Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C2815
  Reference Plasmid   DP1806001471_bin.2__NODE_55_length_12027_cov_6.698524
  Reference Plasmid Size   12027
  Reference Plasmid GC Content   0.61
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0061624 PCEHIHHK_00005 6382 70 Skin 0.61 protein_coding missense_variant MODERATE 1371C>G Asp457Glu
M0061625 PCEHIHHK_00005 6634 21 Skin 0.18 protein_coding synonymous_variant LOW 1623T>C Thr541Thr
M0061626 PCEHIHHK_00005 7520 23 Skin 0.20 protein_coding missense_variant MODERATE 2509G>A Val837Ile
M0061627 PCEHIHHK_00007 9078 20 Skin 0.17 protein_coding synonymous_variant LOW 594C>T Asp198Asp
M0061628 PCEHIHHK_00007 9090 20 Skin 0.17 protein_coding synonymous_variant LOW 582G>T Pro194Pro
M0061629 PCEHIHHK_00009 10793 13 Skin 0.11 protein_coding synonymous_variant LOW 114A>G Glu38Glu
M0061630 PCEHIHHK_00009 10805 15 Skin 0.13 protein_coding synonymous_variant LOW 126G>A Lys42Lys
M0061631 PCEHIHHK_00009 10820 15 Skin 0.13 protein_coding synonymous_variant LOW 141A>G Pro47Pro
M0061632 PCEHIHHK_00001 536 3 Skin 0.03 protein_coding synonymous_variant LOW 444A>G Gln148Gln
M0061633 PCEHIHHK_00001 548 3 Skin 0.03 protein_coding synonymous_variant LOW 456T>C Pro152Pro
M0061634 PCEHIHHK_00001 572 3 Skin 0.03 protein_coding synonymous_variant LOW 480A>G Leu160Leu
M0061635 PCEHIHHK_00001 840 3 Skin 0.03 protein_coding synonymous_variant LOW 748C>T Leu250Leu
M0061636 PCEHIHHK_00001 893 3 Skin 0.03 protein_coding synonymous_variant LOW 801C>T Ile267Ile
M0061637 PCEHIHHK_00001 1115 3 Skin 0.03 protein_coding synonymous_variant LOW 1023C>T Asp341Asp
M0061638 PCEHIHHK_00001 1133 3 Skin 0.03 protein_coding synonymous_variant LOW 1041T>C Ser347Ser
M0061639 PCEHIHHK_00001 1163 6 Skin 0.05 protein_coding synonymous_variant LOW 1071C>T Arg357Arg
M0061640 PCEHIHHK_00001 1178 3 Skin 0.03 protein_coding synonymous_variant LOW 1086G>C Gly362Gly
M0061641 PCEHIHHK_00001 1217 3 Skin 0.03 protein_coding synonymous_variant LOW 1125G>A Glu375Glu
M0061642 PCEHIHHK_00001 1220 4 Skin 0.03 protein_coding synonymous_variant LOW 1128A>G Val376Val
M0061643 PCEHIHHK_00001 1260 3 Skin 0.03 protein_coding missense_variant MODERATE 1168A>C Asn390His
M0061644 PCEHIHHK_00001 1262 3 Skin 0.03 protein_coding missense_variant MODERATE 1170T>G Asn390Lys
M0061645 PCEHIHHK_00001 1295 4 Skin 0.03 protein_coding synonymous_variant LOW 1203T>C Leu401Leu
M0061646 PCEHIHHK_00001 1308 3 Skin 0.03 protein_coding missense_variant MODERATE 1216G>T Ala406Ser
M0061647 PCEHIHHK_00001 1347 4 Skin 0.03 protein_coding missense_variant MODERATE 1255G>A Ala419Thr
M0061648 PCEHIHHK_00001 1348 3 Skin 0.03 protein_coding missense_variant MODERATE 1256C>T Ala419Val
M0061649 PCEHIHHK_00001 1362 3 Skin 0.03 protein_coding missense_variant MODERATE 1270A>G Thr424Ala
M0061650 PCEHIHHK_00001 1370 4 Skin 0.03 protein_coding synonymous_variant LOW 1278A>G Gln426Gln
M0061651 PCEHIHHK_00001 1400 4 Skin 0.03 protein_coding synonymous_variant LOW 1308T>C Ile436Ile
M0061652 PCEHIHHK_00001 1440 3 Skin 0.03 protein_coding missense_variant MODERATE 1348T>C Ser450Pro
M0061653 PCEHIHHK_00001 1457 33 Skin 0.29 protein_coding missense_variant MODERATE 1365A>C Lys455Asn
M0061654 PCEHIHHK_00002 1500 4 Skin 0.03 protein_coding missense_variant MODERATE 1391A>G His464Arg
M0061655 PCEHIHHK_00002 1538 3 Skin 0.03 protein_coding synonymous_variant LOW 1353A>G Gly451Gly
M0061656 PCEHIHHK_00002 1568 3 Skin 0.03 protein_coding synonymous_variant LOW 1323G>C Gly441Gly
M0061657 PCEHIHHK_00002 1583 4 Skin 0.03 protein_coding synonymous_variant LOW 1308A>G Gln436Gln
M0061658 PCEHIHHK_00002 1592 4 Skin 0.03 protein_coding synonymous_variant LOW 1299A>T Val433Val
M0061659 PCEHIHHK_00002 1613 4 Skin 0.03 protein_coding synonymous_variant LOW 1278G>A Leu426Leu
M0061660 PCEHIHHK_00002 1690 6 Skin 0.05 protein_coding missense_variant MODERATE 1201C>A Pro401Thr
M0061661 PCEHIHHK_00002 1727 9 Skin 0.08 protein_coding missense_variant MODERATE 1164C>G His388Gln
M0061662 PCEHIHHK_00002 1865 9 Skin 0.08 protein_coding synonymous_variant LOW 1026T>C Val342Val
M0061663 PCEHIHHK_00002 2000 8 Skin 0.07 protein_coding missense_variant MODERATE 891G>C Leu297Phe
M0061664 PCEHIHHK_00002 2010 8 Skin 0.07 protein_coding missense_variant MODERATE 881T>C Val294Ala
M0061665 PCEHIHHK_00002 2087 8 Skin 0.07 protein_coding synonymous_variant LOW 804T>A Pro268Pro
M0061666 PCEHIHHK_00002 2117 10 Skin 0.09 protein_coding synonymous_variant LOW 774T>C Gly258Gly
M0061667 PCEHIHHK_00002 2237 8 Skin 0.07 protein_coding synonymous_variant LOW 654C>T Ala218Ala
M0061668 PCEHIHHK_00002 2240 8 Skin 0.07 protein_coding synonymous_variant LOW 651C>T Val217Val
M0061669 PCEHIHHK_00002 2365 10 Skin 0.09 protein_coding missense_variant MODERATE 526A>G Thr176Ala
M0061670 PCEHIHHK_00002 2495 8 Skin 0.07 protein_coding synonymous_variant LOW 396C>T Ala132Ala
M0061671 PCEHIHHK_00002 2558 10 Skin 0.09 protein_coding synonymous_variant LOW 333C>T Val111Val
M0061672 PCEHIHHK_00002 2606 9 Skin 0.08 protein_coding synonymous_variant LOW 285C>T Gly95Gly
M0061673 PCEHIHHK_00002 2666 11 Skin 0.10 protein_coding synonymous_variant LOW 225G>A Glu75Glu
M0061674 PCEHIHHK_00002 2717 12 Skin 0.10 protein_coding synonymous_variant LOW 174G>A Ala58Ala
M0061675 PCEHIHHK_00002 2819 10 Skin 0.09 protein_coding synonymous_variant LOW 72T>C Gly24Gly
M0061676 PCEHIHHK_00002 2828 8 Skin 0.07 protein_coding synonymous_variant LOW 63C>T Arg21Arg
M0061677 PCEHIHHK_00002 2855 9 Skin 0.08 protein_coding synonymous_variant LOW 36C>T Ser12Ser
M0061678 PCEHIHHK_00002 2862 9 Skin 0.08 protein_coding missense_variant MODERATE 29C>A Ala10Glu
M0061679 PCEHIHHK_00002 2909 7 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -19A>G None
M0061680 PCEHIHHK_00002 2941 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -51G>A None
M0061681 PCEHIHHK_00002 2946 10 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -56C>T None
M0061682 PCEHIHHK_00002 2982 12 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -92C>T None
M0061683 PCEHIHHK_00002 3034 11 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -144G>A None
M0061684 PCEHIHHK_00002 3148 14 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -258T>C None
M0061685 PCEHIHHK_00002 3180 15 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -290T>C None
M0061686 PCEHIHHK_00003 3242 40 Skin 0.35 protein_coding stop_lost&splice_region_variant HIGH 256T>C Ter86Argext*?
M0061687 PCEHIHHK_00003 3273 13 Skin 0.11 protein_coding synonymous_variant LOW 225A>G Arg75Arg
M0061688 PCEHIHHK_00003 3321 11 Skin 0.10 protein_coding synonymous_variant LOW 177C>T Asp59Asp
M0061689 PCEHIHHK_00003 3330 8 Skin 0.07 protein_coding synonymous_variant LOW 168C>T Asp56Asp
M0061690 PCEHIHHK_00003 3351 11 Skin 0.10 protein_coding synonymous_variant LOW 147T>C Leu49Leu
M0061691 PCEHIHHK_00003 3438 9 Skin 0.08 protein_coding stop_gained HIGH 60G>A Trp20*
M0061692 PCEHIHHK_00002 3578 8 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -688T>C None
M0061693 PCEHIHHK_00002 3599 8 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -709G>A None
M0061694 PCEHIHHK_00002 3616 8 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -726T>G None
M0061695 PCEHIHHK_00002 3770 13 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -880G>A None
M0061696 PCEHIHHK_00002 3802 7 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -912C>T None
M0061697 PCEHIHHK_00004 3947 14 Skin 0.12 protein_coding synonymous_variant LOW 117A>G Val39Val
M0061698 PCEHIHHK_00004 4153 18 Skin 0.16 protein_coding missense_variant MODERATE 323A>G Gln108Arg
M0061699 PCEHIHHK_00004 4156 15 Skin 0.13 protein_coding missense_variant MODERATE 326G>A Arg109His
M0061700 PCEHIHHK_00004 4206 20 Skin 0.17 protein_coding missense_variant MODERATE 376G>A Ala126Thr
M0061701 PCEHIHHK_00004 4216 8 Skin 0.07 protein_coding missense_variant MODERATE 386A>C Asn129Thr
M0061702 PCEHIHHK_00004 4480 16 Skin 0.14 protein_coding missense_variant MODERATE 650G>A Arg217His
M0061703 PCEHIHHK_00004 4586 13 Skin 0.11 protein_coding synonymous_variant LOW 756G>A Thr252Thr
M0061704 PCEHIHHK_00004 4593 10 Skin 0.09 protein_coding missense_variant MODERATE 763G>A Val255Ile
M0061705 PCEHIHHK_00004 4742 9 Skin 0.08 protein_coding synonymous_variant LOW 912G>A Lys304Lys
M0061706 PCEHIHHK_00004 4757 9 Skin 0.08 protein_coding synonymous_variant LOW 927G>A Glu309Glu
M0061707 PCEHIHHK_00004 4799 8 Skin 0.07 protein_coding synonymous_variant LOW 969G>A Pro323Pro
M0061708 PCEHIHHK_00004 4807 13 Skin 0.11 protein_coding missense_variant MODERATE 977C>A Thr326Asn
M0061709 PCEHIHHK_00005 5199 14 Skin 0.12 protein_coding missense_variant MODERATE 188T>C Ile63Thr
M0061710 PCEHIHHK_00005 5482 8 Skin 0.07 protein_coding synonymous_variant LOW 471T>C Ala157Ala
M0061711 PCEHIHHK_00005 5640 12 Skin 0.10 protein_coding missense_variant MODERATE 629A>G Asn210Ser
M0061712 PCEHIHHK_00005 5650 12 Skin 0.10 protein_coding synonymous_variant LOW 639A>G Lys213Lys
M0061713 PCEHIHHK_00005 5713 16 Skin 0.14 protein_coding synonymous_variant LOW 702A>G Gln234Gln
M0061714 PCEHIHHK_00005 5731 11 Skin 0.10 protein_coding synonymous_variant LOW 720C>T Thr240Thr
M0061715 PCEHIHHK_00005 5750 17 Skin 0.15 protein_coding missense_variant MODERATE 739A>T Thr247Ser
M0061716 PCEHIHHK_00005 5816 16 Skin 0.14 protein_coding missense_variant MODERATE 805A>G Thr269Ala
M0061717 PCEHIHHK_00005 5818 10 Skin 0.09 protein_coding synonymous_variant LOW 807C>T Thr269Thr
M0061718 PCEHIHHK_00004 4951 7 Skin 0.06 protein_coding missense_variant MODERATE 1121G>A Arg374His
M0061719 PCEHIHHK_00004 4680 12 Skin 0.10 protein_coding missense_variant MODERATE 850A>G Asn284Asp
M0061720 PCEHIHHK_00005 6212 18 Skin 0.16 protein_coding missense_variant MODERATE 1201G>A Glu401Lys
M0061721 PCEHIHHK_00005 6269 11 Skin 0.10 protein_coding synonymous_variant LOW 1258T>C Leu420Leu
M0061722 PCEHIHHK_00005 6301 19 Skin 0.17 protein_coding synonymous_variant LOW 1290G>A Ser430Ser
M0061723 PCEHIHHK_00005 6341 17 Skin 0.15 protein_coding missense_variant MODERATE 1330A>G Thr444Ala
M0061724 PCEHIHHK_00005 6349 17 Skin 0.15 protein_coding synonymous_variant LOW 1338T>C Asn446Asn
M0061725 PCEHIHHK_00005 6362 17 Skin 0.15 protein_coding missense_variant MODERATE 1351C>G His451Asp
M0061726 PCEHIHHK_00005 6366 18 Skin 0.16 protein_coding missense_variant MODERATE 1355G>A Gly452Asp
M0061727 PCEHIHHK_00005 6400 11 Skin 0.10 protein_coding synonymous_variant LOW 1389A>G Arg463Arg
M0061728 PCEHIHHK_00005 6406 17 Skin 0.15 protein_coding synonymous_variant LOW 1395A>G Arg465Arg
M0061729 PCEHIHHK_00005 6418 17 Skin 0.15 protein_coding synonymous_variant LOW 1407T>C Thr469Thr
M0061730 PCEHIHHK_00005 6439 17 Skin 0.15 protein_coding synonymous_variant LOW 1428G>A Gly476Gly
M0061731 PCEHIHHK_00005 6450 17 Skin 0.15 protein_coding missense_variant MODERATE 1439A>T Glu480Val
M0061732 PCEHIHHK_00005 6464 17 Skin 0.15 protein_coding missense_variant MODERATE 1453A>G Thr485Ala
M0061733 PCEHIHHK_00005 6465 11 Skin 0.10 protein_coding missense_variant MODERATE 1454C>A Thr485Asn
M0061734 PCEHIHHK_00005 6469 17 Skin 0.15 protein_coding synonymous_variant LOW 1458G>A Val486Val
M0061735 PCEHIHHK_00005 6482 11 Skin 0.10 protein_coding missense_variant MODERATE 1471G>A Glu491Lys
M0061736 PCEHIHHK_00005 6488 13 Skin 0.11 protein_coding synonymous_variant LOW 1477T>C Leu493Leu
M0061737 PCEHIHHK_00005 6497 17 Skin 0.15 protein_coding missense_variant MODERATE 1486G>A Ala496Thr
M0061738 PCEHIHHK_00005 6537 14 Skin 0.12 protein_coding missense_variant MODERATE 1526G>A Arg509Lys
M0061739 PCEHIHHK_00005 6583 13 Skin 0.11 protein_coding synonymous_variant LOW 1572A>G Glu524Glu
M0061740 PCEHIHHK_00005 6593 13 Skin 0.11 protein_coding missense_variant MODERATE 1582G>A Glu528Lys
M0061741 PCEHIHHK_00005 6618 12 Skin 0.10 protein_coding missense_variant MODERATE 1607C>T Ala536Val
M0061742 PCEHIHHK_00005 6650 18 Skin 0.16 protein_coding missense_variant MODERATE 1639A>G Ile547Val
M0061743 PCEHIHHK_00005 6682 12 Skin 0.10 protein_coding synonymous_variant LOW 1671A>G Glu557Glu
M0061744 PCEHIHHK_00005 6740 13 Skin 0.11 protein_coding synonymous_variant LOW 1729T>C Leu577Leu
M0061745 PCEHIHHK_00005 6764 12 Skin 0.10 protein_coding missense_variant MODERATE 1753G>A Val585Ile
M0061746 PCEHIHHK_00005 6835 14 Skin 0.12 protein_coding synonymous_variant LOW 1824T>C Leu608Leu
M0061747 PCEHIHHK_00005 6868 13 Skin 0.11 protein_coding synonymous_variant LOW 1857C>T Thr619Thr
M0061748 PCEHIHHK_00005 6875 13 Skin 0.11 protein_coding missense_variant MODERATE 1864G>A Glu622Lys
M0061749 PCEHIHHK_00005 6877 14 Skin 0.12 protein_coding synonymous_variant LOW 1866G>A Glu622Glu
M0061750 PCEHIHHK_00005 6899 13 Skin 0.11 protein_coding missense_variant MODERATE 1888A>G Thr630Ala
M0061751 PCEHIHHK_00005 6949 16 Skin 0.14 protein_coding missense_variant MODERATE 1938G>C Gln646His
M0061752 PCEHIHHK_00005 6989 9 Skin 0.08 protein_coding missense_variant MODERATE 1978G>A Glu660Lys
M0061753 PCEHIHHK_00005 7003 17 Skin 0.15 protein_coding synonymous_variant LOW 1992A>G Thr664Thr
M0061754 PCEHIHHK_00005 7005 17 Skin 0.15 protein_coding missense_variant MODERATE 1994G>A Arg665Gln
M0061755 PCEHIHHK_00005 7026 23 Skin 0.20 protein_coding missense_variant MODERATE 2015G>C Arg672Thr
M0061756 PCEHIHHK_00005 7041 17 Skin 0.15 protein_coding missense_variant MODERATE 2030A>G Asn677Ser
M0061757 PCEHIHHK_00005 7084 14 Skin 0.12 protein_coding synonymous_variant LOW 2073G>A Gly691Gly
M0061758 PCEHIHHK_00005 7126 15 Skin 0.13 protein_coding synonymous_variant LOW 2115C>T Thr705Thr
M0061759 PCEHIHHK_00005 7208 27 Skin 0.23 protein_coding missense_variant MODERATE 2197G>T Ala733Ser
M0061760 PCEHIHHK_00005 7209 19 Skin 0.17 protein_coding missense_variant MODERATE 2198C>T Ala733Val
M0061761 PCEHIHHK_00005 7222 19 Skin 0.17 protein_coding missense_variant MODERATE 2211A>C Glu737Asp
M0061762 PCEHIHHK_00005 7288 28 Skin 0.24 protein_coding synonymous_variant LOW 2277C>T Phe759Phe
M0061763 PCEHIHHK_00005 7297 28 Skin 0.24 protein_coding missense_variant MODERATE 2286G>T Glu762Asp
M0061764 PCEHIHHK_00005 7330 29 Skin 0.25 protein_coding synonymous_variant LOW 2319C>T Val773Val
M0061765 PCEHIHHK_00005 7342 29 Skin 0.25 protein_coding synonymous_variant LOW 2331G>A Gln777Gln
M0061766 PCEHIHHK_00005 7345 29 Skin 0.25 protein_coding synonymous_variant LOW 2334T>C Leu778Leu
M0061767 PCEHIHHK_00005 7357 20 Skin 0.17 protein_coding synonymous_variant LOW 2346G>A Arg782Arg
M0061768 PCEHIHHK_00005 7435 19 Skin 0.17 protein_coding synonymous_variant LOW 2424T>C Ile808Ile
M0061769 PCEHIHHK_00005 7450 19 Skin 0.17 protein_coding synonymous_variant LOW 2439A>G Gly813Gly
M0061770 PCEHIHHK_00005 7459 19 Skin 0.17 protein_coding synonymous_variant LOW 2448G>A Val816Val
M0061771 PCEHIHHK_00005 7471 19 Skin 0.17 protein_coding synonymous_variant LOW 2460C>T Asp820Asp
M0061772 PCEHIHHK_00005 7474 19 Skin 0.17 protein_coding synonymous_variant LOW 2463C>T Ala821Ala
M0061773 PCEHIHHK_00005 7492 19 Skin 0.17 protein_coding synonymous_variant LOW 2481T>C Pro827Pro
M0061774 PCEHIHHK_00005 7516 19 Skin 0.17 protein_coding synonymous_variant LOW 2505C>T Ala835Ala
M0061775 PCEHIHHK_00005 7529 19 Skin 0.17 protein_coding missense_variant MODERATE 2518A>G Ser840Gly
M0061776 PCEHIHHK_00005 7534 19 Skin 0.17 protein_coding synonymous_variant LOW 2523T>C Ala841Ala
M0061777 PCEHIHHK_00005 7556 17 Skin 0.15 protein_coding missense_variant MODERATE 2545T>C Phe849Leu
M0061778 PCEHIHHK_00002 7621 23 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -4731A>G None
M0061779 PCEHIHHK_00002 7623 15 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4733C>T None
M0061780 PCEHIHHK_00002 7626 26 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -4736T>C None
M0061781 PCEHIHHK_00002 7631 15 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4741G>A None
M0061782 PCEHIHHK_00002 7637 15 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4747T>C None
M0061783 PCEHIHHK_00002 7641 15 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4751G>A None
M0061784 PCEHIHHK_00002 7650 16 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4760T>G None
M0061785 PCEHIHHK_00002 7652 16 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4762G>T None
M0061786 PCEHIHHK_00002 7658 16 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4768A>G None
M0061787 PCEHIHHK_00006 7725 17 Skin 0.15 protein_coding synonymous_variant LOW 1300C>T Leu434Leu
M0061788 PCEHIHHK_00006 7882 18 Skin 0.16 protein_coding synonymous_variant LOW 1143C>T Gly381Gly
M0061789 PCEHIHHK_00006 8020 21 Skin 0.18 protein_coding synonymous_variant LOW 1005T>C Phe335Phe
M0061790 PCEHIHHK_00006 8127 20 Skin 0.17 protein_coding missense_variant MODERATE 898G>T Ala300Ser
M0061791 PCEHIHHK_00006 8299 21 Skin 0.18 protein_coding synonymous_variant LOW 726C>T Ile242Ile
M0061792 PCEHIHHK_00006 8428 18 Skin 0.16 protein_coding missense_variant MODERATE 597A>G Ile199Met
M0061793 PCEHIHHK_00006 8701 23 Skin 0.20 protein_coding synonymous_variant LOW 324A>G Leu108Leu
M0061794 PCEHIHHK_00006 9012 18 Skin 0.16 protein_coding missense_variant MODERATE 13A>G Ser5Gly
M0061795 PCEHIHHK_00007 9189 19 Skin 0.17 protein_coding synonymous_variant LOW 483C>T Asp161Asp
M0061796 PCEHIHHK_00007 9226 21 Skin 0.18 protein_coding missense_variant MODERATE 446A>G Gln149Arg
M0061797 PCEHIHHK_00007 9300 18 Skin 0.16 protein_coding synonymous_variant LOW 372C>T Arg124Arg
M0061798 PCEHIHHK_00007 9386 15 Skin 0.13 protein_coding missense_variant MODERATE 286G>A Val96Met
M0061799 PCEHIHHK_00007 9444 16 Skin 0.14 protein_coding synonymous_variant LOW 228G>A Gln76Gln
M0061800 PCEHIHHK_00006 9702 17 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -678A>G None
M0061801 PCEHIHHK_00006 9704 16 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -680A>G None
M0061802 PCEHIHHK_00006 9736 17 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -712T>G None
M0061803 PCEHIHHK_00006 9770 15 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -746G>A None
M0061804 PCEHIHHK_00008 9918 17 Skin 0.15 protein_coding synonymous_variant LOW 111C>T Val37Val
M0061805 PCEHIHHK_00008 10410 14 Skin 0.12 protein_coding synonymous_variant LOW 603G>A Ala201Ala
M0061806 PCEHIHHK_00008 10420 16 Skin 0.14 protein_coding missense_variant MODERATE 613G>A Gly205Arg
M0061807 PCEHIHHK_00008 10489 6 Skin 0.05 protein_coding missense_variant MODERATE 682G>A Ala228Thr
M0061808 PCEHIHHK_00008 10640 17 Skin 0.15 protein_coding missense_variant MODERATE 833T>C Met278Thr
M0061809 PCEHIHHK_00009 10928 11 Skin 0.10 protein_coding synonymous_variant LOW 249C>T Ala83Ala
M0061810 PCEHIHHK_00009 11006 11 Skin 0.10 protein_coding synonymous_variant LOW 327T>G Ser109Ser
M0061811 PCEHIHHK_00009 11009 11 Skin 0.10 protein_coding synonymous_variant LOW 330C>T Pro110Pro
M0061812 PCEHIHHK_00009 11114 9 Skin 0.08 protein_coding synonymous_variant LOW 435A>G Ser145Ser
M0061813 PCEHIHHK_00009 11117 6 Skin 0.05 protein_coding synonymous_variant LOW 438A>G Pro146Pro
M0061814 PCEHIHHK_00006 11174 7 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -2150T>C None
M0061815 PCEHIHHK_00010 11211 6 Skin 0.05 protein_coding synonymous_variant LOW 369G>T Pro123Pro
M0061816 PCEHIHHK_00010 11214 6 Skin 0.05 protein_coding synonymous_variant LOW 366A>C Leu122Leu
M0061817 PCEHIHHK_00010 11226 8 Skin 0.07 protein_coding synonymous_variant LOW 354G>C Gly118Gly
M0061818 PCEHIHHK_00010 11281 6 Skin 0.05 protein_coding missense_variant MODERATE 299G>A Ser100Asn
M0061819 PCEHIHHK_00010 11307 8 Skin 0.07 protein_coding synonymous_variant LOW 273T>C Val91Val
M0061820 PCEHIHHK_00010 11346 5 Skin 0.04 protein_coding synonymous_variant LOW 234C>T Val78Val
M0061821 PCEHIHHK_00010 11353 5 Skin 0.04 protein_coding missense_variant MODERATE 227C>T Ser76Leu
M0061822 PCEHIHHK_00010 11361 5 Skin 0.04 protein_coding synonymous_variant LOW 219T>C Gly73Gly
M0061823 PCEHIHHK_00010 11367 5 Skin 0.04 protein_coding synonymous_variant LOW 213C>T Arg71Arg
M0061824 PCEHIHHK_00010 11370 5 Skin 0.04 protein_coding synonymous_variant LOW 210G>A Lys70Lys
M0061825 PCEHIHHK_00010 11379 5 Skin 0.04 protein_coding synonymous_variant LOW 201C>G Val67Val
M0061826 PCEHIHHK_00010 11403 5 Skin 0.04 protein_coding synonymous_variant LOW 177T>G Ala59Ala
M0061827 PCEHIHHK_00006 8539 21 Skin 0.18 protein_coding synonymous_variant LOW 486T>C Phe162Phe
M0061828 PCEHIHHK_00006 8569 22 Skin 0.19 protein_coding synonymous_variant LOW 456C>G Thr152Thr
M0061829 PCEHIHHK_00006 8590 21 Skin 0.18 protein_coding synonymous_variant LOW 435G>A Gly145Gly
M0061830 PCEHIHHK_00006 8596 22 Skin 0.19 protein_coding synonymous_variant LOW 429A>T Gly143Gly
M0061831 PCEHIHHK_00006 8599 22 Skin 0.19 protein_coding synonymous_variant LOW 426T>C Thr142Thr
M0061832 PCEHIHHK_00006 8629 22 Skin 0.19 protein_coding synonymous_variant LOW 396G>A Ala132Ala
M0061833 PCEHIHHK_00006 8638 21 Skin 0.18 protein_coding synonymous_variant LOW 387C>T Gly129Gly
M0061834 PCEHIHHK_00006 8662 21 Skin 0.18 protein_coding synonymous_variant LOW 363G>A Val121Val
M0061835 PCEHIHHK_00006 8505 4 Skin 0.03 protein_coding missense_variant MODERATE 520G>A Val174Ile
M0061836 PCEHIHHK_00007 9449 3 Skin 0.03 protein_coding missense_variant MODERATE 223G>A Asp75Asn
M0061837 PCEHIHHK_00008 10214 7 Skin 0.06 protein_coding missense_variant MODERATE 407T>C Val136Ala
M0061838 PCEHIHHK_00005 5234 7 Skin 0.06 protein_coding missense_variant MODERATE 223G>A Val75Ile
M0061839 PCEHIHHK_00002 3811 6 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -921G>A None
M0061840 PCEHIHHK_00005 5862 7 Skin 0.06 protein_coding missense_variant MODERATE 851A>G Lys284Arg
M0061841 PCEHIHHK_00005 5865 7 Skin 0.06 protein_coding missense_variant MODERATE 854G>C Arg285Thr
M0061842 PCEHIHHK_00005 6317 5 Skin 0.04 protein_coding missense_variant MODERATE 1306G>A Ala436Thr
M0061843 PCEHIHHK_00005 6547 5 Skin 0.04 protein_coding synonymous_variant LOW 1536G>A Glu512Glu
M0061844 PCEHIHHK_00005 6659 5 Skin 0.04 protein_coding missense_variant MODERATE 1648G>A Ala550Thr
M0061845 PCEHIHHK_00005 6690 5 Skin 0.04 protein_coding missense_variant MODERATE 1679T>C Val560Ala
M0061846 PCEHIHHK_00005 6700 5 Skin 0.04 protein_coding synonymous_variant LOW 1689G>A Ala563Ala
M0061847 PCEHIHHK_00005 6729 5 Skin 0.04 protein_coding missense_variant MODERATE 1718C>T Ala573Val
M0061848 PCEHIHHK_00005 6840 6 Skin 0.05 protein_coding missense_variant MODERATE 1829C>T Thr610Ile
M0061849 PCEHIHHK_00005 6878 6 Skin 0.05 protein_coding missense_variant MODERATE 1867G>A Ala623Thr
M0061850 PCEHIHHK_00005 6955 6 Skin 0.05 protein_coding synonymous_variant LOW 1944G>A Ala648Ala
M0061851 PCEHIHHK_00005 6961 7 Skin 0.06 protein_coding synonymous_variant LOW 1950G>A Ala650Ala
M0061852 PCEHIHHK_00005 7214 7 Skin 0.06 protein_coding missense_variant MODERATE 2203C>T His735Tyr
M0061853 PCEHIHHK_00005 7246 8 Skin 0.07 protein_coding synonymous_variant LOW 2235A>G Ala745Ala
M0061854 PCEHIHHK_00005 7309 8 Skin 0.07 protein_coding synonymous_variant LOW 2298G>A Glu766Glu
M0061855 PCEHIHHK_00002 7634 7 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4744A>G None
M0061856 PCEHIHHK_00002 7647 7 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4757C>T None
M0061857 PCEHIHHK_00006 7714 7 Skin 0.06 protein_coding synonymous_variant LOW 1311T>C Arg437Arg
M0061858 PCEHIHHK_00006 8893 6 Skin 0.05 protein_coding synonymous_variant LOW 132C>T Val44Val
M0061859 PCEHIHHK_00007 9659 4 Skin 0.03 protein_coding missense_variant MODERATE 13C>T His5Tyr
M0061860 PCEHIHHK_00008 10522 3 Skin 0.03 protein_coding missense_variant MODERATE 715C>T Arg239Trp
M0061861 PCEHIHHK_00002 3155 6 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -265C>T None
M0061862 PCEHIHHK_00001 1448 5 Skin 0.04 protein_coding synonymous_variant LOW 1356A>G Lys452Lys
M0061863 PCEHIHHK_00002 1509 4 Skin 0.03 protein_coding missense_variant MODERATE 1382G>A Ser461Asn
M0061864 PCEHIHHK_00002 2895 4 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -5C>T None
M0061865 PCEHIHHK_00002 3089 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -199C>T None
M0061866 PCEHIHHK_00004 4622 5 Skin 0.04 protein_coding synonymous_variant LOW 792T>C Ser264Ser
M0061867 PCEHIHHK_00001 317 3 Skin 0.03 protein_coding synonymous_variant LOW 225A>G Pro75Pro
M0061868 PCEHIHHK_00008 10252 4 Skin 0.03 protein_coding missense_variant MODERATE 445G>A Ala149Thr
M0061869 PCEHIHHK_00002 3830 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -940G>A None
M0061870 PCEHIHHK_00004 3911 3 Skin 0.03 protein_coding synonymous_variant LOW 81A>G Pro27Pro
M0061871 PCEHIHHK_00004 4064 3 Skin 0.03 protein_coding missense_variant MODERATE 234A>G Ile78Met
M0061872 PCEHIHHK_00004 4181 3 Skin 0.03 protein_coding synonymous_variant LOW 351A>G Leu117Leu
M0061873 PCEHIHHK_00004 4198 3 Skin 0.03 protein_coding missense_variant MODERATE 368C>T Thr123Ile
M0061874 PCEHIHHK_00004 4262 3 Skin 0.03 protein_coding synonymous_variant LOW 432C>T Arg144Arg
M0061875 PCEHIHHK_00004 4271 3 Skin 0.03 protein_coding synonymous_variant LOW 441A>G Ser147Ser
M0061876 PCEHIHHK_00004 4274 3 Skin 0.03 protein_coding synonymous_variant LOW 444T>C Thr148Thr
M0061877 PCEHIHHK_00004 4403 4 Skin 0.03 protein_coding missense_variant MODERATE 573G>C Glu191Asp
M0061878 PCEHIHHK_00004 4406 4 Skin 0.03 protein_coding synonymous_variant LOW 576C>T Asp192Asp
M0061879 PCEHIHHK_00004 4418 4 Skin 0.03 protein_coding synonymous_variant LOW 588A>G Arg196Arg
M0061880 PCEHIHHK_00004 4430 4 Skin 0.03 protein_coding synonymous_variant LOW 600C>T Ser200Ser
M0061881 PCEHIHHK_00004 4433 4 Skin 0.03 protein_coding synonymous_variant LOW 603C>T Tyr201Tyr
M0061882 PCEHIHHK_00004 4535 4 Skin 0.03 protein_coding synonymous_variant LOW 705C>T Ser235Ser
M0061883 PCEHIHHK_00004 4605 4 Skin 0.03 protein_coding synonymous_variant LOW 775C>T Leu259Leu
M0061884 PCEHIHHK_00004 4721 4 Skin 0.03 protein_coding synonymous_variant LOW 891A>C Gly297Gly
M0061885 PCEHIHHK_00004 4769 4 Skin 0.03 protein_coding synonymous_variant LOW 939T>C Asp313Asp
M0061886 PCEHIHHK_00004 4793 5 Skin 0.04 protein_coding synonymous_variant LOW 963C>T Leu321Leu
M0061887 PCEHIHHK_00004 4839 4 Skin 0.03 protein_coding missense_variant MODERATE 1009A>G Ile337Val
M0061888 PCEHIHHK_00004 4868 4 Skin 0.03 protein_coding synonymous_variant LOW 1038T>C Gly346Gly
M0061889 PCEHIHHK_00004 4915 4 Skin 0.03 protein_coding missense_variant MODERATE 1085A>G Asn362Ser
M0061890 PCEHIHHK_00004 4969 4 Skin 0.03 protein_coding missense_variant MODERATE 1139G>A Gly380Glu
M0061891 PCEHIHHK_00004 4972 4 Skin 0.03 protein_coding missense_variant MODERATE 1142C>T Ala381Val
M0061892 PCEHIHHK_00004 4974 4 Skin 0.03 protein_coding missense_variant MODERATE 1144A>G Ser382Gly
M0061893 PCEHIHHK_00004 4978 5 Skin 0.04 protein_coding missense_variant MODERATE 1148T>C Ile383Thr
M0061894 PCEHIHHK_00004 4983 4 Skin 0.03 protein_coding missense_variant MODERATE 1153T>A Ser385Thr
M0061895 PCEHIHHK_00004 5006 4 Skin 0.03 protein_coding synonymous_variant LOW 1176G>A Val392Val
M0061896 PCEHIHHK_00005 5152 3 Skin 0.03 protein_coding synonymous_variant LOW 141G>C Leu47Leu
M0061897 PCEHIHHK_00005 5162 5 Skin 0.04 protein_coding missense_variant MODERATE 151A>G Ser51Gly
M0061898 PCEHIHHK_00005 5182 5 Skin 0.04 protein_coding synonymous_variant LOW 171G>A Lys57Lys
M0061899 PCEHIHHK_00005 5185 5 Skin 0.04 protein_coding synonymous_variant LOW 174T>C Ser58Ser
M0061900 PCEHIHHK_00005 5265 4 Skin 0.03 protein_coding missense_variant MODERATE 254G>A Arg85His
M0061901 PCEHIHHK_00005 5281 6 Skin 0.05 protein_coding synonymous_variant LOW 270G>A Lys90Lys
M0061902 PCEHIHHK_00005 5293 6 Skin 0.05 protein_coding synonymous_variant LOW 282A>G Lys94Lys
M0061903 PCEHIHHK_00005 5302 6 Skin 0.05 protein_coding synonymous_variant LOW 291A>G Glu97Glu
M0061904 PCEHIHHK_00005 5314 6 Skin 0.05 protein_coding synonymous_variant LOW 303G>A Lys101Lys
M0061905 PCEHIHHK_00005 5350 5 Skin 0.04 protein_coding synonymous_variant LOW 339T>C Thr113Thr
M0061906 PCEHIHHK_00005 5389 3 Skin 0.03 protein_coding synonymous_variant LOW 378C>T Ser126Ser
M0061907 PCEHIHHK_00005 5393 5 Skin 0.04 protein_coding missense_variant MODERATE 382A>G Thr128Ala
M0061908 PCEHIHHK_00005 5446 5 Skin 0.04 protein_coding synonymous_variant LOW 435T>C Ser145Ser
M0061909 PCEHIHHK_00005 5476 5 Skin 0.04 protein_coding synonymous_variant LOW 465T>C Leu155Leu
M0061910 PCEHIHHK_00005 5488 5 Skin 0.04 protein_coding synonymous_variant LOW 477A>G Leu159Leu
M0061911 PCEHIHHK_00005 5557 5 Skin 0.04 protein_coding synonymous_variant LOW 546A>G Glu182Glu
M0061912 PCEHIHHK_00005 5575 5 Skin 0.04 protein_coding synonymous_variant LOW 564G>A Thr188Thr
M0061913 PCEHIHHK_00005 5593 5 Skin 0.04 protein_coding synonymous_variant LOW 582T>C Arg194Arg
M0061914 PCEHIHHK_00005 5596 3 Skin 0.03 protein_coding synonymous_variant LOW 585C>T Arg195Arg
M0061915 PCEHIHHK_00005 5634 3 Skin 0.03 protein_coding missense_variant MODERATE 623G>A Arg208His
M0061916 PCEHIHHK_00005 5647 5 Skin 0.04 protein_coding synonymous_variant LOW 636T>C Ala212Ala
M0061917 PCEHIHHK_00005 5662 3 Skin 0.03 protein_coding synonymous_variant LOW 651G>A Arg217Arg
M0061918 PCEHIHHK_00005 5767 6 Skin 0.05 protein_coding synonymous_variant LOW 756T>C Ala252Ala
M0061919 PCEHIHHK_00005 5794 6 Skin 0.05 protein_coding missense_variant MODERATE 783A>C Glu261Asp
M0061920 PCEHIHHK_00005 5803 6 Skin 0.05 protein_coding synonymous_variant LOW 792G>A Lys264Lys
M0061921 PCEHIHHK_00005 5806 3 Skin 0.03 protein_coding synonymous_variant LOW 795G>A Glu265Glu
M0061922 PCEHIHHK_00005 5864 3 Skin 0.03 protein_coding missense_variant MODERATE 853A>G Arg285Gly
M0061923 PCEHIHHK_00005 5875 5 Skin 0.04 protein_coding synonymous_variant LOW 864C>T Asp288Asp
M0061924 PCEHIHHK_00004 4164 4 Skin 0.03 protein_coding missense_variant MODERATE 334A>C Ser112Arg
M0061925 PCEHIHHK_00002 2018 3 Skin 0.03 protein_coding synonymous_variant LOW 873C>T Ala291Ala
M0061926 PCEHIHHK_00004 4646 3 Skin 0.03 protein_coding synonymous_variant LOW 816T>C Asp272Asp
M0061927 PCEHIHHK_00004 4655 3 Skin 0.03 protein_coding synonymous_variant LOW 825T>C Ala275Ala
M0061928 PCEHIHHK_00004 4684 3 Skin 0.03 protein_coding missense_variant MODERATE 854G>A Arg285His
M0061929 PCEHIHHK_00005 5859 3 Skin 0.03 protein_coding missense_variant MODERATE 848C>T Ala283Val
M0061930 PCEHIHHK_00002 1931 3 Skin 0.03 protein_coding synonymous_variant LOW 960T>C Ser320Ser
M0061931 PCEHIHHK_00002 1976 3 Skin 0.03 protein_coding synonymous_variant LOW 915T>C Ser305Ser
M0061932 PCEHIHHK_00002 2192 3 Skin 0.03 protein_coding synonymous_variant LOW 699G>A Glu233Glu
M0061933 PCEHIHHK_00002 2198 3 Skin 0.03 protein_coding synonymous_variant LOW 693C>T Ala231Ala
M0061934 PCEHIHHK_00002 2213 3 Skin 0.03 protein_coding synonymous_variant LOW 678C>T Ile226Ile
M0061935 PCEHIHHK_00002 2222 3 Skin 0.03 protein_coding synonymous_variant LOW 669C>T Gly223Gly
M0061936 PCEHIHHK_00002 2225 3 Skin 0.03 protein_coding synonymous_variant LOW 666T>C Gly222Gly
M0061937 PCEHIHHK_00002 2255 3 Skin 0.03 protein_coding synonymous_variant LOW 636A>G Thr212Thr
M0061938 PCEHIHHK_00002 2880 3 Skin 0.03 protein_coding missense_variant MODERATE 11C>T Ala4Val
M0061939 PCEHIHHK_00002 2972 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -82T>C None
M0061940 PCEHIHHK_00002 3045 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -155C>T None
M0061941 PCEHIHHK_00003 3303 3 Skin 0.03 protein_coding synonymous_variant LOW 195T>G Leu65Leu
M0061942 PCEHIHHK_00003 3312 3 Skin 0.03 protein_coding synonymous_variant LOW 186T>C Val62Val
M0061943 PCEHIHHK_00003 3342 3 Skin 0.03 protein_coding synonymous_variant LOW 156G>T Leu52Leu
M0061944 PCEHIHHK_00003 3405 3 Skin 0.03 protein_coding synonymous_variant LOW 93C>T Leu31Leu
M0061945 PCEHIHHK_00003 3423 3 Skin 0.03 protein_coding synonymous_variant LOW 75T>C Thr25Thr
M0061946 PCEHIHHK_00005 5758 3 Skin 0.03 protein_coding synonymous_variant LOW 747C>T Cys249Cys
M0061947 PCEHIHHK_00005 5770 3 Skin 0.03 protein_coding synonymous_variant LOW 759G>A Glu253Glu
M0061948 PCEHIHHK_00005 5926 4 Skin 0.03 protein_coding synonymous_variant LOW 915A>G Glu305Glu
M0061949 PCEHIHHK_00005 5970 4 Skin 0.03 protein_coding missense_variant MODERATE 959G>A Ser320Asn
M0061950 PCEHIHHK_00005 6188 4 Skin 0.03 protein_coding missense_variant MODERATE 1177G>A Gly393Ser
M0061951 PCEHIHHK_00006 8359 3 Skin 0.03 protein_coding synonymous_variant LOW 666C>T Gly222Gly
M0061952 PCEHIHHK_00006 8530 3 Skin 0.03 protein_coding synonymous_variant LOW 495T>C Thr165Thr
M0061953 PCEHIHHK_00004 4502 3 Skin 0.03 protein_coding synonymous_variant LOW 672A>G Gly224Gly






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term