Annotation Categories of the Plasmid Cluster
Summary of the plasmid cluster
Basic Information about the Plasmid Cluster
Cluster Information |
Plasmid Cluster ID |
C2890 |
Reference Plasmid |
DP1808006685_bin.8__NODE_148_length_6793_cov_0.887362 |
Reference Plasmid Size |
6793 |
Reference Plasmid GC Content |
0.42 |
Reference Plasmid Mobility Type |
non-mobilizable |
Mutation sites in the plasmid cluster
The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..
mutid |
gname |
pos |
count |
tissue |
frequnt |
biotype |
consequence |
impact |
nucchange |
aachange |
M0065785 |
DBBLFDMD_00005 |
3746 |
10 |
Skin |
0.36 |
protein_coding |
missense_variant |
MODERATE |
149C>A |
Pro50Gln |
M0065786 |
DBBLFDMD_00005 |
3771 |
14 |
Skin |
0.50 |
protein_coding |
synonymous_variant |
LOW |
174G>A |
Thr58Thr |
M0065787 |
DBBLFDMD_00005 |
3836 |
5 |
Skin |
0.18 |
protein_coding |
missense_variant |
MODERATE |
239G>A |
Arg80Gln |
M0065788 |
DBBLFDMD_00005 |
3867 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
270A>G |
Ala90Ala |
M0065789 |
DBBLFDMD_00005 |
3921 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
324G>A |
Thr108Thr |
M0065790 |
DBBLFDMD_00005 |
3927 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
330G>A |
Gly110Gly |
M0065791 |
DBBLFDMD_00005 |
3936 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
339G>C |
Val113Val |
M0065792 |
DBBLFDMD_00005 |
3939 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
342G>A |
Ala114Ala |
M0065793 |
DBBLFDMD_00005 |
3960 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
363C>T |
Ser121Ser |
M0065794 |
DBBLFDMD_00005 |
4017 |
10 |
Skin |
0.36 |
protein_coding |
synonymous_variant |
LOW |
420T>G |
Thr140Thr |
M0065795 |
DBBLFDMD_00005 |
4053 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
456G>A |
Gly152Gly |
M0065796 |
DBBLFDMD_00005 |
4159 |
12 |
Skin |
0.43 |
protein_coding |
synonymous_variant |
LOW |
562C>T |
Leu188Leu |
M0065797 |
DBBLFDMD_00005 |
4164 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
567C>G |
Ala189Ala |
M0065798 |
DBBLFDMD_00005 |
4179 |
11 |
Skin |
0.39 |
protein_coding |
missense_variant |
MODERATE |
582C>G |
His194Gln |
M0065799 |
DBBLFDMD_00005 |
4185 |
14 |
Skin |
0.50 |
protein_coding |
missense_variant |
MODERATE |
588A>C |
Lys196Asn |
M0065800 |
DBBLFDMD_00005 |
4191 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
594T>A |
Val198Val |
M0065801 |
DBBLFDMD_00005 |
4215 |
12 |
Skin |
0.43 |
protein_coding |
synonymous_variant |
LOW |
618C>G |
Ser206Ser |
M0065802 |
DBBLFDMD_00005 |
4216 |
12 |
Skin |
0.43 |
protein_coding |
missense_variant |
MODERATE |
619C>T |
Pro207Ser |
M0065803 |
DBBLFDMD_00005 |
4219 |
12 |
Skin |
0.43 |
protein_coding |
missense_variant |
MODERATE |
622A>G |
Thr208Ala |
M0065804 |
DBBLFDMD_00005 |
4221 |
12 |
Skin |
0.43 |
protein_coding |
synonymous_variant |
LOW |
624A>G |
Thr208Thr |
M0065805 |
DBBLFDMD_00005 |
4242 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
645C>T |
His215His |
M0065806 |
DBBLFDMD_00005 |
4262 |
10 |
Skin |
0.36 |
protein_coding |
missense_variant |
MODERATE |
665T>C |
Ile222Thr |
M0065807 |
DBBLFDMD_00005 |
4284 |
14 |
Skin |
0.50 |
protein_coding |
synonymous_variant |
LOW |
687C>T |
Arg229Arg |
M0065808 |
DBBLFDMD_00005 |
4290 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
693C>T |
Tyr231Tyr |
M0065809 |
DBBLFDMD_00005 |
4305 |
14 |
Skin |
0.50 |
protein_coding |
synonymous_variant |
LOW |
708T>C |
Ile236Ile |
M0065810 |
DBBLFDMD_00005 |
4308 |
10 |
Skin |
0.36 |
protein_coding |
synonymous_variant |
LOW |
711C>T |
Gly237Gly |
M0065811 |
DBBLFDMD_00005 |
4312 |
8 |
Skin |
0.29 |
protein_coding |
missense_variant |
MODERATE |
715T>C |
Phe239Leu |
M0065812 |
DBBLFDMD_00005 |
4317 |
8 |
Skin |
0.29 |
protein_coding |
synonymous_variant |
LOW |
720C>T |
Thr240Thr |
M0065813 |
DBBLFDMD_00005 |
4335 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
738G>T |
Ala246Ala |
M0065814 |
DBBLFDMD_00005 |
4347 |
8 |
Skin |
0.29 |
protein_coding |
synonymous_variant |
LOW |
750T>C |
Thr250Thr |
M0065815 |
DBBLFDMD_00005 |
4374 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
777G>A |
Ala259Ala |
M0065816 |
DBBLFDMD_00005 |
4419 |
14 |
Skin |
0.50 |
protein_coding |
synonymous_variant |
LOW |
822T>C |
Gly274Gly |
M0065817 |
DBBLFDMD_00005 |
4425 |
13 |
Skin |
0.46 |
protein_coding |
synonymous_variant |
LOW |
828A>G |
Ser276Ser |
M0065818 |
DBBLFDMD_00005 |
4437 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
840C>T |
Gly280Gly |
M0065819 |
DBBLFDMD_00005 |
4452 |
13 |
Skin |
0.46 |
protein_coding |
synonymous_variant |
LOW |
855C>T |
Gly285Gly |
M0065820 |
DBBLFDMD_00005 |
4461 |
10 |
Skin |
0.36 |
protein_coding |
synonymous_variant |
LOW |
864G>A |
Val288Val |
M0065821 |
DBBLFDMD_00005 |
4464 |
13 |
Skin |
0.46 |
protein_coding |
synonymous_variant |
LOW |
867G>T |
Gly289Gly |
M0065822 |
DBBLFDMD_00005 |
4467 |
14 |
Skin |
0.50 |
protein_coding |
missense_variant |
MODERATE |
870A>T |
Gln290His |
M0065823 |
DBBLFDMD_00005 |
4581 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
984G>A |
Leu328Leu |
M0065824 |
DBBLFDMD_00005 |
4602 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
1005C>T |
Thr335Thr |
M0065825 |
DBBLFDMD_00005 |
4626 |
12 |
Skin |
0.43 |
protein_coding |
synonymous_variant |
LOW |
1029C>T |
Val343Val |
M0065826 |
DBBLFDMD_00005 |
4635 |
16 |
Skin |
0.57 |
protein_coding |
synonymous_variant |
LOW |
1038A>G |
Leu346Leu |
M0065827 |
DBBLFDMD_00005 |
4638 |
16 |
Skin |
0.57 |
protein_coding |
synonymous_variant |
LOW |
1041C>T |
Tyr347Tyr |
M0065828 |
DBBLFDMD_00005 |
4668 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
1071A>T |
Gly357Gly |
M0065829 |
DBBLFDMD_00005 |
4715 |
17 |
Skin |
0.61 |
protein_coding |
missense_variant |
MODERATE |
1118C>T |
Ser373Leu |
M0065830 |
DBBLFDMD_00005 |
4722 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
1125A>G |
Gly375Gly |
M0065831 |
DBBLFDMD_00005 |
4797 |
21 |
Skin |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1200C>G |
Val400Val |
M0065832 |
DBBLFDMD_00005 |
4818 |
19 |
Skin |
0.68 |
protein_coding |
synonymous_variant |
LOW |
1221A>G |
Glu407Glu |
M0065833 |
DBBLFDMD_00005 |
4827 |
14 |
Skin |
0.50 |
protein_coding |
missense_variant |
MODERATE |
1230G>A |
Met410Ile |
M0065834 |
DBBLFDMD_00006 |
4883 |
20 |
Skin |
0.71 |
protein_coding |
missense_variant |
MODERATE |
762G>T |
Lys254Asn |
M0065835 |
DBBLFDMD_00006 |
5048 |
21 |
Skin |
0.75 |
protein_coding |
synonymous_variant |
LOW |
597C>T |
Ile199Ile |
M0065836 |
DBBLFDMD_00006 |
5108 |
17 |
Skin |
0.61 |
protein_coding |
synonymous_variant |
LOW |
537T>C |
Ser179Ser |
M0065837 |
DBBLFDMD_00006 |
5383 |
22 |
Skin |
0.79 |
protein_coding |
missense_variant |
MODERATE |
262G>A |
Asp88Asn |
M0065838 |
DBBLFDMD_00006 |
5388 |
22 |
Skin |
0.79 |
protein_coding |
missense_variant |
MODERATE |
257T>C |
Val86Ala |
M0065839 |
DBBLFDMD_00006 |
5437 |
14 |
Skin |
0.50 |
protein_coding |
missense_variant |
MODERATE |
208A>G |
Ile70Val |
M0065840 |
DBBLFDMD_00006 |
5450 |
20 |
Skin |
0.71 |
protein_coding |
synonymous_variant |
LOW |
195C>T |
Ser65Ser |
M0065841 |
DBBLFDMD_00006 |
5465 |
16 |
Skin |
0.57 |
protein_coding |
missense_variant |
MODERATE |
180C>G |
Asp60Glu |
M0065842 |
DBBLFDMD_00006 |
5890 |
24 |
Skin |
0.86 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-246C>T |
None |
M0065843 |
DBBLFDMD_00008 |
5946 |
9 |
Skin |
0.32 |
protein_coding |
missense_variant |
MODERATE |
24G>T |
Lys8Asn |
M0065844 |
DBBLFDMD_00008 |
5952 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
30G>A |
Gly10Gly |
M0065845 |
DBBLFDMD_00008 |
5953 |
9 |
Skin |
0.32 |
protein_coding |
missense_variant |
MODERATE |
31C>A |
Gln11Lys |
M0065846 |
DBBLFDMD_00008 |
5985 |
16 |
Skin |
0.57 |
protein_coding |
synonymous_variant |
LOW |
63T>C |
Asn21Asn |
M0065847 |
DBBLFDMD_00008 |
6018 |
13 |
Skin |
0.46 |
protein_coding |
synonymous_variant |
LOW |
96G>A |
Gly32Gly |
M0065848 |
DBBLFDMD_00008 |
6027 |
12 |
Skin |
0.43 |
protein_coding |
synonymous_variant |
LOW |
105T>C |
Arg35Arg |
M0065849 |
DBBLFDMD_00008 |
6069 |
16 |
Skin |
0.57 |
protein_coding |
synonymous_variant |
LOW |
147G>A |
Ala49Ala |
M0065850 |
DBBLFDMD_00008 |
6111 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
189G>A |
Ser63Ser |
M0065851 |
DBBLFDMD_00006 |
6277 |
9 |
Skin |
0.32 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-633T>C |
None |
M0065852 |
DBBLFDMD_00006 |
6279 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-635T>C |
None |
M0065853 |
DBBLFDMD_00006 |
6517 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-873C>G |
None |
M0065854 |
DBBLFDMD_00006 |
6526 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-882A>T |
None |
M0065855 |
DBBLFDMD_00006 |
5305 |
12 |
Skin |
0.43 |
protein_coding |
missense_variant |
MODERATE |
340G>A |
Val114Ile |
M0065856 |
DBBLFDMD_00006 |
5468 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
177T>C |
Gly59Gly |
M0065857 |
DBBLFDMD_00006 |
5492 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
153T>C |
Gly51Gly |
M0065858 |
DBBLFDMD_00006 |
5501 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
144T>A |
Val48Val |
M0065859 |
DBBLFDMD_00006 |
5514 |
11 |
Skin |
0.39 |
protein_coding |
missense_variant |
MODERATE |
131G>A |
Gly44Asp |
M0065860 |
DBBLFDMD_00006 |
5540 |
8 |
Skin |
0.29 |
protein_coding |
synonymous_variant |
LOW |
105T>C |
Ala35Ala |
M0065861 |
DBBLFDMD_00006 |
6178 |
7 |
Skin |
0.25 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-534G>T |
None |
M0065862 |
DBBLFDMD_00006 |
6253 |
7 |
Skin |
0.25 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-609C>T |
None |
M0065863 |
DBBLFDMD_00001 |
3570 |
11 |
Skin |
0.39 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3183G>A |
None |
M0065864 |
DBBLFDMD_00001 |
3575 |
8 |
Skin |
0.29 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3188A>G |
None |
M0065865 |
DBBLFDMD_00001 |
3594 |
7 |
Skin |
0.25 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3207G>T |
None |
M0065866 |
DBBLFDMD_00005 |
3601 |
9 |
Skin |
0.32 |
protein_coding |
missense_variant |
MODERATE |
4T>C |
Ser2Pro |
M0065867 |
DBBLFDMD_00005 |
3607 |
7 |
Skin |
0.25 |
protein_coding |
missense_variant |
MODERATE |
10C>T |
Pro4Ser |
M0065868 |
DBBLFDMD_00005 |
3659 |
7 |
Skin |
0.25 |
protein_coding |
missense_variant |
MODERATE |
62T>C |
Val21Ala |
M0065869 |
DBBLFDMD_00005 |
3678 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
81T>A |
Ser27Ser |
M0065870 |
DBBLFDMD_00005 |
3687 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
90G>C |
Arg30Arg |
M0065871 |
DBBLFDMD_00005 |
4710 |
10 |
Skin |
0.36 |
protein_coding |
synonymous_variant |
LOW |
1113C>T |
Ala371Ala |
M0065872 |
DBBLFDMD_00005 |
4713 |
8 |
Skin |
0.29 |
protein_coding |
synonymous_variant |
LOW |
1116C>T |
Tyr372Tyr |
M0065873 |
DBBLFDMD_00005 |
4723 |
7 |
Skin |
0.25 |
protein_coding |
missense_variant |
MODERATE |
1126A>G |
Ile376Val |
M0065874 |
DBBLFDMD_00005 |
4731 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
1134C>T |
Val378Val |
M0065875 |
DBBLFDMD_00005 |
4773 |
6 |
Skin |
0.21 |
protein_coding |
missense_variant |
MODERATE |
1176G>A |
Met392Ile |
M0065876 |
DBBLFDMD_00002 |
892 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
417G>A |
Thr139Thr |
M0065877 |
DBBLFDMD_00002 |
946 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
471C>T |
Pro157Pro |
M0065878 |
DBBLFDMD_00002 |
949 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
474A>G |
Leu158Leu |
M0065879 |
DBBLFDMD_00002 |
955 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
480T>C |
Thr160Thr |
M0065880 |
DBBLFDMD_00002 |
981 |
4 |
Skin |
0.14 |
protein_coding |
missense_variant |
MODERATE |
506C>T |
Ala169Val |
M0065881 |
DBBLFDMD_00002 |
1054 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
579G>C |
Ala193Ala |
M0065882 |
DBBLFDMD_00002 |
1100 |
4 |
Skin |
0.14 |
protein_coding |
missense_variant |
MODERATE |
625G>A |
Val209Ile |
M0065883 |
DBBLFDMD_00002 |
1102 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
627C>T |
Val209Val |
M0065884 |
DBBLFDMD_00002 |
1117 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
642C>G |
Pro214Pro |
M0065885 |
DBBLFDMD_00002 |
1123 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
648A>G |
Leu216Leu |
M0065886 |
DBBLFDMD_00002 |
1150 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
675G>A |
Glu225Glu |
M0065887 |
DBBLFDMD_00002 |
1345 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
870A>G |
Glu290Glu |
M0065888 |
DBBLFDMD_00002 |
1372 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
897C>T |
Tyr299Tyr |
M0065889 |
DBBLFDMD_00002 |
1433 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
958C>T |
Leu320Leu |
M0065890 |
DBBLFDMD_00002 |
1435 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
960G>A |
Leu320Leu |
M0065891 |
DBBLFDMD_00002 |
1456 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
981C>T |
Arg327Arg |
M0065892 |
DBBLFDMD_00002 |
1467 |
4 |
Skin |
0.14 |
protein_coding |
missense_variant |
MODERATE |
992G>A |
Gly331Glu |
M0065893 |
DBBLFDMD_00002 |
1513 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
1038A>T |
Arg346Arg |
M0065894 |
DBBLFDMD_00002 |
1591 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
1116G>A |
Ser372Ser |
M0065895 |
DBBLFDMD_00002 |
1648 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
1173C>A |
Ile391Ile |
M0065896 |
DBBLFDMD_00002 |
1687 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
1212C>T |
Ile404Ile |
M0065897 |
DBBLFDMD_00002 |
1690 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
1215G>A |
Pro405Pro |
M0065898 |
DBBLFDMD_00002 |
1726 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
1251C>T |
Ala417Ala |
M0065899 |
DBBLFDMD_00003 |
1951 |
9 |
Skin |
0.32 |
protein_coding |
synonymous_variant |
LOW |
165T>C |
Thr55Thr |
M0065900 |
DBBLFDMD_00003 |
2128 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
342A>G |
Ala114Ala |
M0065901 |
DBBLFDMD_00003 |
2209 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
423G>A |
Thr141Thr |
M0065902 |
DBBLFDMD_00003 |
2272 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
486C>T |
Arg162Arg |
M0065903 |
DBBLFDMD_00003 |
2276 |
7 |
Skin |
0.25 |
protein_coding |
missense_variant |
MODERATE |
490G>A |
Val164Ile |
M0065904 |
DBBLFDMD_00001 |
2519 |
6 |
Skin |
0.21 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2132T>G |
None |
M0065905 |
DBBLFDMD_00001 |
2520 |
6 |
Skin |
0.21 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2133T>C |
None |
M0065906 |
DBBLFDMD_00001 |
2521 |
7 |
Skin |
0.25 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2134C>A |
None |
M0065907 |
DBBLFDMD_00001 |
2527 |
6 |
Skin |
0.21 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2140G>A |
None |
M0065908 |
DBBLFDMD_00001 |
2531 |
8 |
Skin |
0.29 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2144A>C |
None |
M0065909 |
DBBLFDMD_00001 |
2532 |
6 |
Skin |
0.21 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2145G>C |
None |
M0065910 |
DBBLFDMD_00001 |
2659 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2272T>C |
None |
M0065911 |
DBBLFDMD_00001 |
2673 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2286C>T |
None |
M0065912 |
DBBLFDMD_00004 |
2918 |
7 |
Skin |
0.25 |
protein_coding |
missense_variant |
MODERATE |
142A>T |
Thr48Ser |
M0065913 |
DBBLFDMD_00004 |
2926 |
8 |
Skin |
0.29 |
protein_coding |
synonymous_variant |
LOW |
150T>C |
Asn50Asn |
M0065914 |
DBBLFDMD_00004 |
2971 |
8 |
Skin |
0.29 |
protein_coding |
synonymous_variant |
LOW |
195T>C |
Leu65Leu |
M0065915 |
DBBLFDMD_00004 |
2985 |
9 |
Skin |
0.32 |
protein_coding |
missense_variant |
MODERATE |
209G>A |
Ser70Asn |
M0065916 |
DBBLFDMD_00004 |
3136 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
360G>T |
Leu120Leu |
M0065917 |
DBBLFDMD_00004 |
3187 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
411G>A |
Lys137Lys |
M0065918 |
DBBLFDMD_00001 |
3476 |
8 |
Skin |
0.29 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3089T>G |
None |
M0065919 |
DBBLFDMD_00001 |
3480 |
8 |
Skin |
0.29 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3093A>C |
None |
M0065920 |
DBBLFDMD_00001 |
3488 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3101C>T |
None |
M0065921 |
DBBLFDMD_00001 |
3522 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3135G>A |
None |
M0065922 |
DBBLFDMD_00001 |
3538 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3151C>A |
None |
M0065923 |
DBBLFDMD_00001 |
3559 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3172C>T |
None |
M0065924 |
DBBLFDMD_00001 |
3560 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3173G>A |
None |
M0065925 |
DBBLFDMD_00005 |
4608 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
1011C>G |
Pro337Pro |
M0065926 |
DBBLFDMD_00005 |
4623 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
1026C>T |
Thr342Thr |
M0065927 |
DBBLFDMD_00005 |
4633 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
1036T>C |
Leu346Leu |
M0065928 |
DBBLFDMD_00006 |
5027 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
618C>T |
Ala206Ala |
M0065929 |
DBBLFDMD_00006 |
5060 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
585G>A |
Leu195Leu |
M0065930 |
DBBLFDMD_00006 |
6541 |
11 |
Skin |
0.39 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-897G>A |
None |
M0065931 |
DBBLFDMD_00006 |
6543 |
10 |
Skin |
0.36 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-899T>C |
None |
M0065932 |
DBBLFDMD_00006 |
6544 |
11 |
Skin |
0.39 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-900G>A |
None |
M0065933 |
DBBLFDMD_00006 |
6673 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1029A>G |
None |
M0065934 |
DBBLFDMD_00006 |
6703 |
10 |
Skin |
0.36 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1059A>T |
None |
M0065935 |
DBBLFDMD_00006 |
6715 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1071G>A |
None |
M0065936 |
DBBLFDMD_00005 |
3639 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
42G>T |
Leu14Leu |
M0065937 |
DBBLFDMD_00005 |
3693 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
96G>A |
Ser32Ser |
M0065938 |
DBBLFDMD_00005 |
4542 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
945T>C |
Pro315Pro |
M0065939 |
DBBLFDMD_00005 |
4677 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
1080A>G |
Leu360Leu |
M0065940 |
DBBLFDMD_00005 |
4752 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
1155G>A |
Gln385Gln |
M0065941 |
DBBLFDMD_00005 |
4776 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
1179G>A |
Ala393Ala |
M0065942 |
DBBLFDMD_00006 |
5126 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
519A>T |
Arg173Arg |
M0065943 |
DBBLFDMD_00006 |
5135 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
510C>T |
Asp170Asp |
M0065944 |
DBBLFDMD_00006 |
5309 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
336T>C |
Phe112Phe |
M0065945 |
DBBLFDMD_00008 |
6109 |
5 |
Skin |
0.18 |
protein_coding |
missense_variant |
MODERATE |
187T>A |
Ser63Thr |
M0065946 |
DBBLFDMD_00002 |
1610 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
1135T>C |
Leu379Leu |
M0065947 |
DBBLFDMD_00003 |
1822 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
36C>T |
Ile12Ile |
M0065948 |
DBBLFDMD_00003 |
1858 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
72C>T |
Gly24Gly |
M0065949 |
DBBLFDMD_00003 |
1990 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
204C>G |
Gly68Gly |
M0065950 |
DBBLFDMD_00003 |
1993 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
207A>G |
Leu69Leu |
M0065951 |
DBBLFDMD_00003 |
2008 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
222T>C |
Asp74Asp |
M0065952 |
DBBLFDMD_00003 |
2029 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
243A>G |
Val81Val |
M0065953 |
DBBLFDMD_00001 |
2714 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2327G>T |
None |
M0065954 |
DBBLFDMD_00001 |
2715 |
6 |
Skin |
0.21 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2328G>C |
None |
M0065955 |
DBBLFDMD_00004 |
2788 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
12A>G |
Leu4Leu |
M0065956 |
DBBLFDMD_00004 |
2809 |
8 |
Skin |
0.29 |
protein_coding |
synonymous_variant |
LOW |
33G>A |
Ala11Ala |
M0065957 |
DBBLFDMD_00004 |
2816 |
5 |
Skin |
0.18 |
protein_coding |
missense_variant |
MODERATE |
40A>G |
Ser14Gly |
M0065958 |
DBBLFDMD_00006 |
5605 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
40C>T |
Leu14Leu |
M0065959 |
DBBLFDMD_00006 |
5615 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
30T>C |
Asp10Asp |
M0065960 |
DBBLFDMD_00006 |
5618 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
27A>G |
Gln9Gln |
M0065961 |
DBBLFDMD_00003 |
1945 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
159C>T |
Cys53Cys |
M0065962 |
DBBLFDMD_00003 |
1946 |
4 |
Skin |
0.14 |
protein_coding |
missense_variant |
MODERATE |
160A>G |
Ile54Val |
M0065963 |
DBBLFDMD_00003 |
2071 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
285C>A |
Leu95Leu |
M0065964 |
DBBLFDMD_00003 |
2074 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
288C>T |
Leu96Leu |
M0065965 |
DBBLFDMD_00003 |
2080 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
294C>T |
Asp98Asp |
M0065966 |
DBBLFDMD_00001 |
2432 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2045T>C |
None |
M0065967 |
DBBLFDMD_00001 |
2490 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2103A>C |
None |
M0065968 |
DBBLFDMD_00001 |
2493 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2106G>T |
None |
M0065969 |
DBBLFDMD_00001 |
2572 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2185G>A |
None |
M0065970 |
DBBLFDMD_00004 |
2843 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
67T>C |
Leu23Leu |
M0065971 |
DBBLFDMD_00004 |
2905 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
129T>A |
Leu43Leu |
M0065972 |
DBBLFDMD_00004 |
2935 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
159G>C |
Ala53Ala |
M0065973 |
DBBLFDMD_00004 |
3091 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
315T>C |
Pro105Pro |
M0065974 |
DBBLFDMD_00004 |
3223 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
447A>G |
Ala149Ala |
M0065975 |
DBBLFDMD_00004 |
3226 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
450G>T |
Ala150Ala |
M0065976 |
DBBLFDMD_00004 |
3259 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
483T>C |
Thr161Thr |
M0065977 |
DBBLFDMD_00004 |
3265 |
7 |
Skin |
0.25 |
protein_coding |
synonymous_variant |
LOW |
489A>G |
Ala163Ala |
M0065978 |
DBBLFDMD_00004 |
3301 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
525C>A |
Ser175Ser |
M0065979 |
DBBLFDMD_00001 |
3359 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2972C>T |
None |
M0065980 |
DBBLFDMD_00001 |
3380 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2993G>A |
None |
M0065981 |
DBBLFDMD_00001 |
3384 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2997T>C |
None |
M0065982 |
DBBLFDMD_00001 |
3386 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2999T>C |
None |
M0065983 |
DBBLFDMD_00001 |
3407 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3020A>G |
None |
M0065984 |
DBBLFDMD_00001 |
3410 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3023T>C |
None |
M0065985 |
DBBLFDMD_00001 |
3424 |
4 |
Skin |
0.14 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3037C>A |
None |
M0065986 |
DBBLFDMD_00005 |
3811 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
214T>C |
Leu72Leu |
M0065987 |
DBBLFDMD_00005 |
3951 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
354G>T |
Gly118Gly |
M0065988 |
DBBLFDMD_00005 |
4099 |
3 |
Skin |
0.11 |
protein_coding |
missense_variant |
MODERATE |
502C>G |
Leu168Val |
M0065989 |
DBBLFDMD_00005 |
4539 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
942G>A |
Ala314Ala |
M0065990 |
DBBLFDMD_00005 |
4545 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
948G>A |
Lys316Lys |
M0065991 |
DBBLFDMD_00005 |
4548 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
951G>C |
Thr317Thr |
M0065992 |
DBBLFDMD_00006 |
4853 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
792A>G |
Lys264Lys |
M0065993 |
DBBLFDMD_00006 |
4892 |
11 |
Skin |
0.39 |
protein_coding |
synonymous_variant |
LOW |
753A>G |
Leu251Leu |
M0065994 |
DBBLFDMD_00007 |
5704 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
153A>T |
Gly51Gly |
M0065995 |
DBBLFDMD_00008 |
6039 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
117C>G |
Gly39Gly |
M0065996 |
DBBLFDMD_00008 |
6070 |
8 |
Skin |
0.29 |
protein_coding |
synonymous_variant |
LOW |
148T>C |
Leu50Leu |
M0065997 |
DBBLFDMD_00008 |
6073 |
8 |
Skin |
0.29 |
protein_coding |
missense_variant |
MODERATE |
151G>A |
Val51Ile |
M0065998 |
DBBLFDMD_00001 |
2472 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2085G>A |
None |
M0065999 |
DBBLFDMD_00004 |
2794 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
18C>T |
Val6Val |
M0066000 |
DBBLFDMD_00004 |
2898 |
3 |
Skin |
0.11 |
protein_coding |
missense_variant |
MODERATE |
122C>A |
Ala41Glu |
M0066001 |
DBBLFDMD_00005 |
4806 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
1209A>G |
Leu403Leu |
M0066002 |
DBBLFDMD_00006 |
5020 |
3 |
Skin |
0.11 |
protein_coding |
missense_variant |
MODERATE |
625C>G |
Leu209Val |
M0066003 |
DBBLFDMD_00006 |
5219 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
426C>T |
Ile142Ile |
M0066004 |
DBBLFDMD_00006 |
5237 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
408T>C |
Tyr136Tyr |
M0066005 |
DBBLFDMD_00006 |
5240 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
405C>T |
Thr135Thr |
M0066006 |
DBBLFDMD_00006 |
5249 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
396C>T |
Arg132Arg |
M0066007 |
DBBLFDMD_00007 |
5731 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
126C>T |
Phe42Phe |
M0066008 |
DBBLFDMD_00007 |
5814 |
6 |
Skin |
0.21 |
protein_coding |
missense_variant |
MODERATE |
43G>A |
Ala15Thr |
M0066009 |
DBBLFDMD_00008 |
6152 |
7 |
Skin |
0.25 |
protein_coding |
missense_variant |
MODERATE |
230G>A |
Ser77Asn |
M0066010 |
DBBLFDMD_00008 |
6153 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
231T>C |
Ser77Ser |
M0066011 |
DBBLFDMD_00008 |
6154 |
6 |
Skin |
0.21 |
protein_coding |
stop_lost&splice_region_variant |
HIGH |
232T>A |
Ter78Argext*? |
M0066012 |
DBBLFDMD_00006 |
6235 |
6 |
Skin |
0.21 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-591T>C |
None |
M0066013 |
DBBLFDMD_00006 |
6262 |
6 |
Skin |
0.21 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-618G>A |
None |
M0066014 |
DBBLFDMD_00006 |
6571 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-927A>G |
None |
M0066015 |
DBBLFDMD_00006 |
6580 |
6 |
Skin |
0.21 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-936C>T |
None |
M0066016 |
DBBLFDMD_00006 |
6595 |
5 |
Skin |
0.18 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-951G>A |
None |
M0066017 |
DBBLFDMD_00006 |
6685 |
3 |
Skin |
0.11 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1041C>T |
None |
M0066018 |
DBBLFDMD_00002 |
988 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
513A>C |
Leu171Leu |
M0066019 |
DBBLFDMD_00003 |
2248 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
462A>G |
Lys154Lys |
M0066020 |
DBBLFDMD_00004 |
2824 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
48G>A |
Ser16Ser |
M0066021 |
DBBLFDMD_00006 |
5033 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
612C>T |
Thr204Thr |
M0066022 |
DBBLFDMD_00007 |
5710 |
3 |
Skin |
0.11 |
protein_coding |
missense_variant |
MODERATE |
147T>A |
Asn49Lys |
M0066023 |
DBBLFDMD_00007 |
5712 |
3 |
Skin |
0.11 |
protein_coding |
missense_variant |
MODERATE |
145A>G |
Asn49Asp |
M0066024 |
DBBLFDMD_00002 |
1478 |
3 |
Skin |
0.11 |
protein_coding |
missense_variant |
MODERATE |
1003C>A |
Leu335Ile |
M0066025 |
DBBLFDMD_00005 |
4821 |
6 |
Skin |
0.21 |
protein_coding |
synonymous_variant |
LOW |
1224A>G |
Pro408Pro |
M0066026 |
DBBLFDMD_00006 |
5477 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
168C>T |
Val56Val |
M0066027 |
DBBLFDMD_00006 |
5480 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
165G>T |
Ser55Ser |
M0066028 |
DBBLFDMD_00006 |
5489 |
4 |
Skin |
0.14 |
protein_coding |
missense_variant |
MODERATE |
156A>G |
Ile52Met |
M0066029 |
DBBLFDMD_00007 |
5701 |
3 |
Skin |
0.11 |
protein_coding |
synonymous_variant |
LOW |
156T>C |
Phe52Phe |
M0066030 |
DBBLFDMD_00004 |
3235 |
4 |
Skin |
0.14 |
protein_coding |
synonymous_variant |
LOW |
459C>T |
Gly153Gly |
M0066031 |
DBBLFDMD_00007 |
5775 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
82C>A |
Arg28Arg |
M0066032 |
DBBLFDMD_00007 |
5776 |
5 |
Skin |
0.18 |
protein_coding |
synonymous_variant |
LOW |
81G>A |
Leu27Leu |
M0066033 |
DBBLFDMD_00006 |
4956 |
3 |
Skin |
0.11 |
protein_coding |
missense_variant |
MODERATE |
689A>G |
Lys230Arg |
Analysis of virulence factors contributing to bacterial pathogenicity
This table presents virulence factors identified within the plasmid cluster.
Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.
Gene Name |
vf_gene_id |
vf_name |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
vf_category |
gene_description |
condition |
Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact
This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.
Gene Name |
compound |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
group |
Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents
This table presents antimicrobial resistance genes identified within the plasmid cluster.
Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.
Gene Name |
aro_accession |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
drug_class |
amr_gene_family |
resistance_mechanism |
Analysis of pathogenicity genes to explore pathogen-host interactions
This table presents host pathogen-host interactions within the plasmid cluster.
Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.
Gene Name |
phi_molconn_id |
host gene_name |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
host_descripton |
disease_name |
function |
phenotype_of_mutant |
Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation
This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.
Gene Name |
cazy_id |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification
This table presents transport proteins within the plasmid cluster.
Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.
Gene Name |
tcid |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
class_field |
class_term |
subclass |
subclass_term |
family |
family_term |