Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C159
  Reference Plasmid   CP090925.1
  Reference Plasmid Size   63763
  Reference Plasmid GC Content   0.29
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0059431 ONKJLKNJ_00012 12534 3 Skin 0.05 protein_coding synonymous_variant LOW 456T>C Ile152Ile
M0059432 ONKJLKNJ_00012 12559 3 Skin 0.05 protein_coding missense_variant MODERATE 481A>G Ile161Val
M0059433 ONKJLKNJ_00012 12653 3 Skin 0.05 protein_coding missense_variant MODERATE 575A>G Gln192Arg
M0059434 ONKJLKNJ_00012 12654 3 Skin 0.05 protein_coding missense_variant MODERATE 576A>T Gln192His
M0059435 ONKJLKNJ_00010 13212 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3451C>T None
M0059436 ONKJLKNJ_00013 13392 3 Skin 0.05 protein_coding synonymous_variant LOW 39A>G Ala13Ala
M0059437 ONKJLKNJ_00040 37939 6 Skin 0.10 protein_coding synonymous_variant LOW 162T>C Tyr54Tyr
M0059438 ONKJLKNJ_00040 38032 4 Skin 0.07 protein_coding synonymous_variant LOW 69T>C Ser23Ser
M0059439 ONKJLKNJ_00040 38044 6 Skin 0.10 protein_coding synonymous_variant LOW 57A>G Lys19Lys
M0059440 ONKJLKNJ_00041 38103 9 Skin 0.15 protein_coding missense_variant MODERATE 956C>T Thr319Ile
M0059441 ONKJLKNJ_00041 38302 10 Skin 0.16 protein_coding missense_variant MODERATE 757A>G Ser253Gly
M0059442 ONKJLKNJ_00041 38348 10 Skin 0.16 protein_coding synonymous_variant LOW 711T>C Ala237Ala
M0059443 ONKJLKNJ_00041 38365 12 Skin 0.20 protein_coding missense_variant MODERATE 694C>T Leu232Phe
M0059444 ONKJLKNJ_00041 38374 11 Skin 0.18 protein_coding synonymous_variant LOW 685C>T Leu229Leu
M0059445 ONKJLKNJ_00041 38419 8 Skin 0.13 protein_coding missense_variant MODERATE 640C>A Gln214Lys
M0059446 ONKJLKNJ_00041 38598 11 Skin 0.18 protein_coding missense_variant MODERATE 461C>T Ser154Leu
M0059447 ONKJLKNJ_00041 38600 11 Skin 0.18 protein_coding synonymous_variant LOW 459C>T Ser153Ser
M0059448 ONKJLKNJ_00041 38605 11 Skin 0.18 protein_coding missense_variant MODERATE 454A>G Arg152Gly
M0059449 ONKJLKNJ_00041 38606 3 Skin 0.05 protein_coding synonymous_variant LOW 453C>T Ser151Ser
M0059450 ONKJLKNJ_00041 38619 11 Skin 0.18 protein_coding missense_variant MODERATE 440T>C Ile147Thr
M0059451 ONKJLKNJ_00041 38886 12 Skin 0.20 protein_coding missense_variant MODERATE 173A>G Asn58Ser
M0059452 ONKJLKNJ_00036 39067 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4325A>G None
M0059453 ONKJLKNJ_00036 39182 14 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -4440A>G None
M0059454 ONKJLKNJ_00036 39184 14 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -4442C>T None
M0059455 ONKJLKNJ_00036 39289 12 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -4547G>T None
M0059456 ONKJLKNJ_00036 39431 15 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4689A>C None
M0059457 ONKJLKNJ_00036 39441 10 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4699A>C None
M0059458 ONKJLKNJ_00036 39460 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4718T>C None
M0059459 ONKJLKNJ_00036 39464 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4722A>G None
M0059460 ONKJLKNJ_00036 39481 12 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -4739T>G None
M0059461 ONKJLKNJ_00036 39514 13 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4772C>T None
M0059462 ONKJLKNJ_00036 39573 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4831T>C None
M0059463 ONKJLKNJ_00042 39793 8 Skin 0.13 protein_coding missense_variant MODERATE 200A>G Glu67Gly
M0059464 ONKJLKNJ_00042 39881 11 Skin 0.18 protein_coding synonymous_variant LOW 288T>C Asn96Asn
M0059465 ONKJLKNJ_00042 39977 11 Skin 0.18 protein_coding synonymous_variant LOW 384T>C Asp128Asp
M0059466 ONKJLKNJ_00042 40031 7 Skin 0.11 protein_coding synonymous_variant LOW 438A>C Pro146Pro
M0059467 ONKJLKNJ_00042 40097 10 Skin 0.16 protein_coding synonymous_variant LOW 504C>T Val168Val
M0059468 ONKJLKNJ_00043 40429 8 Skin 0.13 protein_coding synonymous_variant LOW 30T>C His10His
M0059469 ONKJLKNJ_00043 40462 8 Skin 0.13 protein_coding synonymous_variant LOW 63T>C Asn21Asn
M0059470 ONKJLKNJ_00043 40582 11 Skin 0.18 protein_coding synonymous_variant LOW 183C>T Ser61Ser
M0059471 ONKJLKNJ_00040 40717 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2617G>A None
M0059472 ONKJLKNJ_00040 40726 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2626A>G None
M0059473 ONKJLKNJ_00040 40731 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2631A>T None
M0059474 ONKJLKNJ_00040 40734 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2634C>T None
M0059475 ONKJLKNJ_00040 40737 11 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -2637G>A None
M0059476 ONKJLKNJ_00040 40748 12 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -2648C>T None
M0059477 ONKJLKNJ_00040 40753 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2653A>G None
M0059478 ONKJLKNJ_00040 40766 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2666T>C None
M0059479 ONKJLKNJ_00040 40789 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2689T>C None
M0059480 ONKJLKNJ_00040 40825 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2725T>C None
M0059481 ONKJLKNJ_00040 40829 11 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -2729C>T None
M0059482 ONKJLKNJ_00044 40876 8 Skin 0.13 protein_coding missense_variant MODERATE 34G>A Val12Ile
M0059483 ONKJLKNJ_00044 40883 8 Skin 0.13 protein_coding missense_variant MODERATE 41A>T Tyr14Phe
M0059484 ONKJLKNJ_00044 40919 8 Skin 0.13 protein_coding missense_variant MODERATE 77C>T Thr26Ile
M0059485 ONKJLKNJ_00044 40921 8 Skin 0.13 protein_coding stop_gained HIGH 79C>T Gln27*
M0059486 ONKJLKNJ_00041 38514 6 Skin 0.10 protein_coding missense_variant MODERATE 545A>G Asn182Ser
M0059487 ONKJLKNJ_00041 38582 6 Skin 0.10 protein_coding synonymous_variant LOW 477A>G Pro159Pro
M0059488 ONKJLKNJ_00041 38654 3 Skin 0.05 protein_coding missense_variant MODERATE 405C>A Asp135Glu
M0059489 ONKJLKNJ_00041 38656 3 Skin 0.05 protein_coding missense_variant MODERATE 403G>A Asp135Asn
M0059490 ONKJLKNJ_00036 39088 8 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4346C>A None
M0059491 ONKJLKNJ_00036 39459 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4717G>A None
M0059492 ONKJLKNJ_00036 39461 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4719A>T None
M0059493 ONKJLKNJ_00036 39463 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4721T>C None
M0059494 ONKJLKNJ_00040 41415 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3315T>C None
M0059495 ONKJLKNJ_00047 42749 5 Skin 0.08 protein_coding synonymous_variant LOW 252T>C Leu84Leu
M0059496 ONKJLKNJ_00047 42834 5 Skin 0.08 protein_coding missense_variant MODERATE 337G>A Ala113Thr
M0059497 ONKJLKNJ_00047 42932 3 Skin 0.05 protein_coding synonymous_variant LOW 435G>A Ala145Ala
M0059498 ONKJLKNJ_00047 43324 7 Skin 0.11 protein_coding missense_variant MODERATE 827G>A Ser276Asn
M0059499 ONKJLKNJ_00047 43349 6 Skin 0.10 protein_coding synonymous_variant LOW 852C>A Ala284Ala
M0059500 ONKJLKNJ_00047 43508 7 Skin 0.11 protein_coding synonymous_variant LOW 1011C>T Ser337Ser
M0059501 ONKJLKNJ_00047 43560 6 Skin 0.10 protein_coding missense_variant MODERATE 1063G>A Val355Ile
M0059502 ONKJLKNJ_00047 43621 6 Skin 0.10 protein_coding missense_variant MODERATE 1124C>A Ser375Tyr
M0059503 ONKJLKNJ_00041 43771 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4713T>C None
M0059504 ONKJLKNJ_00041 43816 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4758C>T None
M0059505 ONKJLKNJ_00041 43817 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4759G>A None
M0059506 ONKJLKNJ_00041 43856 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4798T>A None
M0059507 ONKJLKNJ_00041 44009 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4951G>T None
M0059508 ONKJLKNJ_00067 59481 3 Skin 0.05 protein_coding synonymous_variant LOW 87T>C Ser29Ser
M0059509 ONKJLKNJ_00068 59960 4 Skin 0.07 protein_coding missense_variant MODERATE 241G>A Glu81Lys
M0059510 ONKJLKNJ_00068 59978 5 Skin 0.08 protein_coding missense_variant MODERATE 259A>G Asn87Asp
M0059511 ONKJLKNJ_00068 60010 3 Skin 0.05 protein_coding synonymous_variant LOW 291C>T Ser97Ser
M0059512 ONKJLKNJ_00068 60229 3 Skin 0.05 protein_coding synonymous_variant LOW 510T>C Asn170Asn
M0059513 ONKJLKNJ_00068 60335 3 Skin 0.05 protein_coding synonymous_variant LOW 616C>T Leu206Leu
M0059514 ONKJLKNJ_00041 38468 6 Skin 0.10 protein_coding synonymous_variant LOW 591C>T Ser197Ser
M0059515 ONKJLKNJ_00036 39173 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4431G>A None
M0059516 ONKJLKNJ_00042 40169 3 Skin 0.05 protein_coding synonymous_variant LOW 576T>A Ile192Ile
M0059517 ONKJLKNJ_00040 40797 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2697A>G None
M0059518 ONKJLKNJ_00040 40814 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2714G>A None
M0059519 ONKJLKNJ_00040 40833 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2733C>T None
M0059520 ONKJLKNJ_00040 40835 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2735C>T None
M0059521 ONKJLKNJ_00044 40966 3 Skin 0.05 protein_coding missense_variant MODERATE 124C>G Gln42Glu
M0059522 ONKJLKNJ_00040 41078 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -2978T>C None
M0059523 ONKJLKNJ_00040 41079 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -2979G>A None
M0059524 ONKJLKNJ_00045 41134 3 Skin 0.05 protein_coding missense_variant MODERATE 47C>A Thr16Lys
M0059525 ONKJLKNJ_00045 41135 4 Skin 0.07 protein_coding synonymous_variant LOW 48G>A Thr16Thr
M0059526 ONKJLKNJ_00045 41138 4 Skin 0.07 protein_coding missense_variant MODERATE 51A>T Lys17Asn
M0059527 ONKJLKNJ_00045 41174 3 Skin 0.05 protein_coding synonymous_variant LOW 87A>G Leu29Leu
M0059528 ONKJLKNJ_00045 41180 4 Skin 0.07 protein_coding missense_variant MODERATE 93T>G Asn31Lys
M0059529 ONKJLKNJ_00045 41188 4 Skin 0.07 protein_coding missense_variant MODERATE 101A>G Asn34Ser
M0059530 ONKJLKNJ_00040 41211 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3111C>T None
M0059531 ONKJLKNJ_00040 41306 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3206C>T None
M0059532 ONKJLKNJ_00040 41350 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3250C>T None
M0059533 ONKJLKNJ_00040 41358 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3258T>C None
M0059534 ONKJLKNJ_00040 41408 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3308G>A None
M0059535 ONKJLKNJ_00040 41414 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3314C>T None
M0059536 ONKJLKNJ_00040 41444 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3344T>G None
M0059537 ONKJLKNJ_00040 41447 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3347T>C None
M0059538 ONKJLKNJ_00040 41470 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3370G>A None
M0059539 ONKJLKNJ_00040 41482 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3382T>C None
M0059540 ONKJLKNJ_00046 41517 4 Skin 0.07 protein_coding synonymous_variant LOW 7T>C Leu3Leu
M0059541 ONKJLKNJ_00046 41538 4 Skin 0.07 protein_coding synonymous_variant LOW 28C>T Leu10Leu
M0059542 ONKJLKNJ_00046 41561 3 Skin 0.05 protein_coding synonymous_variant LOW 51G>A Gly17Gly
M0059543 ONKJLKNJ_00046 41563 3 Skin 0.05 protein_coding missense_variant MODERATE 53A>G Asn18Ser
M0059544 ONKJLKNJ_00046 41593 3 Skin 0.05 protein_coding missense_variant MODERATE 83G>A Gly28Asp
M0059545 ONKJLKNJ_00046 41619 3 Skin 0.05 protein_coding missense_variant MODERATE 109G>C Glu37Gln
M0059546 ONKJLKNJ_00046 41621 3 Skin 0.05 protein_coding synonymous_variant LOW 111G>A Glu37Glu
M0059547 ONKJLKNJ_00046 41637 3 Skin 0.05 protein_coding missense_variant MODERATE 127C>A Gln43Lys
M0059548 ONKJLKNJ_00046 41645 3 Skin 0.05 protein_coding synonymous_variant LOW 135C>G Val45Val
M0059549 ONKJLKNJ_00046 41665 3 Skin 0.05 protein_coding missense_variant MODERATE 155G>A Arg52Lys
M0059550 ONKJLKNJ_00046 41684 3 Skin 0.05 protein_coding synonymous_variant LOW 174T>C Phe58Phe
M0059551 ONKJLKNJ_00046 41687 3 Skin 0.05 protein_coding synonymous_variant LOW 177T>C Asp59Asp
M0059552 ONKJLKNJ_00046 41726 3 Skin 0.05 protein_coding synonymous_variant LOW 216C>T Ser72Ser
M0059553 ONKJLKNJ_00046 41729 3 Skin 0.05 protein_coding synonymous_variant LOW 219A>G Glu73Glu
M0059554 ONKJLKNJ_00046 41733 3 Skin 0.05 protein_coding synonymous_variant LOW 223C>T Leu75Leu
M0059555 ONKJLKNJ_00046 41744 3 Skin 0.05 protein_coding synonymous_variant LOW 234C>T Ser78Ser
M0059556 ONKJLKNJ_00046 41765 3 Skin 0.05 protein_coding synonymous_variant LOW 255A>T Ile85Ile
M0059557 ONKJLKNJ_00046 41768 3 Skin 0.05 protein_coding synonymous_variant LOW 258C>T Tyr86Tyr
M0059558 ONKJLKNJ_00046 41774 3 Skin 0.05 protein_coding synonymous_variant LOW 264C>T Asp88Asp
M0059559 ONKJLKNJ_00046 41777 3 Skin 0.05 protein_coding synonymous_variant LOW 267G>A Gln89Gln
M0059560 ONKJLKNJ_00046 41786 4 Skin 0.07 protein_coding synonymous_variant LOW 276G>A Glu92Glu
M0059561 ONKJLKNJ_00046 41798 3 Skin 0.05 protein_coding synonymous_variant LOW 288C>T Ile96Ile
M0059562 ONKJLKNJ_00046 41811 4 Skin 0.07 protein_coding missense_variant MODERATE 301G>C Glu101Gln
M0059563 ONKJLKNJ_00046 41824 4 Skin 0.07 protein_coding missense_variant MODERATE 314C>T Thr105Ile
M0059564 ONKJLKNJ_00046 42181 4 Skin 0.07 protein_coding missense_variant MODERATE 671T>C Val224Ala
M0059565 ONKJLKNJ_00040 42359 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4259C>T None
M0059566 ONKJLKNJ_00040 42369 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4269A>T None
M0059567 ONKJLKNJ_00040 42371 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4271A>G None
M0059568 ONKJLKNJ_00047 42507 5 Skin 0.08 protein_coding missense_variant MODERATE 10C>T Leu4Phe
M0059569 ONKJLKNJ_00047 42569 3 Skin 0.05 protein_coding missense_variant MODERATE 72G>A Met24Ile
M0059570 ONKJLKNJ_00047 42578 4 Skin 0.07 protein_coding synonymous_variant LOW 81T>A Ala27Ala
M0059571 ONKJLKNJ_00047 42593 4 Skin 0.07 protein_coding synonymous_variant LOW 96G>A Gln32Gln
M0059572 ONKJLKNJ_00047 42626 4 Skin 0.07 protein_coding missense_variant MODERATE 129C>A Phe43Leu
M0059573 ONKJLKNJ_00047 42636 3 Skin 0.05 protein_coding stop_gained HIGH 139C>T Gln47*
M0059574 ONKJLKNJ_00047 42637 4 Skin 0.07 protein_coding missense_variant MODERATE 140A>C Gln47Pro
M0059575 ONKJLKNJ_00047 42638 3 Skin 0.05 protein_coding synonymous_variant LOW 141G>A Gln47Gln
M0059576 ONKJLKNJ_00047 42680 4 Skin 0.07 protein_coding synonymous_variant LOW 183C>A Gly61Gly
M0059577 ONKJLKNJ_00047 42684 4 Skin 0.07 protein_coding missense_variant MODERATE 187A>G Ile63Val
M0059578 ONKJLKNJ_00047 42700 3 Skin 0.05 protein_coding missense_variant MODERATE 203A>G His68Arg
M0059579 ONKJLKNJ_00047 42746 3 Skin 0.05 protein_coding synonymous_variant LOW 249C>T Thr83Thr
M0059580 ONKJLKNJ_00047 42828 3 Skin 0.05 protein_coding missense_variant MODERATE 331A>C Met111Leu
M0059581 ONKJLKNJ_00047 42933 3 Skin 0.05 protein_coding missense_variant MODERATE 436A>G Thr146Ala
M0059582 ONKJLKNJ_00047 42994 3 Skin 0.05 protein_coding missense_variant MODERATE 497A>G Glu166Gly
M0059583 ONKJLKNJ_00047 43005 3 Skin 0.05 protein_coding missense_variant MODERATE 508G>A Glu170Lys
M0059584 ONKJLKNJ_00047 43482 3 Skin 0.05 protein_coding missense_variant MODERATE 985A>G Ile329Val
M0059585 ONKJLKNJ_00047 43629 4 Skin 0.07 protein_coding missense_variant MODERATE 1132G>A Val378Ile
M0059586 ONKJLKNJ_00047 43631 5 Skin 0.08 protein_coding synonymous_variant LOW 1134T>C Val378Val
M0059587 ONKJLKNJ_00047 43667 4 Skin 0.07 protein_coding synonymous_variant LOW 1170T>C His390His
M0059588 ONKJLKNJ_00047 43669 3 Skin 0.05 protein_coding missense_variant MODERATE 1172C>T Pro391Leu
M0059589 ONKJLKNJ_00041 43783 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4725T>C None
M0059590 ONKJLKNJ_00041 43907 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4849T>C None
M0059591 ONKJLKNJ_00041 43949 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4891C>T None
M0059592 ONKJLKNJ_00062 58232 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2935T>G None
M0059593 ONKJLKNJ_00062 58234 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2937A>C None
M0059594 ONKJLKNJ_00062 58237 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2940C>T None
M0059595 ONKJLKNJ_00067 58842 4 Skin 0.07 protein_coding synonymous_variant LOW 726C>G Gly242Gly
M0059596 ONKJLKNJ_00067 58848 6 Skin 0.10 protein_coding synonymous_variant LOW 720T>C Ala240Ala
M0059597 ONKJLKNJ_00067 59360 3 Skin 0.05 protein_coding synonymous_variant LOW 208C>T Leu70Leu
M0059598 ONKJLKNJ_00069 60939 7 Skin 0.11 protein_coding missense_variant MODERATE 152C>T Ala51Val
M0059599 ONKJLKNJ_00069 61007 3 Skin 0.05 protein_coding synonymous_variant LOW 220C>T Leu74Leu
M0059600 ONKJLKNJ_00069 61111 3 Skin 0.05 protein_coding synonymous_variant LOW 324C>T Asp108Asp
M0059601 ONKJLKNJ_00069 61249 3 Skin 0.05 protein_coding synonymous_variant LOW 462C>T Gly154Gly
M0059602 ONKJLKNJ_00069 61379 3 Skin 0.05 protein_coding missense_variant MODERATE 592C>T Leu198Phe
M0059603 ONKJLKNJ_00069 61454 5 Skin 0.08 protein_coding missense_variant MODERATE 667A>G Lys223Glu
M0059604 ONKJLKNJ_00070 61667 4 Skin 0.07 protein_coding missense_variant MODERATE 13T>C Tyr5His
M0059605 ONKJLKNJ_00070 61735 4 Skin 0.07 protein_coding synonymous_variant LOW 81C>T Val27Val
M0059606 ONKJLKNJ_00069 60854 5 Skin 0.08 protein_coding missense_variant MODERATE 67C>T Leu23Phe
M0059607 ONKJLKNJ_00067 58446 3 Skin 0.05 protein_coding synonymous_variant LOW 1122A>G Leu374Leu
M0059608 ONKJLKNJ_00067 58470 3 Skin 0.05 protein_coding synonymous_variant LOW 1098T>C Gly366Gly
M0059609 ONKJLKNJ_00067 58484 4 Skin 0.07 protein_coding missense_variant MODERATE 1084G>A Val362Ile
M0059610 ONKJLKNJ_00067 58510 3 Skin 0.05 protein_coding missense_variant MODERATE 1058A>G Asn353Ser
M0059611 ONKJLKNJ_00067 58548 5 Skin 0.08 protein_coding synonymous_variant LOW 1020T>A Ala340Ala
M0059612 ONKJLKNJ_00067 58598 3 Skin 0.05 protein_coding missense_variant MODERATE 970G>A Val324Ile
M0059613 ONKJLKNJ_00067 58604 5 Skin 0.08 protein_coding missense_variant MODERATE 964C>T Pro322Ser
M0059614 ONKJLKNJ_00067 58624 5 Skin 0.08 protein_coding missense_variant MODERATE 944T>A Ile315Asn
M0059615 ONKJLKNJ_00067 58632 5 Skin 0.08 protein_coding synonymous_variant LOW 936G>A Leu312Leu
M0059616 ONKJLKNJ_00067 58634 3 Skin 0.05 protein_coding synonymous_variant LOW 934C>T Leu312Leu
M0059617 ONKJLKNJ_00067 58650 4 Skin 0.07 protein_coding synonymous_variant LOW 918A>C Ala306Ala
M0059618 ONKJLKNJ_00067 58685 3 Skin 0.05 protein_coding missense_variant MODERATE 883G>A Val295Ile
M0059619 ONKJLKNJ_00067 58694 3 Skin 0.05 protein_coding synonymous_variant LOW 874T>C Leu292Leu
M0059620 ONKJLKNJ_00067 58967 3 Skin 0.05 protein_coding synonymous_variant LOW 601T>C Leu201Leu
M0059621 ONKJLKNJ_00067 59285 3 Skin 0.05 protein_coding missense_variant MODERATE 283A>G Ile95Val
M0059622 ONKJLKNJ_00067 59289 3 Skin 0.05 protein_coding synonymous_variant LOW 279T>C Tyr93Tyr
M0059623 ONKJLKNJ_00067 59294 3 Skin 0.05 protein_coding missense_variant MODERATE 274A>G Ile92Val
M0059624 ONKJLKNJ_00067 59296 3 Skin 0.05 protein_coding missense_variant MODERATE 272T>C Leu91Ser
M0059625 ONKJLKNJ_00067 59297 3 Skin 0.05 protein_coding missense_variant MODERATE 271T>A Leu91Met
M0059626 ONKJLKNJ_00041 38499 3 Skin 0.05 protein_coding missense_variant MODERATE 560T>C Met187Thr
M0059627 ONKJLKNJ_00041 38529 3 Skin 0.05 protein_coding missense_variant MODERATE 530A>G Asn177Ser
M0059628 ONKJLKNJ_00041 38544 3 Skin 0.05 protein_coding missense_variant MODERATE 515A>G Asn172Ser
M0059629 ONKJLKNJ_00041 38628 6 Skin 0.10 protein_coding missense_variant MODERATE 431A>G Gln144Arg
M0059630 ONKJLKNJ_00041 38643 3 Skin 0.05 protein_coding missense_variant MODERATE 416A>G Tyr139Cys
M0059631 ONKJLKNJ_00047 43313 3 Skin 0.05 protein_coding synonymous_variant LOW 816T>C Ala272Ala
M0059632 ONKJLKNJ_00069 60814 3 Skin 0.05 protein_coding synonymous_variant LOW 27A>G Lys9Lys
M0059633 ONKJLKNJ_00038 35327 3 Skin 0.05 protein_coding missense_variant MODERATE 292A>G Lys98Glu
M0059634 ONKJLKNJ_00068 60188 3 Skin 0.05 protein_coding missense_variant MODERATE 469A>G Asn157Asp






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
ONKJLKNJ_00014 AKL93188.1|GH5 74.5 1.31e-229 1 426 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term