Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2809
  Reference Plasmid   DP1806001380_bin.3__NODE_115_length_9949_cov_1.811675
  Reference Plasmid Size   9949
  Reference Plasmid GC Content   0.59
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0060937 MBJDPECA_00004 3883 59 Skin 0.26 protein_coding missense_variant MODERATE 500A>G Lys167Arg
M0060938 MBJDPECA_00004 4010 57 Skin 0.25 protein_coding missense_variant MODERATE 373G>A Ala125Thr
M0060939 MBJDPECA_00004 4236 40 Skin 0.17 protein_coding missense_variant MODERATE 147C>A Asp49Glu
M0060940 MBJDPECA_00005 5120 57 Skin 0.25 protein_coding missense_variant MODERATE 11G>T Arg4Met
M0060941 MBJDPECA_00005 5994 48 Skin 0.21 protein_coding synonymous_variant LOW 885G>A Thr295Thr
M0060942 MBJDPECA_00005 6000 3 Skin 0.01 protein_coding synonymous_variant LOW 891A>G Thr297Thr
M0060943 MBJDPECA_00003 2164 63 Skin 0.27 protein_coding synonymous_variant LOW 891A>T Gly297Gly
M0060944 MBJDPECA_00003 2334 74 Skin 0.32 protein_coding missense_variant MODERATE 721A>G Ser241Gly
M0060945 MBJDPECA_00003 2452 75 Skin 0.32 protein_coding synonymous_variant LOW 603T>C Ile201Ile
M0060946 MBJDPECA_00003 2551 72 Skin 0.31 protein_coding synonymous_variant LOW 504C>A Arg168Arg
M0060947 MBJDPECA_00003 2572 72 Skin 0.31 protein_coding synonymous_variant LOW 483A>G Leu161Leu
M0060948 MBJDPECA_00003 2590 35 Skin 0.15 protein_coding synonymous_variant LOW 465T>C Leu155Leu
M0060949 MBJDPECA_00003 2803 86 Skin 0.37 protein_coding synonymous_variant LOW 252A>G Gly84Gly
M0060950 MBJDPECA_00003 2956 71 Skin 0.31 protein_coding synonymous_variant LOW 99T>C Asp33Asp
M0060951 MBJDPECA_00003 2970 71 Skin 0.31 protein_coding missense_variant MODERATE 85T>C Ser29Pro
M0060952 MBJDPECA_00003 2981 70 Skin 0.30 protein_coding missense_variant MODERATE 74C>T Ser25Leu
M0060953 MBJDPECA_00004 3123 76 Skin 0.33 protein_coding synonymous_variant LOW 1260C>T Cys420Cys
M0060954 MBJDPECA_00004 3411 77 Skin 0.33 protein_coding synonymous_variant LOW 972A>C Thr324Thr
M0060955 MBJDPECA_00004 3537 76 Skin 0.33 protein_coding synonymous_variant LOW 846A>G Glu282Glu
M0060956 MBJDPECA_00004 3566 81 Skin 0.35 protein_coding missense_variant MODERATE 817A>G Ile273Val
M0060957 MBJDPECA_00004 3894 79 Skin 0.34 protein_coding synonymous_variant LOW 489T>C Ile163Ile
M0060958 MBJDPECA_00004 4009 85 Skin 0.37 protein_coding missense_variant MODERATE 374C>T Ala125Val
M0060959 MBJDPECA_00004 4020 82 Skin 0.35 protein_coding synonymous_variant LOW 363C>T Ile121Ile
M0060960 MBJDPECA_00004 4091 80 Skin 0.35 protein_coding missense_variant MODERATE 292C>T Leu98Phe
M0060961 MBJDPECA_00004 4210 81 Skin 0.35 protein_coding missense_variant MODERATE 173T>C Val58Ala
M0060962 MBJDPECA_00004 4225 81 Skin 0.35 protein_coding missense_variant MODERATE 158C>G Thr53Ser
M0060963 MBJDPECA_00004 4257 80 Skin 0.35 protein_coding missense_variant MODERATE 126G>A Met42Ile
M0060964 MBJDPECA_00001 4398 78 Skin 0.34 protein_coding upstream_gene_variant MODIFIER -3285G>A None
M0060965 MBJDPECA_00001 4535 38 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -3422C>T None
M0060966 MBJDPECA_00001 4540 37 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -3427T>A None
M0060967 MBJDPECA_00001 4615 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3502G>T None
M0060968 MBJDPECA_00001 4619 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3506G>T None
M0060969 MBJDPECA_00001 4636 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3523C>T None
M0060970 MBJDPECA_00001 4644 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3531C>T None
M0060971 MBJDPECA_00001 4658 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3545C>T None
M0060972 MBJDPECA_00001 4660 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3547T>C None
M0060973 MBJDPECA_00001 4668 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3555T>C None
M0060974 MBJDPECA_00001 4688 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3575C>T None
M0060975 MBJDPECA_00001 4692 72 Skin 0.31 protein_coding upstream_gene_variant MODIFIER -3579C>T None
M0060976 MBJDPECA_00001 4697 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3584C>T None
M0060977 MBJDPECA_00001 4908 66 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -3795C>T None
M0060978 MBJDPECA_00001 4961 80 Skin 0.35 protein_coding upstream_gene_variant MODIFIER -3848A>G None
M0060979 MBJDPECA_00001 4973 65 Skin 0.28 protein_coding upstream_gene_variant MODIFIER -3860G>A None
M0060980 MBJDPECA_00001 4981 23 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3868T>C None
M0060981 MBJDPECA_00001 4984 66 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -3871C>T None
M0060982 MBJDPECA_00005 5383 69 Skin 0.30 protein_coding missense_variant MODERATE 274G>A Asp92Asn
M0060983 MBJDPECA_00005 5413 62 Skin 0.27 protein_coding missense_variant MODERATE 304G>C Glu102Gln
M0060984 MBJDPECA_00005 5418 63 Skin 0.27 protein_coding synonymous_variant LOW 309C>T Asp103Asp
M0060985 MBJDPECA_00005 5562 70 Skin 0.30 protein_coding synonymous_variant LOW 453A>G Ala151Ala
M0060986 MBJDPECA_00005 5643 70 Skin 0.30 protein_coding synonymous_variant LOW 534T>C Ala178Ala
M0060987 MBJDPECA_00005 5776 66 Skin 0.29 protein_coding missense_variant MODERATE 667G>A Val223Ile
M0060988 MBJDPECA_00005 5868 63 Skin 0.27 protein_coding synonymous_variant LOW 759C>A Ser253Ser
M0060989 MBJDPECA_00006 6529 27 Skin 0.12 protein_coding synonymous_variant LOW 165A>G Leu55Leu
M0060990 MBJDPECA_00007 6926 21 Skin 0.09 protein_coding missense_variant MODERATE 763G>T Ala255Ser
M0060991 MBJDPECA_00007 7054 44 Skin 0.19 protein_coding missense_variant MODERATE 635C>T Ala212Val
M0060992 MBJDPECA_00004 8221 13 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3839C>T None
M0060993 MBJDPECA_00009 8499 26 Skin 0.11 protein_coding missense_variant MODERATE 199A>G Asn67Asp
M0060994 MBJDPECA_00004 3345 38 Skin 0.16 protein_coding synonymous_variant LOW 1038T>C Ser346Ser
M0060995 MBJDPECA_00004 3935 43 Skin 0.19 protein_coding missense_variant MODERATE 448T>C Phe150Leu
M0060996 MBJDPECA_00001 4701 32 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -3588C>T None
M0060997 MBJDPECA_00001 4990 36 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -3877A>G None
M0060998 MBJDPECA_00001 5083 59 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3970C>T None
M0060999 MBJDPECA_00005 5166 62 Skin 0.27 protein_coding synonymous_variant LOW 57T>C Ala19Ala
M0061000 MBJDPECA_00005 5257 67 Skin 0.29 protein_coding synonymous_variant LOW 148T>C Leu50Leu
M0061001 MBJDPECA_00005 5475 62 Skin 0.27 protein_coding synonymous_variant LOW 366A>G Ser122Ser
M0061002 MBJDPECA_00005 5481 62 Skin 0.27 protein_coding synonymous_variant LOW 372A>G Gln124Gln
M0061003 MBJDPECA_00005 5586 69 Skin 0.30 protein_coding synonymous_variant LOW 477A>G Ala159Ala
M0061004 MBJDPECA_00005 5642 25 Skin 0.11 protein_coding missense_variant MODERATE 533C>T Ala178Val
M0061005 MBJDPECA_00002 1569 22 Skin 0.10 protein_coding missense_variant MODERATE 260T>C Val87Ala
M0061006 MBJDPECA_00001 2083 53 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -970C>T None
M0061007 MBJDPECA_00001 2104 53 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -991C>T None
M0061008 MBJDPECA_00001 2117 53 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -1004C>T None
M0061009 MBJDPECA_00005 5922 40 Skin 0.17 protein_coding synonymous_variant LOW 813A>G Glu271Glu
M0061010 MBJDPECA_00005 5931 40 Skin 0.17 protein_coding synonymous_variant LOW 822A>G Gln274Gln
M0061011 MBJDPECA_00005 5933 40 Skin 0.17 protein_coding missense_variant MODERATE 824A>G Gln275Arg
M0061012 MBJDPECA_00005 5937 40 Skin 0.17 protein_coding synonymous_variant LOW 828G>A Gly276Gly
M0061013 MBJDPECA_00005 5940 40 Skin 0.17 protein_coding synonymous_variant LOW 831C>T His277His
M0061014 MBJDPECA_00005 5964 40 Skin 0.17 protein_coding synonymous_variant LOW 855C>T Ile285Ile
M0061015 MBJDPECA_00005 5971 40 Skin 0.17 protein_coding missense_variant MODERATE 862C>A Leu288Ile
M0061016 MBJDPECA_00005 5976 40 Skin 0.17 protein_coding synonymous_variant LOW 867T>C Ser289Ser
M0061017 MBJDPECA_00005 5988 22 Skin 0.10 protein_coding synonymous_variant LOW 879G>A Thr293Thr
M0061018 MBJDPECA_00005 5991 14 Skin 0.06 protein_coding synonymous_variant LOW 882G>A Pro294Pro
M0061019 MBJDPECA_00001 697 17 Skin 0.07 protein_coding synonymous_variant LOW 417C>T Gly139Gly
M0061020 MBJDPECA_00001 736 31 Skin 0.13 protein_coding synonymous_variant LOW 378T>C Thr126Thr
M0061021 MBJDPECA_00001 775 30 Skin 0.13 protein_coding synonymous_variant LOW 339A>G Ser113Ser
M0061022 MBJDPECA_00001 798 30 Skin 0.13 protein_coding missense_variant MODERATE 316G>A Asp106Asn
M0061023 MBJDPECA_00001 802 30 Skin 0.13 protein_coding synonymous_variant LOW 312T>C Asn104Asn
M0061024 MBJDPECA_00001 823 29 Skin 0.13 protein_coding synonymous_variant LOW 291A>G Ser97Ser
M0061025 MBJDPECA_00001 844 29 Skin 0.13 protein_coding synonymous_variant LOW 270T>G Leu90Leu
M0061026 MBJDPECA_00001 856 29 Skin 0.13 protein_coding synonymous_variant LOW 258G>A Val86Val
M0061027 MBJDPECA_00001 874 29 Skin 0.13 protein_coding synonymous_variant LOW 240A>G Pro80Pro
M0061028 MBJDPECA_00001 910 29 Skin 0.13 protein_coding synonymous_variant LOW 204C>T Val68Val
M0061029 MBJDPECA_00001 940 30 Skin 0.13 protein_coding synonymous_variant LOW 174T>G Leu58Leu
M0061030 MBJDPECA_00001 949 30 Skin 0.13 protein_coding synonymous_variant LOW 165C>T Asn55Asn
M0061031 MBJDPECA_00001 967 30 Skin 0.13 protein_coding synonymous_variant LOW 147C>T Phe49Phe
M0061032 MBJDPECA_00001 998 31 Skin 0.13 protein_coding missense_variant MODERATE 116T>C Val39Ala
M0061033 MBJDPECA_00001 1066 33 Skin 0.14 protein_coding synonymous_variant LOW 48G>A Ala16Ala
M0061034 MBJDPECA_00001 1093 33 Skin 0.14 protein_coding synonymous_variant LOW 21T>C Val7Val
M0061035 MBJDPECA_00001 1137 32 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -24G>A None
M0061036 MBJDPECA_00001 1138 32 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -25C>G None
M0061037 MBJDPECA_00001 1151 32 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -38G>A None
M0061038 MBJDPECA_00001 1209 31 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -96T>C None
M0061039 MBJDPECA_00002 1318 35 Skin 0.15 protein_coding synonymous_variant LOW 9C>G Ala3Ala
M0061040 MBJDPECA_00002 1355 35 Skin 0.15 protein_coding missense_variant MODERATE 46A>G Thr16Ala
M0061041 MBJDPECA_00002 1420 34 Skin 0.15 protein_coding synonymous_variant LOW 111A>G Gly37Gly
M0061042 MBJDPECA_00002 1423 34 Skin 0.15 protein_coding synonymous_variant LOW 114T>C Arg38Arg
M0061043 MBJDPECA_00002 1538 42 Skin 0.18 protein_coding missense_variant MODERATE 229A>G Thr77Ala
M0061044 MBJDPECA_00002 1552 42 Skin 0.18 protein_coding missense_variant MODERATE 243A>C Gln81His
M0061045 MBJDPECA_00002 1555 42 Skin 0.18 protein_coding synonymous_variant LOW 246A>G Leu82Leu
M0061046 MBJDPECA_00002 1598 45 Skin 0.19 protein_coding missense_variant MODERATE 289A>G Thr97Ala
M0061047 MBJDPECA_00002 1617 45 Skin 0.19 protein_coding missense_variant MODERATE 308G>C Gly103Ala
M0061048 MBJDPECA_00002 1624 45 Skin 0.19 protein_coding synonymous_variant LOW 315G>A Gln105Gln
M0061049 MBJDPECA_00002 1645 45 Skin 0.19 protein_coding synonymous_variant LOW 336A>C Arg112Arg
M0061050 MBJDPECA_00002 1649 45 Skin 0.19 protein_coding synonymous_variant LOW 340T>C Leu114Leu
M0061051 MBJDPECA_00002 1654 45 Skin 0.19 protein_coding synonymous_variant LOW 345G>A Glu115Glu
M0061052 MBJDPECA_00002 1664 45 Skin 0.19 protein_coding missense_variant MODERATE 355A>G Ile119Val
M0061053 MBJDPECA_00002 1699 46 Skin 0.20 protein_coding synonymous_variant LOW 390A>C Pro130Pro
M0061054 MBJDPECA_00002 1705 46 Skin 0.20 protein_coding synonymous_variant LOW 396A>G Leu132Leu
M0061055 MBJDPECA_00002 1738 47 Skin 0.20 protein_coding synonymous_variant LOW 429C>T Asn143Asn
M0061056 MBJDPECA_00002 1795 46 Skin 0.20 protein_coding synonymous_variant LOW 486A>G Lys162Lys
M0061057 MBJDPECA_00002 1798 46 Skin 0.20 protein_coding synonymous_variant LOW 489T>C Tyr163Tyr
M0061058 MBJDPECA_00002 1844 49 Skin 0.21 protein_coding missense_variant MODERATE 535A>G Ile179Val
M0061059 MBJDPECA_00002 1864 49 Skin 0.21 protein_coding synonymous_variant LOW 555C>T Ile185Ile
M0061060 MBJDPECA_00002 1894 53 Skin 0.23 protein_coding synonymous_variant LOW 585G>A Gln195Gln
M0061061 MBJDPECA_00002 1939 51 Skin 0.22 protein_coding missense_variant MODERATE 630A>C Glu210Asp
M0061062 MBJDPECA_00002 1948 51 Skin 0.22 protein_coding synonymous_variant LOW 639C>T Arg213Arg
M0061063 MBJDPECA_00002 1981 54 Skin 0.23 protein_coding synonymous_variant LOW 672C>T Ala224Ala
M0061064 MBJDPECA_00002 1994 54 Skin 0.23 protein_coding missense_variant MODERATE 685G>C Ala229Pro
M0061065 MBJDPECA_00001 4632 4 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3519C>T None
M0061066 MBJDPECA_00001 4739 3 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3626T>C None
M0061067 MBJDPECA_00001 4741 3 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3628T>C None
M0061068 MBJDPECA_00001 4989 9 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -3876A>G None
M0061069 MBJDPECA_00001 5079 31 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3966C>A None
M0061070 MBJDPECA_00005 6068 27 Skin 0.12 protein_coding missense_variant MODERATE 959A>T Asp320Val
M0061071 MBJDPECA_00005 6070 27 Skin 0.12 protein_coding missense_variant MODERATE 961C>G His321Asp
M0061072 MBJDPECA_00005 6129 26 Skin 0.11 protein_coding synonymous_variant LOW 1020C>T Asp340Asp
M0061073 MBJDPECA_00005 6259 26 Skin 0.11 protein_coding missense_variant MODERATE 1150G>A Asp384Asn
M0061074 MBJDPECA_00005 6265 27 Skin 0.12 protein_coding missense_variant MODERATE 1156G>A Val386Ile
M0061075 MBJDPECA_00005 6291 25 Skin 0.11 protein_coding synonymous_variant LOW 1182G>C Pro394Pro
M0061076 MBJDPECA_00005 6307 26 Skin 0.11 protein_coding missense_variant MODERATE 1198G>C Glu400Gln
M0061077 MBJDPECA_00005 6309 26 Skin 0.11 protein_coding synonymous_variant LOW 1200A>G Glu400Glu
M0061078 MBJDPECA_00005 6347 24 Skin 0.10 protein_coding missense_variant MODERATE 1238A>G Asn413Ser
M0061079 MBJDPECA_00006 6562 16 Skin 0.07 protein_coding synonymous_variant LOW 132C>T Arg44Arg
M0061080 MBJDPECA_00006 6691 16 Skin 0.07 protein_coding start_lost HIGH 3G>A Met1?
M0061081 MBJDPECA_00007 6738 16 Skin 0.07 protein_coding synonymous_variant LOW 951A>G Ala317Ala
M0061082 MBJDPECA_00007 6749 16 Skin 0.07 protein_coding synonymous_variant LOW 940T>C Leu314Leu
M0061083 MBJDPECA_00007 6750 16 Skin 0.07 protein_coding synonymous_variant LOW 939A>G Val313Val
M0061084 MBJDPECA_00007 6755 16 Skin 0.07 protein_coding missense_variant MODERATE 934A>G Thr312Ala
M0061085 MBJDPECA_00007 6765 15 Skin 0.06 protein_coding synonymous_variant LOW 924G>A Leu308Leu
M0061086 MBJDPECA_00007 6786 16 Skin 0.07 protein_coding synonymous_variant LOW 903G>T Gly301Gly
M0061087 MBJDPECA_00007 6790 17 Skin 0.07 protein_coding missense_variant MODERATE 899G>T Trp300Leu
M0061088 MBJDPECA_00007 6822 16 Skin 0.07 protein_coding synonymous_variant LOW 867C>T Val289Val
M0061089 MBJDPECA_00007 6827 16 Skin 0.07 protein_coding missense_variant MODERATE 862C>T Leu288Phe
M0061090 MBJDPECA_00007 6831 16 Skin 0.07 protein_coding synonymous_variant LOW 858C>G Pro286Pro
M0061091 MBJDPECA_00007 6864 14 Skin 0.06 protein_coding synonymous_variant LOW 825A>G Lys275Lys
M0061092 MBJDPECA_00007 6879 14 Skin 0.06 protein_coding synonymous_variant LOW 810T>C Asn270Asn
M0061093 MBJDPECA_00007 6897 15 Skin 0.06 protein_coding synonymous_variant LOW 792T>C Ile264Ile
M0061094 MBJDPECA_00007 6927 16 Skin 0.07 protein_coding synonymous_variant LOW 762C>G Val254Val
M0061095 MBJDPECA_00007 6945 16 Skin 0.07 protein_coding synonymous_variant LOW 744T>C Asp248Asp
M0061096 MBJDPECA_00007 7043 15 Skin 0.06 protein_coding missense_variant MODERATE 646A>T Ser216Cys
M0061097 MBJDPECA_00007 7071 15 Skin 0.06 protein_coding synonymous_variant LOW 618C>T Leu206Leu
M0061098 MBJDPECA_00007 7271 18 Skin 0.08 protein_coding missense_variant MODERATE 418A>G Ile140Val
M0061099 MBJDPECA_00007 7338 16 Skin 0.07 protein_coding synonymous_variant LOW 351T>C Ser117Ser
M0061100 MBJDPECA_00007 7354 16 Skin 0.07 protein_coding missense_variant MODERATE 335C>G Ala112Gly
M0061101 MBJDPECA_00007 7431 15 Skin 0.06 protein_coding synonymous_variant LOW 258T>C Thr86Thr
M0061102 MBJDPECA_00007 7461 13 Skin 0.06 protein_coding synonymous_variant LOW 228C>T Thr76Thr
M0061103 MBJDPECA_00007 7479 14 Skin 0.06 protein_coding synonymous_variant LOW 210C>T Gly70Gly
M0061104 MBJDPECA_00007 7554 15 Skin 0.06 protein_coding synonymous_variant LOW 135T>C Asp45Asp
M0061105 MBJDPECA_00007 7569 14 Skin 0.06 protein_coding synonymous_variant LOW 120C>T Asp40Asp
M0061106 MBJDPECA_00008 7759 11 Skin 0.05 protein_coding missense_variant MODERATE 439A>G Thr147Ala
M0061107 MBJDPECA_00008 7842 11 Skin 0.05 protein_coding missense_variant MODERATE 356A>G Asp119Gly
M0061108 MBJDPECA_00008 8048 8 Skin 0.03 protein_coding synonymous_variant LOW 150G>T Thr50Thr
M0061109 MBJDPECA_00008 8095 8 Skin 0.03 protein_coding missense_variant MODERATE 103G>A Gly35Arg
M0061110 MBJDPECA_00008 8100 8 Skin 0.03 protein_coding missense_variant MODERATE 98C>T Pro33Leu
M0061111 MBJDPECA_00008 8120 5 Skin 0.02 protein_coding synonymous_variant LOW 78T>G Ala26Ala
M0061112 MBJDPECA_00004 8202 8 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3820C>T None
M0061113 MBJDPECA_00009 8285 9 Skin 0.04 protein_coding missense_variant MODERATE 413A>G Glu138Gly
M0061114 MBJDPECA_00001 4490 3 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3377C>G None
M0061115 MBJDPECA_00005 5384 22 Skin 0.10 protein_coding missense_variant MODERATE 275A>G Asp92Gly
M0061116 MBJDPECA_00004 3272 5 Skin 0.02 protein_coding missense_variant MODERATE 1111G>A Val371Met
M0061117 MBJDPECA_00001 5035 8 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3922T>G None
M0061118 MBJDPECA_00005 6051 4 Skin 0.02 protein_coding synonymous_variant LOW 942G>A Pro314Pro
M0061119 MBJDPECA_00001 4838 5 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3725T>C None
M0061120 MBJDPECA_00009 8625 11 Skin 0.05 protein_coding missense_variant MODERATE 73A>G Ser25Gly
M0061121 MBJDPECA_00005 5121 3 Skin 0.01 protein_coding missense_variant MODERATE 12G>T Arg4Ser
M0061122 MBJDPECA_00011 9390 5 Skin 0.02 protein_coding synonymous_variant LOW 535T>C Leu179Leu
M0061123 MBJDPECA_00011 9405 5 Skin 0.02 protein_coding missense_variant MODERATE 520G>A Asp174Asn
M0061124 MBJDPECA_00011 9425 6 Skin 0.03 protein_coding missense_variant MODERATE 500G>T Arg167Leu
M0061125 MBJDPECA_00011 9438 6 Skin 0.03 protein_coding missense_variant MODERATE 487T>C Trp163Arg
M0061126 MBJDPECA_00011 9446 5 Skin 0.02 protein_coding missense_variant MODERATE 479C>T Ala160Val
M0061127 MBJDPECA_00011 9462 5 Skin 0.02 protein_coding missense_variant MODERATE 463C>T Leu155Phe
M0061128 MBJDPECA_00011 9489 5 Skin 0.02 protein_coding missense_variant MODERATE 436T>C Ser146Pro
M0061129 MBJDPECA_00011 9519 5 Skin 0.02 protein_coding missense_variant MODERATE 406G>A Glu136Lys
M0061130 MBJDPECA_00011 9525 5 Skin 0.02 protein_coding missense_variant MODERATE 400A>G Arg134Gly
M0061131 MBJDPECA_00002 1354 15 Skin 0.06 protein_coding synonymous_variant LOW 45C>T Gly15Gly
M0061132 MBJDPECA_00002 1935 3 Skin 0.01 protein_coding missense_variant MODERATE 626C>A Ala209Asp
M0061133 MBJDPECA_00002 1602 5 Skin 0.02 protein_coding stop_gained HIGH 293C>A Ser98*
M0061134 MBJDPECA_00001 2144 4 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -1031A>G None
M0061135 MBJDPECA_00005 5253 3 Skin 0.01 protein_coding synonymous_variant LOW 144G>A Val48Val
M0061136 MBJDPECA_00009 8634 6 Skin 0.03 protein_coding synonymous_variant LOW 64C>T Leu22Leu
M0061137 MBJDPECA_00009 8657 6 Skin 0.03 protein_coding missense_variant MODERATE 41A>G Asp14Gly
M0061138 MBJDPECA_00010 8880 5 Skin 0.02 protein_coding missense_variant MODERATE 97A>G Ile33Val
M0061139 MBJDPECA_00011 9129 5 Skin 0.02 protein_coding missense_variant MODERATE 796G>A Asp266Asn
M0061140 MBJDPECA_00011 9285 5 Skin 0.02 protein_coding missense_variant MODERATE 640T>C Phe214Leu
M0061141 MBJDPECA_00011 9299 5 Skin 0.02 protein_coding missense_variant MODERATE 626T>C Leu209Ser
M0061142 MBJDPECA_00011 9321 5 Skin 0.02 protein_coding missense_variant MODERATE 604G>A Glu202Lys
M0061143 MBJDPECA_00011 9666 4 Skin 0.02 protein_coding missense_variant MODERATE 259G>A Gly87Ser
M0061144 MBJDPECA_00011 9722 3 Skin 0.01 protein_coding missense_variant MODERATE 203T>C Leu68Pro
M0061145 MBJDPECA_00011 9763 4 Skin 0.02 protein_coding synonymous_variant LOW 162A>G Ala54Ala
M0061146 MBJDPECA_00011 9764 4 Skin 0.02 protein_coding missense_variant MODERATE 161C>T Ala54Val
M0061147 MBJDPECA_00011 9831 4 Skin 0.02 protein_coding missense_variant MODERATE 94A>G Arg32Gly
M0061148 MBJDPECA_00011 9847 4 Skin 0.02 protein_coding synonymous_variant LOW 78T>C Ile26Ile
M0061149 MBJDPECA_00011 9894 4 Skin 0.02 protein_coding missense_variant MODERATE 31G>T Ala11Ser
M0061150 MBJDPECA_00001 4979 5 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3866A>G None
M0061151 MBJDPECA_00002 1676 17 Skin 0.07 protein_coding missense_variant MODERATE 367G>T Asp123Tyr
M0061152 MBJDPECA_00001 2084 20 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -971C>T None
M0061153 MBJDPECA_00001 4594 7 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3481C>T None
M0061154 MBJDPECA_00001 1267 6 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -154C>T None
M0061155 MBJDPECA_00002 1840 10 Skin 0.04 protein_coding synonymous_variant LOW 531C>G Arg177Arg
M0061156 MBJDPECA_00001 4557 7 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3444G>A None
M0061157 MBJDPECA_00011 9215 4 Skin 0.02 protein_coding missense_variant MODERATE 710A>C Gln237Pro
M0061158 MBJDPECA_00011 9228 4 Skin 0.02 protein_coding missense_variant MODERATE 697G>A Val233Ile
M0061159 MBJDPECA_00011 9251 4 Skin 0.02 protein_coding missense_variant MODERATE 674T>A Leu225His
M0061160 MBJDPECA_00011 9260 4 Skin 0.02 protein_coding missense_variant MODERATE 665T>C Phe222Ser
M0061161 MBJDPECA_00004 3339 4 Skin 0.02 protein_coding synonymous_variant LOW 1044C>T Val348Val
M0061162 MBJDPECA_00005 5985 11 Skin 0.05 protein_coding synonymous_variant LOW 876G>A Pro292Pro
M0061163 MBJDPECA_00005 6034 3 Skin 0.01 protein_coding missense_variant MODERATE 925A>G Thr309Ala
M0061164 MBJDPECA_00005 6036 3 Skin 0.01 protein_coding synonymous_variant LOW 927A>C Thr309Thr
M0061165 MBJDPECA_00005 6015 3 Skin 0.01 protein_coding synonymous_variant LOW 906G>A Pro302Pro
M0061166 MBJDPECA_00005 6018 4 Skin 0.02 protein_coding synonymous_variant LOW 909A>C Thr303Thr
M0061167 MBJDPECA_00001 4567 3 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3454C>T None
M0061168 MBJDPECA_00001 4399 6 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3286A>G None
M0061169 MBJDPECA_00001 4571 3 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3458T>G None
M0061170 MBJDPECA_00005 5917 5 Skin 0.02 protein_coding missense_variant MODERATE 808C>T Leu270Phe
M0061171 MBJDPECA_00007 6729 5 Skin 0.02 protein_coding synonymous_variant LOW 960C>A Val320Val
M0061172 MBJDPECA_00003 2657 3 Skin 0.01 protein_coding missense_variant MODERATE 398A>G Tyr133Cys






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term