| Cluster Information | Plasmid Cluster ID | C98 |
| Reference Plasmid | CP054241.1 | |
| Reference Plasmid Size | 834193 | |
| Reference Plasmid GC Content | 0.51 | |
| Reference Plasmid Mobility Type | non-mobilizable |
| mutid | gname | pos | count | tissue | frequnt | biotype | consequence | impact | nucchange | aachange |
|---|---|---|---|---|---|---|---|---|---|---|
| M0144066 | AJCCHEED_00568 | 513174 | 5 | Gut | 0.20 | protein_coding | missense_variant | MODERATE | 62G>A | Gly21Asp |
| M0144067 | AJCCHEED_00571 | 514679 | 3 | Gut | 0.12 | protein_coding | synonymous_variant | LOW | 606A>G | Thr202Thr |
| M0144068 | AJCCHEED_00571 | 515263 | 3 | Gut | 0.12 | protein_coding | missense_variant | MODERATE | 1190A>G | His397Arg |
| Gene Name | vf_gene_id | vf_name | identity | evalue | qstart | qend | query_coverage | subject_coverage | vf_category | gene_description | condition |
|---|---|---|---|---|---|---|---|---|---|---|---|
| IJOJLDHM_00114 | VFG013418 | LOS | 74.9 | 1.4e-79 | 1 | 187 | 0.8821 | 0.9639 | Immune modulation | phosphoheptose isomerase | experiment |
| IJOJLDHM_00162 | VFG013374 | LOS | 70.6 | 8.4e-115 | 3 | 286 | 0.9827 | 0.8328 | Immune modulation | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase | experiment |
| IJOJLDHM_00265 | VFG013412 | LOS | 77.3 | 1.1e-136 | 1 | 304 | 0.9967 | 0.9967 | Immune modulation | UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase | experiment |
| IJOJLDHM_00465 | VFG000879 | Type 1 fimbriae | 98.7 | 2.3e-168 | 1 | 300 | 1.0 | 1 | Adherence | FimH protein precursor | experiment |
| IJOJLDHM_00466 | VFG000878 | Type 1 fimbriae | 98.2 | 6.2e-86 | 1 | 167 | 1.0 | 1 | Adherence | FimG protein precursor | experiment |
| IJOJLDHM_00467 | VFG000877 | Type 1 fimbriae | 96.6 | 5e-94 | 1 | 176 | 1.0 | 1 | Adherence | FimF protein precursor | experiment |
| IJOJLDHM_00468 | VFG000876 | Type 1 fimbriae | 99.1 | 0 | 1 | 878 | 1.0 | 1 | Adherence | Outer membrane usher protein fimD precursor | experiment |
| IJOJLDHM_00471 | VFG000874 | Type 1 fimbriae | 98.2 | 6.1e-94 | 1 | 165 | 1.0 | 0.9218 | Adherence | Fimbrin-like protein fimI precursor | experiment |
| IJOJLDHM_00472 | VFG000873 | Type 1 fimbriae | 90.1 | 1e-81 | 1 | 182 | 1.0 | 1 | Adherence | Type-1 fimbrial protein, A chain precursor | experiment |
| IJOJLDHM_00473 | VFG000872 | Type 1 fimbriae | 100 | 4.9e-114 | 1 | 198 | 1.0 | 1 | Adherence | Type 1 fimbriae Regulatory protein fimE | experiment |
| IJOJLDHM_00740 | VFG001855 | Hsp60 | 75.2 | 3.8e-225 | 1 | 548 | 1.0 | 0.9982 | Adherence | Hsp60, 60K heat shock protein HtpB | experiment |
| IJOJLDHM_00789 | VFG052340 | PmrAB | 91.4 | 1.7e-115 | 1 | 222 | 1.0 | 1 | Regulation | response regulator PmrA | experiment |
| IJOJLDHM_00790 | VFG052339 | PmrAB | 85.6 | 2e-169 | 4 | 358 | 0.9699 | 0.9972 | Regulation | sensory kinase PmrB | experiment |
| AJCCHEED_00114 | VFG013418 | LOS | 74.9 | 1.4e-79 | 1 | 187 | 0.8821 | 0.9639 | Immune modulation | phosphoheptose isomerase | experiment |
| AJCCHEED_00162 | VFG013374 | LOS | 70.6 | 8.4e-115 | 3 | 286 | 0.9827 | 0.8328 | Immune modulation | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase | experiment |
| AJCCHEED_00265 | VFG013412 | LOS | 77.3 | 1.1e-136 | 1 | 304 | 0.9967 | 0.9967 | Immune modulation | UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase | experiment |
| AJCCHEED_00465 | VFG000879 | Type 1 fimbriae | 98.7 | 2.3e-168 | 1 | 300 | 1.0 | 1 | Adherence | FimH protein precursor | experiment |
| AJCCHEED_00466 | VFG000878 | Type 1 fimbriae | 98.2 | 6.2e-86 | 1 | 167 | 1.0 | 1 | Adherence | FimG protein precursor | experiment |
| AJCCHEED_00467 | VFG000877 | Type 1 fimbriae | 96.6 | 5e-94 | 1 | 176 | 1.0 | 1 | Adherence | FimF protein precursor | experiment |
| AJCCHEED_00468 | VFG000876 | Type 1 fimbriae | 99.1 | 0 | 1 | 878 | 1.0 | 1 | Adherence | Outer membrane usher protein fimD precursor | experiment |
| AJCCHEED_00471 | VFG000874 | Type 1 fimbriae | 98.2 | 6.1e-94 | 1 | 165 | 1.0 | 0.9218 | Adherence | Fimbrin-like protein fimI precursor | experiment |
| AJCCHEED_00472 | VFG000873 | Type 1 fimbriae | 90.1 | 1e-81 | 1 | 182 | 1.0 | 1 | Adherence | Type-1 fimbrial protein, A chain precursor | experiment |
| AJCCHEED_00473 | VFG000872 | Type 1 fimbriae | 100 | 4.9e-114 | 1 | 198 | 1.0 | 1 | Adherence | Type 1 fimbriae Regulatory protein fimE | experiment |
| AJCCHEED_00740 | VFG001855 | Hsp60 | 75.2 | 3.8e-225 | 1 | 548 | 1.0 | 0.9982 | Adherence | Hsp60, 60K heat shock protein HtpB | experiment |
| AJCCHEED_00789 | VFG052340 | PmrAB | 91.4 | 1.7e-115 | 1 | 222 | 1.0 | 1 | Regulation | response regulator PmrA | experiment |
| AJCCHEED_00790 | VFG052339 | PmrAB | 85.6 | 2e-169 | 4 | 358 | 0.9699 | 0.9972 | Regulation | sensory kinase PmrB | experiment |
| IJOJLDHM_00075 | VFG043233 | Lateral flagella | 70.1 | 3.9e-129 | 14 | 366 | 0.9645 | 0.9289 | Others | flagellar basal body P-ring protein FlgI | prediction |
| IJOJLDHM_00095 | VFG043225 | Lateral flagella | 73.7 | 5.8e-183 | 1 | 438 | 0.9821 | 0.9821 | Others | flagellar protein export ATPase FliI | prediction |
| IJOJLDHM_00114 | VFG013422 | LOS | 75.4 | 6.3e-79 | 1 | 187 | 0.8821 | 0.9639 | Immune modulation | phosphoheptose isomerase | prediction |
| IJOJLDHM_00159 | VFG013167 | LOS | 72.9 | 5e-110 | 1 | 262 | 1.0 | 1 | Immune modulation | UDP-N-acetylglucosamine acyltransferase | prediction |
| IJOJLDHM_00162 | VFG013165 | LOS | 72.3 | 6.1e-117 | 3 | 285 | 0.9792 | 0.8299 | Immune modulation | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase | prediction |
| IJOJLDHM_00250 | VFG036078 | Colicin-like Usp | 100 | 0 | 1 | 593 | 1.0 | 1 | Exotoxin | type VI secretion system tube protein Hcp | prediction |
| IJOJLDHM_00255 | VFG045937 | Hemorrhagic E.coli pilus (HCP) | 100 | 6.7e-80 | 1 | 146 | 1.0 | 1 | Adherence | prepilin peptidase-dependent pilin | prediction |
| IJOJLDHM_00256 | VFG045998 | Hemorrhagic E.coli pilus (HCP) | 100 | 7.5e-216 | 1 | 379 | 1.0 | 1 | Adherence | type II secretion system protein GspE | prediction |
| IJOJLDHM_00257 | VFG046014 | Hemorrhagic E.coli pilus (HCP) | 100 | 9.3e-225 | 1 | 400 | 1.0 | 1 | Adherence | protein transport protein HofC | prediction |
| IJOJLDHM_00265 | VFG013414 | LOS | 77.3 | 6.2e-136 | 1 | 304 | 0.9967 | 0.9967 | Immune modulation | UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase | prediction |
| IJOJLDHM_00465 | VFG033366 | Type 1 fimbriae | 100 | 8.4e-170 | 1 | 300 | 1.0 | 1 | Adherence | FimH protein precursor | prediction |
| IJOJLDHM_00466 | VFG033343 | Type 1 fimbriae | 100 | 1.1e-86 | 1 | 167 | 1.0 | 1 | Adherence | FimG protein precursor | prediction |
| IJOJLDHM_00467 | VFG033315 | Type 1 fimbriae | 100 | 1e-95 | 1 | 176 | 1.0 | 1 | Adherence | FimF protein precursor | prediction |
| IJOJLDHM_00468 | VFG033288 | Type 1 fimbriae | 100 | 0 | 1 | 878 | 1.0 | 1 | Adherence | Outer membrane usher protein fimD precursor | prediction |
| IJOJLDHM_00471 | VFG012284 | Type 1 fimbriae | 100 | 1.1e-94 | 1 | 165 | 1.0 | 0.9218 | Adherence | Fimbrin-like protein fimI precursor | prediction |
| IJOJLDHM_00472 | VFG033211 | Type 1 fimbriae | 100 | 1.8e-90 | 1 | 182 | 1.0 | 1 | Adherence | Type-1 fimbrial protein, A chain precursor | prediction |
| IJOJLDHM_00473 | VFG000872 | Type 1 fimbriae | 100 | 3.6e-113 | 1 | 198 | 1.0 | 1 | Adherence | Type 1 fimbriae Regulatory protein fimE | prediction |
| IJOJLDHM_00740 | VFG045692 | Hsp60 | 74.8 | 2e-225 | 1 | 548 | 1.0 | 0.9946 | Adherence | Hsp60, 60K heat shock protein HtpB | prediction |
| IJOJLDHM_00789 | VFG052340 | PmrAB | 91.4 | 1.3e-114 | 1 | 222 | 1.0 | 1 | Regulation | response regulator PmrA | prediction |
| IJOJLDHM_00790 | VFG052339 | PmrAB | 85.6 | 1.5e-168 | 4 | 358 | 0.9699 | 0.9972 | Regulation | sensory kinase PmrB | prediction |
| AJCCHEED_00075 | VFG043233 | Lateral flagella | 70.1 | 3.9e-129 | 14 | 366 | 0.9645 | 0.9289 | Others | flagellar basal body P-ring protein FlgI | prediction |
| AJCCHEED_00095 | VFG043225 | Lateral flagella | 73.7 | 5.8e-183 | 1 | 438 | 0.9821 | 0.9821 | Others | flagellar protein export ATPase FliI | prediction |
| AJCCHEED_00114 | VFG013422 | LOS | 75.4 | 6.3e-79 | 1 | 187 | 0.8821 | 0.9639 | Immune modulation | phosphoheptose isomerase | prediction |
| AJCCHEED_00159 | VFG013167 | LOS | 72.9 | 5e-110 | 1 | 262 | 1.0 | 1 | Immune modulation | UDP-N-acetylglucosamine acyltransferase | prediction |
| AJCCHEED_00162 | VFG013165 | LOS | 72.3 | 6.1e-117 | 3 | 285 | 0.9792 | 0.8299 | Immune modulation | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase | prediction |
| AJCCHEED_00250 | VFG036078 | Colicin-like Usp | 100 | 0 | 1 | 593 | 1.0 | 1 | Exotoxin | type VI secretion system tube protein Hcp | prediction |
| AJCCHEED_00255 | VFG045937 | Hemorrhagic E.coli pilus (HCP) | 100 | 6.7e-80 | 1 | 146 | 1.0 | 1 | Adherence | prepilin peptidase-dependent pilin | prediction |
| AJCCHEED_00256 | VFG045998 | Hemorrhagic E.coli pilus (HCP) | 100 | 7.5e-216 | 1 | 379 | 1.0 | 1 | Adherence | type II secretion system protein GspE | prediction |
| AJCCHEED_00257 | VFG046014 | Hemorrhagic E.coli pilus (HCP) | 100 | 9.3e-225 | 1 | 400 | 1.0 | 1 | Adherence | protein transport protein HofC | prediction |
| AJCCHEED_00265 | VFG013414 | LOS | 77.3 | 6.2e-136 | 1 | 304 | 0.9967 | 0.9967 | Immune modulation | UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase | prediction |
| AJCCHEED_00465 | VFG033366 | Type 1 fimbriae | 100 | 8.4e-170 | 1 | 300 | 1.0 | 1 | Adherence | FimH protein precursor | prediction |
| AJCCHEED_00466 | VFG033343 | Type 1 fimbriae | 100 | 1.1e-86 | 1 | 167 | 1.0 | 1 | Adherence | FimG protein precursor | prediction |
| AJCCHEED_00467 | VFG033315 | Type 1 fimbriae | 100 | 1e-95 | 1 | 176 | 1.0 | 1 | Adherence | FimF protein precursor | prediction |
| AJCCHEED_00468 | VFG033288 | Type 1 fimbriae | 100 | 0 | 1 | 878 | 1.0 | 1 | Adherence | Outer membrane usher protein fimD precursor | prediction |
| AJCCHEED_00471 | VFG012284 | Type 1 fimbriae | 100 | 1.1e-94 | 1 | 165 | 1.0 | 0.9218 | Adherence | Fimbrin-like protein fimI precursor | prediction |
| AJCCHEED_00472 | VFG033211 | Type 1 fimbriae | 100 | 1.8e-90 | 1 | 182 | 1.0 | 1 | Adherence | Type-1 fimbrial protein, A chain precursor | prediction |
| AJCCHEED_00473 | VFG000872 | Type 1 fimbriae | 100 | 3.6e-113 | 1 | 198 | 1.0 | 1 | Adherence | Type 1 fimbriae Regulatory protein fimE | prediction |
| AJCCHEED_00740 | VFG045692 | Hsp60 | 74.8 | 2e-225 | 1 | 548 | 1.0 | 0.9946 | Adherence | Hsp60, 60K heat shock protein HtpB | prediction |
| AJCCHEED_00789 | VFG052340 | PmrAB | 91.4 | 1.3e-114 | 1 | 222 | 1.0 | 1 | Regulation | response regulator PmrA | prediction |
| AJCCHEED_00790 | VFG052339 | PmrAB | 85.6 | 1.5e-168 | 4 | 358 | 0.9699 | 0.9972 | Regulation | sensory kinase PmrB | prediction |
| Gene Name | compound | identity | evalue | qstart | qend | query_coverage | subject_coverage | group |
|---|---|---|---|---|---|---|---|---|
| IJOJLDHM_00142 | Copper (Cu) | 97 | 3.9e-134 | 1 | 236 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00234 | Copper (Cu) | 99 | 3.1e-309 | 1 | 516 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00311 | n-hexane [class: Alkane] | 99.1 | 0 | 1 | 784 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00315 | Cobalt (Co), Magnesium (Mg) | 94.4 | 1.4e-66 | 1 | 125 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00383 | Silver (Ag), Mercury (Hg), Cadmium (Cd), Cyclohexane [class: Cycloalkane], Pentane [class: Alkane], n-hexane [class: Alkane], Diphenyl Ether [class: Phenyl] | 100 | 6.9e-173 | 1 | 289 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00445 | Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 97.1 | 1.8e-222 | 1 | 410 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00561 | Nickel (Ni), Cobalt (Co) | 100 | 3.7e-146 | 1 | 255 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00734 | Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] | 100 | 2.4e-51 | 1 | 105 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00746 | Copper (Cu) | 99.1 | 5.2e-60 | 1 | 112 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00826 | Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 98.8 | 6e-184 | 1 | 343 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00851 | Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] | 99.5 | 1.3e-302 | 1 | 549 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00858 | Methyl Viologen [class: Paraquat] | 99.4 | 1.3e-85 | 1 | 154 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00859 | Zinc (Zn), Cyclohexane [class: Cycloalkane] | 100 | 5.5e-59 | 1 | 107 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00142 | Copper (Cu) | 97 | 3.9e-134 | 1 | 236 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00234 | Copper (Cu) | 99 | 3.1e-309 | 1 | 516 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00311 | n-hexane [class: Alkane] | 99.1 | 0 | 1 | 784 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00315 | Cobalt (Co), Magnesium (Mg) | 94.4 | 1.4e-66 | 1 | 125 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00383 | Silver (Ag), Mercury (Hg), Cadmium (Cd), Cyclohexane [class: Cycloalkane], Pentane [class: Alkane], n-hexane [class: Alkane], Diphenyl Ether [class: Phenyl] | 100 | 6.9e-173 | 1 | 289 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00445 | Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 97.1 | 1.8e-222 | 1 | 410 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00561 | Nickel (Ni), Cobalt (Co) | 100 | 3.7e-146 | 1 | 255 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00734 | Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] | 100 | 2.4e-51 | 1 | 105 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00746 | Copper (Cu) | 99.1 | 5.2e-60 | 1 | 112 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00826 | Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 98.8 | 6e-184 | 1 | 343 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00851 | Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] | 99.5 | 1.3e-302 | 1 | 549 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00858 | Methyl Viologen [class: Paraquat] | 99.4 | 1.3e-85 | 1 | 154 | 1.0000 | 1.0000 | experiment |
| AJCCHEED_00859 | Zinc (Zn), Cyclohexane [class: Cycloalkane] | 100 | 5.5e-59 | 1 | 107 | 1.0000 | 1.0000 | experiment |
| IJOJLDHM_00142 | Copper (Cu) | 100 | 6e-136 | 1 | 236 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00234 | Copper (Cu) | 100 | 9.00000000000002e-310 | 1 | 516 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00311 | n-hexane [class: Alkane] | 100 | 0 | 1 | 784 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00315 | Cobalt (Co), Magnesium (Mg) | 100 | 2.9e-68 | 1 | 125 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00383 | Silver (Ag), Mercury (Hg), Cadmium (Cd), Cyclohexane [class: Cycloalkane], Pentane [class: Alkane], n-hexane [class: Alkane], Diphenyl Ether [class: Phenyl] | 100 | 1.6e-170 | 1 | 289 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00445 | Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 99.8 | 1.9e-225 | 1 | 410 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00561 | Nickel (Ni), Cobalt (Co) | 100 | 8.5e-144 | 1 | 255 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00745 | Copper (Cu) | 100 | 6.8e-202 | 1 | 389 | 0.8984 | 0.7811 | prediction |
| IJOJLDHM_00746 | Copper (Cu) | 100 | 3.1e-58 | 1 | 112 | 1.0000 | 0.9825 | prediction |
| IJOJLDHM_00789 | Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine] | 100 | 6.5e-124 | 1 | 222 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00790 | Iron (Fe) | 99.2 | 4.6e-199 | 1 | 366 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00826 | Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 100 | 5.6e-183 | 1 | 343 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00851 | Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] | 100 | 2.1e-301 | 1 | 549 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00858 | Methyl Viologen [class: Paraquat] | 100 | 4.6e-84 | 1 | 154 | 1.0000 | 1.0000 | prediction |
| IJOJLDHM_00859 | Zinc (Zn), Cyclohexane [class: Cycloalkane] | 100 | 1.3e-56 | 1 | 107 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00142 | Copper (Cu) | 100 | 6e-136 | 1 | 236 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00234 | Copper (Cu) | 100 | 9.00000000000002e-310 | 1 | 516 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00311 | n-hexane [class: Alkane] | 100 | 0 | 1 | 784 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00315 | Cobalt (Co), Magnesium (Mg) | 100 | 2.9e-68 | 1 | 125 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00383 | Silver (Ag), Mercury (Hg), Cadmium (Cd), Cyclohexane [class: Cycloalkane], Pentane [class: Alkane], n-hexane [class: Alkane], Diphenyl Ether [class: Phenyl] | 100 | 1.6e-170 | 1 | 289 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00445 | Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 99.8 | 1.9e-225 | 1 | 410 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00561 | Nickel (Ni), Cobalt (Co) | 100 | 8.5e-144 | 1 | 255 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00745 | Copper (Cu) | 100 | 6.8e-202 | 1 | 389 | 0.8984 | 0.7811 | prediction |
| AJCCHEED_00746 | Copper (Cu) | 100 | 3.1e-58 | 1 | 112 | 1.0000 | 0.9825 | prediction |
| AJCCHEED_00789 | Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine] | 100 | 6.5e-124 | 1 | 222 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00790 | Iron (Fe) | 99.2 | 4.6e-199 | 1 | 366 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00826 | Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 100 | 5.6e-183 | 1 | 343 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00851 | Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] | 100 | 2.1e-301 | 1 | 549 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00858 | Methyl Viologen [class: Paraquat] | 100 | 4.6e-84 | 1 | 154 | 1.0000 | 1.0000 | prediction |
| AJCCHEED_00859 | Zinc (Zn), Cyclohexane [class: Cycloalkane] | 100 | 1.3e-56 | 1 | 107 | 1.0000 | 1.0000 | prediction |
| Gene Name | aro_accession | identity | evalue | qstart | qend | query_coverage | subject_coverage | drug_class | amr_gene_family | resistance_mechanism |
|---|---|---|---|---|---|---|---|---|---|---|
| IJOJLDHM_00278 | ARO:3007421 | 93.7 | 0 | 1 | 588 | 1.0000 | 1.0000 | cephalosporin | Penicillin-binding protein mutations conferring resistance to beta-lactam antibiotics | antibiotic target alteration |
| IJOJLDHM_00285 | ARO:3003843 | 100 | 6.38e-232 | 1 | 314 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IJOJLDHM_00311 | ARO:3005059 | 82.1 | 0 | 1 | 784 | 1.0026 | 1.0051 | carbapenem | ATP-binding cassette (ABC) antibiotic efflux pump | antibiotic efflux |
| IJOJLDHM_00445 | ARO:3001214 | 97.3 | 1.45e-281 | 1 | 409 | 0.9976 | 0.9976 | fluoroquinolone antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IJOJLDHM_00732 | ARO:3006880 | 99.1 | 5.56e-242 | 1 | 334 | 1.0000 | 0.8859 | cephalosporin | EC beta-lactamase | antibiotic inactivation |
| IJOJLDHM_00788 | ARO:3003576 | 96.5 | 0 | 1 | 547 | 1.0000 | 1.0000 | peptide antibiotic | pmr phosphoethanolamine transferase | antibiotic target alteration |
| IJOJLDHM_00826 | ARO:3003548 | 98.8 | 3e-231 | 1 | 343 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IJOJLDHM_00827 | ARO:3003549 | 98.4 | 0 | 1 | 683 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IJOJLDHM_00828 | ARO:3003550 | 98.2 | 0 | 1 | 488 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IJOJLDHM_00858 | ARO:3003381 | 99.4 | 1.7e-109 | 1 | 154 | 1.0000 | 1.0000 | fluoroquinolone antibiotic | ATP-binding cassette (ABC) antibiotic efflux pump | antibiotic target alteration |
| IJOJLDHM_00859 | ARO:3003511 | 100 | 1.52e-76 | 1 | 107 | 1.0000 | 1.0000 | fluoroquinolone antibiotic | ATP-binding cassette (ABC) antibiotic efflux pump | antibiotic target alteration |
| AJCCHEED_00278 | ARO:3007421 | 93.7 | 0 | 1 | 588 | 1.0000 | 1.0000 | cephalosporin | Penicillin-binding protein mutations conferring resistance to beta-lactam antibiotics | antibiotic target alteration |
| AJCCHEED_00285 | ARO:3003843 | 100 | 6.38e-232 | 1 | 314 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| AJCCHEED_00311 | ARO:3005059 | 82.1 | 0 | 1 | 784 | 1.0026 | 1.0051 | carbapenem | ATP-binding cassette (ABC) antibiotic efflux pump | antibiotic efflux |
| AJCCHEED_00445 | ARO:3001214 | 97.3 | 1.45e-281 | 1 | 409 | 0.9976 | 0.9976 | fluoroquinolone antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| AJCCHEED_00732 | ARO:3006880 | 99.1 | 5.56e-242 | 1 | 334 | 1.0000 | 0.8859 | cephalosporin | EC beta-lactamase | antibiotic inactivation |
| AJCCHEED_00788 | ARO:3003576 | 96.5 | 0 | 1 | 547 | 1.0000 | 1.0000 | peptide antibiotic | pmr phosphoethanolamine transferase | antibiotic target alteration |
| AJCCHEED_00826 | ARO:3003548 | 98.8 | 3e-231 | 1 | 343 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| AJCCHEED_00827 | ARO:3003549 | 98.4 | 0 | 1 | 683 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| AJCCHEED_00828 | ARO:3003550 | 98.2 | 0 | 1 | 488 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| AJCCHEED_00858 | ARO:3003381 | 99.4 | 1.7e-109 | 1 | 154 | 1.0000 | 1.0000 | fluoroquinolone antibiotic | ATP-binding cassette (ABC) antibiotic efflux pump | antibiotic target alteration |
| AJCCHEED_00859 | ARO:3003511 | 100 | 1.52e-76 | 1 | 107 | 1.0000 | 1.0000 | fluoroquinolone antibiotic | ATP-binding cassette (ABC) antibiotic efflux pump | antibiotic target alteration |
| Gene Name | phi_molconn_id | host gene_name | identity | evalue | qstart | qend | query_coverage | subject_coverage | host_descripton | disease_name | function | phenotype_of_mutant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IJOJLDHM_00116 | PHI:2647 | ivy | 100 | 1.8e-86 | 1 | 157 | 1.0000 | 1.0000 | birds | colibacillosis; cellulitis; swollen head syndrome | lysozyme inhibitor | unaffected pathogenicity |
| IJOJLDHM_00142 | PHI:8514 | nlpE | 80.6 | 2.4e-111 | 2 | 233 | 0.9831 | 0.9957 | rodents | colitis | outer-membrane lipoprotein | unaffected pathogenicity |
| IJOJLDHM_00176 | PHI:9334 | map | 89.2 | 1.5e-112 | 1 | 213 | 0.9861 | 0.9886 | rodents | colitis | effector protein | effector (plant avirulence determinant) |
| IJOJLDHM_00177 | PHI:9334 | map | 93.8 | 8.1e-22 | 1 | 48 | 1.0000 | 0.9886 | rodents | colitis | effector protein | effector (plant avirulence determinant) |
| IJOJLDHM_00183 | PHI:8690 | degP (ROD_01651) | 93.7 | 6.5e-188 | 1 | 364 | 1.0000 | 0.7728 | rodents | colitis | periplasmic serine endoprotease DegP-like | loss of pathogenicity |
| IJOJLDHM_00194 | PHI:10989 | fhuD | 99 | 6.9e-172 | 1 | 296 | 1.0000 | 1.0000 | rodents | infection | iron(III) hydroxamate ABC transporter periplasmic binding protein | unaffected pathogenicity |
| IJOJLDHM_00209 | PHI:6508 | DksA | 98.7 | 5.8e-82 | 1 | 151 | 1.0000 | 1.0000 | rodents | salmonellosis | response regulator | reduced virulence |
| IJOJLDHM_00234 | PHI:10985 | cueO | 99 | 5.2e-308 | 1 | 516 | 1.0000 | 1.0000 | rodents | infection | blue copper oxidase | reduced virulence |
| IJOJLDHM_00236 | PHI:9153 | speE | 99.6 | 8.5e-144 | 1 | 242 | 1.0000 | 0.8403 | birds | colibacillosis | polyamine aminopropyltransferase | unaffected pathogenicity |
| IJOJLDHM_00237 | PHI:9152 | speD | 99.6 | 9e-155 | 1 | 264 | 1.0000 | 1.0000 | birds | colibacillosis | S-adenosylmethionine decarboxylase proenzyme | unaffected pathogenicity |
| IJOJLDHM_00245 | PHI:3135 | pdhR | 86.2 | 5.5e-117 | 1 | 253 | 0.9961 | 0.9961 | rodents | gut-associated disease; diarrhea; enteritis; colitis | part of the pyruvate-tricarboxylic acid cycle node | reduced virulence |
| IJOJLDHM_00250 | PHI:7839 | usp | 91.9 | 2.8e-196 | 248 | 593 | 0.5835 | 1.0000 | rodents | neonatal meningitis | uropathogenic specific protein | unaffected pathogenicity |
| IJOJLDHM_00282 | PHI:2672 | fruR | 98.8 | 2.2e-190 | 1 | 334 | 1.0000 | 1.0000 | rodents | food poisoning | regulators of systemic infection | reduced virulence |
| IJOJLDHM_00286 | PHI:8962 | leuA | 92.7 | 7.2e-281 | 1 | 523 | 1.0000 | 1.0000 | rodents | pneumonia | 2-isopropylmalate synthase | reduced virulence |
| IJOJLDHM_00287 | PHI:8862 | LeuB | 89.7 | 3.7e-59 | 1 | 116 | 0.8345 | 0.9449 | rodents | infection | 3-isopropylmalate dehydrogenase | reduced virulence |
| IJOJLDHM_00288 | PHI:8862 | LeuB | 95.6 | 4e-119 | 1 | 227 | 1.0000 | 0.9449 | rodents | infection | 3-isopropylmalate dehydrogenase | reduced virulence |
| IJOJLDHM_00289 | PHI:8964 | leuC | 97.4 | 3.4e-266 | 1 | 466 | 1.0000 | 1.0000 | rodents | pneumonia | 3-isopropylmalate dehydratase large subunit | reduced virulence |
| IJOJLDHM_00290 | PHI:8965 | leuD | 88 | 1.9e-104 | 1 | 200 | 0.9950 | 0.9950 | rodents | pneumonia | 3-isopropylmalate dehydratase small subunit | reduced virulence |
| IJOJLDHM_00293 | PHI:123649 | yabL | 98.2 | 2e-188 | 1 | 327 | 1.0000 | 1.0000 | rodents | neonatal meningitis | regulatory protein | unaffected pathogenicity |
| IJOJLDHM_00311 | PHI:10312 | LptD | 99.1 | 0 | 1 | 784 | 1.0000 | 1.0000 | moths | urinary tract infection | LPS-assembly protein | increased virulence (hypervirulence) |
| IJOJLDHM_00314 | PHI:10573 | rsmA | 79.4 | 1.6e-122 | 1 | 272 | 0.9963 | 1.0000 | monocots | soft rot | ribosomal RNA small subunit methyltransferase A | unaffected pathogenicity |
| IJOJLDHM_00337 | PHI:8577 | carA (Dda3937_01390) | 87.4 | 5.6e-198 | 1 | 380 | 0.9948 | 0.9974 | eudicots | soft rot | carbamoyl-phosphate synthase small subunit | reduced virulence |
| IJOJLDHM_00351 | PHI:3267 | nhaR | 99.3 | 3.7e-173 | 1 | 299 | 1.0000 | 0.9934 | rodents | infection | transcriptional activator protein | reduced virulence |
| IJOJLDHM_00352 | PHI:3266 | nhaA | 98.7 | 5.2e-122 | 1 | 232 | 1.0000 | 0.9974 | rodents | infection | antiporter gene | reduced virulence |
| IJOJLDHM_00353 | PHI:3266 | nhaA | 98.7 | 5e-81 | 1 | 155 | 1.0000 | 0.9974 | rodents | infection | antiporter gene | reduced virulence |
| IJOJLDHM_00366 | PHI:9230 | satP | 100 | 1.6e-28 | 1 | 60 | 0.9231 | 0.8723 | birds | avian colisepticemia | succinate-acetate/proton symporter | unaffected pathogenicity |
| IJOJLDHM_00367 | PHI:9230 | satP | 99 | 6e-54 | 1 | 104 | 1.0000 | 0.8723 | birds | avian colisepticemia | succinate-acetate/proton symporter | unaffected pathogenicity |
| IJOJLDHM_00372 | PHI:11408 | yaaA | 82.9 | 4.9e-121 | 1 | 257 | 0.9961 | 0.8345 | rodents | pneumonia | alanine/glycine transport protein | reduced virulence |
| IJOJLDHM_00378 | PHI:6532 | arcA | 100 | 9.9e-137 | 1 | 238 | 1.0000 | 1.0000 | birds | meningitis | aerobic respiration control protein | reduced virulence |
| IJOJLDHM_00381 | PHI:11268 | creB | 84.6 | 1.3e-110 | 1 | 228 | 0.8803 | 0.9956 | rodents | infection | response regulator in two-component regulatory system | reduced virulence |
| IJOJLDHM_00430 | PHI:6981 | tsr | 87 | 1.8e-253 | 1 | 554 | 1.0000 | 1.0000 | primates | salmonellosis | methyl-accepting chemotaxis protein | reduced virulence |
| IJOJLDHM_00431 | PHI:7575 | yjiY | 96.5 | 0 | 1 | 716 | 1.0000 | 1.0000 | rodents | salmonellosis | peptide-utilizing carbon starvation protein | reduced virulence |
| IJOJLDHM_00465 | PHI:2690 | FimH | 99.3 | 7.3e-169 | 1 | 300 | 1.0000 | 1.0000 | rodents | Crohn's disease | adhesion | reduced virulence |
| IJOJLDHM_00466 | PHI:123639 | fimG | 98.2 | 4.7e-85 | 1 | 167 | 1.0000 | 1.0000 | rodents | neonatal meningitis | fimbrial protein | reduced virulence |
| IJOJLDHM_00471 | PHI:10208 | fimI | 74.8 | 3.1e-73 | 3 | 165 | 0.9879 | 0.9157 | rodents | pneumonia | pilin (type 1 fimbria component protein) | unaffected pathogenicity |
| IJOJLDHM_00472 | PHI:9888 | fimA | 95.1 | 2.1e-86 | 1 | 182 | 1.0000 | 1.0000 | primates | infection | major type 1 subunit fimbrin (pilin) | unaffected pathogenicity |
| IJOJLDHM_00553 | PHI:8004 | fecI | 100 | 1e-49 | 1 | 96 | 0.8000 | 0.8844 | even-toed ungulates | bovine mastitis | RNA polymerase sigma factor | reduced virulence |
| IJOJLDHM_00554 | PHI:8004 | fecI | 100 | 1e-26 | 1 | 57 | 1.0000 | 0.8844 | even-toed ungulates | bovine mastitis | RNA polymerase sigma factor | reduced virulence |
| IJOJLDHM_00555 | PHI:8005 | fecR | 99.7 | 5.1e-181 | 1 | 317 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fec operon regulator | reduced virulence |
| IJOJLDHM_00556 | PHI:8006 | fecA | 99.6 | 0 | 1 | 774 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | ferric citrate outer membrane transporter | reduced virulence |
| IJOJLDHM_00557 | PHI:8007 | fecB | 99.3 | 2.4e-164 | 1 | 300 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate-binding periplasmic protein | reduced virulence |
| IJOJLDHM_00558 | PHI:8008 | fecC | 100 | 1.8e-181 | 1 | 332 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport system permease protein | reduced virulence |
| IJOJLDHM_00559 | PHI:8009 | fecD | 92.5 | 2.3e-48 | 1 | 107 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport system permease protein | reduced virulence |
| IJOJLDHM_00560 | PHI:8009 | fecD | 100 | 3.6e-114 | 1 | 210 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport system permease protein | reduced virulence |
| IJOJLDHM_00561 | PHI:8010 | fecE | 100 | 6.2e-145 | 1 | 255 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport ATP-binding protein | reduced virulence |
| IJOJLDHM_00654 | PHI:7020 | cpdB | 99.5 | 0 | 1 | 647 | 1.0000 | 1.0000 | birds | colibacillosis | 2′,3′-cyclic phosphodiesterase | reduced virulence |
| IJOJLDHM_00705 | PHI:12252 | nsrR | 77.3 | 5.1e-56 | 1 | 141 | 1.0000 | 0.9456 | monocots | Stewart's wilt; leaf blight (maize) | DNA-binding transcriptional regulator | unaffected pathogenicity |
| IJOJLDHM_00706 | PHI:2625 | purA | 99.3 | 5.8e-252 | 1 | 432 | 1.0000 | 1.0000 | rodents | food poisoning | pathogenicity island | reduced virulence |
| IJOJLDHM_00711 | PHI:2687 | hfq | 94.1 | 1.4e-47 | 1 | 102 | 1.0000 | 1.0000 | rodents | food poisoning | regulators of systemic infection | reduced virulence |
| IJOJLDHM_00728 | PHI:2960 | frdA | 85 | 5.5e-309 | 1 | 602 | 1.0000 | 1.0000 | bony fishes | enteric septicemia | fumarate reductase | reduced virulence |
| IJOJLDHM_00732 | PHI:6133 | blaCMY-2 | 77.8 | 2.4e-160 | 1 | 334 | 1.0000 | 0.8766 | rodents | salmonellosis | beta-lactamase | reduced virulence |
| IJOJLDHM_00736 | PHI:6420 | EF-P | 98.9 | 4.2e-106 | 1 | 188 | 1.0000 | 1.0000 | rodents | salmonellosis | elongation factor | increased virulence (hypervirulence) |
| IJOJLDHM_00745 | PHI:123643 | dcuA | 100 | 1.4e-229 | 1 | 433 | 1.0000 | 1.0000 | rodents | neonatal meningitis | regulatory protein | unaffected pathogenicity |
| IJOJLDHM_00752 | PHI:11871 | cadB | 84.5 | 3.7e-209 | 1 | 432 | 0.9708 | 0.9752 | primates | edwardsiellosis | lysine-dependent acid resistance (LDAR) system membrane protein | reduced virulence |
| IJOJLDHM_00759 | PHI:9347 | tagC | 98.9 | 1.7e-104 | 1 | 180 | 1.0000 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| IJOJLDHM_00760 | PHI:9347 | tagC | 100 | 1.3e-134 | 1 | 243 | 0.9382 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| IJOJLDHM_00761 | PHI:9347 | tagC | 99.3 | 2.4e-83 | 1 | 152 | 0.7451 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| IJOJLDHM_00762 | PHI:9347 | tagC | 98.9 | 3.3e-48 | 1 | 91 | 0.7647 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| IJOJLDHM_00763 | PHI:9347 | tagC | 96.6 | 3.1e-167 | 1 | 298 | 0.9803 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| IJOJLDHM_00777 | PHI:123638 | DcuR | 88.7 | 1.7e-123 | 1 | 239 | 1.0000 | 1.0000 | birds | pullorum disease | two-component system | increased virulence (hypervirulence) |
| IJOJLDHM_00779 | PHI:10047 | fumB | 93.2 | 5.5e-308 | 1 | 548 | 1.0000 | 1.0000 | rodents | salmonellosis | fumarate hydratase class I | reduced virulence |
| IJOJLDHM_00789 | PHI:4497 | PmrA | 91 | 1.7e-114 | 1 | 222 | 1.0000 | 1.0000 | rodents | salmonellosis | lipopolysaccharide modification regulator | increased virulence (hypervirulence) |
| IJOJLDHM_00838 | PHI:124242 | gltP | 99.5 | 1.5e-231 | 1 | 437 | 1.0000 | 1.0000 | rodents | neonatal meningitis | glutamate transporters | reduced virulence |
| IJOJLDHM_00846 | PHI:10999 | nrfC | 99.1 | 1.6e-133 | 1 | 223 | 1.0000 | 1.0000 | rodents | infection | putative menaquinol-cytochrome c reductase 4Fe-4S subunit | unaffected pathogenicity |
| IJOJLDHM_00849 | PHI:9227 | acs | 99.2 | 0 | 1 | 652 | 1.0000 | 1.0000 | birds | avian colisepticemia | acetyl-coenzyme A synthetase | reduced virulence |
| IJOJLDHM_00850 | PHI:9228 | yjcH | 99 | 1.6e-54 | 1 | 104 | 1.0000 | 1.0000 | birds | avian colisepticemia | conserved inner membrane protein | reduced virulence |
| IJOJLDHM_00851 | PHI:9229 | actP | 99.5 | 2.3e-301 | 1 | 549 | 1.0000 | 1.0000 | birds | avian colisepticemia | acetate/glycolate:cation symporter | reduced virulence |
| IJOJLDHM_00893 | PHI:7661 | pspG | 80 | 9.1e-26 | 1 | 80 | 1.0000 | 1.0000 | rodents | salmonellosis | phage-shock protein | unaffected pathogenicity |
| AJCCHEED_00116 | PHI:2647 | ivy | 100 | 1.8e-86 | 1 | 157 | 1.0000 | 1.0000 | birds | colibacillosis; cellulitis; swollen head syndrome | lysozyme inhibitor | unaffected pathogenicity |
| AJCCHEED_00142 | PHI:8514 | nlpE | 80.6 | 2.4e-111 | 2 | 233 | 0.9831 | 0.9957 | rodents | colitis | outer-membrane lipoprotein | unaffected pathogenicity |
| AJCCHEED_00176 | PHI:9334 | map | 89.2 | 1.5e-112 | 1 | 213 | 0.9861 | 0.9886 | rodents | colitis | effector protein | effector (plant avirulence determinant) |
| AJCCHEED_00177 | PHI:9334 | map | 93.8 | 8.1e-22 | 1 | 48 | 1.0000 | 0.9886 | rodents | colitis | effector protein | effector (plant avirulence determinant) |
| AJCCHEED_00183 | PHI:8690 | degP (ROD_01651) | 93.7 | 6.5e-188 | 1 | 364 | 1.0000 | 0.7728 | rodents | colitis | periplasmic serine endoprotease DegP-like | loss of pathogenicity |
| AJCCHEED_00194 | PHI:10989 | fhuD | 99 | 6.9e-172 | 1 | 296 | 1.0000 | 1.0000 | rodents | infection | iron(III) hydroxamate ABC transporter periplasmic binding protein | unaffected pathogenicity |
| AJCCHEED_00209 | PHI:6508 | DksA | 98.7 | 5.8e-82 | 1 | 151 | 1.0000 | 1.0000 | rodents | salmonellosis | response regulator | reduced virulence |
| AJCCHEED_00234 | PHI:10985 | cueO | 99 | 5.2e-308 | 1 | 516 | 1.0000 | 1.0000 | rodents | infection | blue copper oxidase | reduced virulence |
| AJCCHEED_00236 | PHI:9153 | speE | 99.6 | 8.5e-144 | 1 | 242 | 1.0000 | 0.8403 | birds | colibacillosis | polyamine aminopropyltransferase | unaffected pathogenicity |
| AJCCHEED_00237 | PHI:9152 | speD | 99.6 | 9e-155 | 1 | 264 | 1.0000 | 1.0000 | birds | colibacillosis | S-adenosylmethionine decarboxylase proenzyme | unaffected pathogenicity |
| AJCCHEED_00245 | PHI:3135 | pdhR | 86.2 | 5.5e-117 | 1 | 253 | 0.9961 | 0.9961 | rodents | gut-associated disease; diarrhea; enteritis; colitis | part of the pyruvate-tricarboxylic acid cycle node | reduced virulence |
| AJCCHEED_00250 | PHI:7839 | usp | 91.9 | 2.8e-196 | 248 | 593 | 0.5835 | 1.0000 | rodents | neonatal meningitis | uropathogenic specific protein | unaffected pathogenicity |
| AJCCHEED_00282 | PHI:2672 | fruR | 98.8 | 2.2e-190 | 1 | 334 | 1.0000 | 1.0000 | rodents | food poisoning | regulators of systemic infection | reduced virulence |
| AJCCHEED_00286 | PHI:8962 | leuA | 92.7 | 7.2e-281 | 1 | 523 | 1.0000 | 1.0000 | rodents | pneumonia | 2-isopropylmalate synthase | reduced virulence |
| AJCCHEED_00287 | PHI:8862 | LeuB | 89.7 | 3.7e-59 | 1 | 116 | 0.8345 | 0.9449 | rodents | infection | 3-isopropylmalate dehydrogenase | reduced virulence |
| AJCCHEED_00288 | PHI:8862 | LeuB | 95.6 | 4e-119 | 1 | 227 | 1.0000 | 0.9449 | rodents | infection | 3-isopropylmalate dehydrogenase | reduced virulence |
| AJCCHEED_00289 | PHI:8964 | leuC | 97.4 | 3.4e-266 | 1 | 466 | 1.0000 | 1.0000 | rodents | pneumonia | 3-isopropylmalate dehydratase large subunit | reduced virulence |
| AJCCHEED_00290 | PHI:8965 | leuD | 88 | 1.9e-104 | 1 | 200 | 0.9950 | 0.9950 | rodents | pneumonia | 3-isopropylmalate dehydratase small subunit | reduced virulence |
| AJCCHEED_00293 | PHI:123649 | yabL | 98.2 | 2e-188 | 1 | 327 | 1.0000 | 1.0000 | rodents | neonatal meningitis | regulatory protein | unaffected pathogenicity |
| AJCCHEED_00311 | PHI:10312 | LptD | 99.1 | 0 | 1 | 784 | 1.0000 | 1.0000 | moths | urinary tract infection | LPS-assembly protein | increased virulence (hypervirulence) |
| AJCCHEED_00314 | PHI:10573 | rsmA | 79.4 | 1.6e-122 | 1 | 272 | 0.9963 | 1.0000 | monocots | soft rot | ribosomal RNA small subunit methyltransferase A | unaffected pathogenicity |
| AJCCHEED_00337 | PHI:8577 | carA (Dda3937_01390) | 87.4 | 5.6e-198 | 1 | 380 | 0.9948 | 0.9974 | eudicots | soft rot | carbamoyl-phosphate synthase small subunit | reduced virulence |
| AJCCHEED_00351 | PHI:3267 | nhaR | 99.3 | 3.7e-173 | 1 | 299 | 1.0000 | 0.9934 | rodents | infection | transcriptional activator protein | reduced virulence |
| AJCCHEED_00352 | PHI:3266 | nhaA | 98.7 | 5.2e-122 | 1 | 232 | 1.0000 | 0.9974 | rodents | infection | antiporter gene | reduced virulence |
| AJCCHEED_00353 | PHI:3266 | nhaA | 98.7 | 5e-81 | 1 | 155 | 1.0000 | 0.9974 | rodents | infection | antiporter gene | reduced virulence |
| AJCCHEED_00366 | PHI:9230 | satP | 100 | 1.6e-28 | 1 | 60 | 0.9231 | 0.8723 | birds | avian colisepticemia | succinate-acetate/proton symporter | unaffected pathogenicity |
| AJCCHEED_00367 | PHI:9230 | satP | 99 | 6e-54 | 1 | 104 | 1.0000 | 0.8723 | birds | avian colisepticemia | succinate-acetate/proton symporter | unaffected pathogenicity |
| AJCCHEED_00372 | PHI:11408 | yaaA | 82.9 | 4.9e-121 | 1 | 257 | 0.9961 | 0.8345 | rodents | pneumonia | alanine/glycine transport protein | reduced virulence |
| AJCCHEED_00378 | PHI:6532 | arcA | 100 | 9.9e-137 | 1 | 238 | 1.0000 | 1.0000 | birds | meningitis | aerobic respiration control protein | reduced virulence |
| AJCCHEED_00381 | PHI:11268 | creB | 84.6 | 1.3e-110 | 1 | 228 | 0.8803 | 0.9956 | rodents | infection | response regulator in two-component regulatory system | reduced virulence |
| AJCCHEED_00430 | PHI:6981 | tsr | 87 | 1.8e-253 | 1 | 554 | 1.0000 | 1.0000 | primates | salmonellosis | methyl-accepting chemotaxis protein | reduced virulence |
| AJCCHEED_00431 | PHI:7575 | yjiY | 96.5 | 0 | 1 | 716 | 1.0000 | 1.0000 | rodents | salmonellosis | peptide-utilizing carbon starvation protein | reduced virulence |
| AJCCHEED_00465 | PHI:2690 | FimH | 99.3 | 7.3e-169 | 1 | 300 | 1.0000 | 1.0000 | rodents | Crohn's disease | adhesion | reduced virulence |
| AJCCHEED_00466 | PHI:123639 | fimG | 98.2 | 4.7e-85 | 1 | 167 | 1.0000 | 1.0000 | rodents | neonatal meningitis | fimbrial protein | reduced virulence |
| AJCCHEED_00471 | PHI:10208 | fimI | 74.8 | 3.1e-73 | 3 | 165 | 0.9879 | 0.9157 | rodents | pneumonia | pilin (type 1 fimbria component protein) | unaffected pathogenicity |
| AJCCHEED_00472 | PHI:9888 | fimA | 95.1 | 2.1e-86 | 1 | 182 | 1.0000 | 1.0000 | primates | infection | major type 1 subunit fimbrin (pilin) | unaffected pathogenicity |
| AJCCHEED_00553 | PHI:8004 | fecI | 100 | 1e-49 | 1 | 96 | 0.8000 | 0.8844 | even-toed ungulates | bovine mastitis | RNA polymerase sigma factor | reduced virulence |
| AJCCHEED_00554 | PHI:8004 | fecI | 100 | 1e-26 | 1 | 57 | 1.0000 | 0.8844 | even-toed ungulates | bovine mastitis | RNA polymerase sigma factor | reduced virulence |
| AJCCHEED_00555 | PHI:8005 | fecR | 99.7 | 5.1e-181 | 1 | 317 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fec operon regulator | reduced virulence |
| AJCCHEED_00556 | PHI:8006 | fecA | 99.6 | 0 | 1 | 774 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | ferric citrate outer membrane transporter | reduced virulence |
| AJCCHEED_00557 | PHI:8007 | fecB | 99.3 | 2.4e-164 | 1 | 300 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate-binding periplasmic protein | reduced virulence |
| AJCCHEED_00558 | PHI:8008 | fecC | 100 | 1.8e-181 | 1 | 332 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport system permease protein | reduced virulence |
| AJCCHEED_00559 | PHI:8009 | fecD | 92.5 | 2.3e-48 | 1 | 107 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport system permease protein | reduced virulence |
| AJCCHEED_00560 | PHI:8009 | fecD | 100 | 3.6e-114 | 1 | 210 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport system permease protein | reduced virulence |
| AJCCHEED_00561 | PHI:8010 | fecE | 100 | 6.2e-145 | 1 | 255 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport ATP-binding protein | reduced virulence |
| AJCCHEED_00654 | PHI:7020 | cpdB | 99.5 | 0 | 1 | 647 | 1.0000 | 1.0000 | birds | colibacillosis | 2′,3′-cyclic phosphodiesterase | reduced virulence |
| AJCCHEED_00705 | PHI:12252 | nsrR | 77.3 | 5.1e-56 | 1 | 141 | 1.0000 | 0.9456 | monocots | Stewart's wilt; leaf blight (maize) | DNA-binding transcriptional regulator | unaffected pathogenicity |
| AJCCHEED_00706 | PHI:2625 | purA | 99.3 | 5.8e-252 | 1 | 432 | 1.0000 | 1.0000 | rodents | food poisoning | pathogenicity island | reduced virulence |
| AJCCHEED_00711 | PHI:2687 | hfq | 94.1 | 1.4e-47 | 1 | 102 | 1.0000 | 1.0000 | rodents | food poisoning | regulators of systemic infection | reduced virulence |
| AJCCHEED_00728 | PHI:2960 | frdA | 85 | 5.5e-309 | 1 | 602 | 1.0000 | 1.0000 | bony fishes | enteric septicemia | fumarate reductase | reduced virulence |
| AJCCHEED_00732 | PHI:6133 | blaCMY-2 | 77.8 | 2.4e-160 | 1 | 334 | 1.0000 | 0.8766 | rodents | salmonellosis | beta-lactamase | reduced virulence |
| AJCCHEED_00736 | PHI:6420 | EF-P | 98.9 | 4.2e-106 | 1 | 188 | 1.0000 | 1.0000 | rodents | salmonellosis | elongation factor | increased virulence (hypervirulence) |
| AJCCHEED_00745 | PHI:123643 | dcuA | 100 | 1.4e-229 | 1 | 433 | 1.0000 | 1.0000 | rodents | neonatal meningitis | regulatory protein | unaffected pathogenicity |
| AJCCHEED_00752 | PHI:11871 | cadB | 84.5 | 3.7e-209 | 1 | 432 | 0.9708 | 0.9752 | primates | edwardsiellosis | lysine-dependent acid resistance (LDAR) system membrane protein | reduced virulence |
| AJCCHEED_00759 | PHI:9347 | tagC | 98.9 | 1.7e-104 | 1 | 180 | 1.0000 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| AJCCHEED_00760 | PHI:9347 | tagC | 100 | 1.3e-134 | 1 | 243 | 0.9382 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| AJCCHEED_00761 | PHI:9347 | tagC | 99.3 | 2.4e-83 | 1 | 152 | 0.7451 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| AJCCHEED_00762 | PHI:9347 | tagC | 98.9 | 3.3e-48 | 1 | 91 | 0.7647 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| AJCCHEED_00763 | PHI:9347 | tagC | 96.6 | 3.1e-167 | 1 | 298 | 0.9803 | 0.7292 | primates | neonatal meningitis | serine protease tandem autotransporter | unaffected pathogenicity |
| AJCCHEED_00777 | PHI:123638 | DcuR | 88.7 | 1.7e-123 | 1 | 239 | 1.0000 | 1.0000 | birds | pullorum disease | two-component system | increased virulence (hypervirulence) |
| AJCCHEED_00779 | PHI:10047 | fumB | 93.2 | 5.5e-308 | 1 | 548 | 1.0000 | 1.0000 | rodents | salmonellosis | fumarate hydratase class I | reduced virulence |
| AJCCHEED_00789 | PHI:4497 | PmrA | 91 | 1.7e-114 | 1 | 222 | 1.0000 | 1.0000 | rodents | salmonellosis | lipopolysaccharide modification regulator | increased virulence (hypervirulence) |
| AJCCHEED_00838 | PHI:124242 | gltP | 99.5 | 1.5e-231 | 1 | 437 | 1.0000 | 1.0000 | rodents | neonatal meningitis | glutamate transporters | reduced virulence |
| AJCCHEED_00846 | PHI:10999 | nrfC | 99.1 | 1.6e-133 | 1 | 223 | 1.0000 | 1.0000 | rodents | infection | putative menaquinol-cytochrome c reductase 4Fe-4S subunit | unaffected pathogenicity |
| AJCCHEED_00849 | PHI:9227 | acs | 99.2 | 0 | 1 | 652 | 1.0000 | 1.0000 | birds | avian colisepticemia | acetyl-coenzyme A synthetase | reduced virulence |
| AJCCHEED_00850 | PHI:9228 | yjcH | 99 | 1.6e-54 | 1 | 104 | 1.0000 | 1.0000 | birds | avian colisepticemia | conserved inner membrane protein | reduced virulence |
| AJCCHEED_00851 | PHI:9229 | actP | 99.5 | 2.3e-301 | 1 | 549 | 1.0000 | 1.0000 | birds | avian colisepticemia | acetate/glycolate:cation symporter | reduced virulence |
| AJCCHEED_00893 | PHI:7661 | pspG | 80 | 9.1e-26 | 1 | 80 | 1.0000 | 1.0000 | rodents | salmonellosis | phage-shock protein | unaffected pathogenicity |
| Gene Name | cazy_id | identity | evalue | qstart | qend | query_coverage | subject_coverage |
|---|---|---|---|---|---|---|---|
| IJOJLDHM_00012 | QAS91308.1|GH24 | 99.3 | 0 | 71 | 675 | 0.8963 | 0.8473 |
| IJOJLDHM_00019 | ALY12934.1|GH24 | 100 | 1.25e-136 | 1 | 180 | 1 | 1 |
| IJOJLDHM_00088 | QBG41281.1|GT2|GT25 | 100 | 0 | 1 | 812 | 1 | 1 |
| IJOJLDHM_00123 | AWF26648.1|CBM50|GH23 | 100 | 1.39e-294 | 1 | 406 | 1 | 1 |
| IJOJLDHM_00204 | AQW10798.1|GT51 | 100 | 0 | 1 | 841 | 1 | 1 |
| IJOJLDHM_00265 | QFX37759.1|CE11 | 100 | 1.05e-222 | 1 | 305 | 1 | 1 |
| IJOJLDHM_00271 | AMX37803.1|GT28 | 100 | 1.68e-251 | 1 | 355 | 1 | 1 |
| IJOJLDHM_00349 | ANK05308.1|GH31 | 100 | 0 | 1 | 513 | 0.9923 | 0.7555 |
| IJOJLDHM_00479 | AQV74980.1|CE0 | 100 | 3.66e-254 | 1 | 326 | 1 | 1 |
| IJOJLDHM_00628 | ALX55147.1|GH13_29 | 100 | 0 | 1 | 551 | 1 | 1 |
| IJOJLDHM_00660 | AWK41767.1|GH13_3 | 75.3 | 1.3e-241 | 16 | 464 | 0.9553 | 0.9594 |
| IJOJLDHM_00781 | AGY86751.1|GH4 | 100 | 0 | 1 | 451 | 1 | 1 |
| IJOJLDHM_00918 | QAS91308.1|GH24 | 99.5 | 0 | 71 | 675 | 0.8963 | 0.8473 |
| AJCCHEED_00012 | QAS91308.1|GH24 | 99.3 | 0 | 71 | 675 | 0.8963 | 0.8473 |
| AJCCHEED_00019 | ALY12934.1|GH24 | 100 | 1.25e-136 | 1 | 180 | 1 | 1 |
| AJCCHEED_00088 | QBG41281.1|GT2|GT25 | 100 | 0 | 1 | 812 | 1 | 1 |
| AJCCHEED_00123 | AWF26648.1|CBM50|GH23 | 100 | 1.39e-294 | 1 | 406 | 1 | 1 |
| AJCCHEED_00204 | AQW10798.1|GT51 | 100 | 0 | 1 | 841 | 1 | 1 |
| AJCCHEED_00265 | QFX37759.1|CE11 | 100 | 1.05e-222 | 1 | 305 | 1 | 1 |
| AJCCHEED_00271 | AMX37803.1|GT28 | 100 | 1.68e-251 | 1 | 355 | 1 | 1 |
| AJCCHEED_00349 | ANK05308.1|GH31 | 100 | 0 | 1 | 513 | 0.9923 | 0.7555 |
| AJCCHEED_00479 | AQV74980.1|CE0 | 100 | 3.66e-254 | 1 | 326 | 1 | 1 |
| AJCCHEED_00628 | ALX55147.1|GH13_29 | 100 | 0 | 1 | 551 | 1 | 1 |
| AJCCHEED_00660 | AWK41767.1|GH13_3 | 75.3 | 1.3e-241 | 16 | 464 | 0.9553 | 0.9594 |
| AJCCHEED_00781 | AGY86751.1|GH4 | 100 | 0 | 1 | 451 | 1 | 1 |
| AJCCHEED_00918 | QAS91308.1|GH24 | 99.5 | 0 | 71 | 675 | 0.8963 | 0.8473 |
| Gene Name | tcid | identity | evalue | qstart | qend | query_coverage | subject_coverage | class_field | class_term | subclass | subclass_term | family | family_term |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IJOJLDHM_00022 | 1.E.1.1.2 | 94.4 | 1.1e-33 | 1 | 71 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.E | Holins | 1.E.1 | The P21 Holin S (P21 Holin) Family |
| IJOJLDHM_00049 | 1.B.1.1.2 | 98.9 | 4.5e-202 | 1 | 351 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.1 | The General Bacterial Porin (GBP) Family |
| IJOJLDHM_00135 | 3.A.1.24.1 | 99.7 | 2.8e-193 | 1 | 343 | 1.0000 | 1.5806 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00136 | 3.A.1.24.1 | 99.5 | 2.9e-111 | 1 | 217 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00137 | 3.A.1.24.1 | 100 | 2.1e-151 | 1 | 271 | 1.0000 | 1.2488 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00164 | 1.B.33.1.3 | 99.8 | 0 | 1 | 553 | 1.0000 | 1.4107 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.33 | The Outer Membrane Protein Insertion Porin (Bam Complex) (OmpIP) Family |
| IJOJLDHM_00167 | 9.B.149.2.3 | 99.7 | 5e-212 | 1 | 369 | 1.0000 | 0.8200 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.149 | The M50 Peptidase (M50-P) Family |
| IJOJLDHM_00189 | 1.A.62.2.2 | 86.7 | 9.7e-96 | 1 | 203 | 0.9807 | 0.9951 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.62 | The Homotrimeric Cation Channel (TRIC) Family |
| IJOJLDHM_00191 | 2.A.49.5.1 | 99.8 | 4e-262 | 1 | 473 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.49 | The Chloride Carrier/Channel (ClC) Family |
| IJOJLDHM_00193 | 3.A.1.14.3 | 98.1 | 0 | 1 | 633 | 0.9679 | 2.1385 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00194 | 3.A.1.14.3 | 99 | 1.6e-171 | 1 | 296 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00195 | 3.A.1.14.3 | 98.9 | 7.9e-151 | 1 | 265 | 1.0000 | 0.8953 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00228 | 3.A.1.105.17 | 100 | 8.5e-142 | 1 | 256 | 1.0000 | 0.8312 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00229 | 3.A.1.105.17 | 100 | 2.1e-171 | 1 | 307 | 0.9968 | 0.9968 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00232 | 9.B.306.4.2 | 98.7 | 0 | 1 | 685 | 0.9294 | 0.8606 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.306 | The Putative Calcium Binding Protein with Similarity to the C-termini of Anoctamins (1.A.17.5) (CBP) Family |
| IJOJLDHM_00234 | 1.B.76.1.8 | 99 | 1.2e-307 | 1 | 516 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.76 | The Copper Resistance Putative Porin (CopB) Family |
| IJOJLDHM_00235 | 8.A.2.1.3 | 100 | 3.5e-54 | 1 | 102 | 1.0000 | 0.8870 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.2 | The Secretin Auxiliary Lipoprotein (SAL) Family |
| IJOJLDHM_00251 | 2.A.3.1.3 | 99.6 | 1.9e-253 | 1 | 456 | 1.0000 | 0.9978 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IJOJLDHM_00252 | 9.B.125.1.1 | 98.9 | 4.2e-158 | 1 | 284 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.125 | The AmpE/CobD (AmpE/CobD) Family |
| IJOJLDHM_00263 | 3.A.5.1.1 | 99.8 | 0 | 1 | 891 | 0.9867 | 4.3252 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.5 | The General Secretory Pathway (Sec) Family |
| IJOJLDHM_00272 | 2.A.103.1.1 | 100 | 2.7e-230 | 1 | 414 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.103 | The Bacterial Murein Precursor Exporter (MPE) Family |
| IJOJLDHM_00275 | 9.B.146.1.6 | 100 | 1.2e-166 | 1 | 294 | 0.9866 | 0.8167 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.146 | The Putative Undecaprenyl-phosphate N-Acetylglucosaminyl Transferase (MurG) Family |
| IJOJLDHM_00293 | 3.A.1.19.1 | 98.2 | 4.5e-188 | 1 | 327 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00294 | 3.A.1.19.1 | 97.6 | 8.7e-298 | 1 | 536 | 1.0000 | 1.6391 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00295 | 3.A.1.19.1 | 95.7 | 6.3e-120 | 1 | 232 | 1.0000 | 0.7095 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00311 | 1.B.42.1.2 | 99.1 | 0 | 1 | 784 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.42 | The Outer Membrane Lipopolysaccharide Export Porin (LPS-EP) Family |
| IJOJLDHM_00320 | 2.A.37.1.1 | 99.4 | 0 | 1 | 620 | 1.0000 | 3.5227 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.37 | The Monovalent Cation:Proton Antiporter-2 (CPA2) Family |
| IJOJLDHM_00321 | 2.A.37.1.1 | 100 | 1.2e-107 | 1 | 176 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.37 | The Monovalent Cation:Proton Antiporter-2 (CPA2) Family |
| IJOJLDHM_00322 | 2.A.1.1.114 | 99.5 | 7e-253 | 1 | 443 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IJOJLDHM_00327 | 2.A.15.2.1 | 99.8 | 6.3e-298 | 1 | 503 | 0.9980 | 0.9980 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.15 | The Betaine/Carnitine/Choline Transporter (BCCT) Family |
| IJOJLDHM_00330 | 4.C.1.1.6 | 97.1 | 8.4e-306 | 1 | 517 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.C | Acyl CoA ligase-coupled transporters | 4.C.1 | The Fatty Acid Group Translocation (FAT) Family |
| IJOJLDHM_00360 | 1.E.53.1.1 | 100 | 3.6e-20 | 1 | 50 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.E | Holins | 1.E.53 | The Toxic Hok/Gef Protein (Hok/Gef) Family |
| IJOJLDHM_00362 | 1.A.33.1.2 | 100 | 2e-283 | 1 | 515 | 0.9866 | 0.8072 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.33 | The Cation Channel-forming Heat Shock Protein-70 (Hsp70) Family |
| IJOJLDHM_00390 | 4.B.1.1.1 | 94.9 | 1.3e-232 | 1 | 409 | 0.9976 | 1.7113 | 4 | Group Translocators | 4.B | Nicotinamide ribonucleoside uptake transporters | 4.B.1 | The Nicotinamide Ribonucleoside (NR) Uptake Permease (PnuC) Family |
| IJOJLDHM_00406 | 8.A.213.1.2 | 100 | 1.4e-99 | 1 | 201 | 1.0000 | 1.0000 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.213 | The Bon Domain-containing Protein (Bon DP) Family |
| IJOJLDHM_00419 | 2.A.79.2.1 | 99.6 | 2.9e-143 | 22 | 277 | 0.9242 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.79 | The Threonine/Serine Exporter (ThrE) Family |
| IJOJLDHM_00429 | 2.A.1.14.33 | 99.3 | 3.9e-259 | 1 | 453 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IJOJLDHM_00431 | 2.A.114.1.10 | 96.5 | 0 | 1 | 716 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.114 | The Putative Peptide Transporter Carbon Starvation CstA (CstA) Family |
| IJOJLDHM_00445 | 2.A.1.2.52 | 97.1 | 6.6e-221 | 1 | 410 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IJOJLDHM_00452 | 2.A.1.51.2 | 88.4 | 4.5e-133 | 1 | 275 | 0.9964 | 0.7015 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IJOJLDHM_00455 | 9.A.5.4.2 | 100 | 2.5e-121 | 1 | 227 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.A | Recognized transporters of unknown biochemical mechanism | 9.A.5 | The Putative Arginine Transporter (ArgW) Family |
| IJOJLDHM_00456 | 9.B.156.1.1 | 99.3 | 1e-78 | 1 | 153 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.156 | The Putative 4-10 TMS Permease (4-10P) Family |
| IJOJLDHM_00464 | 2.A.8.1.3 | 100 | 1.3e-235 | 1 | 447 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.8 | The Gluconate:H+ Symporter (GntP) Family |
| IJOJLDHM_00468 | 1.B.11.3.9 | 99.3 | 0 | 1 | 878 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.11 | The Outer Membrane Fimbrial Usher Porin (FUP) Family |
| IJOJLDHM_00477 | 1.B.35.2.1 | 100 | 1.4e-143 | 1 | 238 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.35 | The Oligogalacturonate-specific Porin (KdgM) Family |
| IJOJLDHM_00489 | 4.A.5.1.3 | 100 | 3.7e-47 | 1 | 92 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.5 | The PTS Galactitol (Gat) Family |
| IJOJLDHM_00490 | 4.A.5.1.3 | 99.7 | 5.4e-195 | 1 | 356 | 0.9944 | 3.8696 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.5 | The PTS Galactitol (Gat) Family |
| IJOJLDHM_00491 | 4.A.5.1.3 | 100 | 2.3e-34 | 1 | 78 | 1.0000 | 0.8478 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.5 | The PTS Galactitol (Gat) Family |
| IJOJLDHM_00493 | 4.A.5.1.3 | 98.6 | 3.9e-80 | 1 | 143 | 1.0000 | 1.5543 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.5 | The PTS Galactitol (Gat) Family |
| IJOJLDHM_00556 | 1.B.14.1.20 | 99.6 | 0 | 1 | 774 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.14 | The Outer Membrane Receptor (OMR) Family |
| IJOJLDHM_00557 | 3.A.1.14.1 | 99.3 | 5.4e-164 | 1 | 300 | 1.0000 | 1.1765 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00558 | 3.A.1.14.1 | 100 | 4.1e-181 | 1 | 332 | 1.0000 | 1.3020 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00560 | 3.A.1.14.1 | 100 | 8e-114 | 1 | 210 | 1.0000 | 0.8235 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00561 | 3.A.1.14.1 | 100 | 1.4e-144 | 1 | 255 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00577 | 2.A.1.7.5 | 95.9 | 3.6e-233 | 1 | 438 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IJOJLDHM_00585 | 4.A.7.1.2 | 98.6 | 8.5e-154 | 5 | 295 | 0.9864 | 3.0632 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| IJOJLDHM_00627 | 4.A.1.2.4 | 99.4 | 1.2e-266 | 1 | 473 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.1 | The PTS Glucose-Glucoside (Glc) Family |
| IJOJLDHM_00646 | 9.B.121.6.2 | 99.4 | 0 | 2 | 1256 | 0.9992 | 0.9968 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.121 | The AsmA (AsmA) Family |
| IJOJLDHM_00647 | 1.B.33.2.4 | 100 | 0 | 1 | 577 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.33 | The Outer Membrane Protein Insertion Porin (Bam Complex) (OmpIP) Family |
| IJOJLDHM_00649 | 1.A.112.2.11 | 99.8 | 3.7e-249 | 1 | 447 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.112 | The Cyclin M Mg2+ Exporter (CNNM) Family |
| IJOJLDHM_00658 | 2.A.7.3.19 | 99.1 | 2e-180 | 1 | 321 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.7 | The Drug/Metabolite Transporter (DMT) Superfamily |
| IJOJLDHM_00660 | 2.A.3.1.7 | 100 | 3e-262 | 1 | 470 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IJOJLDHM_00684 | 4.A.7.1.1 | 96.1 | 8.6e-81 | 1 | 154 | 1.0000 | 1.5248 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| IJOJLDHM_00685 | 4.A.7.1.1 | 100 | 1.1e-52 | 1 | 101 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| IJOJLDHM_00686 | 4.A.7.1.1 | 99.3 | 3e-69 | 1 | 135 | 1.0000 | 1.3366 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| IJOJLDHM_00687 | 4.A.7.1.1 | 99.4 | 2.2e-171 | 1 | 313 | 0.9720 | 3.0990 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| IJOJLDHM_00698 | 9.B.358.1.4 | 98.5 | 4.6e-67 | 1 | 132 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.358 | The DUF350 domain-containing (DUF350) Family |
| IJOJLDHM_00711 | 9.B.468.1.1 | 100 | 5.2e-50 | 1 | 102 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.468 | The Hfq RNA Chaparone Protein (Hfq) Family |
| IJOJLDHM_00724 | 1.A.23.1.3 | 99.5 | 0 | 1 | 1107 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.23 | The Small Conductance Mechanosensitive Ion Channel (MscS) Family |
| IJOJLDHM_00725 | 9.B.444.1.2 | 98 | 5.2e-55 | 1 | 100 | 1.0000 | 0.9615 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.444 | The Uncharacterized YjeO/YgiZ (YjeO/YgiZ) Family |
| IJOJLDHM_00726 | 2.A.3.7.5 | 98.2 | 7.1e-278 | 1 | 500 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IJOJLDHM_00732 | 8.A.212.1.4 | 74.2 | 8.2e-153 | 1 | 333 | 0.9970 | 0.8763 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.212 | The d-Amino Acid Peptidase (dAAP) Family |
| IJOJLDHM_00734 | 2.A.7.1.4 | 100 | 9.1e-50 | 1 | 105 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.7 | The Drug/Metabolite Transporter (DMT) Superfamily |
| IJOJLDHM_00735 | 9.B.13.1.1 | 100 | 1.9e-18 | 1 | 48 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.13 | The Putative Pore-forming Entericidin (ECN) Family |
| IJOJLDHM_00742 | 2.A.3.13.1 | 99.5 | 3.7e-235 | 1 | 418 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IJOJLDHM_00745 | 2.A.13.1.1 | 100 | 3.1e-229 | 1 | 433 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.13 | The C<sub>4</sub>-Dicarboxylate Uptake (Dcu) Family |
| IJOJLDHM_00747 | 5.A.1.1.1 | 98.9 | 7.5e-303 | 1 | 534 | 0.9082 | 0.9451 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.1 | The Disulfide Bond Oxidoreductase D (DsbD) Family |
| IJOJLDHM_00752 | 2.A.3.2.2 | 100 | 2.4e-237 | 1 | 426 | 0.9573 | 0.9595 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IJOJLDHM_00754 | 2.A.17.1.5 | 99.6 | 7.4e-272 | 1 | 485 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.17 | The Proton-dependent Oligopeptide Transporter (POT/PTR) Family |
| IJOJLDHM_00778 | 2.A.13.1.2 | 100 | 2.4e-245 | 1 | 446 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.13 | The C<sub>4</sub>-Dicarboxylate Uptake (Dcu) Family |
| IJOJLDHM_00786 | 2.A.3.2.5 | 100 | 5.7e-172 | 1 | 313 | 0.9905 | 0.7034 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IJOJLDHM_00792 | 2.A.1.6.4 | 99.5 | 1.1e-242 | 1 | 436 | 1.0000 | 0.8720 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IJOJLDHM_00799 | 3.A.1.9.1 | 98.5 | 1e-142 | 1 | 262 | 1.0000 | 1.0116 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00800 | 3.A.1.9.1 | 98.5 | 2.1e-188 | 1 | 338 | 1.0000 | 1.3050 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00801 | 3.A.1.9.1 | 99.6 | 4.5e-143 | 1 | 259 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00820 | 3.A.1.2.6 | 99.2 | 6.8e-292 | 1 | 510 | 1.0000 | 1.6399 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00821 | 3.A.1.2.6 | 99.1 | 1e-171 | 1 | 326 | 1.0000 | 1.0482 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IJOJLDHM_00826 | 8.A.1.1.3 | 98.5 | 6.6e-182 | 1 | 343 | 1.0000 | 1.0000 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.1 | The Membrane Fusion Protein (MFP) Family |
| IJOJLDHM_00827 | 2.A.85.6.1 | 98.4 | 0 | 1 | 683 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.85 | The Aromatic Acid Exporter (ArAE) Family |
| IJOJLDHM_00828 | 1.B.17.3.9 | 98.2 | 3e-265 | 1 | 488 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.17 | The Outer Membrane Factor (OMF) Family |
| IJOJLDHM_00830 | 3.D.1.9.2 | 99.6 | 0 | 1 | 559 | 1.0000 | 2.1922 | 3 | Primary Active Transporters | 3.D | Oxidoreduction-driven transporters | 3.D.1 | The H+ or Na+-translocating NADH Dehydrogenase (NDH) Family |
| IJOJLDHM_00838 | 2.A.23.1.1 | 99.5 | 3.4e-231 | 1 | 437 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.23 | The Dicarboxylate/Amino Acid:Cation (Na+ or H+) Symporter (DAACS) Family |
| IJOJLDHM_00846 | 5.A.3.5.3 | 99.1 | 3.7e-133 | 1 | 223 | 1.0000 | 0.7013 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.3 | The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family |
| IJOJLDHM_00848 | 5.A.3.5.3 | 99.1 | 3.2e-281 | 53 | 517 | 0.8994 | 1.4623 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.3 | The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family |
| IJOJLDHM_00850 | 9.B.136.1.1 | 99 | 3.5e-54 | 1 | 104 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.136 | The 2 TMS Membrane Protein, YjcH (YjcH) Family |
| IJOJLDHM_00851 | 2.A.21.7.2 | 99.5 | 5e-301 | 1 | 549 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.21 | The Solute:Sodium Symporter (SSS) Family |
| IJOJLDHM_00852 | 2.A.122.1.8 | 80.7 | 2e-94 | 1 | 223 | 0.9738 | 0.9781 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.122 | The LrgB/CidB Holin-like Glycolate/Glycerate Transporter (LrgB/CidB/GGT) Family |
| IJOJLDHM_00853 | 1.E.14.1.9 | 100 | 1.3e-67 | 1 | 136 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.E | Holins | 1.E.14 | The CidA/LrgA Holin (CidA/LrgA Holin) Family |
| IJOJLDHM_00855 | 2.A.36.3.1 | 99.5 | 1.1e-295 | 1 | 549 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.36 | The Monovalent Cation:Proton Antiporter-1 (CPA1) Family |
| IJOJLDHM_00857 | 2.A.40.7.5 | 99 | 3.9e-202 | 1 | 386 | 0.9674 | 0.8597 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.40 | The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family |
| IJOJLDHM_00901 | 1.B.6.2.20 | 88.4 | 2.4e-99 | 1 | 199 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.6 | The OmpA-OmpF Porin (OOP) Family |
| AJCCHEED_00022 | 1.E.1.1.2 | 94.4 | 1.1e-33 | 1 | 71 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.E | Holins | 1.E.1 | The P21 Holin S (P21 Holin) Family |
| AJCCHEED_00049 | 1.B.1.1.2 | 98.9 | 4.5e-202 | 1 | 351 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.1 | The General Bacterial Porin (GBP) Family |
| AJCCHEED_00135 | 3.A.1.24.1 | 99.7 | 2.8e-193 | 1 | 343 | 1.0000 | 1.5806 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00136 | 3.A.1.24.1 | 99.5 | 2.9e-111 | 1 | 217 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00137 | 3.A.1.24.1 | 100 | 2.1e-151 | 1 | 271 | 1.0000 | 1.2488 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00164 | 1.B.33.1.3 | 99.8 | 0 | 1 | 553 | 1.0000 | 1.4107 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.33 | The Outer Membrane Protein Insertion Porin (Bam Complex) (OmpIP) Family |
| AJCCHEED_00167 | 9.B.149.2.3 | 99.7 | 5e-212 | 1 | 369 | 1.0000 | 0.8200 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.149 | The M50 Peptidase (M50-P) Family |
| AJCCHEED_00189 | 1.A.62.2.2 | 86.7 | 9.7e-96 | 1 | 203 | 0.9807 | 0.9951 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.62 | The Homotrimeric Cation Channel (TRIC) Family |
| AJCCHEED_00191 | 2.A.49.5.1 | 99.8 | 4e-262 | 1 | 473 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.49 | The Chloride Carrier/Channel (ClC) Family |
| AJCCHEED_00193 | 3.A.1.14.3 | 98.1 | 0 | 1 | 633 | 0.9679 | 2.1385 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00194 | 3.A.1.14.3 | 99 | 1.6e-171 | 1 | 296 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00195 | 3.A.1.14.3 | 98.9 | 7.9e-151 | 1 | 265 | 1.0000 | 0.8953 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00228 | 3.A.1.105.17 | 100 | 8.5e-142 | 1 | 256 | 1.0000 | 0.8312 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00229 | 3.A.1.105.17 | 100 | 2.1e-171 | 1 | 307 | 0.9968 | 0.9968 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00232 | 9.B.306.4.2 | 98.7 | 0 | 1 | 685 | 0.9294 | 0.8606 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.306 | The Putative Calcium Binding Protein with Similarity to the C-termini of Anoctamins (1.A.17.5) (CBP) Family |
| AJCCHEED_00234 | 1.B.76.1.8 | 99 | 1.2e-307 | 1 | 516 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.76 | The Copper Resistance Putative Porin (CopB) Family |
| AJCCHEED_00235 | 8.A.2.1.3 | 100 | 3.5e-54 | 1 | 102 | 1.0000 | 0.8870 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.2 | The Secretin Auxiliary Lipoprotein (SAL) Family |
| AJCCHEED_00251 | 2.A.3.1.3 | 99.6 | 1.9e-253 | 1 | 456 | 1.0000 | 0.9978 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| AJCCHEED_00252 | 9.B.125.1.1 | 98.9 | 4.2e-158 | 1 | 284 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.125 | The AmpE/CobD (AmpE/CobD) Family |
| AJCCHEED_00263 | 3.A.5.1.1 | 99.8 | 0 | 1 | 891 | 0.9867 | 4.3252 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.5 | The General Secretory Pathway (Sec) Family |
| AJCCHEED_00272 | 2.A.103.1.1 | 100 | 2.7e-230 | 1 | 414 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.103 | The Bacterial Murein Precursor Exporter (MPE) Family |
| AJCCHEED_00275 | 9.B.146.1.6 | 100 | 1.2e-166 | 1 | 294 | 0.9866 | 0.8167 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.146 | The Putative Undecaprenyl-phosphate N-Acetylglucosaminyl Transferase (MurG) Family |
| AJCCHEED_00293 | 3.A.1.19.1 | 98.2 | 4.5e-188 | 1 | 327 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00294 | 3.A.1.19.1 | 97.6 | 8.7e-298 | 1 | 536 | 1.0000 | 1.6391 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00295 | 3.A.1.19.1 | 95.7 | 6.3e-120 | 1 | 232 | 1.0000 | 0.7095 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00311 | 1.B.42.1.2 | 99.1 | 0 | 1 | 784 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.42 | The Outer Membrane Lipopolysaccharide Export Porin (LPS-EP) Family |
| AJCCHEED_00320 | 2.A.37.1.1 | 99.4 | 0 | 1 | 620 | 1.0000 | 3.5227 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.37 | The Monovalent Cation:Proton Antiporter-2 (CPA2) Family |
| AJCCHEED_00321 | 2.A.37.1.1 | 100 | 1.2e-107 | 1 | 176 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.37 | The Monovalent Cation:Proton Antiporter-2 (CPA2) Family |
| AJCCHEED_00322 | 2.A.1.1.114 | 99.5 | 7e-253 | 1 | 443 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| AJCCHEED_00327 | 2.A.15.2.1 | 99.8 | 6.3e-298 | 1 | 503 | 0.9980 | 0.9980 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.15 | The Betaine/Carnitine/Choline Transporter (BCCT) Family |
| AJCCHEED_00330 | 4.C.1.1.6 | 97.1 | 8.4e-306 | 1 | 517 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.C | Acyl CoA ligase-coupled transporters | 4.C.1 | The Fatty Acid Group Translocation (FAT) Family |
| AJCCHEED_00360 | 1.E.53.1.1 | 100 | 3.6e-20 | 1 | 50 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.E | Holins | 1.E.53 | The Toxic Hok/Gef Protein (Hok/Gef) Family |
| AJCCHEED_00362 | 1.A.33.1.2 | 100 | 2e-283 | 1 | 515 | 0.9866 | 0.8072 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.33 | The Cation Channel-forming Heat Shock Protein-70 (Hsp70) Family |
| AJCCHEED_00390 | 4.B.1.1.1 | 94.9 | 1.3e-232 | 1 | 409 | 0.9976 | 1.7113 | 4 | Group Translocators | 4.B | Nicotinamide ribonucleoside uptake transporters | 4.B.1 | The Nicotinamide Ribonucleoside (NR) Uptake Permease (PnuC) Family |
| AJCCHEED_00406 | 8.A.213.1.2 | 100 | 1.4e-99 | 1 | 201 | 1.0000 | 1.0000 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.213 | The Bon Domain-containing Protein (Bon DP) Family |
| AJCCHEED_00419 | 2.A.79.2.1 | 99.6 | 2.9e-143 | 22 | 277 | 0.9242 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.79 | The Threonine/Serine Exporter (ThrE) Family |
| AJCCHEED_00429 | 2.A.1.14.33 | 99.3 | 3.9e-259 | 1 | 453 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| AJCCHEED_00431 | 2.A.114.1.10 | 96.5 | 0 | 1 | 716 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.114 | The Putative Peptide Transporter Carbon Starvation CstA (CstA) Family |
| AJCCHEED_00445 | 2.A.1.2.52 | 97.1 | 6.6e-221 | 1 | 410 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| AJCCHEED_00452 | 2.A.1.51.2 | 88.4 | 4.5e-133 | 1 | 275 | 0.9964 | 0.7015 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| AJCCHEED_00455 | 9.A.5.4.2 | 100 | 2.5e-121 | 1 | 227 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.A | Recognized transporters of unknown biochemical mechanism | 9.A.5 | The Putative Arginine Transporter (ArgW) Family |
| AJCCHEED_00456 | 9.B.156.1.1 | 99.3 | 1e-78 | 1 | 153 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.156 | The Putative 4-10 TMS Permease (4-10P) Family |
| AJCCHEED_00464 | 2.A.8.1.3 | 100 | 1.3e-235 | 1 | 447 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.8 | The Gluconate:H+ Symporter (GntP) Family |
| AJCCHEED_00468 | 1.B.11.3.9 | 99.3 | 0 | 1 | 878 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.11 | The Outer Membrane Fimbrial Usher Porin (FUP) Family |
| AJCCHEED_00477 | 1.B.35.2.1 | 100 | 1.4e-143 | 1 | 238 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.35 | The Oligogalacturonate-specific Porin (KdgM) Family |
| AJCCHEED_00489 | 4.A.5.1.3 | 100 | 3.7e-47 | 1 | 92 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.5 | The PTS Galactitol (Gat) Family |
| AJCCHEED_00490 | 4.A.5.1.3 | 99.7 | 5.4e-195 | 1 | 356 | 0.9944 | 3.8696 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.5 | The PTS Galactitol (Gat) Family |
| AJCCHEED_00491 | 4.A.5.1.3 | 100 | 2.3e-34 | 1 | 78 | 1.0000 | 0.8478 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.5 | The PTS Galactitol (Gat) Family |
| AJCCHEED_00493 | 4.A.5.1.3 | 98.6 | 3.9e-80 | 1 | 143 | 1.0000 | 1.5543 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.5 | The PTS Galactitol (Gat) Family |
| AJCCHEED_00556 | 1.B.14.1.20 | 99.6 | 0 | 1 | 774 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.14 | The Outer Membrane Receptor (OMR) Family |
| AJCCHEED_00557 | 3.A.1.14.1 | 99.3 | 5.4e-164 | 1 | 300 | 1.0000 | 1.1765 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00558 | 3.A.1.14.1 | 100 | 4.1e-181 | 1 | 332 | 1.0000 | 1.3020 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00560 | 3.A.1.14.1 | 100 | 8e-114 | 1 | 210 | 1.0000 | 0.8235 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00561 | 3.A.1.14.1 | 100 | 1.4e-144 | 1 | 255 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00577 | 2.A.1.7.5 | 95.9 | 3.6e-233 | 1 | 438 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| AJCCHEED_00585 | 4.A.7.1.2 | 98.6 | 8.5e-154 | 5 | 295 | 0.9864 | 3.0632 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| AJCCHEED_00627 | 4.A.1.2.4 | 99.4 | 1.2e-266 | 1 | 473 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.1 | The PTS Glucose-Glucoside (Glc) Family |
| AJCCHEED_00646 | 9.B.121.6.2 | 99.4 | 0 | 2 | 1256 | 0.9992 | 0.9968 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.121 | The AsmA (AsmA) Family |
| AJCCHEED_00647 | 1.B.33.2.4 | 100 | 0 | 1 | 577 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.33 | The Outer Membrane Protein Insertion Porin (Bam Complex) (OmpIP) Family |
| AJCCHEED_00649 | 1.A.112.2.11 | 99.8 | 3.7e-249 | 1 | 447 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.112 | The Cyclin M Mg2+ Exporter (CNNM) Family |
| AJCCHEED_00658 | 2.A.7.3.19 | 99.1 | 2e-180 | 1 | 321 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.7 | The Drug/Metabolite Transporter (DMT) Superfamily |
| AJCCHEED_00660 | 2.A.3.1.7 | 100 | 3e-262 | 1 | 470 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| AJCCHEED_00684 | 4.A.7.1.1 | 96.1 | 8.6e-81 | 1 | 154 | 1.0000 | 1.5248 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| AJCCHEED_00685 | 4.A.7.1.1 | 100 | 1.1e-52 | 1 | 101 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| AJCCHEED_00686 | 4.A.7.1.1 | 99.3 | 3e-69 | 1 | 135 | 1.0000 | 1.3366 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| AJCCHEED_00687 | 4.A.7.1.1 | 99.4 | 2.2e-171 | 1 | 313 | 0.9720 | 3.0990 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| AJCCHEED_00698 | 9.B.358.1.4 | 98.5 | 4.6e-67 | 1 | 132 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.358 | The DUF350 domain-containing (DUF350) Family |
| AJCCHEED_00711 | 9.B.468.1.1 | 100 | 5.2e-50 | 1 | 102 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.468 | The Hfq RNA Chaparone Protein (Hfq) Family |
| AJCCHEED_00724 | 1.A.23.1.3 | 99.5 | 0 | 1 | 1107 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.23 | The Small Conductance Mechanosensitive Ion Channel (MscS) Family |
| AJCCHEED_00725 | 9.B.444.1.2 | 98 | 5.2e-55 | 1 | 100 | 1.0000 | 0.9615 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.444 | The Uncharacterized YjeO/YgiZ (YjeO/YgiZ) Family |
| AJCCHEED_00726 | 2.A.3.7.5 | 98.2 | 7.1e-278 | 1 | 500 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| AJCCHEED_00732 | 8.A.212.1.4 | 74.2 | 8.2e-153 | 1 | 333 | 0.9970 | 0.8763 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.212 | The d-Amino Acid Peptidase (dAAP) Family |
| AJCCHEED_00734 | 2.A.7.1.4 | 100 | 9.1e-50 | 1 | 105 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.7 | The Drug/Metabolite Transporter (DMT) Superfamily |
| AJCCHEED_00735 | 9.B.13.1.1 | 100 | 1.9e-18 | 1 | 48 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.13 | The Putative Pore-forming Entericidin (ECN) Family |
| AJCCHEED_00742 | 2.A.3.13.1 | 99.5 | 3.7e-235 | 1 | 418 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| AJCCHEED_00745 | 2.A.13.1.1 | 100 | 3.1e-229 | 1 | 433 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.13 | The C<sub>4</sub>-Dicarboxylate Uptake (Dcu) Family |
| AJCCHEED_00747 | 5.A.1.1.1 | 98.9 | 7.5e-303 | 1 | 534 | 0.9082 | 0.9451 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.1 | The Disulfide Bond Oxidoreductase D (DsbD) Family |
| AJCCHEED_00752 | 2.A.3.2.2 | 100 | 2.4e-237 | 1 | 426 | 0.9573 | 0.9595 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| AJCCHEED_00754 | 2.A.17.1.5 | 99.6 | 7.4e-272 | 1 | 485 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.17 | The Proton-dependent Oligopeptide Transporter (POT/PTR) Family |
| AJCCHEED_00778 | 2.A.13.1.2 | 100 | 2.4e-245 | 1 | 446 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.13 | The C<sub>4</sub>-Dicarboxylate Uptake (Dcu) Family |
| AJCCHEED_00786 | 2.A.3.2.5 | 100 | 5.7e-172 | 1 | 313 | 0.9905 | 0.7034 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| AJCCHEED_00792 | 2.A.1.6.4 | 99.5 | 1.1e-242 | 1 | 436 | 1.0000 | 0.8720 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| AJCCHEED_00799 | 3.A.1.9.1 | 98.5 | 1e-142 | 1 | 262 | 1.0000 | 1.0116 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00800 | 3.A.1.9.1 | 98.5 | 2.1e-188 | 1 | 338 | 1.0000 | 1.3050 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00801 | 3.A.1.9.1 | 99.6 | 4.5e-143 | 1 | 259 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00820 | 3.A.1.2.6 | 99.2 | 6.8e-292 | 1 | 510 | 1.0000 | 1.6399 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00821 | 3.A.1.2.6 | 99.1 | 1e-171 | 1 | 326 | 1.0000 | 1.0482 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| AJCCHEED_00826 | 8.A.1.1.3 | 98.5 | 6.6e-182 | 1 | 343 | 1.0000 | 1.0000 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.1 | The Membrane Fusion Protein (MFP) Family |
| AJCCHEED_00827 | 2.A.85.6.1 | 98.4 | 0 | 1 | 683 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.85 | The Aromatic Acid Exporter (ArAE) Family |
| AJCCHEED_00828 | 1.B.17.3.9 | 98.2 | 3e-265 | 1 | 488 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.17 | The Outer Membrane Factor (OMF) Family |
| AJCCHEED_00830 | 3.D.1.9.2 | 99.6 | 0 | 1 | 559 | 1.0000 | 2.1922 | 3 | Primary Active Transporters | 3.D | Oxidoreduction-driven transporters | 3.D.1 | The H+ or Na+-translocating NADH Dehydrogenase (NDH) Family |
| AJCCHEED_00838 | 2.A.23.1.1 | 99.5 | 3.4e-231 | 1 | 437 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.23 | The Dicarboxylate/Amino Acid:Cation (Na+ or H+) Symporter (DAACS) Family |
| AJCCHEED_00846 | 5.A.3.5.3 | 99.1 | 3.7e-133 | 1 | 223 | 1.0000 | 0.7013 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.3 | The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family |
| AJCCHEED_00848 | 5.A.3.5.3 | 99.1 | 3.2e-281 | 53 | 517 | 0.8994 | 1.4623 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.3 | The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family |
| AJCCHEED_00850 | 9.B.136.1.1 | 99 | 3.5e-54 | 1 | 104 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.136 | The 2 TMS Membrane Protein, YjcH (YjcH) Family |
| AJCCHEED_00851 | 2.A.21.7.2 | 99.5 | 5e-301 | 1 | 549 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.21 | The Solute:Sodium Symporter (SSS) Family |
| AJCCHEED_00852 | 2.A.122.1.8 | 80.7 | 2e-94 | 1 | 223 | 0.9738 | 0.9781 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.122 | The LrgB/CidB Holin-like Glycolate/Glycerate Transporter (LrgB/CidB/GGT) Family |
| AJCCHEED_00853 | 1.E.14.1.9 | 100 | 1.3e-67 | 1 | 136 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.E | Holins | 1.E.14 | The CidA/LrgA Holin (CidA/LrgA Holin) Family |
| AJCCHEED_00855 | 2.A.36.3.1 | 99.5 | 1.1e-295 | 1 | 549 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.36 | The Monovalent Cation:Proton Antiporter-1 (CPA1) Family |
| AJCCHEED_00857 | 2.A.40.7.5 | 99 | 3.9e-202 | 1 | 386 | 0.9674 | 0.8597 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.40 | The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family |
| AJCCHEED_00901 | 1.B.6.2.20 | 88.4 | 2.4e-99 | 1 | 199 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.6 | The OmpA-OmpF Porin (OOP) Family |