGONIID_00051 42028 3 Skin 0.02 protein_coding synonymous_variant LOW 636T>C Asn212Asn
M0058550 IJGONIID_00051 42031 3 Skin 0.02 protein_coding synonymous_variant LOW 639C>G Gly213Gly
M0058551 IJGONIID_00051 42040 3 Skin 0.02 protein_coding synonymous_variant LOW 648T>C Phe216Phe
M0058552 IJGONIID_00051 42043 3 Skin 0.02 protein_coding missense_variant MODERATE 651T>G Asp217Glu
M0058553 IJGONIID_00051 42115 3 Skin 0.02 protein_coding synonymous_variant LOW 723G>C Pro241Pro
M0058554 IJGONIID_00051 42118 3 Skin 0.02 protein_coding synonymous_variant LOW 726C>A Ser242Ser
M0058555 IJGONIID_00051 42163 3 Skin 0.02 protein_coding synonymous_variant LOW 771C>T Gly257Gly
M0058556 IJGONIID_00051 42167 3 Skin 0.02 protein_coding missense_variant MODERATE 775A>C Lys259Gln






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism
IJGONIID_00018 ARO:3000596 90.5 1.07e-183 1 284 1.0000 1.0000 macrolide antibiotic Erm 23S ribosomal RNA methyltransferase antibiotic target alteration
LCMLLNPD_00018 ARO:3000596 90.5 1.07e-183 1 284 1.0000 1.0000 macrolide antibiotic Erm 23S ribosomal RNA methyltransferase antibiotic target alteration






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
IJGONIID_00028 BDE68784.1|GH184 99.8 0 1 450 1 0.9719
IJGONIID_00049 BDE68804.1|CBM50 100 0 1 1036 1 1
LCMLLNPD_00028 BDE68784.1|GH184 99.8 0 1 450 1 0.9719
LCMLLNPD_00049 BDE68804.1|CBM50 100 0 1 1036 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term