Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C118
  Reference Plasmid   CP061233.1
  Reference Plasmid Size   1005770
  Reference Plasmid GC Content   0.51
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0144666 LOHMMKBF_00831 750582 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4530T>C None
M0144667 LOHMMKBF_00831 750583 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4531A>C None
M0144668 LOHMMKBF_00831 750589 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4537G>C None
M0144669 LOHMMKBF_00831 750600 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4548G>A None
M0144670 LOHMMKBF_00831 750609 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4557G>T None
M0144671 LOHMMKBF_00833 751085 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4364G>A None
M0144672 LOHMMKBF_00833 751155 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4434A>T None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition
JKPJIPME_00164 VFG000332 LOS 79.3 1.8e-110 1 237 0.9713 0.7695 Immune modulation ADP-L-glycero-D-mannoheptose-6-epimerase experiment
JKPJIPME_00596 VFG034721 Ibes 98.3 2.9e-249 1 415 1.0 0.7192 Invasion phosphoethanolamine transferase CptA experiment
JKPJIPME_00629 VFG046465 EF-Tu 80.2 1.6e-193 1 393 0.9975 0.9975 Adherence elongation factor Tu experiment
JKPJIPME_00787 VFG052339 PmrAB 85.9 2e-169 4 358 0.9699 0.9972 Regulation sensory kinase PmrB experiment
JKPJIPME_00788 VFG052340 PmrAB 91 3.8e-115 1 222 1.0 1 Regulation response regulator PmrA experiment
JKPJIPME_01008 VFG001855 Hsp60 75.7 6.8e-205 3 504 0.996 0.9144 Adherence Hsp60, 60K heat shock protein HtpB experiment
LOHMMKBF_00164 VFG000332 LOS 79.3 1.8e-110 1 237 0.9713 0.7695 Immune modulation ADP-L-glycero-D-mannoheptose-6-epimerase experiment
LOHMMKBF_00596 VFG034721 Ibes 98.3 2.9e-249 1 415 1.0 0.7192 Invasion phosphoethanolamine transferase CptA experiment
LOHMMKBF_00629 VFG046465 EF-Tu 80.2 1.6e-193 1 393 0.9975 0.9975 Adherence elongation factor Tu experiment
LOHMMKBF_00787 VFG052339 PmrAB 85.9 2e-169 4 358 0.9699 0.9972 Regulation sensory kinase PmrB experiment
LOHMMKBF_00788 VFG052340 PmrAB 91 3.8e-115 1 222 1.0 1 Regulation response regulator PmrA experiment
LOHMMKBF_01008 VFG001855 Hsp60 75.7 6.8e-205 3 504 0.996 0.9144 Adherence Hsp60, 60K heat shock protein HtpB experiment
JKPJIPME_00143 VFG035950 UpaG adhesin, trimeric AT 99.8 0 1 1616 1.0 1 Adherence trimeric autotransporter adhesin EhaG prediction
JKPJIPME_00164 VFG000332 LOS 79.3 1.4e-109 1 237 0.9713 0.7695 Immune modulation ADP-L-glycero-D-mannoheptose-6-epimerase prediction
JKPJIPME_00311 VFG042593 Stg fimbriae 98.6 8.1e-204 1 357 1.0 1 Adherence StgD prediction
JKPJIPME_00312 VFG042592 Stg fimbriae 100 0 1 840 1.0 1 Adherence StgC prediction
JKPJIPME_00314 VFG042591 Stg fimbriae 99.5 2.3e-110 3 201 0.9851 0.8189 Adherence StgB prediction
JKPJIPME_00315 VFG042590 Stg fimbriae 99.5 3.6e-102 1 190 1.0 1 Adherence StgA prediction
JKPJIPME_00384 VFG007659 Capsular polysaccharide 80.3 9.6e-173 3 353 0.9887 0.9643 Immune modulation dTDP-glucose 4,6-dehydratase prediction
JKPJIPME_00386 VFG048826 Capsule 73.2 1.6e-108 1 254 0.9732 0.8789 Immune modulation glucose-1-phosphate thymidylyltransferase prediction
JKPJIPME_00596 VFG034718 Ibes 99.8 2.1e-251 1 415 1.0 0.7192 Invasion phosphoethanolamine transferase CptA prediction
JKPJIPME_00629 VFG046459 EF-Tu 81.7 2e-195 1 393 0.9975 0.9975 Adherence elongation factor Tu prediction
JKPJIPME_00649 VFG013612 Heme biosynthesis 79.4 3.9e-166 1 354 1.0 1 Nutritional/Metabolic factor uroporphyrinogen decarboxylase prediction
JKPJIPME_00670 VFG034777 TTSS secreted effectors 99.2 3.5e-304 1 524 1.0 1 Effector delivery system Type III secretion system effector EspL4 prediction
JKPJIPME_00685 VFG013531 Exopolysaccharide 77.6 7.9e-259 1 548 0.9982 0.9982 Immune modulation glucose-6-phosphate isomerase prediction
JKPJIPME_00787 VFG052339 PmrAB 85.9 1.5e-168 4 358 0.9699 0.9972 Regulation sensory kinase PmrB prediction
JKPJIPME_00788 VFG052340 PmrAB 91 2.8e-114 1 222 1.0 1 Regulation response regulator PmrA prediction
JKPJIPME_00988 VFG042529 Adhesive factor/rabbit 1 (AF/R1) pili 81.7 2.7e-107 1 229 0.9957 0.9957 Adherence chaperonin precursor prediction
JKPJIPME_00991 VFG012353 Tia/Hek 96.2 8.8e-118 1 208 1.0 0.8455 Invasion outer membrane beta-barrel protein prediction
JKPJIPME_01008 VFG045692 Hsp60 75.2 3.5e-205 3 504 0.996 0.9111 Adherence Hsp60, 60K heat shock protein HtpB prediction
LOHMMKBF_00143 VFG035950 UpaG adhesin, trimeric AT 99.8 0 1 1616 1.0 1 Adherence trimeric autotransporter adhesin EhaG prediction
LOHMMKBF_00164 VFG000332 LOS 79.3 1.4e-109 1 237 0.9713 0.7695 Immune modulation ADP-L-glycero-D-mannoheptose-6-epimerase prediction
LOHMMKBF_00311 VFG042593 Stg fimbriae 98.6 8.1e-204 1 357 1.0 1 Adherence StgD prediction
LOHMMKBF_00312 VFG042592 Stg fimbriae 100 0 1 840 1.0 1 Adherence StgC prediction
LOHMMKBF_00314 VFG042591 Stg fimbriae 99.5 2.3e-110 3 201 0.9851 0.8189 Adherence StgB prediction
LOHMMKBF_00315 VFG042590 Stg fimbriae 99.5 3.6e-102 1 190 1.0 1 Adherence StgA prediction
LOHMMKBF_00384 VFG007659 Capsular polysaccharide 80.3 9.6e-173 3 353 0.9887 0.9643 Immune modulation dTDP-glucose 4,6-dehydratase prediction
LOHMMKBF_00386 VFG048826 Capsule 73.2 1.6e-108 1 254 0.9732 0.8789 Immune modulation glucose-1-phosphate thymidylyltransferase prediction
LOHMMKBF_00596 VFG034718 Ibes 99.8 2.1e-251 1 415 1.0 0.7192 Invasion phosphoethanolamine transferase CptA prediction
LOHMMKBF_00629 VFG046459 EF-Tu 81.7 2e-195 1 393 0.9975 0.9975 Adherence elongation factor Tu prediction
LOHMMKBF_00649 VFG013612 Heme biosynthesis 79.4 3.9e-166 1 354 1.0 1 Nutritional/Metabolic factor uroporphyrinogen decarboxylase prediction
LOHMMKBF_00670 VFG034777 TTSS secreted effectors 99.2 3.5e-304 1 524 1.0 1 Effector delivery system Type III secretion system effector EspL4 prediction
LOHMMKBF_00685 VFG013531 Exopolysaccharide 77.6 7.9e-259 1 548 0.9982 0.9982 Immune modulation glucose-6-phosphate isomerase prediction
LOHMMKBF_00787 VFG052339 PmrAB 85.9 1.5e-168 4 358 0.9699 0.9972 Regulation sensory kinase PmrB prediction
LOHMMKBF_00788 VFG052340 PmrAB 91 2.8e-114 1 222 1.0 1 Regulation response regulator PmrA prediction
LOHMMKBF_00988 VFG042529 Adhesive factor/rabbit 1 (AF/R1) pili 81.7 2.7e-107 1 229 0.9957 0.9957 Adherence chaperonin precursor prediction
LOHMMKBF_00991 VFG012353 Tia/Hek 96.2 8.8e-118 1 208 1.0 0.8455 Invasion outer membrane beta-barrel protein prediction
LOHMMKBF_01008 VFG045692 Hsp60 75.2 3.5e-205 3 504 0.996 0.9111 Adherence Hsp60, 60K heat shock protein HtpB prediction







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group
JKPJIPME_00246 Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 100 2.7e-220 1 394 1.0000 1.0000 experiment
JKPJIPME_00259 Hydrogen Peroxide (H2O2) [class: Peroxides] 100 3.4e-80 1 142 1.0000 1.0000 experiment
JKPJIPME_00260 Hydrogen Peroxide (H2O2) [class: Peroxides] 100 3.7e-76 1 137 1.0000 1.0000 experiment
JKPJIPME_00291 Chromium (Cr), Vanadium (V), Molybdenum (Mo), Methylene Blue [class: Thiazinium] 99.5 3.1e-105 1 188 1.0000 1.0000 experiment
JKPJIPME_00307 Arsenic (As) 100 1.9e-150 1 257 1.0000 1.0000 experiment
JKPJIPME_00308 Arsenic (As) 99.7 5.2e-160 1 296 1.0000 1.0000 experiment
JKPJIPME_00309 Arsenic (As) 100 3.1e-174 1 319 1.0000 1.0000 experiment
JKPJIPME_00310 Arsenic (As) 100 7.9e-200 1 346 1.0000 1.0000 experiment
JKPJIPME_00418 Magnesium (Mg), Cobalt (Co), Nickel (Ni), Manganese (Mn) 100 4.1e-179 1 316 1.0000 1.0000 experiment
JKPJIPME_00468 Cadmium (Cd), Zinc (Zn), Mercury (Hg) 100 5.4e-119 1 208 1.0000 1.0000 experiment
JKPJIPME_00532 Selenium (Se), Hydrogen Peroxide (H2O2) [class: Peroxides] 99.5 3.3e-121 1 206 1.0000 1.0000 experiment
JKPJIPME_00536 Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides] 94.7 1.3e-250 1 457 1.0000 1.0000 experiment
JKPJIPME_00537 Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides] 92.5 8.6e-106 2 200 0.9950 0.8578 experiment
JKPJIPME_00557 Antimony (Sb), Arsenic (As), Glycerol [class: Alcohol] 100 1.8e-162 1 281 1.0000 1.0000 experiment
JKPJIPME_00607 Hydrogen Peroxide (H2O2) [class: Peroxides], Sodium Deoxycholate (SDC) [class: Acid], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 96.1 1.3e-169 1 305 1.0000 1.0000 experiment
JKPJIPME_00655 Zinc (Zn), Lead (Pb) 85.6 1.7e-218 1 458 1.0153 1.0000 experiment
JKPJIPME_00656 Zinc (Zn) 99.8 2.4e-246 1 441 1.0000 1.0000 experiment
JKPJIPME_00711 Zinc (Zn) 99.3 1.3e-85 1 150 1.0000 0.8772 experiment
JKPJIPME_00736 Zinc (Zn), Cyclohexane [class: Cycloalkane] 100 5.5e-59 1 107 1.0000 1.0000 experiment
JKPJIPME_00737 Methyl Viologen [class: Paraquat] 100 1.2e-86 1 154 1.0000 1.0000 experiment
JKPJIPME_00744 Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] 99.8 2.7e-303 1 549 1.0000 1.0000 experiment
JKPJIPME_00761 Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] 99.7 2.4e-185 1 343 1.0000 1.0000 experiment
JKPJIPME_01000 Copper (Cu) 100 1.8e-60 1 112 1.0000 1.0000 experiment
JKPJIPME_01015 Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 100 2.4e-51 1 105 1.0000 1.0000 experiment
LOHMMKBF_00246 Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 100 2.7e-220 1 394 1.0000 1.0000 experiment
LOHMMKBF_00259 Hydrogen Peroxide (H2O2) [class: Peroxides] 100 3.4e-80 1 142 1.0000 1.0000 experiment
LOHMMKBF_00260 Hydrogen Peroxide (H2O2) [class: Peroxides] 100 3.7e-76 1 137 1.0000 1.0000 experiment
LOHMMKBF_00291 Chromium (Cr), Vanadium (V), Molybdenum (Mo), Methylene Blue [class: Thiazinium] 99.5 3.1e-105 1 188 1.0000 1.0000 experiment
LOHMMKBF_00307 Arsenic (As) 100 1.9e-150 1 257 1.0000 1.0000 experiment
LOHMMKBF_00308 Arsenic (As) 99.7 5.2e-160 1 296 1.0000 1.0000 experiment
LOHMMKBF_00309 Arsenic (As) 100 3.1e-174 1 319 1.0000 1.0000 experiment
LOHMMKBF_00310 Arsenic (As) 100 7.9e-200 1 346 1.0000 1.0000 experiment
LOHMMKBF_00418 Magnesium (Mg), Cobalt (Co), Nickel (Ni), Manganese (Mn) 100 4.1e-179 1 316 1.0000 1.0000 experiment
LOHMMKBF_00468 Cadmium (Cd), Zinc (Zn), Mercury (Hg) 100 5.4e-119 1 208 1.0000 1.0000 experiment
LOHMMKBF_00532 Selenium (Se), Hydrogen Peroxide (H2O2) [class: Peroxides] 99.5 3.3e-121 1 206 1.0000 1.0000 experiment
LOHMMKBF_00536 Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides] 94.7 1.3e-250 1 457 1.0000 1.0000 experiment
LOHMMKBF_00537 Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides] 92.5 8.6e-106 2 200 0.9950 0.8578 experiment
LOHMMKBF_00557 Antimony (Sb), Arsenic (As), Glycerol [class: Alcohol] 100 1.8e-162 1 281 1.0000 1.0000 experiment
LOHMMKBF_00607 Hydrogen Peroxide (H2O2) [class: Peroxides], Sodium Deoxycholate (SDC) [class: Acid], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 96.1 1.3e-169 1 305 1.0000 1.0000 experiment
LOHMMKBF_00655 Zinc (Zn), Lead (Pb) 85.6 1.7e-218 1 458 1.0153 1.0000 experiment
LOHMMKBF_00656 Zinc (Zn) 99.8 2.4e-246 1 441 1.0000 1.0000 experiment
LOHMMKBF_00711 Zinc (Zn) 99.3 1.3e-85 1 150 1.0000 0.8772 experiment
LOHMMKBF_00736 Zinc (Zn), Cyclohexane [class: Cycloalkane] 100 5.5e-59 1 107 1.0000 1.0000 experiment
LOHMMKBF_00737 Methyl Viologen [class: Paraquat] 100 1.2e-86 1 154 1.0000 1.0000 experiment
LOHMMKBF_00744 Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] 99.8 2.7e-303 1 549 1.0000 1.0000 experiment
LOHMMKBF_00761 Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] 99.7 2.4e-185 1 343 1.0000 1.0000 experiment
LOHMMKBF_01000 Copper (Cu) 100 1.8e-60 1 112 1.0000 1.0000 experiment
LOHMMKBF_01015 Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 100 2.4e-51 1 105 1.0000 1.0000 experiment
JKPJIPME_00246 Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 100 6.2e-218 1 394 1.0000 0.9949 prediction
JKPJIPME_00259 Hydrogen Peroxide (H2O2) [class: Peroxides] 100 7.7e-78 1 142 1.0000 0.8304 prediction
JKPJIPME_00260 Hydrogen Peroxide (H2O2) [class: Peroxides] 100 8.5e-74 1 137 1.0000 1.0000 prediction
JKPJIPME_00291 Chromium (Cr), Vanadium (V), Molybdenum (Mo), Methylene Blue [class: Thiazinium] 100 2.4e-103 1 188 1.0000 1.0000 prediction
JKPJIPME_00307 Arsenic (As) 100 4.4e-148 1 257 1.0000 1.0000 prediction
JKPJIPME_00308 Arsenic (As) 100 1.1e-158 1 296 1.0000 1.0000 prediction
JKPJIPME_00309 Arsenic (As) 100 7.1e-172 1 319 1.0000 1.0000 prediction
JKPJIPME_00310 Arsenic (As) 100 1.8e-197 1 346 1.0000 1.0000 prediction
JKPJIPME_00418 Magnesium (Mg), Cobalt (Co), Nickel (Ni), Manganese (Mn) 99.7 1.2e-176 1 316 1.0000 1.0000 prediction
JKPJIPME_00468 Cadmium (Cd), Zinc (Zn), Mercury (Hg) 100 1.2e-116 1 208 1.0000 0.9412 prediction
JKPJIPME_00532 Selenium (Se), Hydrogen Peroxide (H2O2) [class: Peroxides] 100 4.5e-119 1 206 1.0000 1.0000 prediction
JKPJIPME_00536 Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides] 99.8 3.2e-258 1 457 1.0000 1.0000 prediction
JKPJIPME_00537 Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides] 97 3.5e-108 2 200 0.9950 0.8578 prediction
JKPJIPME_00557 Antimony (Sb), Arsenic (As), Glycerol [class: Alcohol] 100 4.2e-160 1 281 1.0000 1.0000 prediction
JKPJIPME_00607 Hydrogen Peroxide (H2O2) [class: Peroxides], Sodium Deoxycholate (SDC) [class: Acid], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 99.7 2.1e-173 1 305 1.0000 1.0000 prediction
JKPJIPME_00654 Zinc (Zn) 99.3 5.7e-73 1 141 1.0000 1.0000 prediction
JKPJIPME_00655 Zinc (Zn), Lead (Pb) 100 1.9e-255 1 458 1.0000 1.0000 prediction
JKPJIPME_00656 Zinc (Zn) 100 1.1e-244 1 441 1.0000 1.0000 prediction
JKPJIPME_00711 Zinc (Zn) 100 9.9e-84 1 150 1.0000 0.8772 prediction
JKPJIPME_00736 Zinc (Zn), Cyclohexane [class: Cycloalkane] 100 1.3e-56 1 107 1.0000 1.0000 prediction
JKPJIPME_00737 Methyl Viologen [class: Paraquat] 100 2.7e-84 1 154 1.0000 1.0000 prediction
JKPJIPME_00744 Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] 100 2.8e-301 1 549 1.0000 1.0000 prediction
JKPJIPME_00761 Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] 100 1.5e-183 1 343 1.0000 1.0000 prediction
JKPJIPME_00787 Iron (Fe) 100 7e-200 1 366 1.0000 1.0000 prediction
JKPJIPME_00788 Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine] 100 5e-124 1 222 1.0000 1.0000 prediction
JKPJIPME_01000 Copper (Cu) 100 4.1e-58 1 112 1.0000 0.9825 prediction
JKPJIPME_01001 Copper (Cu) 100 6.8e-202 1 389 0.8984 0.7811 prediction
LOHMMKBF_00246 Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 100 6.2e-218 1 394 1.0000 0.9949 prediction
LOHMMKBF_00259 Hydrogen Peroxide (H2O2) [class: Peroxides] 100 7.7e-78 1 142 1.0000 0.8304 prediction
LOHMMKBF_00260 Hydrogen Peroxide (H2O2) [class: Peroxides] 100 8.5e-74 1 137 1.0000 1.0000 prediction
LOHMMKBF_00291 Chromium (Cr), Vanadium (V), Molybdenum (Mo), Methylene Blue [class: Thiazinium] 100 2.4e-103 1 188 1.0000 1.0000 prediction
LOHMMKBF_00307 Arsenic (As) 100 4.4e-148 1 257 1.0000 1.0000 prediction
LOHMMKBF_00308 Arsenic (As) 100 1.1e-158 1 296 1.0000 1.0000 prediction
LOHMMKBF_00309 Arsenic (As) 100 7.1e-172 1 319 1.0000 1.0000 prediction
LOHMMKBF_00310 Arsenic (As) 100 1.8e-197 1 346 1.0000 1.0000 prediction
LOHMMKBF_00418 Magnesium (Mg), Cobalt (Co), Nickel (Ni), Manganese (Mn) 99.7 1.2e-176 1 316 1.0000 1.0000 prediction
LOHMMKBF_00468 Cadmium (Cd), Zinc (Zn), Mercury (Hg) 100 1.2e-116 1 208 1.0000 0.9412 prediction
LOHMMKBF_00532 Selenium (Se), Hydrogen Peroxide (H2O2) [class: Peroxides] 100 4.5e-119 1 206 1.0000 1.0000 prediction
LOHMMKBF_00536 Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides] 99.8 3.2e-258 1 457 1.0000 1.0000 prediction
LOHMMKBF_00537 Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides] 97 3.5e-108 2 200 0.9950 0.8578 prediction
LOHMMKBF_00557 Antimony (Sb), Arsenic (As), Glycerol [class: Alcohol] 100 4.2e-160 1 281 1.0000 1.0000 prediction
LOHMMKBF_00607 Hydrogen Peroxide (H2O2) [class: Peroxides], Sodium Deoxycholate (SDC) [class: Acid], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] 99.7 2.1e-173 1 305 1.0000 1.0000 prediction
LOHMMKBF_00654 Zinc (Zn) 99.3 5.7e-73 1 141 1.0000 1.0000 prediction
LOHMMKBF_00655 Zinc (Zn), Lead (Pb) 100 1.9e-255 1 458 1.0000 1.0000 prediction
LOHMMKBF_00656 Zinc (Zn) 100 1.1e-244 1 441 1.0000 1.0000 prediction
LOHMMKBF_00711 Zinc (Zn) 100 9.9e-84 1 150 1.0000 0.8772 prediction
LOHMMKBF_00736 Zinc (Zn), Cyclohexane [class: Cycloalkane] 100 1.3e-56 1 107 1.0000 1.0000 prediction
LOHMMKBF_00737 Methyl Viologen [class: Paraquat] 100 2.7e-84 1 154 1.0000 1.0000 prediction
LOHMMKBF_00744 Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] 100 2.8e-301 1 549 1.0000 1.0000 prediction
LOHMMKBF_00761 Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] 100 1.5e-183 1 343 1.0000 1.0000 prediction
LOHMMKBF_00787 Iron (Fe) 100 7e-200 1 366 1.0000 1.0000 prediction
LOHMMKBF_00788 Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine] 100 5e-124 1 222 1.0000 1.0000 prediction
LOHMMKBF_01000 Copper (Cu) 100 4.1e-58 1 112 1.0000 0.9825 prediction
LOHMMKBF_01001 Copper (Cu) 100 6.8e-202 1 389 0.8984 0.7811 prediction






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism
JKPJIPME_00239 ARO:3003890 100 0 1 463 1.0000 1.0000 phosphonic acid antibiotic antibiotic-resistant UhpT antibiotic target alteration
JKPJIPME_00242 ARO:3003893 100 9.24e-139 1 196 1.0000 1.0000 phosphonic acid antibiotic antibiotic-resistant UhpT antibiotic target alteration
JKPJIPME_00275 ARO:3003303 100 0 1 804 1.0000 1.0000 aminocoumarin antibiotic aminocoumarin resistant gyrB antibiotic target alteration
JKPJIPME_00404 ARO:3003900 99.9 0 1 848 1.0000 1.0000 phosphonic acid antibiotic antibiotic-resistant cya adenylate cyclase antibiotic target alteration
JKPJIPME_00536 ARO:3000830 100 0 1 457 1.0000 1.0000 aminoglycoside antibiotic resistance-nodulation-cell division (RND) antibiotic efflux pump antibiotic efflux
JKPJIPME_00629 ARO:3003368 100 2.98e-291 1 393 0.9975 0.9975 elfamycin antibiotic elfamycin resistant EF-Tu antibiotic target alteration
JKPJIPME_00638 ARO:3003288 100 0 1 1342 1.0000 1.0000 rifamycin antibiotic rifamycin-resistant beta-subunit of RNA polymerase (rpoB) antibiotic target alteration
JKPJIPME_00698 ARO:3004126 99.5 1.24e-290 1 372 1.0000 0.8341 fluoroquinolone antibiotic Sugar Porin (SP) reduced permeability to antibiotic
JKPJIPME_00736 ARO:3003511 100 1.52e-76 1 107 1.0000 1.0000 fluoroquinolone antibiotic ATP-binding cassette (ABC) antibiotic efflux pump antibiotic target alteration
JKPJIPME_00737 ARO:3003381 100 7.23e-111 1 154 1.0000 1.0000 fluoroquinolone antibiotic ATP-binding cassette (ABC) antibiotic efflux pump antibiotic target alteration
JKPJIPME_00758 ARO:3003550 97.4 3.21e-262 1 390 1.0000 0.7992 nucleoside antibiotic major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
JKPJIPME_00760 ARO:3003549 99.3 0 1 683 1.0000 1.0000 nucleoside antibiotic major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
JKPJIPME_00761 ARO:3003548 99.7 4.46e-233 1 343 1.0000 1.0000 nucleoside antibiotic major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
JKPJIPME_00789 ARO:3003576 99.6 0 11 557 0.9820 1.0000 peptide antibiotic pmr phosphoethanolamine transferase antibiotic target alteration
JKPJIPME_01017 ARO:3006874 98.3 9.42e-258 39 382 0.9005 0.9125 cephalosporin EC beta-lactamase antibiotic inactivation
LOHMMKBF_00239 ARO:3003890 100 0 1 463 1.0000 1.0000 phosphonic acid antibiotic antibiotic-resistant UhpT antibiotic target alteration
LOHMMKBF_00242 ARO:3003893 100 9.24e-139 1 196 1.0000 1.0000 phosphonic acid antibiotic antibiotic-resistant UhpT antibiotic target alteration
LOHMMKBF_00275 ARO:3003303 100 0 1 804 1.0000 1.0000 aminocoumarin antibiotic aminocoumarin resistant gyrB antibiotic target alteration
LOHMMKBF_00404 ARO:3003900 99.9 0 1 848 1.0000 1.0000 phosphonic acid antibiotic antibiotic-resistant cya adenylate cyclase antibiotic target alteration
LOHMMKBF_00536 ARO:3000830 100 0 1 457 1.0000 1.0000 aminoglycoside antibiotic resistance-nodulation-cell division (RND) antibiotic efflux pump antibiotic efflux
LOHMMKBF_00629 ARO:3003368 100 2.98e-291 1 393 0.9975 0.9975 elfamycin antibiotic elfamycin resistant EF-Tu antibiotic target alteration
LOHMMKBF_00638 ARO:3003288 100 0 1 1342 1.0000 1.0000 rifamycin antibiotic rifamycin-resistant beta-subunit of RNA polymerase (rpoB) antibiotic target alteration
LOHMMKBF_00698 ARO:3004126 99.5 1.24e-290 1 372 1.0000 0.8341 fluoroquinolone antibiotic Sugar Porin (SP) reduced permeability to antibiotic
LOHMMKBF_00736 ARO:3003511 100 1.52e-76 1 107 1.0000 1.0000 fluoroquinolone antibiotic ATP-binding cassette (ABC) antibiotic efflux pump antibiotic target alteration
LOHMMKBF_00737 ARO:3003381 100 7.23e-111 1 154 1.0000 1.0000 fluoroquinolone antibiotic ATP-binding cassette (ABC) antibiotic efflux pump antibiotic target alteration
LOHMMKBF_00758 ARO:3003550 97.4 3.21e-262 1 390 1.0000 0.7992 nucleoside antibiotic major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
LOHMMKBF_00760 ARO:3003549 99.3 0 1 683 1.0000 1.0000 nucleoside antibiotic major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
LOHMMKBF_00761 ARO:3003548 99.7 4.46e-233 1 343 1.0000 1.0000 nucleoside antibiotic major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
LOHMMKBF_00789 ARO:3003576 99.6 0 11 557 0.9820 1.0000 peptide antibiotic pmr phosphoethanolamine transferase antibiotic target alteration
LOHMMKBF_01017 ARO:3006874 98.3 9.42e-258 39 382 0.9005 0.9125 cephalosporin EC beta-lactamase antibiotic inactivation






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
JKPJIPME_00041 PHI:4694 bcsA 92.1 0 2 722 0.9972 0.9920 rodents salmonellosis cellulose synthesis regulation increased virulence (hypervirulence)
JKPJIPME_00042 PHI:4694 bcsA 70.5 8e-60 1 146 0.9799 0.9920 rodents salmonellosis cellulose synthesis regulation increased virulence (hypervirulence)
JKPJIPME_00045 PHI:11602 bcsE 70.9 1.5e-32 1 86 0.9556 0.9847 rodents infection cyclic di-GMP binding protein reduced virulence
JKPJIPME_00046 PHI:11602 bcsE 81.6 1.3e-211 1 429 1.0000 0.9847 rodents infection cyclic di-GMP binding protein reduced virulence
JKPJIPME_00074 PHI:7263 cspE 71.6 9.7e-24 4 70 0.9571 0.9710 primates salmonellosis cold shock protein reduced virulence
JKPJIPME_00080 PHI:11169 ataT 100 1.5e-17 1 37 0.8222 0.9154 primates neonatal sepsis; neonatal meningitis Gcn5-related N-acetyltransferase (GNAT) family toxin reduced virulence
JKPJIPME_00081 PHI:11169 ataT 99.6 1.7e-149 35 300 0.8867 0.9154 primates neonatal sepsis; neonatal meningitis Gcn5-related N-acetyltransferase (GNAT) family toxin reduced virulence
JKPJIPME_00092 PHI:9246 malS 80.3 1.3e-291 1 575 0.9897 0.9437 primates salmonellosis regulatory non-coding RNA reduced virulence
JKPJIPME_00093 PHI:9246 malS 81 1.7e-27 1 63 1.0000 0.9437 primates salmonellosis regulatory non-coding RNA reduced virulence
JKPJIPME_00154 PHI:11412 pgm 79.2 1.8e-142 1 321 0.9251 0.9806 rodents plague 2,3-bisphosphoglycerate-independent phosphoglycerate mutase increased virulence (hypervirulence)
JKPJIPME_00155 PHI:11412 pgm 92.6 6.5e-40 1 81 1.0000 0.9806 rodents plague 2,3-bisphosphoglycerate-independent phosphoglycerate mutase increased virulence (hypervirulence)
JKPJIPME_00156 PHI:11412 pgm 85.4 5.1e-45 2 104 0.9904 0.9806 rodents plague 2,3-bisphosphoglycerate-independent phosphoglycerate mutase increased virulence (hypervirulence)
JKPJIPME_00157 PHI:5573 envC 92.1 1.7e-203 3 419 0.9952 0.9766 rodents salmonellosis determinants for intrinsic CAMP resistance reduced virulence
JKPJIPME_00166 PHI:9594 rfaC 85.8 1.7e-117 1 233 0.9873 0.9590 even-toed ungulates salmonellosis heptosyl transferase reduced virulence
JKPJIPME_00167 PHI:9594 rfaC 81.7 1.7e-27 1 71 0.8659 0.9590 even-toed ungulates salmonellosis heptosyl transferase reduced virulence
JKPJIPME_00189 PHI:7662 pyrE 96.2 4.7e-114 1 213 1.0000 1.0000 birds salmonellosis orotate phosphoribosyltransferase reduced virulence
JKPJIPME_00216 PHI:123920 spoT 100 0 1 702 1.0000 1.0000 nematodes neonatal meningitis bifunctional (p)ppGpp synthase/hydrolase SpoT reduced virulence
JKPJIPME_00221 PHI:123647 gltS 99.8 3.4e-214 1 401 1.0000 1.0000 rodents neonatal meningitis regulatory protein unaffected pathogenicity
JKPJIPME_00223 PHI:9177 HilE (STM14_4514) 80.4 1.7e-272 1 567 0.9965 0.9965 rodents salmonellosis putative inner membrane protein reduced virulence
JKPJIPME_00235 PHI:10919 EaAdeP (EAMY 3685) 70.5 3.1e-108 1 285 1.0000 0.9908 eudicots fire blight putative AzgA family transporter reduced virulence
JKPJIPME_00236 PHI:10919 EaAdeP (EAMY 3685) 83.7 1.6e-61 14 154 0.8924 0.9908 eudicots fire blight putative AzgA family transporter reduced virulence
JKPJIPME_00285 PHI:7966 tnaA 99.4 9e-275 1 470 1.0000 1.0000 nematodes urinary tract infection tryptophanase reduced virulence
JKPJIPME_00292 PHI:10919 EaAdeP (EAMY 3685) 83.7 2e-182 1 404 1.0000 0.9908 eudicots fire blight putative AzgA family transporter reduced virulence
JKPJIPME_00305 PHI:4630 PafR 99.6 3.6e-154 1 278 1.0000 1.0000 rodents urinary tract infection transcription regulator reduced virulence
JKPJIPME_00306 PHI:123166 phoU 95.8 3.2e-127 1 238 0.9876 0.9876 rodents salmonellosis phosphate-specific transport system accessory protein PhoU reduced virulence
JKPJIPME_00316 PHI:9308 glmS 84.1 8.3e-297 1 609 1.0000 1.0000 eudicots fire blight glucosamine-fructose-6-phosphateaminotransferase reduced virulence
JKPJIPME_00326 PHI:9436 atpB 96.3 9.2e-147 1 271 1.0000 1.0000 rodents gastroenteritis F0F1 ATP synthase subunit A reduced virulence
JKPJIPME_00357 PHI:7572 yfiB 76 4.9e-218 1 505 0.9980 0.9980 nematodes pneumonia outer membrane lipoprotein which acts as a sensor of YfiBNR system unaffected pathogenicity
JKPJIPME_00364 PHI:9318 ilvA 84.5 1.9e-114 1 245 0.9879 0.9455 eudicots fire blight threonine dehydratase reduced virulence
JKPJIPME_00365 PHI:9318 ilvA 84.6 5.9e-121 1 241 1.0000 0.9455 eudicots fire blight threonine dehydratase reduced virulence
JKPJIPME_00369 PHI:11419 ppiC 94.6 4.1e-46 1 92 0.9892 0.9892 rodents salmonellosis peptidyl-prolyl cis-trans isomerase reduced virulence
JKPJIPME_00376 PHI:2644 thioredoxin 1 100 4.5e-60 1 109 1.0000 1.0000 nematodes food poisoning redox activity reduced virulence
JKPJIPME_00379 PHI:4074 wecA 77.7 5.2e-161 1 358 0.9755 0.9421 moths hemolymph bleeding virulence factor reduced virulence
JKPJIPME_00418 PHI:2479 corA 88.6 1.2e-161 1 316 1.0000 1.0000 eudicots soft rot magnesium/nickel/cobalt transporter reduced virulence
JKPJIPME_00421 PHI:2479 corA 89.6 3.9e-22 20 67 0.7164 1.0000 eudicots soft rot magnesium/nickel/cobalt transporter reduced virulence
JKPJIPME_00433 PHI:10576 PccS1_001441 85.2 1.3e-155 1 310 0.9779 0.9968 monocots soft rot transcriptional regulator, LysR family, MetR unaffected pathogenicity
JKPJIPME_00434 PHI:9315 metE 92 2e-45 1 88 0.9778 0.9590 eudicots fire blight 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase reduced virulence
JKPJIPME_00435 PHI:9315 metE 84.3 0 1 637 0.9969 0.9590 eudicots fire blight 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase reduced virulence
JKPJIPME_00443 PHI:10981 tatA 98.9 3.2e-40 1 89 1.0000 1.0000 rodents infection Sec-independent protein translocase protein reduced virulence
JKPJIPME_00444 PHI:10982 tatB 100 1.4e-84 1 171 1.0000 1.0000 rodents infection Sec-independent protein translocase protein reduced virulence
JKPJIPME_00445 PHI:10983 tatC 100 4.4e-138 1 258 1.0000 1.0000 rodents infection Sec-independent protein translocase protein reduced virulence
JKPJIPME_00467 PHI:8692 rdoA (ROD_39001) 84.8 3.8e-171 1 328 1.0000 1.0000 rodents colitis putative regulatory protein kinase unaffected pathogenicity
JKPJIPME_00468 PHI:8691 dsbA (ROD_38991) 87 8.8e-105 1 208 1.0000 1.0000 rodents colitis thiol:disulfide interchange protein loss of pathogenicity
JKPJIPME_00476 PHI:10176 yshB 91.7 3.4e-12 1 36 1.0000 1.0000 rodents None conserved sORF reduced virulence
JKPJIPME_00479 PHI:7742 glnA 98.1 1.5e-274 1 469 1.0000 1.0000 primates salmonellosis glutamine synthetase reduced virulence
JKPJIPME_00480 PHI:11030 bipA 88.9 0 1 606 0.9984 0.9984 rodents pneumonic plague putative GTPase reduced virulence
JKPJIPME_00486 PHI:6544 yshA 90.4 1.1e-67 1 125 1.0000 0.9391 rodents salmonellosis O-antigen capsule unaffected pathogenicity
JKPJIPME_00487 PHI:6544 yshA 83.5 5.2e-41 1 91 0.9785 0.9391 rodents salmonellosis O-antigen capsule unaffected pathogenicity
JKPJIPME_00488 PHI:6543 yihO 79.9 4.1e-126 1 275 1.0000 0.9958 rodents salmonellosis O-antigen capsule unaffected pathogenicity
JKPJIPME_00489 PHI:6543 yihO 81.7 7.4e-85 1 186 0.9254 0.9958 rodents salmonellosis O-antigen capsule unaffected pathogenicity
JKPJIPME_00499 PHI:6545 yihW 88.6 1.4e-123 1 255 0.9770 0.9551 rodents salmonellosis O-antigen capsule unaffected pathogenicity
JKPJIPME_00514 PHI:10994 fdoG 100 5.6e-100 8 180 0.9611 0.9163 rodents infection formate dehydrogenase-O major subunit unaffected pathogenicity
JKPJIPME_00515 PHI:10994 fdoG 99.2 0 1 636 0.9907 0.9163 rodents infection formate dehydrogenase-O major subunit unaffected pathogenicity
JKPJIPME_00516 PHI:10994 fdoG 100 1.4e-71 5 131 0.9695 0.9163 rodents infection formate dehydrogenase-O major subunit unaffected pathogenicity
JKPJIPME_00532 PHI:11376 sodA 98.1 1.4e-118 1 206 1.0000 1.0000 moths salmonellosis cytoplasmic superoxide dismutase reduced virulence
JKPJIPME_00536 PHI:8513 cpxA 98.7 3.7e-257 1 457 1.0000 1.0000 rodents colitis two-component sensor kinase loss of pathogenicity
JKPJIPME_00537 PHI:4523 CpxR 97 2.5e-109 2 200 0.9950 1.0000 rodents urinary tract infection response regulator (CpxR)-sensor kinase reduced virulence
JKPJIPME_00538 PHI:4523 CpxR 100 5.7e-17 1 41 0.9111 1.0000 rodents urinary tract infection response regulator (CpxR)-sensor kinase reduced virulence
JKPJIPME_00539 PHI:8515 cpxP 88.6 7.1e-73 1 166 1.0000 1.0000 rodents colitis periplasmic protein unaffected pathogenicity
JKPJIPME_00543 PHI:9309 pfkA 90.8 1.4e-66 1 131 0.9161 0.8250 eudicots fire blight ATP-dependent 6-phosphofructokinase reduced virulence
JKPJIPME_00544 PHI:9309 pfkA 83.5 4.8e-64 1 133 0.9925 0.8250 eudicots fire blight ATP-dependent 6-phosphofructokinase reduced virulence
JKPJIPME_00575 PHI:123640 metJ 100 1e-56 1 105 1.0000 1.0000 rodents neonatal meningitis regulatory protein reduced virulence
JKPJIPME_00576 PHI:9314 metB 87.1 1.3e-160 1 318 0.9755 0.8238 eudicots fire blight cystathionine gamma-synthase reduced virulence
JKPJIPME_00581 PHI:9325 metF 87.2 1.8e-156 1 296 1.0000 0.9834 eudicots fire blight methylenetetrahydrofolate reductase unaffected pathogenicity
JKPJIPME_00582 PHI:11381 katG 92 0 1 725 0.9986 0.9986 moths salmonellosis catalase reduced virulence
JKPJIPME_00599 PHI:9322 ppc 87.1 3.2e-173 1 333 1.0000 0.9977 eudicots fire blight phosphoenolpyruvate carboxylase unaffected pathogenicity
JKPJIPME_00600 PHI:9322 ppc 81.4 1.3e-264 1 548 0.9964 0.9977 eudicots fire blight phosphoenolpyruvate carboxylase unaffected pathogenicity
JKPJIPME_00607 PHI:3714 OxyR 100 9e-175 1 305 1.0000 1.0000 rodents urinary tract infection oxidative stress response regulator reduced virulence
JKPJIPME_00629 PHI:10282 tufA 75.1 6e-179 1 393 0.9975 0.9975 primates skin infection; food poisoning; respiratory disease elongation factor Tu increased virulence (hypervirulence)
JKPJIPME_00638 PHI:7860 RpoB 70.9 0 1 1338 0.9970 1.0000 nematodes nosocomial infection beta-subunit of the RNA polymerase reduced virulence
JKPJIPME_00652 PHI:3074 hupA 94.4 9.5e-40 1 90 1.0000 1.0000 bony fishes hemorrhagic septicemia nucleoid-associated protein, is a basic DNA-binding protein involved in gene regulation reduced virulence
JKPJIPME_00664 PHI:9313 metA 84.5 7e-159 1 309 1.0000 1.0000 eudicots fire blight homoserine O-succinyltransferase reduced virulence
JKPJIPME_00685 PHI:9310 pgi 83.6 8.3e-280 1 548 0.9982 1.0000 eudicots fire blight glucose-6-phosphate isomerase reduced virulence
JKPJIPME_00699 PHI:123650 malM 99.7 7.7e-166 1 306 1.0000 1.0000 rodents neonatal meningitis regulatory protein unaffected pathogenicity
JKPJIPME_00716 PHI:7661 pspG 82.5 1.1e-26 1 80 1.0000 1.0000 rodents salmonellosis phage-shock protein unaffected pathogenicity
JKPJIPME_00744 PHI:9229 actP 99.8 4.5e-302 1 549 1.0000 1.0000 birds avian colisepticemia acetate/glycolate:cation symporter reduced virulence
JKPJIPME_00745 PHI:9228 yjcH 100 9.3e-55 1 104 1.0000 1.0000 birds avian colisepticemia conserved inner membrane protein reduced virulence
JKPJIPME_00746 PHI:9227 acs 100 0 1 652 1.0000 1.0000 birds avian colisepticemia acetyl-coenzyme A synthetase reduced virulence
JKPJIPME_00749 PHI:10999 nrfC 100 1.5e-134 1 223 1.0000 1.0000 rodents infection putative menaquinol-cytochrome c reductase 4Fe-4S subunit unaffected pathogenicity
JKPJIPME_00754 PHI:124242 gltP 99.5 3.3e-231 1 437 1.0000 1.0000 rodents neonatal meningitis glutamate transporters reduced virulence
JKPJIPME_00788 PHI:4497 PmrA 90.5 3.8e-114 1 222 1.0000 1.0000 rodents salmonellosis lipopolysaccharide modification regulator increased virulence (hypervirulence)
JKPJIPME_00799 PHI:10047 fumB 94.7 5.2e-104 1 190 1.0000 0.9234 rodents salmonellosis fumarate hydratase class I reduced virulence
JKPJIPME_00800 PHI:10047 fumB 91.5 6.3e-171 1 316 0.9906 0.9234 rodents salmonellosis fumarate hydratase class I reduced virulence
JKPJIPME_00803 PHI:123638 DcuR 88.7 1.7e-123 1 239 1.0000 1.0000 birds pullorum disease two-component system increased virulence (hypervirulence)
JKPJIPME_00814 PHI:11871 cadB 83.1 5.1e-211 1 443 0.9977 1.0000 primates edwardsiellosis lysine-dependent acid resistance (LDAR) system membrane protein reduced virulence
JKPJIPME_00922 PHI:9197 z4861 97.8 0 22 757 0.9723 0.9534 rodents urinary tract infection hypothetical protein reduced virulence
JKPJIPME_01001 PHI:123643 dcuA 100 1.4e-229 1 433 1.0000 1.0000 rodents neonatal meningitis regulatory protein unaffected pathogenicity
JKPJIPME_01012 PHI:6420 EF-P 98.9 4.2e-106 1 188 1.0000 1.0000 rodents salmonellosis elongation factor increased virulence (hypervirulence)
JKPJIPME_01017 PHI:6133 blaCMY-2 76.5 4.4e-163 39 382 0.9005 0.9029 rodents salmonellosis beta-lactamase reduced virulence
JKPJIPME_01021 PHI:2960 frdA 84.2 2.2e-269 1 526 1.0000 0.9583 bony fishes enteric septicemia fumarate reductase reduced virulence
JKPJIPME_01022 PHI:2960 frdA 90.2 2.7e-18 1 51 0.7286 0.9583 bony fishes enteric septicemia fumarate reductase reduced virulence
JKPJIPME_01039 PHI:2687 hfq 94.1 1.4e-47 1 102 1.0000 1.0000 rodents food poisoning regulators of systemic infection reduced virulence
JKPJIPME_01047 PHI:2625 purA 97.4 1.1e-36 3 79 0.9747 0.7037 rodents food poisoning pathogenicity island reduced virulence
JKPJIPME_01048 PHI:2625 purA 99.1 1.6e-131 4 229 0.9869 0.7037 rodents food poisoning pathogenicity island reduced virulence
JKPJIPME_01049 PHI:12252 nsrR 77.3 5.1e-56 1 141 1.0000 0.9456 monocots Stewart's wilt; leaf blight (maize) DNA-binding transcriptional regulator unaffected pathogenicity
JKPJIPME_01102 PHI:7020 cpdB 99.6 6.8e-275 1 463 1.0000 0.9768 birds colibacillosis 2′,3′-cyclic phosphodiesterase reduced virulence
JKPJIPME_01103 PHI:7020 cpdB 100 2.6e-92 1 169 0.9037 0.9768 birds colibacillosis 2′,3′-cyclic phosphodiesterase reduced virulence
LOHMMKBF_00041 PHI:4694 bcsA 92.1 0 2 722 0.9972 0.9920 rodents salmonellosis cellulose synthesis regulation increased virulence (hypervirulence)
LOHMMKBF_00042 PHI:4694 bcsA 70.5 8e-60 1 146 0.9799 0.9920 rodents salmonellosis cellulose synthesis regulation increased virulence (hypervirulence)
LOHMMKBF_00045 PHI:11602 bcsE 70.9 1.5e-32 1 86 0.9556 0.9847 rodents infection cyclic di-GMP binding protein reduced virulence
LOHMMKBF_00046 PHI:11602 bcsE 81.6 1.3e-211 1 429 1.0000 0.9847 rodents infection cyclic di-GMP binding protein reduced virulence
LOHMMKBF_00074 PHI:7263 cspE 71.6 9.7e-24 4 70 0.9571 0.9710 primates salmonellosis cold shock protein reduced virulence
LOHMMKBF_00080 PHI:11169 ataT 100 1.5e-17 1 37 0.8222 0.9154 primates neonatal sepsis; neonatal meningitis Gcn5-related N-acetyltransferase (GNAT) family toxin reduced virulence
LOHMMKBF_00081 PHI:11169 ataT 99.6 1.7e-149 35 300 0.8867 0.9154 primates neonatal sepsis; neonatal meningitis Gcn5-related N-acetyltransferase (GNAT) family toxin reduced virulence
LOHMMKBF_00092 PHI:9246 malS 80.3 1.3e-291 1 575 0.9897 0.9437 primates salmonellosis regulatory non-coding RNA reduced virulence
LOHMMKBF_00093 PHI:9246 malS 81 1.7e-27 1 63 1.0000 0.9437 primates salmonellosis regulatory non-coding RNA reduced virulence
LOHMMKBF_00154 PHI:11412 pgm 79.2 1.8e-142 1 321 0.9251 0.9806 rodents plague 2,3-bisphosphoglycerate-independent phosphoglycerate mutase increased virulence (hypervirulence)
LOHMMKBF_00155 PHI:11412 pgm 92.6 6.5e-40 1 81 1.0000 0.9806 rodents plague 2,3-bisphosphoglycerate-independent phosphoglycerate mutase increased virulence (hypervirulence)
LOHMMKBF_00156 PHI:11412 pgm 85.4 5.1e-45 2 104 0.9904 0.9806 rodents plague 2,3-bisphosphoglycerate-independent phosphoglycerate mutase increased virulence (hypervirulence)
LOHMMKBF_00157 PHI:5573 envC 92.1 1.7e-203 3 419 0.9952 0.9766 rodents salmonellosis determinants for intrinsic CAMP resistance reduced virulence
LOHMMKBF_00166 PHI:9594 rfaC 85.8 1.7e-117 1 233 0.9873 0.9590 even-toed ungulates salmonellosis heptosyl transferase reduced virulence
LOHMMKBF_00167 PHI:9594 rfaC 81.7 1.7e-27 1 71 0.8659 0.9590 even-toed ungulates salmonellosis heptosyl transferase reduced virulence
LOHMMKBF_00189 PHI:7662 pyrE 96.2 4.7e-114 1 213 1.0000 1.0000 birds salmonellosis orotate phosphoribosyltransferase reduced virulence
LOHMMKBF_00216 PHI:123920 spoT 100 0 1 702 1.0000 1.0000 nematodes neonatal meningitis bifunctional (p)ppGpp synthase/hydrolase SpoT reduced virulence
LOHMMKBF_00221 PHI:123647 gltS 99.8 3.4e-214 1 401 1.0000 1.0000 rodents neonatal meningitis regulatory protein unaffected pathogenicity
LOHMMKBF_00223 PHI:9177 HilE (STM14_4514) 80.4 1.7e-272 1 567 0.9965 0.9965 rodents salmonellosis putative inner membrane protein reduced virulence
LOHMMKBF_00235 PHI:10919 EaAdeP (EAMY 3685) 70.5 3.1e-108 1 285 1.0000 0.9908 eudicots fire blight putative AzgA family transporter reduced virulence
LOHMMKBF_00236 PHI:10919 EaAdeP (EAMY 3685) 83.7 1.6e-61 14 154 0.8924 0.9908 eudicots fire blight putative AzgA family transporter reduced virulence
LOHMMKBF_00285 PHI:7966 tnaA 99.4 9e-275 1 470 1.0000 1.0000 nematodes urinary tract infection tryptophanase reduced virulence
LOHMMKBF_00292 PHI:10919 EaAdeP (EAMY 3685) 83.7 2e-182 1 404 1.0000 0.9908 eudicots fire blight putative AzgA family transporter reduced virulence
LOHMMKBF_00305 PHI:4630 PafR 99.6 3.6e-154 1 278 1.0000 1.0000 rodents urinary tract infection transcription regulator reduced virulence
LOHMMKBF_00306 PHI:123166 phoU 95.8 3.2e-127 1 238 0.9876 0.9876 rodents salmonellosis phosphate-specific transport system accessory protein PhoU reduced virulence
LOHMMKBF_00316 PHI:9308 glmS 84.1 8.3e-297 1 609 1.0000 1.0000 eudicots fire blight glucosamine-fructose-6-phosphateaminotransferase reduced virulence
LOHMMKBF_00326 PHI:9436 atpB 96.3 9.2e-147 1 271 1.0000 1.0000 rodents gastroenteritis F0F1 ATP synthase subunit A reduced virulence
LOHMMKBF_00357 PHI:7572 yfiB 76 4.9e-218 1 505 0.9980 0.9980 nematodes pneumonia outer membrane lipoprotein which acts as a sensor of YfiBNR system unaffected pathogenicity
LOHMMKBF_00364 PHI:9318 ilvA 84.5 1.9e-114 1 245 0.9879 0.9455 eudicots fire blight threonine dehydratase reduced virulence
LOHMMKBF_00365 PHI:9318 ilvA 84.6 5.9e-121 1 241 1.0000 0.9455 eudicots fire blight threonine dehydratase reduced virulence
LOHMMKBF_00369 PHI:11419 ppiC 94.6 4.1e-46 1 92 0.9892 0.9892 rodents salmonellosis peptidyl-prolyl cis-trans isomerase reduced virulence
LOHMMKBF_00376 PHI:2644 thioredoxin 1 100 4.5e-60 1 109 1.0000 1.0000 nematodes food poisoning redox activity reduced virulence
LOHMMKBF_00379 PHI:4074 wecA 77.7 5.2e-161 1 358 0.9755 0.9421 moths hemolymph bleeding virulence factor reduced virulence
LOHMMKBF_00418 PHI:2479 corA 88.6 1.2e-161 1 316 1.0000 1.0000 eudicots soft rot magnesium/nickel/cobalt transporter reduced virulence
LOHMMKBF_00421 PHI:2479 corA 89.6 3.9e-22 20 67 0.7164 1.0000 eudicots soft rot magnesium/nickel/cobalt transporter reduced virulence
LOHMMKBF_00433 PHI:10576 PccS1_001441 85.2 1.3e-155 1 310 0.9779 0.9968 monocots soft rot transcriptional regulator, LysR family, MetR unaffected pathogenicity
LOHMMKBF_00434 PHI:9315 metE 92 2e-45 1 88 0.9778 0.9590 eudicots fire blight 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase reduced virulence
LOHMMKBF_00435 PHI:9315 metE 84.3 0 1 637 0.9969 0.9590 eudicots fire blight 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase reduced virulence
LOHMMKBF_00443 PHI:10981 tatA 98.9 3.2e-40 1 89 1.0000 1.0000 rodents infection Sec-independent protein translocase protein reduced virulence
LOHMMKBF_00444 PHI:10982 tatB 100 1.4e-84 1 171 1.0000 1.0000 rodents infection Sec-independent protein translocase protein reduced virulence
LOHMMKBF_00445 PHI:10983 tatC 100 4.4e-138 1 258 1.0000 1.0000 rodents infection Sec-independent protein translocase protein reduced virulence
LOHMMKBF_00467 PHI:8692 rdoA (ROD_39001) 84.8 3.8e-171 1 328 1.0000 1.0000 rodents colitis putative regulatory protein kinase unaffected pathogenicity
LOHMMKBF_00468 PHI:8691 dsbA (ROD_38991) 87 8.8e-105 1 208 1.0000 1.0000 rodents colitis thiol:disulfide interchange protein loss of pathogenicity
LOHMMKBF_00476 PHI:10176 yshB 91.7 3.4e-12 1 36 1.0000 1.0000 rodents None conserved sORF reduced virulence
LOHMMKBF_00479 PHI:7742 glnA 98.1 1.5e-274 1 469 1.0000 1.0000 primates salmonellosis glutamine synthetase reduced virulence
LOHMMKBF_00480 PHI:11030 bipA 88.9 0 1 606 0.9984 0.9984 rodents pneumonic plague putative GTPase reduced virulence
LOHMMKBF_00486 PHI:6544 yshA 90.4 1.1e-67 1 125 1.0000 0.9391 rodents salmonellosis O-antigen capsule unaffected pathogenicity
LOHMMKBF_00487 PHI:6544 yshA 83.5 5.2e-41 1 91 0.9785 0.9391 rodents salmonellosis O-antigen capsule unaffected pathogenicity
LOHMMKBF_00488 PHI:6543 yihO 79.9 4.1e-126 1 275 1.0000 0.9958 rodents salmonellosis O-antigen capsule unaffected pathogenicity
LOHMMKBF_00489 PHI:6543 yihO 81.7 7.4e-85 1 186 0.9254 0.9958 rodents salmonellosis O-antigen capsule unaffected pathogenicity
LOHMMKBF_00499 PHI:6545 yihW 88.6 1.4e-123 1 255 0.9770 0.9551 rodents salmonellosis O-antigen capsule unaffected pathogenicity
LOHMMKBF_00514 PHI:10994 fdoG 100 5.6e-100 8 180 0.9611 0.9163 rodents infection formate dehydrogenase-O major subunit unaffected pathogenicity
LOHMMKBF_00515 PHI:10994 fdoG 99.2 0 1 636 0.9907 0.9163 rodents infection formate dehydrogenase-O major subunit unaffected pathogenicity
LOHMMKBF_00516 PHI:10994 fdoG 100 1.4e-71 5 131 0.9695 0.9163 rodents infection formate dehydrogenase-O major subunit unaffected pathogenicity
LOHMMKBF_00532 PHI:11376 sodA 98.1 1.4e-118 1 206 1.0000 1.0000 moths salmonellosis cytoplasmic superoxide dismutase reduced virulence
LOHMMKBF_00536 PHI:8513 cpxA 98.7 3.7e-257 1 457 1.0000 1.0000 rodents colitis two-component sensor kinase loss of pathogenicity
LOHMMKBF_00537 PHI:4523 CpxR 97 2.5e-109 2 200 0.9950 1.0000 rodents urinary tract infection response regulator (CpxR)-sensor kinase reduced virulence
LOHMMKBF_00538 PHI:4523 CpxR 100 5.7e-17 1 41 0.9111 1.0000 rodents urinary tract infection response regulator (CpxR)-sensor kinase reduced virulence
LOHMMKBF_00539 PHI:8515 cpxP 88.6 7.1e-73 1 166 1.0000 1.0000 rodents colitis periplasmic protein unaffected pathogenicity
LOHMMKBF_00543 PHI:9309 pfkA 90.8 1.4e-66 1 131 0.9161 0.8250 eudicots fire blight ATP-dependent 6-phosphofructokinase reduced virulence
LOHMMKBF_00544 PHI:9309 pfkA 83.5 4.8e-64 1 133 0.9925 0.8250 eudicots fire blight ATP-dependent 6-phosphofructokinase reduced virulence
LOHMMKBF_00575 PHI:123640 metJ 100 1e-56 1 105 1.0000 1.0000 rodents neonatal meningitis regulatory protein reduced virulence
LOHMMKBF_00576 PHI:9314 metB 87.1 1.3e-160 1 318 0.9755 0.8238 eudicots fire blight cystathionine gamma-synthase reduced virulence
LOHMMKBF_00581 PHI:9325 metF 87.2 1.8e-156 1 296 1.0000 0.9834 eudicots fire blight methylenetetrahydrofolate reductase unaffected pathogenicity
LOHMMKBF_00582 PHI:11381 katG 92 0 1 725 0.9986 0.9986 moths salmonellosis catalase reduced virulence
LOHMMKBF_00599 PHI:9322 ppc 87.1 3.2e-173 1 333 1.0000 0.9977 eudicots fire blight phosphoenolpyruvate carboxylase unaffected pathogenicity
LOHMMKBF_00600 PHI:9322 ppc 81.4 1.3e-264 1 548 0.9964 0.9977 eudicots fire blight phosphoenolpyruvate carboxylase unaffected pathogenicity
LOHMMKBF_00607 PHI:3714 OxyR 100 9e-175 1 305 1.0000 1.0000 rodents urinary tract infection oxidative stress response regulator reduced virulence
LOHMMKBF_00629 PHI:10282 tufA 75.1 6e-179 1 393 0.9975 0.9975 primates skin infection; food poisoning; respiratory disease elongation factor Tu increased virulence (hypervirulence)
LOHMMKBF_00638 PHI:7860 RpoB 70.9 0 1 1338 0.9970 1.0000 nematodes nosocomial infection beta-subunit of the RNA polymerase reduced virulence
LOHMMKBF_00652 PHI:3074 hupA 94.4 9.5e-40 1 90 1.0000 1.0000 bony fishes hemorrhagic septicemia nucleoid-associated protein, is a basic DNA-binding protein involved in gene regulation reduced virulence
LOHMMKBF_00664 PHI:9313 metA 84.5 7e-159 1 309 1.0000 1.0000 eudicots fire blight homoserine O-succinyltransferase reduced virulence
LOHMMKBF_00685 PHI:9310 pgi 83.6 8.3e-280 1 548 0.9982 1.0000 eudicots fire blight glucose-6-phosphate isomerase reduced virulence
LOHMMKBF_00699 PHI:123650 malM 99.7 7.7e-166 1 306 1.0000 1.0000 rodents neonatal meningitis regulatory protein unaffected pathogenicity
LOHMMKBF_00716 PHI:7661 pspG 82.5 1.1e-26 1 80 1.0000 1.0000 rodents salmonellosis phage-shock protein unaffected pathogenicity
LOHMMKBF_00744 PHI:9229 actP 99.8 4.5e-302 1 549 1.0000 1.0000 birds avian colisepticemia acetate/glycolate:cation symporter reduced virulence
LOHMMKBF_00745 PHI:9228 yjcH 100 9.3e-55 1 104 1.0000 1.0000 birds avian colisepticemia conserved inner membrane protein reduced virulence
LOHMMKBF_00746 PHI:9227 acs 100 0 1 652 1.0000 1.0000 birds avian colisepticemia acetyl-coenzyme A synthetase reduced virulence
LOHMMKBF_00749 PHI:10999 nrfC 100 1.5e-134 1 223 1.0000 1.0000 rodents infection putative menaquinol-cytochrome c reductase 4Fe-4S subunit unaffected pathogenicity
LOHMMKBF_00754 PHI:124242 gltP 99.5 3.3e-231 1 437 1.0000 1.0000 rodents neonatal meningitis glutamate transporters reduced virulence
LOHMMKBF_00788 PHI:4497 PmrA 90.5 3.8e-114 1 222 1.0000 1.0000 rodents salmonellosis lipopolysaccharide modification regulator increased virulence (hypervirulence)
LOHMMKBF_00799 PHI:10047 fumB 94.7 5.2e-104 1 190 1.0000 0.9234 rodents salmonellosis fumarate hydratase class I reduced virulence
LOHMMKBF_00800 PHI:10047 fumB 91.5 6.3e-171 1 316 0.9906 0.9234 rodents salmonellosis fumarate hydratase class I reduced virulence
LOHMMKBF_00803 PHI:123638 DcuR 88.7 1.7e-123 1 239 1.0000 1.0000 birds pullorum disease two-component system increased virulence (hypervirulence)
LOHMMKBF_00814 PHI:11871 cadB 83.1 5.1e-211 1 443 0.9977 1.0000 primates edwardsiellosis lysine-dependent acid resistance (LDAR) system membrane protein reduced virulence
LOHMMKBF_00922 PHI:9197 z4861 97.8 0 22 757 0.9723 0.9534 rodents urinary tract infection hypothetical protein reduced virulence
LOHMMKBF_01001 PHI:123643 dcuA 100 1.4e-229 1 433 1.0000 1.0000 rodents neonatal meningitis regulatory protein unaffected pathogenicity
LOHMMKBF_01012 PHI:6420 EF-P 98.9 4.2e-106 1 188 1.0000 1.0000 rodents salmonellosis elongation factor increased virulence (hypervirulence)
LOHMMKBF_01017 PHI:6133 blaCMY-2 76.5 4.4e-163 39 382 0.9005 0.9029 rodents salmonellosis beta-lactamase reduced virulence
LOHMMKBF_01021 PHI:2960 frdA 84.2 2.2e-269 1 526 1.0000 0.9583 bony fishes enteric septicemia fumarate reductase reduced virulence
LOHMMKBF_01022 PHI:2960 frdA 90.2 2.7e-18 1 51 0.7286 0.9583 bony fishes enteric septicemia fumarate reductase reduced virulence
LOHMMKBF_01039 PHI:2687 hfq 94.1 1.4e-47 1 102 1.0000 1.0000 rodents food poisoning regulators of systemic infection reduced virulence
LOHMMKBF_01047 PHI:2625 purA 97.4 1.1e-36 3 79 0.9747 0.7037 rodents food poisoning pathogenicity island reduced virulence
LOHMMKBF_01048 PHI:2625 purA 99.1 1.6e-131 4 229 0.9869 0.7037 rodents food poisoning pathogenicity island reduced virulence
LOHMMKBF_01049 PHI:12252 nsrR 77.3 5.1e-56 1 141 1.0000 0.9456 monocots Stewart's wilt; leaf blight (maize) DNA-binding transcriptional regulator unaffected pathogenicity
LOHMMKBF_01102 PHI:7020 cpdB 99.6 6.8e-275 1 463 1.0000 0.9768 birds colibacillosis 2′,3′-cyclic phosphodiesterase reduced virulence
LOHMMKBF_01103 PHI:7020 cpdB 100 2.6e-92 1 169 0.9037 0.9768 birds colibacillosis 2′,3′-cyclic phosphodiesterase reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
JKPJIPME_00039 AXG17361.1|GH8 100 1.11e-283 1 368 1 1
JKPJIPME_00041 VDZ06431.1|GT2 99.9 0 1 723 1 0.8291
JKPJIPME_00091 AZU44046.1|GH73 100 5.84e-184 1 274 1 1
JKPJIPME_00092 QAU62315.1|GH13_19 99.7 0 1 575 0.9897 0.8506
JKPJIPME_00111 AQW75267.1|GH127 100 0 1 659 1 1
JKPJIPME_00165 APJ96304.1|GT9 100 2.33e-259 1 348 1 1
JKPJIPME_00166 APJ85211.1|GT9 100 4.74e-170 1 233 0.9873 0.7304
JKPJIPME_00169 AUZ08250.1|GT2 100 2.65e-243 1 327 1 1
JKPJIPME_00170 QKF28478.1|GT8 100 1.36e-251 1 336 0.9492 0.9853
JKPJIPME_00172 AHM37072.1|GT8 99.3 2.14e-211 1 287 1 0.9631
JKPJIPME_00174 AIT36780.1|GT8 100 5.43e-253 1 338 1 1
JKPJIPME_00178 QIF16618.1|GT9 100 9.11e-259 1 352 1 1
JKPJIPME_00179 VDY97158.1|GT30 100 3.37e-307 1 425 1 1
JKPJIPME_00224 AVL31663.1|GH31 99.9 0 1 683 1 0.8847
JKPJIPME_00254 AQW75379.1|GH4 100 2.09e-153 1 212 1 1
JKPJIPME_00302 AWJ34949.1|GH1 100 7.17e-306 1 404 0.9806 0.8707
JKPJIPME_00382 QLK59446.1|GT0 76.4 4.18e-184 1 330 0.997 0.8777
JKPJIPME_00390 QDJ68759.1|GT56 100 6.5e-267 1 359 1 1
JKPJIPME_00392 ATM26343.1|GT26 100 1.46e-179 1 246 1 1
JKPJIPME_00492 BCG40301.1|GH31 100 0 1 678 1 1
JKPJIPME_00795 APL50980.1|GH4 100 0 1 451 1 1
JKPJIPME_00908 ADN71854.1|GH36 99.8 0 1 629 1 1
JKPJIPME_00926 AUF92300.1|GT2 99.4 0 1 486 1 0.871
LOHMMKBF_00039 AXG17361.1|GH8 100 1.11e-283 1 368 1 1
LOHMMKBF_00041 VDZ06431.1|GT2 99.9 0 1 723 1 0.8291
LOHMMKBF_00091 AZU44046.1|GH73 100 5.84e-184 1 274 1 1
LOHMMKBF_00092 QAU62315.1|GH13_19 99.7 0 1 575 0.9897 0.8506
LOHMMKBF_00111 AQW75267.1|GH127 100 0 1 659 1 1
LOHMMKBF_00165 APJ96304.1|GT9 100 2.33e-259 1 348 1 1
LOHMMKBF_00166 APJ85211.1|GT9 100 4.74e-170 1 233 0.9873 0.7304
LOHMMKBF_00169 AUZ08250.1|GT2 100 2.65e-243 1 327 1 1
LOHMMKBF_00170 QKF28478.1|GT8 100 1.36e-251 1 336 0.9492 0.9853
LOHMMKBF_00172 AHM37072.1|GT8 99.3 2.14e-211 1 287 1 0.9631
LOHMMKBF_00174 AIT36780.1|GT8 100 5.43e-253 1 338 1 1
LOHMMKBF_00178 QIF16618.1|GT9 100 9.11e-259 1 352 1 1
LOHMMKBF_00179 VDY97158.1|GT30 100 3.37e-307 1 425 1 1
LOHMMKBF_00224 AVL31663.1|GH31 99.9 0 1 683 1 0.8847
LOHMMKBF_00254 AQW75379.1|GH4 100 2.09e-153 1 212 1 1
LOHMMKBF_00302 AWJ34949.1|GH1 100 7.17e-306 1 404 0.9806 0.8707
LOHMMKBF_00382 QLK59446.1|GT0 76.4 4.18e-184 1 330 0.997 0.8777
LOHMMKBF_00390 QDJ68759.1|GT56 100 6.5e-267 1 359 1 1
LOHMMKBF_00392 ATM26343.1|GT26 100 1.46e-179 1 246 1 1
LOHMMKBF_00492 BCG40301.1|GH31 100 0 1 678 1 1
LOHMMKBF_00795 APL50980.1|GH4 100 0 1 451 1 1
LOHMMKBF_00908 ADN71854.1|GH36 99.8 0 1 629 1 1
LOHMMKBF_00926 AUF92300.1|GT2 99.4 0 1 486 1 0.871





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
JKPJIPME_00040 4.D.3.1.6 99.5 0 1 779 1.0000 0.8933 4 Group Translocators 4.D Polysaccharide Synthase/Exporters 4.D.3 The Glycan Glucosyl Transferase (OpgH) Family
JKPJIPME_00041 4.D.3.1.6 99.9 0 1 723 1.0000 0.8291 4 Group Translocators 4.D Polysaccharide Synthase/Exporters 4.D.3 The Glycan Glucosyl Transferase (OpgH) Family
JKPJIPME_00048 9.B.275.1.1 99 1.9e-239 1 406 0.9736 0.7263 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.275 The Phosphoethanolamine Transferase (PEAT) Family
JKPJIPME_00050 1.C.64.1.13 97.1 4.6e-14 1 35 1.0000 1.0000 1 Channels/Pores 1.C Pore-Forming Toxins (Proteins and Peptides) 1.C.64 The Fst Toxin (Fst) Family
JKPJIPME_00051 1.C.64.1.13 97.1 4.6e-14 1 35 1.0000 1.0000 1 Channels/Pores 1.C Pore-Forming Toxins (Proteins and Peptides) 1.C.64 The Fst Toxin (Fst) Family
JKPJIPME_00052 1.C.64.1.13 97.1 4.6e-14 1 35 1.0000 1.0000 1 Channels/Pores 1.C Pore-Forming Toxins (Proteins and Peptides) 1.C.64 The Fst Toxin (Fst) Family
JKPJIPME_00053 2.A.42.2.3 99.5 1.2e-228 1 424 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.42 The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family
JKPJIPME_00054 3.A.1.5.27 77 1e-142 3 327 0.9731 1.1051 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00055 3.A.1.5.27 74.5 6.1e-137 1 325 0.9939 1.0983 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00064 2.A.1.11.3 99.3 4.1e-215 1 402 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00070 1.B.6.13.1 100 9.9e-115 1 219 1.0000 1.0000 1 Channels/Pores 1.B β-Barrel Porins 1.B.6 The OmpA-OmpF Porin (OOP) Family
JKPJIPME_00075 1.E.53.1.2 94 3.5e-21 21 70 0.7143 1.0000 1 Channels/Pores 1.E Holins 1.E.53 The Toxic Hok/Gef Protein (Hok/Gef) Family
JKPJIPME_00081 9.B.97.1.1 99.6 3.8e-149 35 300 0.8867 0.8036 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.97 The Acyltransferase-3/Putative Acetyl-CoA Transporter (ATAT) Family
JKPJIPME_00082 9.B.44.1.1 100 4.1e-77 1 145 1.0000 1.2832 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.44 The YiaA-YiaB (YiaAB) Family
JKPJIPME_00083 9.B.44.1.1 98.2 1.4e-56 1 112 0.9912 0.9912 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.44 The YiaA-YiaB (YiaAB) Family
JKPJIPME_00088 3.A.1.2.4 99.6 7.3e-294 1 513 1.0000 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00089 3.A.1.2.4 100 1.2e-211 1 393 1.0000 0.7661 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00103 2.A.56.1.2 99.1 6.7e-184 1 328 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.56 The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family
JKPJIPME_00115 8.A.1.1.4 100 1.3e-207 1 378 1.0000 1.0000 8 Accessory Factors Involved in Transport 8.A Auxiliary transport proteins 8.A.1 The Membrane Fusion Protein (MFP) Family
JKPJIPME_00116 9.B.32.1.2 98.1 1.1e-55 1 107 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.32 The DUF3302 or Pfam11742 (YibI) Family
JKPJIPME_00135 9.B.32.1.1 99.2 1.1e-64 1 120 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.32 The DUF3302 or Pfam11742 (YibI) Family
JKPJIPME_00136 4.A.2.1.2 100 0 1 637 1.0000 1.0000 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
JKPJIPME_00144 2.A.14.1.1 99.8 1.5e-308 1 551 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.14 The Lactate Permease (LctP) Family
JKPJIPME_00212 1.A.62.2.3 100 8.4e-108 1 205 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.62 The Homotrimeric Cation Channel (TRIC) Family
JKPJIPME_00221 2.A.27.1.1 99.8 7.6e-214 1 401 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.27 The Glutamate:Na+ Symporter (ESS) Family
JKPJIPME_00222 2.A.40.4.2 100 8.1e-252 1 463 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.40 The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family
JKPJIPME_00223 9.B.121.3.1 99.3 0 1 569 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.121 The AsmA (AsmA) Family
JKPJIPME_00226 2.A.2.3.4 100 7.3e-236 1 411 1.0000 0.8935 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.2 The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family
JKPJIPME_00230 2.A.7.3.12 99.7 3.4e-161 1 307 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
JKPJIPME_00233 2.A.1.2.26 99.7 4e-210 17 412 0.9612 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00239 2.A.1.4.1 100 2.8e-260 1 463 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00240 2.A.1.4.4 99.3 5.2e-256 1 439 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00246 2.A.1.2.9 100 1e-218 1 394 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00249 9.B.51.1.1 100 9.9e-58 1 115 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.51 The Uncharacterized DUF202/YidH (YidH) Family
JKPJIPME_00252 2.A.21.3.21 99.6 0 1 571 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.21 The Solute:Sodium Symporter (SSS) Family
JKPJIPME_00258 2.A.81.1.5 99.8 4.7e-302 1 548 0.9768 0.9910 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.81 The Aspartate:Alanine Exchanger (AAEx) Family
JKPJIPME_00264 2.A.1.14.7 99.7 3.2e-200 1 349 1.0000 0.8116 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00282 2.A.9.3.1 99.7 6.2e-232 1 398 1.0000 0.7263 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.9 The Membrane Protein Insertase (YidC/Alb3/Oxa1) Family
JKPJIPME_00286 2.A.42.1.3 99.3 5.6e-236 1 415 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.42 The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family
JKPJIPME_00287 2.A.1.2.22 99 5.4e-156 1 299 1.0000 0.7647 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00292 2.A.40.7.6 99.8 5.3e-215 1 404 1.0000 0.9079 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.40 The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family
JKPJIPME_00300 1.B.3.1.3 99.2 7.9e-290 2 486 0.9979 0.9015 1 Channels/Pores 1.B β-Barrel Porins 1.B.3 The Sugar Porin (SP) Family
JKPJIPME_00307 3.A.1.7.1 100 7.2e-149 1 257 1.0000 0.8056 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00308 3.A.1.7.1 99.7 2e-158 1 296 1.0000 0.9279 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00309 3.A.1.7.1 100 1.2e-172 1 319 1.0000 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00310 3.A.1.7.1 100 3e-198 1 346 1.0000 1.0846 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00318 3.A.2.1.1 100 3.8e-72 1 139 1.0000 1.7595 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00319 3.A.2.1.1 100 3e-262 1 460 1.0000 5.8228 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00320 3.A.2.1.1 100 2.5e-158 1 287 1.0000 3.6329 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00321 3.A.2.1.1 99.7 4.2e-192 1 348 1.0000 4.4051 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00322 3.A.2.1.1 100 1.4e-84 1 157 0.9515 1.9873 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00323 3.A.2.1.1 100 2.3e-90 1 177 1.0000 2.2405 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00324 3.A.2.1.1 100 2.3e-73 1 156 1.0000 1.9747 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00325 3.A.2.1.1 100 4.8e-35 1 79 1.0000 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00326 3.A.2.1.1 100 3.1e-150 1 271 1.0000 3.4304 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
JKPJIPME_00327 1.A.77.3.11 97.6 3.8e-58 2 127 0.9921 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.77 The Mg2+/Ca2+ Uniporter (MCU) Family
JKPJIPME_00338 2.A.72.1.1 100 4.3e-305 1 536 1.0000 0.8617 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.72 The K+ Uptake Permease (KUP) Family
JKPJIPME_00341 3.A.1.2.1 99.2 3.1e-139 1 251 0.9580 0.7819 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00344 3.A.1.2.1 99.7 2.2e-157 1 296 1.0000 0.9221 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00347 2.A.1.3.51 99.6 3e-257 1 475 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00379 9.B.146.1.7 100 3.5e-205 1 367 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.146 The Putative Undecaprenyl-phosphate N-Acetylglucosaminyl Transferase (MurG) Family
JKPJIPME_00384 9.B.18.2.4 99.4 8.3e-212 1 355 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.18 The Xanthan Glycosyl Transferase, GumD (GumD) Family
JKPJIPME_00389 2.A.66.2.3 99.5 2.6e-225 1 416 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.66 The Multidrug/Oligosaccharidyl-lipid/Polysaccharide (MOP) Flippase Superfamily
JKPJIPME_00391 9.B.128.1.1 99.8 2.5e-253 1 450 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.128 The O-antigen Polymerase, WzyE (WzyE) Family
JKPJIPME_00393 2.A.3.1.15 100 8.1e-260 1 461 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.3 The Amino Acid-Polyamine-Organocation (APC) Family
JKPJIPME_00405 9.B.21.2.1 100 4e-61 1 106 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.21 The Frataxin (Frataxin) Family
JKPJIPME_00418 1.A.35.1.1 100 1.5e-177 1 316 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.35 The CorA Metal Ion Transporter (MIT) Family
JKPJIPME_00425 9.B.371.1.8 100 1.6e-82 1 155 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.371 The PaaI Thioesterase (PTE) Family
JKPJIPME_00428 2.A.76.1.2 100 4.3e-112 1 206 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.76 The Resistance to Homoserine/Threonine (RhtB) Family
JKPJIPME_00429 2.A.76.1.1 100 2.9e-108 1 206 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.76 The Resistance to Homoserine/Threonine (RhtB) Family
JKPJIPME_00432 2.A.7.3.61 100 2.3e-170 1 299 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
JKPJIPME_00443 2.A.64.1.1 98.9 7.2e-40 1 89 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.64 The Twin Arginine Targeting (Tat) Family
JKPJIPME_00444 2.A.64.1.1 100 3.2e-84 1 171 1.0000 1.9213 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.64 The Twin Arginine Targeting (Tat) Family
JKPJIPME_00445 2.A.64.1.1 100 9.8e-138 1 258 1.0000 2.8989 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.64 The Twin Arginine Targeting (Tat) Family
JKPJIPME_00456 2.A.38.1.1 100 5.5e-275 1 483 1.0000 1.0546 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.38 The K+ Transporter (Trk) Family
JKPJIPME_00491 2.A.2.3.9 99 9.8e-222 1 385 0.9698 0.8351 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.2 The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family
JKPJIPME_00501 9.B.126.2.1 100 1e-159 1 290 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.126 The Putative Lipid IV Exporter (YhjD) Family
JKPJIPME_00521 4.A.2.1.25 99.8 1.6e-266 1 483 1.0000 3.2635 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
JKPJIPME_00522 4.A.2.1.25 98.6 1.4e-80 1 148 1.0000 1.0000 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
JKPJIPME_00531 2.A.7.6.1 97.7 6e-191 1 344 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
JKPJIPME_00534 2.A.10.1.2 99.6 2.2e-129 1 257 1.0000 0.7859 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.10 The 2-Keto-3-Deoxygluconate Transporter (KdgT) Family
JKPJIPME_00550 9.B.124.2.2 98.6 5.6e-82 1 146 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.124 The DUF805 or PF05656 (DUF805) Family
JKPJIPME_00557 1.A.8.1.1 100 6.9e-161 1 281 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.8 The Major Intrinsic Protein (MIP) Family
JKPJIPME_00588 4.A.2.1.10 99.6 0 1 833 1.0000 7.8585 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
JKPJIPME_00589 4.A.2.1.10 100 3.5e-194 1 359 1.0000 3.3868 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
JKPJIPME_00590 4.A.2.1.10 100 4.9e-51 1 106 1.0000 1.0000 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
JKPJIPME_00594 4.A.2.1.10 99.1 9.8e-58 1 113 1.0000 1.0660 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
JKPJIPME_00675 2.A.58.2.1 100 1.6e-261 3 495 0.9960 0.9079 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.58 The Phosphate:Na+ Symporter (PNaS) Family
JKPJIPME_00689 1.B.14.16.4 100 0 1 698 1.0000 1.0000 1 Channels/Pores 1.B β-Barrel Porins 1.B.14 The Outer Membrane Receptor (OMR) Family
JKPJIPME_00691 2.A.1.1.3 99.4 9.3e-276 1 484 0.9132 0.9857 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00692 3.A.1.1.1 100 1.7e-162 1 296 1.0000 0.7978 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00693 3.A.1.1.1 99.5 1.6e-252 1 440 1.0000 1.1860 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00694 3.A.1.1.1 100 5.2e-231 1 396 1.0000 1.0674 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00696 3.A.1.1.1 100 8.5e-173 1 305 1.0000 0.8221 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00698 1.B.3.1.1 97.8 4e-225 1 372 1.0000 0.8341 1 Channels/Pores 1.B β-Barrel Porins 1.B.3 The Sugar Porin (SP) Family
JKPJIPME_00738 2.A.40.7.5 100 3.5e-189 1 359 0.9836 0.7996 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.40 The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family
JKPJIPME_00744 2.A.21.7.2 99.8 1e-301 1 549 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.21 The Solute:Sodium Symporter (SSS) Family
JKPJIPME_00745 9.B.136.1.1 100 2.1e-54 1 104 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.136 The 2 TMS Membrane Protein, YjcH (YjcH) Family
JKPJIPME_00747 5.A.3.5.3 100 9.2e-291 1 478 1.0000 1.5031 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family
JKPJIPME_00749 5.A.3.5.3 100 3.3e-134 1 223 1.0000 0.7013 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family
JKPJIPME_00750 5.A.3.5.3 100 3.6e-174 1 318 1.0000 1.0000 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family
JKPJIPME_00754 2.A.23.1.1 99.5 7.5e-231 1 437 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.23 The Dicarboxylate/Amino Acid:Cation (Na+ or H+) Symporter (DAACS) Family
JKPJIPME_00756 3.D.1.9.2 100 0 1 559 1.0000 2.1922 3 Primary Active Transporters 3.D Oxidoreduction-driven transporters 3.D.1 The H+ or Na+-translocating NADH Dehydrogenase (NDH) Family
JKPJIPME_00758 1.B.17.3.9 97.4 7.9e-208 1 390 1.0000 0.7992 1 Channels/Pores 1.B β-Barrel Porins 1.B.17 The Outer Membrane Factor (OMF) Family
JKPJIPME_00760 2.A.85.6.1 99.3 0 1 683 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.85 The Aromatic Acid Exporter (ArAE) Family
JKPJIPME_00761 8.A.1.1.3 99.4 2.7e-183 1 343 1.0000 1.0000 8 Accessory Factors Involved in Transport 8.A Auxiliary transport proteins 8.A.1 The Membrane Fusion Protein (MFP) Family
JKPJIPME_00777 3.A.1.9.1 99.6 2.5e-141 1 258 1.0000 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00778 3.A.1.9.1 99.6 1.2e-154 1 274 1.0000 1.0579 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00780 3.A.1.9.1 98.9 1.4e-144 1 262 1.0000 1.0116 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
JKPJIPME_00785 2.A.1.6.4 99.4 7.6e-280 1 500 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00790 2.A.3.2.5 100 6.2e-249 1 445 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.3 The Amino Acid-Polyamine-Organocation (APC) Family
JKPJIPME_00796 2.A.2.1.1 100 1.3e-196 1 353 1.0000 0.7463 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.2 The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family
JKPJIPME_00810 1.C.130.1.2 100 2.9e-24 1 57 0.9344 1.0000 1 Channels/Pores 1.C Pore-Forming Toxins (Proteins and Peptides) 1.C.130 The Membrane Potential-dissipating Orphan 10 Toxin, (OrtT) Family
JKPJIPME_00812 2.A.17.1.5 100 1e-273 1 485 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.17 The Proton-dependent Oligopeptide Transporter (POT/PTR) Family
JKPJIPME_00814 2.A.3.2.2 100 1.4e-248 1 444 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.3 The Amino Acid-Polyamine-Organocation (APC) Family
JKPJIPME_00852 2.A.1.7.5 95.7 2.3e-232 1 438 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
JKPJIPME_00922 2.A.6.8.2 98.1 0 22 757 0.9723 0.9826 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily
JKPJIPME_00991 1.B.6.2.13 87 1.5e-104 1 208 1.0000 0.8430 1 Channels/Pores 1.B β-Barrel Porins 1.B.6 The OmpA-OmpF Porin (OOP) Family
JKPJIPME_01001 2.A.13.1.1 100 3.1e-229 1 433 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.13 The C<sub>4</sub>-Dicarboxylate Uptake (Dcu) Family
JKPJIPME_01014 9.B.13.1.1 100 1.9e-18 1 48 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.13 The Putative Pore-forming Entericidin (ECN) Family
JKPJIPME_01015 2.A.7.1.4 100 9.1e-50 1 105 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
JKPJIPME_01017 8.A.212.1.4 73.5 4.1e-156 39 381 0.8979 0.9026 8 Accessory Factors Involved in Transport 8.A Auxiliary transport proteins 8.A.212 The d-Amino Acid Peptidase (dAAP) Family
JKPJIPME_01024 2.A.3.7.5 98.4 2.5e-278 1 500 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.3 The Amino Acid-Polyamine-Organocation (APC) Family
JKPJIPME_01025 1.A.23.1.3 99.7 0 1 1107 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.23 The Small Conductance Mechanosensitive Ion Channel (MscS) Family
JKPJIPME_01039 9.B.468.1.1 100 5.2e-50 1 102 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.468 The Hfq RNA Chaparone Protein (Hfq) Family
JKPJIPME_01056 9.B.358.1.4 99.2 2.1e-67 1 132 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.358 The DUF350 domain-containing (DUF350) Family
JKPJIPME_01068 4.A.7.1.1 99.6 2.6e-258 1 465 1.0000 4.6040 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.7 The PTS L-Ascorbate (L-Asc) Family
JKPJIPME_01069 4.A.7.1.1 100 1.1e-52 1 101 1.0000 1.0000 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.7 The PTS L-Ascorbate (L-Asc) Family
JKPJIPME_01070 4.A.7.1.1 83.1 8.2e-30 1 77 0.9390 0.7624 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.7 The PTS L-Ascorbate (L-Asc) Family
JKPJIPME_01071 4.A.7.1.1 100 1.8e-46 1 89 1.0000 0.8812 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.7 The PTS L-Ascorbate (L-Asc) Family
JKPJIPME_01098 2.A.7.3.19 98.8 2.6e-180 1 321 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
JKPJIPME_01107 1.A.112.2.11 99.4 1.6e-183 1 326 0.9395 0.7293 1 Channels/Pores 1.A α-Type Channels 1.A.112 The Cyclin M Mg2+ Exporter (CNNM) Family
JKPJIPME_01110 1.B.33.2.4 100 0 1 539 0.8807 0.9341 1 Channels/Pores 1.B β-Barrel Porins 1.B.33 The Outer Membrane Protein Insertion Porin (Bam Complex) (OmpIP) Family
JKPJIPME_01112 9.B.121.6.2 99.3 0 1 965 1.0000 0.7665 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.121 The AsmA (AsmA) Family
LOHMMKBF_00040 4.D.3.1.6 99.5 0 1 779 1.0000 0.8933 4 Group Translocators 4.D Polysaccharide Synthase/Exporters 4.D.3 The Glycan Glucosyl Transferase (OpgH) Family
LOHMMKBF_00041 4.D.3.1.6 99.9 0 1 723 1.0000 0.8291 4 Group Translocators 4.D Polysaccharide Synthase/Exporters 4.D.3 The Glycan Glucosyl Transferase (OpgH) Family
LOHMMKBF_00048 9.B.275.1.1 99 1.9e-239 1 406 0.9736 0.7263 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.275 The Phosphoethanolamine Transferase (PEAT) Family
LOHMMKBF_00050 1.C.64.1.13 97.1 4.6e-14 1 35 1.0000 1.0000 1 Channels/Pores 1.C Pore-Forming Toxins (Proteins and Peptides) 1.C.64 The Fst Toxin (Fst) Family
LOHMMKBF_00051 1.C.64.1.13 97.1 4.6e-14 1 35 1.0000 1.0000 1 Channels/Pores 1.C Pore-Forming Toxins (Proteins and Peptides) 1.C.64 The Fst Toxin (Fst) Family
LOHMMKBF_00052 1.C.64.1.13 97.1 4.6e-14 1 35 1.0000 1.0000 1 Channels/Pores 1.C Pore-Forming Toxins (Proteins and Peptides) 1.C.64 The Fst Toxin (Fst) Family
LOHMMKBF_00053 2.A.42.2.3 99.5 1.2e-228 1 424 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.42 The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family
LOHMMKBF_00054 3.A.1.5.27 77 1e-142 3 327 0.9731 1.1051 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00055 3.A.1.5.27 74.5 6.1e-137 1 325 0.9939 1.0983 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00064 2.A.1.11.3 99.3 4.1e-215 1 402 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00070 1.B.6.13.1 100 9.9e-115 1 219 1.0000 1.0000 1 Channels/Pores 1.B β-Barrel Porins 1.B.6 The OmpA-OmpF Porin (OOP) Family
LOHMMKBF_00075 1.E.53.1.2 94 3.5e-21 21 70 0.7143 1.0000 1 Channels/Pores 1.E Holins 1.E.53 The Toxic Hok/Gef Protein (Hok/Gef) Family
LOHMMKBF_00081 9.B.97.1.1 99.6 3.8e-149 35 300 0.8867 0.8036 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.97 The Acyltransferase-3/Putative Acetyl-CoA Transporter (ATAT) Family
LOHMMKBF_00082 9.B.44.1.1 100 4.1e-77 1 145 1.0000 1.2832 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.44 The YiaA-YiaB (YiaAB) Family
LOHMMKBF_00083 9.B.44.1.1 98.2 1.4e-56 1 112 0.9912 0.9912 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.44 The YiaA-YiaB (YiaAB) Family
LOHMMKBF_00088 3.A.1.2.4 99.6 7.3e-294 1 513 1.0000 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00089 3.A.1.2.4 100 1.2e-211 1 393 1.0000 0.7661 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00103 2.A.56.1.2 99.1 6.7e-184 1 328 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.56 The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family
LOHMMKBF_00115 8.A.1.1.4 100 1.3e-207 1 378 1.0000 1.0000 8 Accessory Factors Involved in Transport 8.A Auxiliary transport proteins 8.A.1 The Membrane Fusion Protein (MFP) Family
LOHMMKBF_00116 9.B.32.1.2 98.1 1.1e-55 1 107 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.32 The DUF3302 or Pfam11742 (YibI) Family
LOHMMKBF_00135 9.B.32.1.1 99.2 1.1e-64 1 120 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.32 The DUF3302 or Pfam11742 (YibI) Family
LOHMMKBF_00136 4.A.2.1.2 100 0 1 637 1.0000 1.0000 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
LOHMMKBF_00144 2.A.14.1.1 99.8 1.5e-308 1 551 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.14 The Lactate Permease (LctP) Family
LOHMMKBF_00212 1.A.62.2.3 100 8.4e-108 1 205 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.62 The Homotrimeric Cation Channel (TRIC) Family
LOHMMKBF_00221 2.A.27.1.1 99.8 7.6e-214 1 401 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.27 The Glutamate:Na+ Symporter (ESS) Family
LOHMMKBF_00222 2.A.40.4.2 100 8.1e-252 1 463 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.40 The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family
LOHMMKBF_00223 9.B.121.3.1 99.3 0 1 569 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.121 The AsmA (AsmA) Family
LOHMMKBF_00226 2.A.2.3.4 100 7.3e-236 1 411 1.0000 0.8935 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.2 The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family
LOHMMKBF_00230 2.A.7.3.12 99.7 3.4e-161 1 307 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
LOHMMKBF_00233 2.A.1.2.26 99.7 4e-210 17 412 0.9612 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00239 2.A.1.4.1 100 2.8e-260 1 463 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00240 2.A.1.4.4 99.3 5.2e-256 1 439 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00246 2.A.1.2.9 100 1e-218 1 394 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00249 9.B.51.1.1 100 9.9e-58 1 115 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.51 The Uncharacterized DUF202/YidH (YidH) Family
LOHMMKBF_00252 2.A.21.3.21 99.6 0 1 571 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.21 The Solute:Sodium Symporter (SSS) Family
LOHMMKBF_00258 2.A.81.1.5 99.8 4.7e-302 1 548 0.9768 0.9910 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.81 The Aspartate:Alanine Exchanger (AAEx) Family
LOHMMKBF_00264 2.A.1.14.7 99.7 3.2e-200 1 349 1.0000 0.8116 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00282 2.A.9.3.1 99.7 6.2e-232 1 398 1.0000 0.7263 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.9 The Membrane Protein Insertase (YidC/Alb3/Oxa1) Family
LOHMMKBF_00286 2.A.42.1.3 99.3 5.6e-236 1 415 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.42 The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family
LOHMMKBF_00287 2.A.1.2.22 99 5.4e-156 1 299 1.0000 0.7647 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00292 2.A.40.7.6 99.8 5.3e-215 1 404 1.0000 0.9079 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.40 The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family
LOHMMKBF_00300 1.B.3.1.3 99.2 7.9e-290 2 486 0.9979 0.9015 1 Channels/Pores 1.B β-Barrel Porins 1.B.3 The Sugar Porin (SP) Family
LOHMMKBF_00307 3.A.1.7.1 100 7.2e-149 1 257 1.0000 0.8056 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00308 3.A.1.7.1 99.7 2e-158 1 296 1.0000 0.9279 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00309 3.A.1.7.1 100 1.2e-172 1 319 1.0000 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00310 3.A.1.7.1 100 3e-198 1 346 1.0000 1.0846 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00318 3.A.2.1.1 100 3.8e-72 1 139 1.0000 1.7595 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00319 3.A.2.1.1 100 3e-262 1 460 1.0000 5.8228 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00320 3.A.2.1.1 100 2.5e-158 1 287 1.0000 3.6329 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00321 3.A.2.1.1 99.7 4.2e-192 1 348 1.0000 4.4051 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00322 3.A.2.1.1 100 1.4e-84 1 157 0.9515 1.9873 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00323 3.A.2.1.1 100 2.3e-90 1 177 1.0000 2.2405 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00324 3.A.2.1.1 100 2.3e-73 1 156 1.0000 1.9747 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00325 3.A.2.1.1 100 4.8e-35 1 79 1.0000 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00326 3.A.2.1.1 100 3.1e-150 1 271 1.0000 3.4304 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.2 The H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily
LOHMMKBF_00327 1.A.77.3.11 97.6 3.8e-58 2 127 0.9921 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.77 The Mg2+/Ca2+ Uniporter (MCU) Family
LOHMMKBF_00338 2.A.72.1.1 100 4.3e-305 1 536 1.0000 0.8617 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.72 The K+ Uptake Permease (KUP) Family
LOHMMKBF_00341 3.A.1.2.1 99.2 3.1e-139 1 251 0.9580 0.7819 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00344 3.A.1.2.1 99.7 2.2e-157 1 296 1.0000 0.9221 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00347 2.A.1.3.51 99.6 3e-257 1 475 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00379 9.B.146.1.7 100 3.5e-205 1 367 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.146 The Putative Undecaprenyl-phosphate N-Acetylglucosaminyl Transferase (MurG) Family
LOHMMKBF_00384 9.B.18.2.4 99.4 8.3e-212 1 355 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.18 The Xanthan Glycosyl Transferase, GumD (GumD) Family
LOHMMKBF_00389 2.A.66.2.3 99.5 2.6e-225 1 416 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.66 The Multidrug/Oligosaccharidyl-lipid/Polysaccharide (MOP) Flippase Superfamily
LOHMMKBF_00391 9.B.128.1.1 99.8 2.5e-253 1 450 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.128 The O-antigen Polymerase, WzyE (WzyE) Family
LOHMMKBF_00393 2.A.3.1.15 100 8.1e-260 1 461 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.3 The Amino Acid-Polyamine-Organocation (APC) Family
LOHMMKBF_00405 9.B.21.2.1 100 4e-61 1 106 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.21 The Frataxin (Frataxin) Family
LOHMMKBF_00418 1.A.35.1.1 100 1.5e-177 1 316 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.35 The CorA Metal Ion Transporter (MIT) Family
LOHMMKBF_00425 9.B.371.1.8 100 1.6e-82 1 155 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.371 The PaaI Thioesterase (PTE) Family
LOHMMKBF_00428 2.A.76.1.2 100 4.3e-112 1 206 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.76 The Resistance to Homoserine/Threonine (RhtB) Family
LOHMMKBF_00429 2.A.76.1.1 100 2.9e-108 1 206 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.76 The Resistance to Homoserine/Threonine (RhtB) Family
LOHMMKBF_00432 2.A.7.3.61 100 2.3e-170 1 299 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
LOHMMKBF_00443 2.A.64.1.1 98.9 7.2e-40 1 89 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.64 The Twin Arginine Targeting (Tat) Family
LOHMMKBF_00444 2.A.64.1.1 100 3.2e-84 1 171 1.0000 1.9213 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.64 The Twin Arginine Targeting (Tat) Family
LOHMMKBF_00445 2.A.64.1.1 100 9.8e-138 1 258 1.0000 2.8989 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.64 The Twin Arginine Targeting (Tat) Family
LOHMMKBF_00456 2.A.38.1.1 100 5.5e-275 1 483 1.0000 1.0546 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.38 The K+ Transporter (Trk) Family
LOHMMKBF_00491 2.A.2.3.9 99 9.8e-222 1 385 0.9698 0.8351 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.2 The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family
LOHMMKBF_00501 9.B.126.2.1 100 1e-159 1 290 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.126 The Putative Lipid IV Exporter (YhjD) Family
LOHMMKBF_00521 4.A.2.1.25 99.8 1.6e-266 1 483 1.0000 3.2635 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
LOHMMKBF_00522 4.A.2.1.25 98.6 1.4e-80 1 148 1.0000 1.0000 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
LOHMMKBF_00531 2.A.7.6.1 97.7 6e-191 1 344 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
LOHMMKBF_00534 2.A.10.1.2 99.6 2.2e-129 1 257 1.0000 0.7859 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.10 The 2-Keto-3-Deoxygluconate Transporter (KdgT) Family
LOHMMKBF_00550 9.B.124.2.2 98.6 5.6e-82 1 146 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.124 The DUF805 or PF05656 (DUF805) Family
LOHMMKBF_00557 1.A.8.1.1 100 6.9e-161 1 281 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.8 The Major Intrinsic Protein (MIP) Family
LOHMMKBF_00588 4.A.2.1.10 99.6 0 1 833 1.0000 7.8585 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
LOHMMKBF_00589 4.A.2.1.10 100 3.5e-194 1 359 1.0000 3.3868 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
LOHMMKBF_00590 4.A.2.1.10 100 4.9e-51 1 106 1.0000 1.0000 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
LOHMMKBF_00594 4.A.2.1.10 99.1 9.8e-58 1 113 1.0000 1.0660 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.2 The PTS Fructose-Mannitol (Fru) Family
LOHMMKBF_00675 2.A.58.2.1 100 1.6e-261 3 495 0.9960 0.9079 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.58 The Phosphate:Na+ Symporter (PNaS) Family
LOHMMKBF_00689 1.B.14.16.4 100 0 1 698 1.0000 1.0000 1 Channels/Pores 1.B β-Barrel Porins 1.B.14 The Outer Membrane Receptor (OMR) Family
LOHMMKBF_00691 2.A.1.1.3 99.4 9.3e-276 1 484 0.9132 0.9857 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00692 3.A.1.1.1 100 1.7e-162 1 296 1.0000 0.7978 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00693 3.A.1.1.1 99.5 1.6e-252 1 440 1.0000 1.1860 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00694 3.A.1.1.1 100 5.2e-231 1 396 1.0000 1.0674 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00696 3.A.1.1.1 100 8.5e-173 1 305 1.0000 0.8221 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00698 1.B.3.1.1 97.8 4e-225 1 372 1.0000 0.8341 1 Channels/Pores 1.B β-Barrel Porins 1.B.3 The Sugar Porin (SP) Family
LOHMMKBF_00738 2.A.40.7.5 100 3.5e-189 1 359 0.9836 0.7996 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.40 The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family
LOHMMKBF_00744 2.A.21.7.2 99.8 1e-301 1 549 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.21 The Solute:Sodium Symporter (SSS) Family
LOHMMKBF_00745 9.B.136.1.1 100 2.1e-54 1 104 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.136 The 2 TMS Membrane Protein, YjcH (YjcH) Family
LOHMMKBF_00747 5.A.3.5.3 100 9.2e-291 1 478 1.0000 1.5031 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family
LOHMMKBF_00749 5.A.3.5.3 100 3.3e-134 1 223 1.0000 0.7013 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family
LOHMMKBF_00750 5.A.3.5.3 100 3.6e-174 1 318 1.0000 1.0000 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family
LOHMMKBF_00754 2.A.23.1.1 99.5 7.5e-231 1 437 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.23 The Dicarboxylate/Amino Acid:Cation (Na+ or H+) Symporter (DAACS) Family
LOHMMKBF_00756 3.D.1.9.2 100 0 1 559 1.0000 2.1922 3 Primary Active Transporters 3.D Oxidoreduction-driven transporters 3.D.1 The H+ or Na+-translocating NADH Dehydrogenase (NDH) Family
LOHMMKBF_00758 1.B.17.3.9 97.4 7.9e-208 1 390 1.0000 0.7992 1 Channels/Pores 1.B β-Barrel Porins 1.B.17 The Outer Membrane Factor (OMF) Family
LOHMMKBF_00760 2.A.85.6.1 99.3 0 1 683 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.85 The Aromatic Acid Exporter (ArAE) Family
LOHMMKBF_00761 8.A.1.1.3 99.4 2.7e-183 1 343 1.0000 1.0000 8 Accessory Factors Involved in Transport 8.A Auxiliary transport proteins 8.A.1 The Membrane Fusion Protein (MFP) Family
LOHMMKBF_00777 3.A.1.9.1 99.6 2.5e-141 1 258 1.0000 1.0000 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00778 3.A.1.9.1 99.6 1.2e-154 1 274 1.0000 1.0579 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00780 3.A.1.9.1 98.9 1.4e-144 1 262 1.0000 1.0116 3 Primary Active Transporters 3.A P-P-bond-hydrolysis-driven transporters 3.A.1 The ATP-binding Cassette (ABC) Superfamily
LOHMMKBF_00785 2.A.1.6.4 99.4 7.6e-280 1 500 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00790 2.A.3.2.5 100 6.2e-249 1 445 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.3 The Amino Acid-Polyamine-Organocation (APC) Family
LOHMMKBF_00796 2.A.2.1.1 100 1.3e-196 1 353 1.0000 0.7463 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.2 The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family
LOHMMKBF_00810 1.C.130.1.2 100 2.9e-24 1 57 0.9344 1.0000 1 Channels/Pores 1.C Pore-Forming Toxins (Proteins and Peptides) 1.C.130 The Membrane Potential-dissipating Orphan 10 Toxin, (OrtT) Family
LOHMMKBF_00812 2.A.17.1.5 100 1e-273 1 485 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.17 The Proton-dependent Oligopeptide Transporter (POT/PTR) Family
LOHMMKBF_00814 2.A.3.2.2 100 1.4e-248 1 444 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.3 The Amino Acid-Polyamine-Organocation (APC) Family
LOHMMKBF_00852 2.A.1.7.5 95.7 2.3e-232 1 438 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
LOHMMKBF_00922 2.A.6.8.2 98.1 0 22 757 0.9723 0.9826 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily
LOHMMKBF_00991 1.B.6.2.13 87 1.5e-104 1 208 1.0000 0.8430 1 Channels/Pores 1.B β-Barrel Porins 1.B.6 The OmpA-OmpF Porin (OOP) Family
LOHMMKBF_01001 2.A.13.1.1 100 3.1e-229 1 433 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.13 The C<sub>4</sub>-Dicarboxylate Uptake (Dcu) Family
LOHMMKBF_01014 9.B.13.1.1 100 1.9e-18 1 48 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.13 The Putative Pore-forming Entericidin (ECN) Family
LOHMMKBF_01015 2.A.7.1.4 100 9.1e-50 1 105 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
LOHMMKBF_01017 8.A.212.1.4 73.5 4.1e-156 39 381 0.8979 0.9026 8 Accessory Factors Involved in Transport 8.A Auxiliary transport proteins 8.A.212 The d-Amino Acid Peptidase (dAAP) Family
LOHMMKBF_01024 2.A.3.7.5 98.4 2.5e-278 1 500 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.3 The Amino Acid-Polyamine-Organocation (APC) Family
LOHMMKBF_01025 1.A.23.1.3 99.7 0 1 1107 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.23 The Small Conductance Mechanosensitive Ion Channel (MscS) Family
LOHMMKBF_01039 9.B.468.1.1 100 5.2e-50 1 102 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.468 The Hfq RNA Chaparone Protein (Hfq) Family
LOHMMKBF_01056 9.B.358.1.4 99.2 2.1e-67 1 132 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.358 The DUF350 domain-containing (DUF350) Family
LOHMMKBF_01068 4.A.7.1.1 99.6 2.6e-258 1 465 1.0000 4.6040 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.7 The PTS L-Ascorbate (L-Asc) Family
LOHMMKBF_01069 4.A.7.1.1 100 1.1e-52 1 101 1.0000 1.0000 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.7 The PTS L-Ascorbate (L-Asc) Family
LOHMMKBF_01070 4.A.7.1.1 83.1 8.2e-30 1 77 0.9390 0.7624 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.7 The PTS L-Ascorbate (L-Asc) Family
LOHMMKBF_01071 4.A.7.1.1 100 1.8e-46 1 89 1.0000 0.8812 4 Group Translocators 4.A Phosphotransfer-driven Group Translocators (PTS) 4.A.7 The PTS L-Ascorbate (L-Asc) Family
LOHMMKBF_01098 2.A.7.3.19 98.8 2.6e-180 1 321 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.7 The Drug/Metabolite Transporter (DMT) Superfamily
LOHMMKBF_01107 1.A.112.2.11 99.4 1.6e-183 1 326 0.9395 0.7293 1 Channels/Pores 1.A α-Type Channels 1.A.112 The Cyclin M Mg2+ Exporter (CNNM) Family
LOHMMKBF_01110 1.B.33.2.4 100 0 1 539 0.8807 0.9341 1 Channels/Pores 1.B β-Barrel Porins 1.B.33 The Outer Membrane Protein Insertion Porin (Bam Complex) (OmpIP) Family
LOHMMKBF_01112 9.B.121.6.2 99.3 0 1 965 1.0000 0.7665 9 Incompletely Characterized Transport Systems 9.B Putative transport proteins 9.B.121 The AsmA (AsmA) Family