Annotation Categories of the Plasmid Cluster
Summary of the plasmid cluster
Basic Information about the Plasmid Cluster
Cluster Information |
Plasmid Cluster ID |
C185 |
Reference Plasmid |
CP103159.1 |
Reference Plasmid Size |
70218 |
Reference Plasmid GC Content |
0.41 |
Reference Plasmid Mobility Type |
non-mobilizable |
Mutation sites in the plasmid cluster
The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..
mutid |
gname |
pos |
count |
tissue |
frequnt |
biotype |
consequence |
impact |
nucchange |
aachange |
M0146502 |
MPBOPBDB_00012 |
8897 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
198A>G |
Glu66Glu |
M0146503 |
MPBOPBDB_00012 |
8993 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
102A>G |
Gln34Gln |
M0146504 |
MPBOPBDB_00012 |
9023 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
72A>T |
Thr24Thr |
M0146505 |
MPBOPBDB_00005 |
9480 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3898C>T |
None |
M0146506 |
MPBOPBDB_00005 |
9696 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4114T>C |
None |
M0146507 |
MPBOPBDB_00023 |
18075 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
858A>G |
Glu286Glu |
M0146508 |
MPBOPBDB_00023 |
18078 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
855G>A |
Thr285Thr |
M0146509 |
MPBOPBDB_00023 |
18102 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
831T>C |
Leu277Leu |
M0146510 |
MPBOPBDB_00023 |
18108 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
825C>T |
Arg275Arg |
M0146511 |
MPBOPBDB_00023 |
18153 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
780A>C |
Ser260Ser |
M0146512 |
MPBOPBDB_00023 |
18171 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
762C>T |
Ser254Ser |
M0146513 |
MPBOPBDB_00023 |
18175 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
758G>A |
Gly253Asp |
M0146514 |
MPBOPBDB_00023 |
18186 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
747T>C |
Arg249Arg |
M0146515 |
MPBOPBDB_00023 |
18204 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
729G>A |
Lys243Lys |
M0146516 |
MPBOPBDB_00023 |
18213 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
720A>T |
Pro240Pro |
M0146517 |
MPBOPBDB_00023 |
18273 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
660T>C |
Thr220Thr |
M0146518 |
MPBOPBDB_00024 |
19008 |
6 |
Gut |
0.20 |
protein_coding |
missense_variant |
MODERATE |
371G>A |
Arg124Lys |
M0146519 |
MPBOPBDB_00024 |
19181 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
198C>T |
Asp66Asp |
M0146520 |
MPBOPBDB_00024 |
19349 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
30T>C |
Ala10Ala |
M0146521 |
MPBOPBDB_00024 |
19355 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
24T>C |
Tyr8Tyr |
M0146522 |
MPBOPBDB_00024 |
19373 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
6T>C |
Ser2Ser |
M0146523 |
MPBOPBDB_00025 |
19381 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
279T>G |
Leu93Leu |
M0146524 |
MPBOPBDB_00020 |
19785 |
7 |
Gut |
0.23 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4756T>G |
None |
M0146525 |
MPBOPBDB_00026 |
19845 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
231A>T |
Pro77Pro |
M0146526 |
MPBOPBDB_00026 |
19863 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
213A>G |
Val71Val |
M0146527 |
MPBOPBDB_00026 |
19997 |
8 |
Gut |
0.27 |
protein_coding |
missense_variant |
MODERATE |
79T>G |
Ser27Ala |
M0146528 |
MPBOPBDB_00027 |
20222 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
249G>T |
Arg83Arg |
M0146529 |
MPBOPBDB_00027 |
20309 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
162A>G |
Gln54Gln |
M0146530 |
MPBOPBDB_00029 |
21303 |
5 |
Gut |
0.17 |
protein_coding |
missense_variant |
MODERATE |
1193G>A |
Ser398Asn |
M0146531 |
MPBOPBDB_00029 |
21392 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1104C>T |
Ser368Ser |
M0146532 |
MPBOPBDB_00029 |
21499 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
997T>C |
Leu333Leu |
M0146533 |
MPBOPBDB_00029 |
21533 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
963G>A |
Gln321Gln |
M0146534 |
MPBOPBDB_00029 |
21596 |
7 |
Gut |
0.23 |
protein_coding |
missense_variant |
MODERATE |
900T>G |
Phe300Leu |
M0146535 |
MPBOPBDB_00029 |
21626 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
870A>G |
Glu290Glu |
M0146536 |
MPBOPBDB_00029 |
21629 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
867T>C |
Ser289Ser |
M0146537 |
MPBOPBDB_00029 |
21635 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
861C>T |
Gly287Gly |
M0146538 |
MPBOPBDB_00029 |
21671 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
825T>G |
Leu275Leu |
M0146539 |
MPBOPBDB_00029 |
21689 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
807G>A |
Glu269Glu |
M0146540 |
MPBOPBDB_00029 |
21890 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
606T>C |
Gly202Gly |
M0146541 |
MPBOPBDB_00029 |
22034 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
462T>C |
Asn154Asn |
M0146542 |
MPBOPBDB_00029 |
22193 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
303C>T |
Ile101Ile |
M0146543 |
MPBOPBDB_00029 |
22460 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
36T>G |
Ile12Met |
M0146544 |
MPBOPBDB_00030 |
22533 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
357A>G |
Leu119Leu |
M0146545 |
MPBOPBDB_00030 |
22815 |
5 |
Gut |
0.17 |
protein_coding |
missense_variant |
MODERATE |
75T>G |
Ile25Met |
M0146546 |
MPBOPBDB_00030 |
22833 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
57G>T |
Arg19Arg |
M0146547 |
MPBOPBDB_00023 |
22936 |
6 |
Gut |
0.20 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4004G>T |
None |
M0146548 |
MPBOPBDB_00023 |
22940 |
5 |
Gut |
0.17 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4008G>A |
None |
M0146549 |
MPBOPBDB_00023 |
22944 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4012C>A |
None |
M0146550 |
MPBOPBDB_00023 |
22999 |
5 |
Gut |
0.17 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4067G>T |
None |
M0146551 |
MPBOPBDB_00023 |
23009 |
5 |
Gut |
0.17 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4077A>G |
None |
M0146552 |
MPBOPBDB_00023 |
23117 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4185C>T |
None |
M0146553 |
MPBOPBDB_00023 |
23128 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4196A>T |
None |
M0146554 |
MPBOPBDB_00023 |
23157 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4225A>T |
None |
M0146555 |
MPBOPBDB_00023 |
23188 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4256A>T |
None |
M0146556 |
MPBOPBDB_00031 |
23640 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
324A>C |
Gly108Gly |
M0146557 |
MPBOPBDB_00031 |
23643 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
327A>T |
Val109Val |
M0146558 |
MPBOPBDB_00031 |
23644 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
328G>A |
Val110Ile |
M0146559 |
MPBOPBDB_00031 |
23676 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
360T>C |
Ile120Ile |
M0146560 |
MPBOPBDB_00032 |
24442 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
405G>A |
Ala135Ala |
M0146561 |
MPBOPBDB_00032 |
24448 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
411T>A |
Val137Val |
M0146562 |
MPBOPBDB_00027 |
25269 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4799C>T |
None |
M0146563 |
MPBOPBDB_00027 |
25272 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4802A>G |
None |
M0146564 |
MPBOPBDB_00034 |
25354 |
3 |
Gut |
0.10 |
protein_coding |
stop_gained |
HIGH |
37A>T |
Lys13* |
M0146565 |
MPBOPBDB_00034 |
25408 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
91C>T |
Leu31Leu |
M0146566 |
MPBOPBDB_00034 |
25536 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
219A>G |
Ser73Ser |
M0146567 |
MPBOPBDB_00034 |
25551 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
234C>T |
Cys78Cys |
M0146568 |
MPBOPBDB_00034 |
25609 |
7 |
Gut |
0.23 |
protein_coding |
missense_variant |
MODERATE |
292A>G |
Thr98Ala |
M0146569 |
MPBOPBDB_00034 |
25623 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
306T>C |
Gly102Gly |
M0146570 |
MPBOPBDB_00034 |
25644 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
327A>G |
Lys109Lys |
M0146571 |
MPBOPBDB_00034 |
25827 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
510A>G |
Thr170Thr |
M0146572 |
MPBOPBDB_00034 |
26025 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
708A>T |
Thr236Thr |
M0146573 |
MPBOPBDB_00034 |
26028 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
711A>G |
Val237Val |
M0146574 |
MPBOPBDB_00034 |
26067 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
750C>T |
Asn250Asn |
M0146575 |
MPBOPBDB_00034 |
26076 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
759T>C |
Asp253Asp |
M0146576 |
MPBOPBDB_00034 |
26091 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
774A>T |
Val258Val |
M0146577 |
MPBOPBDB_00034 |
26148 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
831A>G |
Glu277Glu |
M0146578 |
MPBOPBDB_00034 |
26160 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
843G>A |
Lys281Lys |
M0146579 |
MPBOPBDB_00034 |
26169 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
852A>G |
Glu284Glu |
M0146580 |
MPBOPBDB_00034 |
26178 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
861C>A |
Ala287Ala |
M0146581 |
MPBOPBDB_00034 |
26232 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
915A>G |
Lys305Lys |
M0146582 |
MPBOPBDB_00034 |
26268 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
951G>C |
Gly317Gly |
M0146583 |
MPBOPBDB_00029 |
26549 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4054T>G |
None |
M0146584 |
MPBOPBDB_00029 |
26646 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4151A>G |
None |
M0146585 |
MPBOPBDB_00029 |
26677 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4182G>T |
None |
M0146586 |
MPBOPBDB_00029 |
26678 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4183C>T |
None |
M0146587 |
MPBOPBDB_00029 |
26686 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4191A>G |
None |
M0146588 |
MPBOPBDB_00035 |
26877 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
102A>C |
Thr34Thr |
M0146589 |
MPBOPBDB_00035 |
26997 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
222T>C |
Asn74Asn |
M0146590 |
MPBOPBDB_00035 |
27096 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
321A>G |
Glu107Glu |
M0146591 |
MPBOPBDB_00035 |
27291 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
516G>A |
Thr172Thr |
M0146592 |
MPBOPBDB_00029 |
27385 |
6 |
Gut |
0.20 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4890T>C |
None |
M0146593 |
MPBOPBDB_00029 |
27391 |
6 |
Gut |
0.20 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4896A>C |
None |
M0146594 |
MPBOPBDB_00029 |
27392 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4897A>G |
None |
M0146595 |
MPBOPBDB_00029 |
27449 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4954A>G |
None |
M0146596 |
MPBOPBDB_00030 |
27508 |
11 |
Gut |
0.37 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4619T>C |
None |
M0146597 |
MPBOPBDB_00030 |
27530 |
7 |
Gut |
0.23 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4641G>C |
None |
M0146598 |
MPBOPBDB_00030 |
27541 |
9 |
Gut |
0.30 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4652A>T |
None |
M0146599 |
MPBOPBDB_00030 |
27558 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4669C>T |
None |
M0146600 |
MPBOPBDB_00030 |
27560 |
9 |
Gut |
0.30 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4671G>A |
None |
M0146601 |
MPBOPBDB_00030 |
27563 |
9 |
Gut |
0.30 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4674T>C |
None |
M0146602 |
MPBOPBDB_00036 |
27753 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
129A>G |
Gly43Gly |
M0146603 |
MPBOPBDB_00036 |
27819 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
195T>C |
Ala65Ala |
M0146604 |
MPBOPBDB_00036 |
28170 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
546T>C |
Asn182Asn |
M0146605 |
MPBOPBDB_00033 |
28807 |
10 |
Gut |
0.33 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3545T>C |
None |
M0146606 |
MPBOPBDB_00039 |
28952 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
138T>C |
Ser46Ser |
M0146607 |
MPBOPBDB_00039 |
28979 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
165T>C |
Ala55Ala |
M0146608 |
MPBOPBDB_00041 |
29820 |
11 |
Gut |
0.37 |
protein_coding |
synonymous_variant |
LOW |
351C>T |
Asn117Asn |
M0146609 |
MPBOPBDB_00041 |
30555 |
12 |
Gut |
0.40 |
protein_coding |
synonymous_variant |
LOW |
1086T>C |
Thr362Thr |
M0146610 |
MPBOPBDB_00041 |
30696 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1227C>T |
Phe409Phe |
M0146611 |
MPBOPBDB_00041 |
30765 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
1296T>C |
Ile432Ile |
M0146612 |
MPBOPBDB_00041 |
30912 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
1443C>A |
Ser481Ser |
M0146613 |
MPBOPBDB_00041 |
30963 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
1494C>T |
Gly498Gly |
M0146614 |
MPBOPBDB_00043 |
32366 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
135T>C |
Val45Val |
M0146615 |
MPBOPBDB_00043 |
32378 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
147T>C |
Leu49Leu |
M0146616 |
MPBOPBDB_00043 |
32381 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
150A>C |
Ile50Ile |
M0146617 |
MPBOPBDB_00043 |
32408 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
177A>G |
Lys59Lys |
M0146618 |
MPBOPBDB_00043 |
32426 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
195T>A |
Leu65Leu |
M0146619 |
MPBOPBDB_00043 |
32480 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
249A>T |
Gly83Gly |
M0146620 |
MPBOPBDB_00043 |
32726 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
495C>T |
Ser165Ser |
M0146621 |
MPBOPBDB_00043 |
32792 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
561A>G |
Arg187Arg |
M0146622 |
MPBOPBDB_00045 |
33259 |
11 |
Gut |
0.37 |
protein_coding |
missense_variant |
MODERATE |
30A>T |
Glu10Asp |
M0146623 |
MPBOPBDB_00045 |
33262 |
11 |
Gut |
0.37 |
protein_coding |
synonymous_variant |
LOW |
33A>C |
Ala11Ala |
M0146624 |
MPBOPBDB_00045 |
33379 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
150A>G |
Glu50Glu |
M0146625 |
MPBOPBDB_00045 |
33400 |
12 |
Gut |
0.40 |
protein_coding |
synonymous_variant |
LOW |
171G>A |
Arg57Arg |
M0146626 |
MPBOPBDB_00045 |
33460 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
231T>G |
Leu77Leu |
M0146627 |
MPBOPBDB_00045 |
33706 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
477C>T |
Val159Val |
M0146628 |
MPBOPBDB_00046 |
33914 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
123T>C |
Ala41Ala |
M0146629 |
MPBOPBDB_00046 |
34086 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
295C>T |
Leu99Leu |
M0146630 |
MPBOPBDB_00046 |
34199 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
408T>C |
Ala136Ala |
M0146631 |
MPBOPBDB_00046 |
34826 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1035C>A |
Ile345Ile |
M0146632 |
MPBOPBDB_00047 |
34912 |
12 |
Gut |
0.40 |
protein_coding |
synonymous_variant |
LOW |
66T>C |
Gly22Gly |
M0146633 |
MPBOPBDB_00047 |
34987 |
10 |
Gut |
0.33 |
protein_coding |
missense_variant |
MODERATE |
141A>C |
Arg47Ser |
M0146634 |
MPBOPBDB_00047 |
35140 |
12 |
Gut |
0.40 |
protein_coding |
synonymous_variant |
LOW |
294G>A |
Thr98Thr |
M0146635 |
MPBOPBDB_00047 |
35221 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
375T>A |
Val125Val |
M0146636 |
MPBOPBDB_00048 |
35654 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
156C>T |
Ala52Ala |
M0146637 |
MPBOPBDB_00048 |
36026 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
528C>T |
Asp176Asp |
M0146638 |
MPBOPBDB_00048 |
36110 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
612T>C |
Tyr204Tyr |
M0146639 |
MPBOPBDB_00049 |
36841 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
96G>A |
Thr32Thr |
M0146640 |
MPBOPBDB_00050 |
37269 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
306C>T |
Asn102Asn |
M0146641 |
MPBOPBDB_00050 |
37479 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
516A>G |
Lys172Lys |
M0146642 |
MPBOPBDB_00050 |
37791 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
828G>A |
Lys276Lys |
M0146643 |
MPBOPBDB_00052 |
38582 |
9 |
Gut |
0.30 |
protein_coding |
missense_variant |
MODERATE |
462A>G |
Ile154Met |
M0146644 |
MPBOPBDB_00052 |
38757 |
11 |
Gut |
0.37 |
protein_coding |
missense_variant |
MODERATE |
637A>T |
Asn213Tyr |
M0146645 |
MPBOPBDB_00052 |
38825 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
705A>G |
Lys235Lys |
M0146646 |
MPBOPBDB_00052 |
39044 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
924T>C |
Val308Val |
M0146647 |
MPBOPBDB_00052 |
39170 |
9 |
Gut |
0.30 |
protein_coding |
missense_variant |
MODERATE |
1050T>G |
Asn350Lys |
M0146648 |
MPBOPBDB_00052 |
39455 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1335T>A |
Pro445Pro |
M0146649 |
MPBOPBDB_00052 |
39467 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1347T>C |
Thr449Thr |
M0146650 |
MPBOPBDB_00053 |
39544 |
5 |
Gut |
0.17 |
protein_coding |
missense_variant |
MODERATE |
40G>A |
Val14Ile |
M0146651 |
MPBOPBDB_00054 |
39992 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
300C>T |
Phe100Phe |
M0146652 |
MPBOPBDB_00054 |
40082 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
390A>T |
Pro130Pro |
M0146653 |
MPBOPBDB_00054 |
40100 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
408C>T |
Asn136Asn |
M0146654 |
MPBOPBDB_00054 |
40157 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
465G>A |
Lys155Lys |
M0146655 |
MPBOPBDB_00054 |
40160 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
468G>T |
Leu156Leu |
M0146656 |
MPBOPBDB_00054 |
40264 |
9 |
Gut |
0.30 |
protein_coding |
missense_variant |
MODERATE |
572T>A |
Phe191Tyr |
M0146657 |
MPBOPBDB_00054 |
40349 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
657T>G |
Gly219Gly |
M0146658 |
MPBOPBDB_00054 |
40523 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
831C>A |
Ile277Ile |
M0146659 |
MPBOPBDB_00054 |
40610 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
918A>G |
Val306Val |
M0146660 |
MPBOPBDB_00054 |
40835 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
1143T>C |
Phe381Phe |
M0146661 |
MPBOPBDB_00054 |
40838 |
6 |
Gut |
0.20 |
protein_coding |
missense_variant |
MODERATE |
1146A>T |
Glu382Asp |
M0146662 |
MPBOPBDB_00055 |
41033 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
111A>T |
Thr37Thr |
M0146663 |
MPBOPBDB_00055 |
41168 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
246T>C |
Cys82Cys |
M0146664 |
MPBOPBDB_00055 |
41189 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
267C>T |
Asn89Asn |
M0146665 |
MPBOPBDB_00055 |
41190 |
9 |
Gut |
0.30 |
protein_coding |
missense_variant |
MODERATE |
268A>G |
Ile90Val |
M0146666 |
MPBOPBDB_00056 |
41400 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
144T>A |
Val48Val |
M0146667 |
MPBOPBDB_00056 |
41424 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
168G>A |
Leu56Leu |
M0146668 |
MPBOPBDB_00056 |
41439 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
183C>A |
Ile61Ile |
M0146669 |
MPBOPBDB_00056 |
41538 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
282G>C |
Val94Val |
M0146670 |
MPBOPBDB_00056 |
41556 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
300G>A |
Leu100Leu |
M0146671 |
MPBOPBDB_00056 |
41577 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
321C>T |
Phe107Phe |
M0146672 |
MPBOPBDB_00056 |
41580 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
324T>A |
Val108Val |
M0146673 |
MPBOPBDB_00056 |
41655 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
399A>G |
Lys133Lys |
M0146674 |
MPBOPBDB_00056 |
41658 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
402A>G |
Ser134Ser |
M0146675 |
MPBOPBDB_00056 |
41829 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
573A>G |
Ala191Ala |
M0146676 |
MPBOPBDB_00056 |
41883 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
627T>A |
Asp209Glu |
M0146677 |
MPBOPBDB_00056 |
41892 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
636A>G |
Pro212Pro |
M0146678 |
MPBOPBDB_00056 |
41988 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
732A>G |
Ser244Ser |
M0146679 |
MPBOPBDB_00056 |
42009 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
753A>T |
Val251Val |
M0146680 |
MPBOPBDB_00056 |
42010 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
754T>C |
Leu252Leu |
M0146681 |
MPBOPBDB_00056 |
42012 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
756G>A |
Leu252Leu |
M0146682 |
MPBOPBDB_00056 |
42018 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
762C>A |
Pro254Pro |
M0146683 |
MPBOPBDB_00056 |
42021 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
765A>G |
Lys255Lys |
M0146684 |
MPBOPBDB_00056 |
42045 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
789T>C |
Ser263Ser |
M0146685 |
MPBOPBDB_00056 |
42063 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
807T>A |
Ile269Ile |
M0146686 |
MPBOPBDB_00056 |
42201 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
945G>A |
Pro315Pro |
M0146687 |
MPBOPBDB_00056 |
42213 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
957C>A |
Ala319Ala |
M0146688 |
MPBOPBDB_00056 |
42504 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1248A>C |
Ala416Ala |
M0146689 |
MPBOPBDB_00056 |
42594 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1338C>T |
Ile446Ile |
M0146690 |
MPBOPBDB_00056 |
42621 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1365A>C |
Ile455Ile |
M0146691 |
MPBOPBDB_00056 |
42681 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
1425T>A |
Ala475Ala |
M0146692 |
MPBOPBDB_00056 |
42684 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1428C>T |
Val476Val |
M0146693 |
MPBOPBDB_00056 |
42747 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
1491A>C |
Gly497Gly |
M0146694 |
MPBOPBDB_00056 |
42765 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
1509G>A |
Lys503Lys |
M0146695 |
MPBOPBDB_00056 |
42768 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
1512G>A |
Thr504Thr |
M0146696 |
MPBOPBDB_00056 |
42840 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1584C>T |
Gly528Gly |
M0146697 |
MPBOPBDB_00056 |
42978 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1722C>T |
Cys574Cys |
M0146698 |
MPBOPBDB_00056 |
43014 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
1758T>C |
Leu586Leu |
M0146699 |
MPBOPBDB_00056 |
43107 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1851A>G |
Val617Val |
M0146700 |
MPBOPBDB_00056 |
43110 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1854C>T |
Asn618Asn |
M0146701 |
MPBOPBDB_00056 |
43116 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1860C>T |
Val620Val |
M0146702 |
MPBOPBDB_00056 |
43178 |
5 |
Gut |
0.17 |
protein_coding |
missense_variant |
MODERATE |
1922G>A |
Arg641Lys |
M0146703 |
MPBOPBDB_00057 |
43254 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
36T>G |
Val12Val |
M0146704 |
MPBOPBDB_00057 |
43428 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
210A>G |
Leu70Leu |
M0146705 |
MPBOPBDB_00057 |
43450 |
6 |
Gut |
0.20 |
protein_coding |
missense_variant |
MODERATE |
232G>A |
Ala78Thr |
M0146706 |
MPBOPBDB_00057 |
43500 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
282A>G |
Gln94Gln |
M0146707 |
MPBOPBDB_00058 |
43650 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-92C>T |
None |
M0146708 |
MPBOPBDB_00058 |
43660 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-82T>C |
None |
M0146709 |
MPBOPBDB_00058 |
43691 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-51A>G |
None |
M0146710 |
MPBOPBDB_00058 |
43720 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-22C>T |
None |
M0146711 |
MPBOPBDB_00058 |
43840 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
99C>T |
Cys33Cys |
M0146712 |
MPBOPBDB_00058 |
43894 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
153C>T |
Asn51Asn |
M0146713 |
MPBOPBDB_00058 |
43915 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
174G>A |
Val58Val |
M0146714 |
MPBOPBDB_00058 |
43942 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
201G>A |
Thr67Thr |
M0146715 |
MPBOPBDB_00058 |
43948 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
207C>T |
Leu69Leu |
M0146716 |
MPBOPBDB_00058 |
43984 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
243G>A |
Gly81Gly |
M0146717 |
MPBOPBDB_00058 |
44119 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
378T>C |
Leu126Leu |
M0146718 |
MPBOPBDB_00058 |
44122 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
381A>G |
Lys127Lys |
M0146719 |
MPBOPBDB_00058 |
44452 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
711C>T |
Ser237Ser |
M0146720 |
MPBOPBDB_00058 |
44507 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
766C>T |
Leu256Leu |
M0146721 |
MPBOPBDB_00058 |
44509 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
768A>G |
Leu256Leu |
M0146722 |
MPBOPBDB_00058 |
44646 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
905A>G |
Asn302Ser |
M0146723 |
MPBOPBDB_00059 |
44900 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
318A>T |
Leu106Phe |
M0146724 |
MPBOPBDB_00059 |
44902 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
316T>C |
Leu106Leu |
M0146725 |
MPBOPBDB_00059 |
44904 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
314C>A |
Pro105His |
M0146726 |
MPBOPBDB_00059 |
44909 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
309T>C |
Phe103Phe |
M0146727 |
MPBOPBDB_00059 |
44934 |
8 |
Gut |
0.27 |
protein_coding |
missense_variant |
MODERATE |
284T>C |
Leu95Ser |
M0146728 |
MPBOPBDB_00059 |
44972 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
246T>G |
Leu82Leu |
M0146729 |
MPBOPBDB_00059 |
45016 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
202C>T |
Leu68Phe |
M0146730 |
MPBOPBDB_00023 |
23219 |
6 |
Gut |
0.20 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4287A>C |
None |
M0146731 |
MPBOPBDB_00023 |
23308 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4376A>T |
None |
M0146732 |
MPBOPBDB_00026 |
24741 |
6 |
Gut |
0.20 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4666G>A |
None |
M0146733 |
MPBOPBDB_00026 |
24830 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4755C>T |
None |
M0146734 |
MPBOPBDB_00026 |
24875 |
6 |
Gut |
0.20 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4800C>T |
None |
M0146735 |
MPBOPBDB_00026 |
24913 |
6 |
Gut |
0.20 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4838A>G |
None |
M0146736 |
MPBOPBDB_00026 |
24937 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4862A>T |
None |
M0146737 |
MPBOPBDB_00026 |
24975 |
5 |
Gut |
0.17 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4900T>C |
None |
M0146738 |
MPBOPBDB_00026 |
25005 |
5 |
Gut |
0.17 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4930T>C |
None |
M0146739 |
MPBOPBDB_00026 |
25037 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4962T>C |
None |
M0146740 |
MPBOPBDB_00026 |
25046 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4971A>G |
None |
M0146741 |
MPBOPBDB_00026 |
25047 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4972G>A |
None |
M0146742 |
MPBOPBDB_00026 |
25048 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4973T>C |
None |
M0146743 |
MPBOPBDB_00026 |
25068 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4993C>T |
None |
M0146744 |
MPBOPBDB_00027 |
25078 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4608A>G |
None |
M0146745 |
MPBOPBDB_00027 |
25079 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4609G>A |
None |
M0146746 |
MPBOPBDB_00027 |
25080 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4610T>C |
None |
M0146747 |
MPBOPBDB_00033 |
25154 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
109A>G |
Lys37Glu |
M0146748 |
MPBOPBDB_00033 |
25179 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
84A>T |
Ile28Ile |
M0146749 |
MPBOPBDB_00033 |
25199 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
64G>A |
Ala22Thr |
M0146750 |
MPBOPBDB_00033 |
25227 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
36G>C |
Ser12Ser |
M0146751 |
MPBOPBDB_00033 |
25228 |
4 |
Gut |
0.13 |
protein_coding |
stop_gained |
HIGH |
35C>A |
Ser12* |
M0146752 |
MPBOPBDB_00033 |
25233 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
30C>T |
Phe10Phe |
M0146753 |
MPBOPBDB_00034 |
25515 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
198G>A |
Leu66Leu |
M0146754 |
MPBOPBDB_00034 |
25656 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
339G>C |
Glu113Asp |
M0146755 |
MPBOPBDB_00034 |
25767 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
450A>G |
Lys150Lys |
M0146756 |
MPBOPBDB_00034 |
25809 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
492T>C |
Phe164Phe |
M0146757 |
MPBOPBDB_00034 |
25812 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
495G>A |
Gly165Gly |
M0146758 |
MPBOPBDB_00034 |
25830 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
513G>A |
Lys171Lys |
M0146759 |
MPBOPBDB_00034 |
25905 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
588A>G |
Lys196Lys |
M0146760 |
MPBOPBDB_00034 |
25914 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
597G>A |
Arg199Arg |
M0146761 |
MPBOPBDB_00034 |
25917 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
600C>T |
Cys200Cys |
M0146762 |
MPBOPBDB_00034 |
25923 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
606C>A |
Pro202Pro |
M0146763 |
MPBOPBDB_00034 |
25926 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
609T>C |
Asn203Asn |
M0146764 |
MPBOPBDB_00034 |
25930 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
613C>A |
Arg205Arg |
M0146765 |
MPBOPBDB_00034 |
25932 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
615A>G |
Arg205Arg |
M0146766 |
MPBOPBDB_00034 |
25939 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
622C>A |
Arg208Arg |
M0146767 |
MPBOPBDB_00034 |
25957 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
640T>C |
Leu214Leu |
M0146768 |
MPBOPBDB_00034 |
26388 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1071T>C |
Ser357Ser |
M0146769 |
MPBOPBDB_00034 |
26404 |
5 |
Gut |
0.17 |
protein_coding |
missense_variant |
MODERATE |
1087A>T |
Ile363Leu |
M0146770 |
MPBOPBDB_00034 |
26429 |
5 |
Gut |
0.17 |
protein_coding |
missense_variant |
MODERATE |
1112C>T |
Thr371Ile |
M0146771 |
MPBOPBDB_00034 |
26430 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1113T>A |
Thr371Thr |
M0146772 |
MPBOPBDB_00029 |
26544 |
5 |
Gut |
0.17 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4049G>A |
None |
M0146773 |
MPBOPBDB_00029 |
26551 |
5 |
Gut |
0.17 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4056A>T |
None |
M0146774 |
MPBOPBDB_00035 |
26797 |
6 |
Gut |
0.20 |
protein_coding |
missense_variant |
MODERATE |
22A>C |
Ser8Arg |
M0146775 |
MPBOPBDB_00035 |
26799 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
24C>T |
Ser8Ser |
M0146776 |
MPBOPBDB_00035 |
26807 |
5 |
Gut |
0.17 |
protein_coding |
missense_variant |
MODERATE |
32C>A |
Pro11Gln |
M0146777 |
MPBOPBDB_00035 |
26808 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
33G>A |
Pro11Pro |
M0146778 |
MPBOPBDB_00035 |
26829 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
54A>G |
Glu18Glu |
M0146779 |
MPBOPBDB_00035 |
26832 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
57G>A |
Glu19Glu |
M0146780 |
MPBOPBDB_00035 |
26838 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
63C>T |
Phe21Phe |
M0146781 |
MPBOPBDB_00035 |
26844 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
69A>T |
Pro23Pro |
M0146782 |
MPBOPBDB_00035 |
26859 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
84A>G |
Lys28Lys |
M0146783 |
MPBOPBDB_00035 |
26965 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
190G>A |
Ala64Thr |
M0146784 |
MPBOPBDB_00035 |
27006 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
231C>T |
Phe77Phe |
M0146785 |
MPBOPBDB_00029 |
27452 |
6 |
Gut |
0.20 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4957A>C |
None |
M0146786 |
MPBOPBDB_00062 |
52115 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4138C>T |
None |
M0146787 |
MPBOPBDB_00062 |
52290 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4313A>G |
None |
M0146788 |
MPBOPBDB_00036 |
27708 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
84G>A |
Lys28Lys |
M0146789 |
MPBOPBDB_00036 |
27804 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
180A>G |
Thr60Thr |
M0146790 |
MPBOPBDB_00036 |
27885 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
261C>T |
Gly87Gly |
M0146791 |
MPBOPBDB_00038 |
28505 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
76C>T |
Pro26Ser |
M0146792 |
MPBOPBDB_00038 |
28645 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
216G>A |
Glu72Glu |
M0146793 |
MPBOPBDB_00039 |
28853 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
39T>C |
Asn13Asn |
M0146794 |
MPBOPBDB_00039 |
28970 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
156A>G |
Thr52Thr |
M0146795 |
MPBOPBDB_00039 |
29072 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
258T>A |
Ala86Ala |
M0146796 |
MPBOPBDB_00033 |
29411 |
7 |
Gut |
0.23 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4149A>T |
None |
M0146797 |
MPBOPBDB_00033 |
29414 |
7 |
Gut |
0.23 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4152G>T |
None |
M0146798 |
MPBOPBDB_00041 |
29703 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
234T>A |
Ala78Ala |
M0146799 |
MPBOPBDB_00041 |
29763 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
294C>A |
Ile98Ile |
M0146800 |
MPBOPBDB_00041 |
29922 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
453A>G |
Lys151Lys |
M0146801 |
MPBOPBDB_00041 |
30081 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
612A>G |
Lys204Lys |
M0146802 |
MPBOPBDB_00041 |
30273 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
804A>C |
Ser268Ser |
M0146803 |
MPBOPBDB_00041 |
30411 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
942A>T |
Ile314Ile |
M0146804 |
MPBOPBDB_00041 |
30447 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
978G>A |
Ala326Ala |
M0146805 |
MPBOPBDB_00041 |
30498 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
1029A>G |
Glu343Glu |
M0146806 |
MPBOPBDB_00041 |
30528 |
10 |
Gut |
0.33 |
protein_coding |
synonymous_variant |
LOW |
1059G>A |
Glu353Glu |
M0146807 |
MPBOPBDB_00041 |
31266 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1797T>A |
Ser599Ser |
M0146808 |
MPBOPBDB_00043 |
32843 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
612A>C |
Val204Val |
M0146809 |
MPBOPBDB_00045 |
33556 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
327C>T |
Ser109Ser |
M0146810 |
MPBOPBDB_00045 |
33610 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
381A>T |
Ser127Ser |
M0146811 |
MPBOPBDB_00047 |
34942 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
96T>C |
Ile32Ile |
M0146812 |
MPBOPBDB_00048 |
35528 |
9 |
Gut |
0.30 |
protein_coding |
synonymous_variant |
LOW |
30G>A |
Lys10Lys |
M0146813 |
MPBOPBDB_00048 |
36347 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
849A>C |
Val283Val |
M0146814 |
MPBOPBDB_00048 |
36362 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
864C>T |
Ser288Ser |
M0146815 |
MPBOPBDB_00048 |
36392 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
894T>C |
Asp298Asp |
M0146816 |
MPBOPBDB_00048 |
36404 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
906G>A |
Gly302Gly |
M0146817 |
MPBOPBDB_00048 |
36405 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
907C>T |
Leu303Leu |
M0146818 |
MPBOPBDB_00048 |
36506 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
1008A>C |
Thr336Thr |
M0146819 |
MPBOPBDB_00048 |
36509 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
1011T>C |
Ser337Ser |
M0146820 |
MPBOPBDB_00048 |
36527 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1029A>C |
Val343Val |
M0146821 |
MPBOPBDB_00048 |
36539 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1041T>A |
Thr347Thr |
M0146822 |
MPBOPBDB_00048 |
36596 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1098G>A |
Lys366Lys |
M0146823 |
MPBOPBDB_00048 |
36674 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1176G>A |
Gln392Gln |
M0146824 |
MPBOPBDB_00048 |
36686 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1188T>A |
Ala396Ala |
M0146825 |
MPBOPBDB_00048 |
36689 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1191G>A |
Glu397Glu |
M0146826 |
MPBOPBDB_00048 |
36744 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
1246T>C |
Leu416Leu |
M0146827 |
MPBOPBDB_00050 |
36964 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
1G>T |
Val1Leu |
M0146828 |
MPBOPBDB_00050 |
37068 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
105A>G |
Val35Val |
M0146829 |
MPBOPBDB_00050 |
37263 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
300C>T |
Ser100Ser |
M0146830 |
MPBOPBDB_00050 |
37333 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
370A>G |
Met124Val |
M0146831 |
MPBOPBDB_00050 |
37680 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
717C>A |
Ser239Ser |
M0146832 |
MPBOPBDB_00050 |
37888 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
925C>T |
Leu309Leu |
M0146833 |
MPBOPBDB_00050 |
37890 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
927G>A |
Leu309Leu |
M0146834 |
MPBOPBDB_00050 |
37939 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
976C>T |
Leu326Leu |
M0146835 |
MPBOPBDB_00054 |
40223 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
531C>T |
Leu177Leu |
M0146836 |
MPBOPBDB_00054 |
40433 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
741A>T |
Val247Val |
M0146837 |
MPBOPBDB_00054 |
40715 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
1023A>G |
Lys341Lys |
M0146838 |
MPBOPBDB_00056 |
41784 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
528A>T |
Ser176Ser |
M0146839 |
MPBOPBDB_00056 |
41946 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
690G>A |
Arg230Arg |
M0146840 |
MPBOPBDB_00056 |
42033 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
777G>A |
Lys259Lys |
M0146841 |
MPBOPBDB_00056 |
42075 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
819T>G |
Leu273Leu |
M0146842 |
MPBOPBDB_00056 |
42081 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
825G>A |
Lys275Lys |
M0146843 |
MPBOPBDB_00056 |
42084 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
828T>C |
Asn276Asn |
M0146844 |
MPBOPBDB_00056 |
42085 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
829T>C |
Leu277Leu |
M0146845 |
MPBOPBDB_00056 |
42555 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1299G>A |
Lys433Lys |
M0146846 |
MPBOPBDB_00056 |
42780 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1524T>A |
Ile508Ile |
M0146847 |
MPBOPBDB_00056 |
42798 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1542A>G |
Glu514Glu |
M0146848 |
MPBOPBDB_00056 |
42828 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1572C>T |
His524His |
M0146849 |
MPBOPBDB_00056 |
42987 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1731G>A |
Glu577Glu |
M0146850 |
MPBOPBDB_00057 |
43545 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
327G>A |
Val109Val |
M0146851 |
MPBOPBDB_00023 |
18510 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
423G>T |
Pro141Pro |
M0146852 |
MPBOPBDB_00023 |
18513 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
420A>T |
Ala140Ala |
M0146853 |
MPBOPBDB_00023 |
18633 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
300T>C |
Ile100Ile |
M0146854 |
MPBOPBDB_00023 |
18654 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
279G>C |
Pro93Pro |
M0146855 |
MPBOPBDB_00023 |
18660 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
273T>C |
Phe91Phe |
M0146856 |
MPBOPBDB_00023 |
18752 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
181G>A |
Val61Ile |
M0146857 |
MPBOPBDB_00023 |
18753 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
180A>G |
Glu60Glu |
M0146858 |
MPBOPBDB_00023 |
18777 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
156G>T |
Gly52Gly |
M0146859 |
MPBOPBDB_00023 |
18801 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
132C>A |
Val44Val |
M0146860 |
MPBOPBDB_00024 |
19055 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
324A>G |
Glu108Glu |
M0146861 |
MPBOPBDB_00024 |
19079 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
300G>A |
Lys100Lys |
M0146862 |
MPBOPBDB_00024 |
19082 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
297G>T |
Leu99Leu |
M0146863 |
MPBOPBDB_00024 |
19091 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
288A>G |
Glu96Glu |
M0146864 |
MPBOPBDB_00025 |
19469 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
191G>T |
Arg64Ile |
M0146865 |
MPBOPBDB_00027 |
20437 |
6 |
Gut |
0.20 |
protein_coding |
missense_variant |
MODERATE |
34C>T |
Leu12Phe |
M0146866 |
MPBOPBDB_00028 |
20857 |
5 |
Gut |
0.17 |
protein_coding |
missense_variant |
MODERATE |
230A>G |
His77Arg |
M0146867 |
MPBOPBDB_00028 |
20889 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
198A>G |
Leu66Leu |
M0146868 |
MPBOPBDB_00029 |
21779 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
717T>C |
Ser239Ser |
M0146869 |
MPBOPBDB_00029 |
21927 |
6 |
Gut |
0.20 |
protein_coding |
missense_variant |
MODERATE |
569A>G |
His190Arg |
M0146870 |
MPBOPBDB_00029 |
21928 |
6 |
Gut |
0.20 |
protein_coding |
missense_variant |
MODERATE |
568C>A |
His190Asn |
M0146871 |
MPBOPBDB_00029 |
21968 |
6 |
Gut |
0.20 |
protein_coding |
synonymous_variant |
LOW |
528A>G |
Lys176Lys |
M0146872 |
MPBOPBDB_00029 |
22038 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
458A>C |
Glu153Ala |
M0146873 |
MPBOPBDB_00029 |
22238 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
258A>G |
Lys86Lys |
M0146874 |
MPBOPBDB_00030 |
22589 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
301A>C |
Met101Leu |
M0146875 |
MPBOPBDB_00030 |
22665 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
225C>T |
Thr75Thr |
M0146876 |
MPBOPBDB_00023 |
23103 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4171A>T |
None |
M0146877 |
MPBOPBDB_00023 |
23105 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4173G>A |
None |
M0146878 |
MPBOPBDB_00045 |
33280 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
51T>C |
Asp17Asp |
M0146879 |
MPBOPBDB_00045 |
33565 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
336T>C |
Leu112Leu |
M0146880 |
MPBOPBDB_00045 |
33661 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
432A>C |
Ala144Ala |
M0146881 |
MPBOPBDB_00047 |
34948 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
102C>T |
Cys34Cys |
M0146882 |
MPBOPBDB_00066 |
55503 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3853G>T |
None |
M0146883 |
MPBOPBDB_00071 |
56559 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
378T>C |
Phe126Phe |
M0146884 |
MPBOPBDB_00077 |
59820 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1092T>A |
Ala364Ala |
M0146885 |
MPBOPBDB_00077 |
59838 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1074T>C |
Asn358Asn |
M0146886 |
MPBOPBDB_00077 |
59992 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
920T>C |
Phe307Ser |
M0146887 |
MPBOPBDB_00077 |
60003 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
909T>C |
Asn303Asn |
M0146888 |
MPBOPBDB_00077 |
60300 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
612A>C |
Ser204Ser |
M0146889 |
MPBOPBDB_00077 |
60303 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
609T>C |
Asn203Asn |
M0146890 |
MPBOPBDB_00077 |
60342 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
570T>C |
Leu190Leu |
M0146891 |
MPBOPBDB_00077 |
60489 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
423T>C |
Gly141Gly |
M0146892 |
MPBOPBDB_00077 |
60504 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
408T>C |
Asp136Asp |
M0146893 |
MPBOPBDB_00077 |
60574 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
338T>A |
Leu113Gln |
M0146894 |
MPBOPBDB_00078 |
61126 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1218G>A |
Leu406Leu |
M0146895 |
MPBOPBDB_00078 |
61207 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1137T>C |
Pro379Pro |
M0146896 |
MPBOPBDB_00078 |
61414 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
930A>G |
Lys310Lys |
M0146897 |
MPBOPBDB_00078 |
61465 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
879T>C |
Asp293Asp |
M0146898 |
MPBOPBDB_00078 |
61522 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
822A>T |
Ser274Ser |
M0146899 |
MPBOPBDB_00078 |
61537 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
807C>G |
Thr269Thr |
M0146900 |
MPBOPBDB_00078 |
61543 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
801T>C |
Ile267Ile |
M0146901 |
MPBOPBDB_00078 |
61561 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
783C>T |
Asp261Asp |
M0146902 |
MPBOPBDB_00078 |
61717 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
627T>C |
Asp209Asp |
M0146903 |
MPBOPBDB_00078 |
61858 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
486T>C |
Tyr162Tyr |
M0146904 |
MPBOPBDB_00078 |
61912 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
432T>C |
Ser144Ser |
M0146905 |
MPBOPBDB_00078 |
62031 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
313T>G |
Ser105Ala |
M0146906 |
MPBOPBDB_00078 |
62110 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
234A>G |
Ser78Ser |
M0146907 |
MPBOPBDB_00078 |
62221 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
123G>A |
Lys41Lys |
M0146908 |
MPBOPBDB_00078 |
62315 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
29A>C |
Gln10Pro |
M0146909 |
MPBOPBDB_00078 |
62333 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
11T>C |
Ile4Thr |
M0146910 |
MPBOPBDB_00079 |
62376 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
804A>T |
Gly268Gly |
M0146911 |
MPBOPBDB_00080 |
63444 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
114A>G |
Gln38Gln |
M0146912 |
MPBOPBDB_00036 |
27909 |
7 |
Gut |
0.23 |
protein_coding |
synonymous_variant |
LOW |
285G>A |
Gln95Gln |
M0146913 |
MPBOPBDB_00036 |
28065 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
441T>A |
Val147Val |
M0146914 |
MPBOPBDB_00037 |
28284 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
67G>A |
Val23Ile |
M0146915 |
MPBOPBDB_00037 |
28388 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
171T>C |
Tyr57Tyr |
M0146916 |
MPBOPBDB_00040 |
29249 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
142C>T |
His48Tyr |
M0146917 |
MPBOPBDB_00041 |
30051 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
582G>A |
Leu194Leu |
M0146918 |
MPBOPBDB_00041 |
30870 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1401A>G |
Thr467Thr |
M0146919 |
MPBOPBDB_00041 |
31275 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1806T>C |
Gly602Gly |
M0146920 |
MPBOPBDB_00043 |
32828 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
597T>A |
Ile199Ile |
M0146921 |
MPBOPBDB_00045 |
33733 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
504C>T |
Asn168Asn |
M0146922 |
MPBOPBDB_00060 |
45562 |
8 |
Gut |
0.27 |
protein_coding |
synonymous_variant |
LOW |
372T>C |
Ser124Ser |
M0146923 |
MPBOPBDB_00059 |
46683 |
5 |
Gut |
0.17 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1466T>C |
None |
M0146924 |
MPBOPBDB_00026 |
19871 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
205G>T |
Val69Leu |
M0146925 |
MPBOPBDB_00026 |
20031 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
45T>C |
Gly15Gly |
M0146926 |
MPBOPBDB_00027 |
20417 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
54C>A |
Thr18Thr |
M0146927 |
MPBOPBDB_00021 |
20501 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3904C>T |
None |
M0146928 |
MPBOPBDB_00028 |
20694 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
393T>C |
Pro131Pro |
M0146929 |
MPBOPBDB_00028 |
20787 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
300G>A |
Lys100Lys |
M0146930 |
MPBOPBDB_00028 |
21013 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
74A>G |
Asn25Ser |
M0146931 |
MPBOPBDB_00028 |
21058 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
29A>G |
Tyr10Cys |
M0146932 |
MPBOPBDB_00028 |
21066 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
21C>A |
Phe7Leu |
M0146933 |
MPBOPBDB_00029 |
21179 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1317C>T |
Gly439Gly |
M0146934 |
MPBOPBDB_00029 |
21567 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
929A>G |
Asn310Ser |
M0146935 |
MPBOPBDB_00023 |
23002 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4070G>A |
None |
M0146936 |
MPBOPBDB_00022 |
17414 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
57A>C |
Leu19Phe |
M0146937 |
MPBOPBDB_00018 |
17504 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4166T>A |
None |
M0146938 |
MPBOPBDB_00023 |
18267 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
666C>A |
Val222Val |
M0146939 |
MPBOPBDB_00034 |
25433 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
116A>G |
Asn39Ser |
M0146940 |
MPBOPBDB_00034 |
25548 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
231T>C |
Phe77Phe |
M0146941 |
MPBOPBDB_00034 |
25773 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
456T>C |
Ile152Ile |
M0146942 |
MPBOPBDB_00034 |
25854 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
537C>T |
Ser179Ser |
M0146943 |
MPBOPBDB_00035 |
27192 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
417C>T |
Cys139Cys |
M0146944 |
MPBOPBDB_00029 |
27338 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4843A>G |
None |
M0146945 |
MPBOPBDB_00026 |
24883 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4808A>C |
None |
M0146946 |
MPBOPBDB_00026 |
24956 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4881A>G |
None |
M0146947 |
MPBOPBDB_00029 |
26556 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4061C>T |
None |
M0146948 |
MPBOPBDB_00035 |
27138 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
363T>C |
Phe121Phe |
M0146949 |
MPBOPBDB_00038 |
28539 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
110T>A |
Val37Glu |
M0146950 |
MPBOPBDB_00041 |
30582 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
1113T>C |
Leu371Leu |
M0146951 |
MPBOPBDB_00041 |
30675 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1206C>T |
Asn402Asn |
M0146952 |
MPBOPBDB_00041 |
30678 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1209A>G |
Ala403Ala |
M0146953 |
MPBOPBDB_00041 |
30681 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1212G>A |
Glu404Glu |
M0146954 |
MPBOPBDB_00041 |
30690 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1221T>C |
Asn407Asn |
M0146955 |
MPBOPBDB_00041 |
30693 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1224G>T |
Leu408Leu |
M0146956 |
MPBOPBDB_00041 |
30702 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1233G>A |
Thr411Thr |
M0146957 |
MPBOPBDB_00041 |
31185 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1716G>A |
Lys572Lys |
M0146958 |
MPBOPBDB_00041 |
31188 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1719C>A |
Ala573Ala |
M0146959 |
MPBOPBDB_00041 |
31227 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1758G>A |
Arg586Arg |
M0146960 |
MPBOPBDB_00048 |
35897 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
399G>A |
Ala133Ala |
M0146961 |
MPBOPBDB_00048 |
36395 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
897A>T |
Ala299Ala |
M0146962 |
MPBOPBDB_00048 |
36411 |
5 |
Gut |
0.17 |
protein_coding |
synonymous_variant |
LOW |
913T>C |
Leu305Leu |
M0146963 |
MPBOPBDB_00048 |
36416 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
918A>G |
Pro306Pro |
M0146964 |
MPBOPBDB_00048 |
36524 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1026T>A |
Ala342Ala |
M0146965 |
MPBOPBDB_00048 |
36698 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1200G>A |
Glu400Glu |
M0146966 |
MPBOPBDB_00050 |
37497 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
534C>T |
Ser178Ser |
M0146967 |
MPBOPBDB_00052 |
39176 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1056T>C |
Phe352Phe |
M0146968 |
MPBOPBDB_00052 |
39242 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1122G>A |
Ser374Ser |
M0146969 |
MPBOPBDB_00052 |
39428 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1308G>A |
Pro436Pro |
M0146970 |
MPBOPBDB_00054 |
40073 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
381G>A |
Lys127Lys |
M0146971 |
MPBOPBDB_00054 |
40076 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
384A>G |
Val128Val |
M0146972 |
MPBOPBDB_00059 |
44954 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
264G>A |
Gln88Gln |
M0146973 |
MPBOPBDB_00078 |
61558 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
786T>C |
Phe262Phe |
M0146974 |
MPBOPBDB_00078 |
61642 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
702T>A |
Ser234Ser |
M0146975 |
MPBOPBDB_00078 |
61900 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
444T>C |
Ser148Ser |
M0146976 |
MPBOPBDB_00078 |
62014 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
330C>T |
Ser110Ser |
M0146977 |
MPBOPBDB_00078 |
62086 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
258T>C |
Thr86Thr |
M0146978 |
MPBOPBDB_00078 |
62191 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
153T>C |
His51His |
M0146979 |
MPBOPBDB_00023 |
23078 |
4 |
Gut |
0.13 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4146A>G |
None |
M0146980 |
MPBOPBDB_00025 |
19405 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
255G>A |
Lys85Lys |
M0146981 |
MPBOPBDB_00025 |
19483 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
177T>C |
Val59Val |
M0146982 |
MPBOPBDB_00052 |
38447 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
327T>C |
Gly109Gly |
M0146983 |
MPBOPBDB_00054 |
40466 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
774T>C |
Leu258Leu |
M0146984 |
MPBOPBDB_00054 |
40562 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
870G>A |
Ser290Ser |
M0146985 |
MPBOPBDB_00056 |
43059 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
1803T>A |
Ile601Ile |
M0146986 |
MPBOPBDB_00038 |
28491 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
62C>A |
Thr21Asn |
M0146987 |
MPBOPBDB_00041 |
30390 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
921C>T |
Ile307Ile |
M0146988 |
MPBOPBDB_00041 |
30597 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
1128G>A |
Lys376Lys |
M0146989 |
MPBOPBDB_00058 |
44673 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
932G>A |
Arg311Gln |
M0146990 |
MPBOPBDB_00060 |
45563 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
371G>A |
Ser124Asn |
M0146991 |
MPBOPBDB_00060 |
45580 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
354A>G |
Gln118Gln |
M0146992 |
MPBOPBDB_00060 |
45670 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
264T>A |
Gly88Gly |
M0146993 |
MPBOPBDB_00060 |
45694 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
240C>T |
Phe80Phe |
M0146994 |
MPBOPBDB_00060 |
45834 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
100A>G |
Ile34Val |
M0146995 |
MPBOPBDB_00061 |
46122 |
4 |
Gut |
0.13 |
protein_coding |
missense_variant |
MODERATE |
404T>A |
Val135Glu |
M0146996 |
MPBOPBDB_00061 |
46220 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
306A>T |
Leu102Leu |
M0146997 |
MPBOPBDB_00061 |
46355 |
4 |
Gut |
0.13 |
protein_coding |
synonymous_variant |
LOW |
171T>C |
Ala57Ala |
M0146998 |
MPBOPBDB_00059 |
46862 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1645T>A |
None |
M0146999 |
MPBOPBDB_00059 |
46894 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1677A>T |
None |
M0147000 |
MPBOPBDB_00059 |
44937 |
3 |
Gut |
0.10 |
protein_coding |
missense_variant |
MODERATE |
281C>T |
Pro94Leu |
M0147001 |
MPBOPBDB_00059 |
45179 |
3 |
Gut |
0.10 |
protein_coding |
synonymous_variant |
LOW |
39T>C |
Gly13Gly |
M0147002 |
MPBOPBDB_00059 |
45229 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-12T>G |
None |
M0147003 |
MPBOPBDB_00059 |
45233 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-16T>G |
None |
M0147004 |
MPBOPBDB_00059 |
45234 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-17C>T |
None |
M0147005 |
MPBOPBDB_00059 |
45235 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-18A>T |
None |
M0147006 |
MPBOPBDB_00059 |
45332 |
3 |
Gut |
0.10 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-115A>T |
None |
Analysis of virulence factors contributing to bacterial pathogenicity
This table presents virulence factors identified within the plasmid cluster.
Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.
Gene Name |
vf_gene_id |
vf_name |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
vf_category |
gene_description |
condition |
Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact
This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.
Gene Name |
compound |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
group |
Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents
This table presents antimicrobial resistance genes identified within the plasmid cluster.
Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.
Gene Name |
aro_accession |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
drug_class |
amr_gene_family |
resistance_mechanism |
Analysis of pathogenicity genes to explore pathogen-host interactions
This table presents host pathogen-host interactions within the plasmid cluster.
Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.
Gene Name |
phi_molconn_id |
host gene_name |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
host_descripton |
disease_name |
function |
phenotype_of_mutant |
Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation
This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.
Gene Name |
cazy_id |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification
This table presents transport proteins within the plasmid cluster.
Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.
Gene Name |
tcid |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
class_field |
class_term |
subclass |
subclass_term |
family |
family_term |