Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C3086
  Reference Plasmid   MET0084_bin.3__k81_4760
  Reference Plasmid Size   60165
  Reference Plasmid GC Content   0.32
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0073720 CCGFHDJC_00023 21938 5 Skin 0.08 protein_coding synonymous_variant LOW 1428C>T Ile476Ile
M0073721 CCGFHDJC_00023 22012 7 Skin 0.12 protein_coding missense_variant MODERATE 1502T>C Ile501Thr
M0073722 CCGFHDJC_00020 22033 13 Skin 0.22 protein_coding upstream_gene_variant MODIFIER -2978T>C None
M0073723 CCGFHDJC_00020 22093 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3038C>A None
M0073724 CCGFHDJC_00020 22102 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3047A>G None
M0073725 CCGFHDJC_00020 22103 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3048G>A None
M0073726 CCGFHDJC_00020 22115 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3060G>A None
M0073727 CCGFHDJC_00020 22205 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3150C>T None
M0073728 CCGFHDJC_00024 22755 9 Skin 0.15 protein_coding missense_variant MODERATE 340A>G Arg114Gly
M0073729 CCGFHDJC_00024 23423 12 Skin 0.20 protein_coding synonymous_variant LOW 1008T>C Gly336Gly
M0073730 CCGFHDJC_00024 23525 10 Skin 0.17 protein_coding missense_variant MODERATE 1110T>A His370Gln
M0073731 CCGFHDJC_00024 24665 9 Skin 0.15 protein_coding synonymous_variant LOW 2250G>T Thr750Thr
M0073732 CCGFHDJC_00021 24695 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4646T>C None
M0073733 CCGFHDJC_00021 24861 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4812C>A None
M0073734 CCGFHDJC_00021 24890 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4841A>C None
M0073735 CCGFHDJC_00025 24981 8 Skin 0.14 protein_coding synonymous_variant LOW 213T>C His71His
M0073736 CCGFHDJC_00025 25222 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -29T>C None
M0073737 CCGFHDJC_00025 25225 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -32G>T None
M0073738 CCGFHDJC_00025 25230 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -37G>T None
M0073739 CCGFHDJC_00025 25266 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -73T>A None
M0073740 CCGFHDJC_00025 25294 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -101G>A None
M0073741 CCGFHDJC_00025 25302 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -109G>T None
M0073742 CCGFHDJC_00025 25303 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -110A>G None
M0073743 CCGFHDJC_00025 25304 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -111C>A None
M0073744 CCGFHDJC_00025 25309 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -116T>G None
M0073745 CCGFHDJC_00025 25310 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -117A>C None
M0073746 CCGFHDJC_00026 25329 8 Skin 0.14 protein_coding synonymous_variant LOW 525T>C Asn175Asn
M0073747 CCGFHDJC_00026 25332 8 Skin 0.14 protein_coding synonymous_variant LOW 522C>T Ser174Ser
M0073748 CCGFHDJC_00026 25354 9 Skin 0.15 protein_coding missense_variant MODERATE 500T>C Val167Ala
M0073749 CCGFHDJC_00026 25380 9 Skin 0.15 protein_coding synonymous_variant LOW 474C>T Gly158Gly
M0073750 CCGFHDJC_00026 25437 9 Skin 0.15 protein_coding synonymous_variant LOW 417T>C Thr139Thr
M0073751 CCGFHDJC_00026 25457 9 Skin 0.15 protein_coding missense_variant MODERATE 397G>A Asp133Asn
M0073752 CCGFHDJC_00026 25490 9 Skin 0.15 protein_coding synonymous_variant LOW 364T>C Leu122Leu
M0073753 CCGFHDJC_00026 25496 9 Skin 0.15 protein_coding missense_variant MODERATE 358A>G Lys120Glu
M0073754 CCGFHDJC_00026 25497 9 Skin 0.15 protein_coding synonymous_variant LOW 357C>A Gly119Gly
M0073755 CCGFHDJC_00026 25512 9 Skin 0.15 protein_coding synonymous_variant LOW 342G>C Val114Val
M0073756 CCGFHDJC_00026 25518 9 Skin 0.15 protein_coding synonymous_variant LOW 336G>A Glu112Glu
M0073757 CCGFHDJC_00026 25537 9 Skin 0.15 protein_coding missense_variant MODERATE 317C>A Ala106Glu
M0073758 CCGFHDJC_00026 25599 9 Skin 0.15 protein_coding missense_variant MODERATE 255A>T Gln85His
M0073759 CCGFHDJC_00026 25608 8 Skin 0.14 protein_coding synonymous_variant LOW 246G>T Ala82Ala
M0073760 CCGFHDJC_00026 25682 9 Skin 0.15 protein_coding missense_variant MODERATE 172G>A Ala58Thr
M0073761 CCGFHDJC_00026 25694 9 Skin 0.15 protein_coding synonymous_variant LOW 160T>C Leu54Leu
M0073762 CCGFHDJC_00026 25695 9 Skin 0.15 protein_coding synonymous_variant LOW 159C>G Gly53Gly
M0073763 CCGFHDJC_00026 25731 9 Skin 0.15 protein_coding synonymous_variant LOW 123G>A Glu41Glu
M0073764 CCGFHDJC_00026 25737 9 Skin 0.15 protein_coding missense_variant MODERATE 117A>T Lys39Asn
M0073765 CCGFHDJC_00026 25802 9 Skin 0.15 protein_coding missense_variant MODERATE 52G>A Glu18Lys
M0073766 CCGFHDJC_00025 25866 7 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -673T>G None
M0073767 CCGFHDJC_00025 25901 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -708C>T None
M0073768 CCGFHDJC_00025 25906 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -713A>G None
M0073769 CCGFHDJC_00025 25910 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -717G>A None
M0073770 CCGFHDJC_00025 25911 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -718A>G None
M0073771 CCGFHDJC_00025 25913 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -720C>T None
M0073772 CCGFHDJC_00025 25933 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -740G>A None
M0073773 CCGFHDJC_00025 26009 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -816A>G None
M0073774 CCGFHDJC_00025 26068 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -875T>C None
M0073775 CCGFHDJC_00025 26088 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -895T>G None
M0073776 CCGFHDJC_00025 26096 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -903G>A None
M0073777 CCGFHDJC_00025 26097 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -904T>G None
M0073778 CCGFHDJC_00027 26110 3 Skin 0.05 protein_coding synonymous_variant LOW 1998C>T Phe666Phe
M0073779 CCGFHDJC_00027 27613 5 Skin 0.08 protein_coding synonymous_variant LOW 495A>G Ala165Ala
M0073780 CCGFHDJC_00027 27676 3 Skin 0.05 protein_coding synonymous_variant LOW 432A>G Val144Val
M0073781 CCGFHDJC_00028 28838 3 Skin 0.05 protein_coding missense_variant MODERATE 99A>C Arg33Ser
M0073782 CCGFHDJC_00030 31598 4 Skin 0.07 protein_coding synonymous_variant LOW 408C>T Tyr136Tyr
M0073783 CCGFHDJC_00030 31823 4 Skin 0.07 protein_coding synonymous_variant LOW 183A>T Ile61Ile
M0073784 CCGFHDJC_00027 32045 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3938C>T None
M0073785 CCGFHDJC_00027 32061 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3954T>C None
M0073786 CCGFHDJC_00031 32401 4 Skin 0.07 protein_coding synonymous_variant LOW 729C>T Cys243Cys
M0073787 CCGFHDJC_00031 32406 5 Skin 0.08 protein_coding missense_variant MODERATE 724A>C Lys242Gln
M0073788 CCGFHDJC_00031 32471 3 Skin 0.05 protein_coding missense_variant MODERATE 659T>C Ile220Thr
M0073789 CCGFHDJC_00032 33945 6 Skin 0.10 protein_coding synonymous_variant LOW 1302T>C Asp434Asp
M0073790 CCGFHDJC_00032 34047 5 Skin 0.08 protein_coding synonymous_variant LOW 1200A>G Thr400Thr
M0073791 CCGFHDJC_00032 34134 5 Skin 0.08 protein_coding missense_variant MODERATE 1113C>G His371Gln
M0073792 CCGFHDJC_00032 34140 5 Skin 0.08 protein_coding synonymous_variant LOW 1107T>C Ile369Ile
M0073793 CCGFHDJC_00032 34596 3 Skin 0.05 protein_coding missense_variant MODERATE 651T>G Ile217Met
M0073794 CCGFHDJC_00033 36107 3 Skin 0.05 protein_coding synonymous_variant LOW 666A>C Ile222Ile
M0073795 CCGFHDJC_00045 47595 7 Skin 0.12 protein_coding synonymous_variant LOW 204G>A Pro68Pro
M0073796 CCGFHDJC_00045 47617 13 Skin 0.22 protein_coding missense_variant MODERATE 226A>G Ser76Gly
M0073797 CCGFHDJC_00041 47903 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3020A>G None
M0073798 CCGFHDJC_00041 47904 14 Skin 0.24 protein_coding upstream_gene_variant MODIFIER -3021A>G None
M0073799 CCGFHDJC_00046 48067 5 Skin 0.08 protein_coding missense_variant MODERATE 1178G>A Arg393His
M0073800 CCGFHDJC_00046 48089 5 Skin 0.08 protein_coding missense_variant MODERATE 1156C>T His386Tyr
M0073801 CCGFHDJC_00046 48117 5 Skin 0.08 protein_coding synonymous_variant LOW 1128G>A Val376Val
M0073802 CCGFHDJC_00046 48119 5 Skin 0.08 protein_coding missense_variant MODERATE 1126G>C Val376Leu
M0073803 CCGFHDJC_00046 48137 5 Skin 0.08 protein_coding missense_variant MODERATE 1108G>A Glu370Lys
M0073804 CCGFHDJC_00046 48144 5 Skin 0.08 protein_coding synonymous_variant LOW 1101A>C Ile367Ile
M0073805 CCGFHDJC_00046 48342 13 Skin 0.22 protein_coding synonymous_variant LOW 903A>G Glu301Glu
M0073806 CCGFHDJC_00046 48567 14 Skin 0.24 protein_coding synonymous_variant LOW 678C>A Gly226Gly
M0073807 CCGFHDJC_00046 48884 16 Skin 0.27 protein_coding missense_variant MODERATE 361G>A Val121Ile
M0073808 CCGFHDJC_00046 48906 16 Skin 0.27 protein_coding synonymous_variant LOW 339A>G Ser113Ser
M0073809 CCGFHDJC_00046 48912 10 Skin 0.17 protein_coding synonymous_variant LOW 333G>A Thr111Thr
M0073810 CCGFHDJC_00046 48918 16 Skin 0.27 protein_coding synonymous_variant LOW 327A>G Ala109Ala
M0073811 CCGFHDJC_00046 48942 16 Skin 0.27 protein_coding synonymous_variant LOW 303T>C Gly101Gly
M0073812 CCGFHDJC_00047 49883 12 Skin 0.20 protein_coding synonymous_variant LOW 1014C>T Phe338Phe
M0073813 CCGFHDJC_00047 49898 12 Skin 0.20 protein_coding synonymous_variant LOW 999T>C Pro333Pro
M0073814 CCGFHDJC_00047 49976 9 Skin 0.15 protein_coding synonymous_variant LOW 921G>A Gly307Gly
M0073815 CCGFHDJC_00047 50159 4 Skin 0.07 protein_coding synonymous_variant LOW 738G>A Arg246Arg
M0073816 CCGFHDJC_00047 50168 4 Skin 0.07 protein_coding missense_variant MODERATE 729T>G Asp243Glu
M0073817 CCGFHDJC_00047 50453 6 Skin 0.10 protein_coding synonymous_variant LOW 444C>T Pro148Pro
M0073818 CCGFHDJC_00047 50477 5 Skin 0.08 protein_coding synonymous_variant LOW 420G>A Leu140Leu
M0073819 CCGFHDJC_00047 50498 5 Skin 0.08 protein_coding synonymous_variant LOW 399C>T Ile133Ile
M0073820 CCGFHDJC_00047 50555 12 Skin 0.20 protein_coding synonymous_variant LOW 342C>T Asn114Asn
M0073821 CCGFHDJC_00047 50563 8 Skin 0.14 protein_coding synonymous_variant LOW 334C>T Leu112Leu
M0073822 CCGFHDJC_00047 50576 8 Skin 0.14 protein_coding synonymous_variant LOW 321C>T Ile107Ile
M0073823 CCGFHDJC_00047 50846 4 Skin 0.07 protein_coding missense_variant MODERATE 51T>G Ile17Met
M0073824 CCGFHDJC_00048 50990 8 Skin 0.14 protein_coding synonymous_variant LOW 93T>C Tyr31Tyr
M0073825 CCGFHDJC_00048 51031 10 Skin 0.17 protein_coding missense_variant MODERATE 52G>C Asp18His
M0073826 CCGFHDJC_00049 51390 12 Skin 0.20 protein_coding missense_variant MODERATE 77G>A Arg26Lys
M0073827 CCGFHDJC_00049 51706 12 Skin 0.20 protein_coding synonymous_variant LOW 393A>C Gly131Gly
M0073828 CCGFHDJC_00049 52072 4 Skin 0.07 protein_coding synonymous_variant LOW 759G>A Lys253Lys
M0073829 CCGFHDJC_00049 52154 10 Skin 0.17 protein_coding missense_variant MODERATE 841A>G Ser281Gly
M0073830 CCGFHDJC_00049 52511 8 Skin 0.14 protein_coding missense_variant MODERATE 1198A>G Asn400Asp
M0073831 CCGFHDJC_00049 52563 5 Skin 0.08 protein_coding missense_variant MODERATE 1250G>A Gly417Glu
M0073832 CCGFHDJC_00049 52601 10 Skin 0.17 protein_coding missense_variant MODERATE 1288A>G Asn430Asp
M0073833 CCGFHDJC_00049 52615 8 Skin 0.14 protein_coding synonymous_variant LOW 1302C>T Ala434Ala
M0073834 CCGFHDJC_00046 52746 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3502A>C None
M0073835 CCGFHDJC_00050 53217 9 Skin 0.15 protein_coding missense_variant MODERATE 194T>C Leu65Pro
M0073836 CCGFHDJC_00051 53462 3 Skin 0.05 protein_coding synonymous_variant LOW 396A>G Leu132Leu
M0073837 CCGFHDJC_00046 54024 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4780A>T None
M0073838 CCGFHDJC_00046 54039 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4795A>G None
M0073839 CCGFHDJC_00052 54355 6 Skin 0.10 protein_coding synonymous_variant LOW 462T>C Asn154Asn
M0073840 CCGFHDJC_00052 54424 7 Skin 0.12 protein_coding synonymous_variant LOW 393C>T Thr131Thr
M0073841 CCGFHDJC_00052 54457 4 Skin 0.07 protein_coding synonymous_variant LOW 360T>C Gly120Gly
M0073842 CCGFHDJC_00052 54785 6 Skin 0.10 protein_coding missense_variant MODERATE 32T>C Ile11Thr
M0073843 CCGFHDJC_00052 54792 5 Skin 0.08 protein_coding missense_variant MODERATE 25G>T Ala9Ser
M0073844 CCGFHDJC_00047 54854 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3958A>C None
M0073845 CCGFHDJC_00053 55513 4 Skin 0.07 protein_coding synonymous_variant LOW 471A>G Leu157Leu
M0073846 CCGFHDJC_00053 55522 6 Skin 0.10 protein_coding synonymous_variant LOW 480C>G Gly160Gly
M0073847 CCGFHDJC_00053 55579 3 Skin 0.05 protein_coding synonymous_variant LOW 537A>G Val179Val
M0073848 CCGFHDJC_00053 55597 6 Skin 0.10 protein_coding synonymous_variant LOW 555C>T Gly185Gly
M0073849 CCGFHDJC_00053 55600 6 Skin 0.10 protein_coding synonymous_variant LOW 558C>T Gly186Gly
M0073850 CCGFHDJC_00053 55720 6 Skin 0.10 protein_coding synonymous_variant LOW 678T>A Thr226Thr
M0073851 CCGFHDJC_00046 48945 3 Skin 0.05 protein_coding synonymous_variant LOW 300A>C Thr100Thr
M0073852 CCGFHDJC_00046 48987 7 Skin 0.12 protein_coding synonymous_variant LOW 258T>C Leu86Leu
M0073853 CCGFHDJC_00046 49017 7 Skin 0.12 protein_coding synonymous_variant LOW 228G>T Arg76Arg
M0073854 CCGFHDJC_00046 49203 5 Skin 0.08 protein_coding synonymous_variant LOW 42T>C Gly14Gly
M0073855 CCGFHDJC_00041 49530 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4647T>C None
M0073856 CCGFHDJC_00047 49601 6 Skin 0.10 protein_coding synonymous_variant LOW 1296G>A Leu432Leu
M0073857 CCGFHDJC_00047 49610 6 Skin 0.10 protein_coding synonymous_variant LOW 1287C>G Ala429Ala
M0073858 CCGFHDJC_00047 49727 5 Skin 0.08 protein_coding synonymous_variant LOW 1170C>T Asp390Asp
M0073859 CCGFHDJC_00047 49733 5 Skin 0.08 protein_coding synonymous_variant LOW 1164C>A Ala388Ala
M0073860 CCGFHDJC_00047 49754 6 Skin 0.10 protein_coding synonymous_variant LOW 1143T>A Pro381Pro
M0073861 CCGFHDJC_00047 49760 5 Skin 0.08 protein_coding synonymous_variant LOW 1137C>T Thr379Thr
M0073862 CCGFHDJC_00047 50132 3 Skin 0.05 protein_coding synonymous_variant LOW 765G>A Leu255Leu
M0073863 CCGFHDJC_00047 50330 6 Skin 0.10 protein_coding missense_variant MODERATE 567G>A Met189Ile
M0073864 CCGFHDJC_00047 50585 3 Skin 0.05 protein_coding synonymous_variant LOW 312T>C Ile104Ile
M0073865 CCGFHDJC_00047 50588 3 Skin 0.05 protein_coding synonymous_variant LOW 309C>A Pro103Pro
M0073866 CCGFHDJC_00047 50609 4 Skin 0.07 protein_coding synonymous_variant LOW 288G>A Pro96Pro
M0073867 CCGFHDJC_00048 51019 8 Skin 0.14 protein_coding missense_variant MODERATE 64T>C Ser22Pro
M0073868 CCGFHDJC_00048 51032 9 Skin 0.15 protein_coding synonymous_variant LOW 51G>A Gly17Gly
M0073869 CCGFHDJC_00048 51065 5 Skin 0.08 protein_coding synonymous_variant LOW 18A>G Leu6Leu
M0073870 CCGFHDJC_00051 53786 3 Skin 0.05 protein_coding synonymous_variant LOW 72A>G Thr24Thr
M0073871 CCGFHDJC_00051 53814 3 Skin 0.05 protein_coding missense_variant MODERATE 44C>T Ala15Val
M0073872 CCGFHDJC_00046 53858 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4614T>G None
M0073873 CCGFHDJC_00046 53957 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4713C>T None
M0073874 CCGFHDJC_00047 54938 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4042G>A None
M0073875 CCGFHDJC_00047 54940 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4044G>A None
M0073876 CCGFHDJC_00053 55255 3 Skin 0.05 protein_coding synonymous_variant LOW 213G>A Glu71Glu
M0073877 CCGFHDJC_00053 55654 4 Skin 0.07 protein_coding synonymous_variant LOW 612A>G Val204Val
M0073878 CCGFHDJC_00053 55942 4 Skin 0.07 protein_coding synonymous_variant LOW 900T>G Thr300Thr
M0073879 CCGFHDJC_00053 55966 3 Skin 0.05 protein_coding synonymous_variant LOW 924T>C Ser308Ser
M0073880 CCGFHDJC_00053 56020 3 Skin 0.05 protein_coding missense_variant MODERATE 978T>A Asp326Glu
M0073881 CCGFHDJC_00051 56995 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3138A>G None
M0073882 CCGFHDJC_00044 47069 5 Skin 0.08 protein_coding missense_variant MODERATE 135G>T Gln45His
M0073883 CCGFHDJC_00044 47105 5 Skin 0.08 protein_coding synonymous_variant LOW 99A>C Val33Val
M0073884 CCGFHDJC_00044 47113 5 Skin 0.08 protein_coding synonymous_variant LOW 91C>T Leu31Leu
M0073885 CCGFHDJC_00044 47161 6 Skin 0.10 protein_coding missense_variant MODERATE 43G>A Val15Met
M0073886 CCGFHDJC_00044 47183 6 Skin 0.10 protein_coding missense_variant MODERATE 21A>T Lys7Asn
M0073887 CCGFHDJC_00044 47192 6 Skin 0.10 protein_coding missense_variant MODERATE 12T>A Asp4Glu
M0073888 CCGFHDJC_00044 47201 5 Skin 0.08 protein_coding start_lost HIGH 3G>T Met1?
M0073889 CCGFHDJC_00038 47301 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4915A>G None
M0073890 CCGFHDJC_00038 47336 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4950C>T None
M0073891 CCGFHDJC_00045 47433 10 Skin 0.17 protein_coding synonymous_variant LOW 42T>C Gly14Gly
M0073892 CCGFHDJC_00045 47615 5 Skin 0.08 protein_coding missense_variant MODERATE 224A>G His75Arg
M0073893 CCGFHDJC_00045 47625 6 Skin 0.10 protein_coding synonymous_variant LOW 234C>T Gly78Gly
M0073894 CCGFHDJC_00045 47631 6 Skin 0.10 protein_coding synonymous_variant LOW 240T>C Ile80Ile
M0073895 CCGFHDJC_00045 47653 4 Skin 0.07 protein_coding missense_variant MODERATE 262A>C Ile88Leu
M0073896 CCGFHDJC_00045 47707 6 Skin 0.10 protein_coding missense_variant MODERATE 316C>A Gln106Lys
M0073897 CCGFHDJC_00041 47748 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2865A>G None
M0073898 CCGFHDJC_00041 47789 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -2906T>C None
M0073899 CCGFHDJC_00041 47822 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2939A>G None
M0073900 CCGFHDJC_00041 47844 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2961C>T None
M0073901 CCGFHDJC_00041 47902 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3019T>C None
M0073902 CCGFHDJC_00046 48216 5 Skin 0.08 protein_coding synonymous_variant LOW 1029T>C Ser343Ser
M0073903 CCGFHDJC_00046 48255 6 Skin 0.10 protein_coding synonymous_variant LOW 990G>T Arg330Arg
M0073904 CCGFHDJC_00046 48269 6 Skin 0.10 protein_coding missense_variant MODERATE 976T>C Ser326Pro
M0073905 CCGFHDJC_00046 48369 4 Skin 0.07 protein_coding synonymous_variant LOW 876G>T Gly292Gly
M0073906 CCGFHDJC_00046 48463 4 Skin 0.07 protein_coding missense_variant MODERATE 782A>G Asn261Ser
M0073907 CCGFHDJC_00046 48486 3 Skin 0.05 protein_coding synonymous_variant LOW 759A>G Pro253Pro
M0073908 CCGFHDJC_00046 48495 3 Skin 0.05 protein_coding synonymous_variant LOW 750G>A Thr250Thr
M0073909 CCGFHDJC_00046 48497 3 Skin 0.05 protein_coding missense_variant MODERATE 748A>G Thr250Ala
M0073910 CCGFHDJC_00046 48519 3 Skin 0.05 protein_coding synonymous_variant LOW 726A>G Glu242Glu
M0073911 CCGFHDJC_00046 48660 5 Skin 0.08 protein_coding synonymous_variant LOW 585G>A Lys195Lys
M0073912 CCGFHDJC_00046 48750 4 Skin 0.07 protein_coding synonymous_variant LOW 495G>A Ser165Ser
M0073913 CCGFHDJC_00046 48804 4 Skin 0.07 protein_coding synonymous_variant LOW 441A>T Ser147Ser
M0073914 CCGFHDJC_00046 49079 3 Skin 0.05 protein_coding missense_variant MODERATE 166C>A Leu56Met
M0073915 CCGFHDJC_00046 49116 4 Skin 0.07 protein_coding synonymous_variant LOW 129T>C Val43Val
M0073916 CCGFHDJC_00046 49134 4 Skin 0.07 protein_coding synonymous_variant LOW 111G>A Val37Val
M0073917 CCGFHDJC_00046 49140 4 Skin 0.07 protein_coding synonymous_variant LOW 105T>C Val35Val
M0073918 CCGFHDJC_00046 49155 3 Skin 0.05 protein_coding synonymous_variant LOW 90C>T Gly30Gly
M0073919 CCGFHDJC_00046 49179 4 Skin 0.07 protein_coding synonymous_variant LOW 66T>C Asn22Asn
M0073920 CCGFHDJC_00044 46890 7 Skin 0.12 protein_coding missense_variant MODERATE 314A>G Asp105Gly
M0073921 CCGFHDJC_00044 46916 4 Skin 0.07 protein_coding synonymous_variant LOW 288C>A Thr96Thr
M0073922 CCGFHDJC_00044 46918 4 Skin 0.07 protein_coding missense_variant MODERATE 286A>G Thr96Ala
M0073923 CCGFHDJC_00044 46923 4 Skin 0.07 protein_coding missense_variant MODERATE 281C>G Thr94Ser
M0073924 CCGFHDJC_00044 46931 4 Skin 0.07 protein_coding synonymous_variant LOW 273C>A Val91Val
M0073925 CCGFHDJC_00041 47976 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3093C>T None
M0073926 CCGFHDJC_00018 16541 5 Skin 0.08 protein_coding synonymous_variant LOW 285A>G Leu95Leu
M0073927 CCGFHDJC_00018 16563 5 Skin 0.08 protein_coding missense_variant MODERATE 307T>C Tyr103His
M0073928 CCGFHDJC_00018 16595 5 Skin 0.08 protein_coding synonymous_variant LOW 339G>A Gly113Gly
M0073929 CCGFHDJC_00018 16618 5 Skin 0.08 protein_coding missense_variant MODERATE 362T>C Ile121Thr
M0073930 CCGFHDJC_00018 16633 5 Skin 0.08 protein_coding missense_variant MODERATE 377A>C Tyr126Ser
M0073931 CCGFHDJC_00018 16657 5 Skin 0.08 protein_coding missense_variant MODERATE 401G>A Arg134His
M0073932 CCGFHDJC_00018 16688 11 Skin 0.19 protein_coding synonymous_variant LOW 432G>A Glu144Glu
M0073933 CCGFHDJC_00018 16689 5 Skin 0.08 protein_coding missense_variant MODERATE 433C>T His145Tyr
M0073934 CCGFHDJC_00018 16769 4 Skin 0.07 protein_coding synonymous_variant LOW 513T>C Asn171Asn
M0073935 CCGFHDJC_00018 16775 10 Skin 0.17 protein_coding missense_variant MODERATE 519G>T Met173Ile
M0073936 CCGFHDJC_00018 16856 11 Skin 0.19 protein_coding synonymous_variant LOW 600G>T Gly200Gly
M0073937 CCGFHDJC_00018 16871 5 Skin 0.08 protein_coding missense_variant MODERATE 615G>A Met205Ile
M0073938 CCGFHDJC_00018 16893 9 Skin 0.15 protein_coding missense_variant MODERATE 637A>G Asn213Asp
M0073939 CCGFHDJC_00018 16906 4 Skin 0.07 protein_coding missense_variant MODERATE 650C>A Ala217Glu
M0073940 CCGFHDJC_00018 17018 6 Skin 0.10 protein_coding synonymous_variant LOW 762T>C Tyr254Tyr
M0073941 CCGFHDJC_00018 17039 9 Skin 0.15 protein_coding synonymous_variant LOW 783T>C His261His
M0073942 CCGFHDJC_00018 17069 9 Skin 0.15 protein_coding synonymous_variant LOW 813C>T Tyr271Tyr
M0073943 CCGFHDJC_00019 17289 8 Skin 0.14 protein_coding synonymous_variant LOW 60C>T Val20Val
M0073944 CCGFHDJC_00019 17310 12 Skin 0.20 protein_coding synonymous_variant LOW 81G>C Arg27Arg
M0073945 CCGFHDJC_00020 18758 7 Skin 0.12 protein_coding missense_variant MODERATE 298G>A Asp100Asn
M0073946 CCGFHDJC_00020 18923 14 Skin 0.24 protein_coding missense_variant MODERATE 133C>T Pro45Ser
M0073947 CCGFHDJC_00021 19756 3 Skin 0.05 protein_coding synonymous_variant LOW 294A>G Gln98Gln
M0073948 CCGFHDJC_00021 19768 3 Skin 0.05 protein_coding synonymous_variant LOW 282T>A Ser94Ser
M0073949 CCGFHDJC_00015 14306 4 Skin 0.07 protein_coding synonymous_variant LOW 201G>T Gly67Gly
M0073950 CCGFHDJC_00016 15046 3 Skin 0.05 protein_coding synonymous_variant LOW 318T>C Val106Val
M0073951 CCGFHDJC_00016 15110 5 Skin 0.08 protein_coding missense_variant MODERATE 254T>C Val85Ala
M0073952 CCGFHDJC_00016 15314 4 Skin 0.07 protein_coding missense_variant MODERATE 50A>G His17Arg
M0073953 CCGFHDJC_00016 15325 4 Skin 0.07 protein_coding synonymous_variant LOW 39G>A Ala13Ala
M0073954 CCGFHDJC_00016 15327 4 Skin 0.07 protein_coding missense_variant MODERATE 37G>A Ala13Thr
M0073955 CCGFHDJC_00017 15464 7 Skin 0.12 protein_coding synonymous_variant LOW 711T>C Gly237Gly
M0073956 CCGFHDJC_00017 15506 6 Skin 0.10 protein_coding synonymous_variant LOW 669C>T Arg223Arg
M0073957 CCGFHDJC_00017 15515 5 Skin 0.08 protein_coding synonymous_variant LOW 660T>C Gly220Gly
M0073958 CCGFHDJC_00017 15566 8 Skin 0.14 protein_coding synonymous_variant LOW 609A>C Gly203Gly
M0073959 CCGFHDJC_00017 15650 5 Skin 0.08 protein_coding synonymous_variant LOW 525T>G Ala175Ala
M0073960 CCGFHDJC_00017 16055 6 Skin 0.10 protein_coding synonymous_variant LOW 120G>A Leu40Leu
M0073961 CCGFHDJC_00018 16403 7 Skin 0.12 protein_coding synonymous_variant LOW 147C>T Asp49Asp
M0073962 CCGFHDJC_00018 16416 6 Skin 0.10 protein_coding missense_variant MODERATE 160G>A Ala54Thr
M0073963 CCGFHDJC_00018 16419 4 Skin 0.07 protein_coding missense_variant MODERATE 163G>A Asp55Asn
M0073964 CCGFHDJC_00018 16422 4 Skin 0.07 protein_coding missense_variant MODERATE 166C>T Pro56Ser
M0073965 CCGFHDJC_00018 16970 4 Skin 0.07 protein_coding synonymous_variant LOW 714T>G Val238Val
M0073966 CCGFHDJC_00017 20447 11 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4273G>A None
M0073967 CCGFHDJC_00017 20455 12 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -4281A>G None
M0073968 CCGFHDJC_00023 20649 10 Skin 0.17 protein_coding missense_variant MODERATE 139A>G Ser47Gly
M0073969 CCGFHDJC_00023 21093 14 Skin 0.24 protein_coding missense_variant MODERATE 583A>G Lys195Glu
M0073970 CCGFHDJC_00023 21327 11 Skin 0.19 protein_coding missense_variant MODERATE 817T>C Phe273Leu
M0073971 CCGFHDJC_00023 21509 6 Skin 0.10 protein_coding synonymous_variant LOW 999G>A Val333Val
M0073972 CCGFHDJC_00024 22818 3 Skin 0.05 protein_coding missense_variant MODERATE 403G>A Ala135Thr
M0073973 CCGFHDJC_00019 18009 10 Skin 0.17 protein_coding synonymous_variant LOW 780C>T Ala260Ala
M0073974 CCGFHDJC_00021 19222 16 Skin 0.27 protein_coding synonymous_variant LOW 828A>G Ser276Ser
M0073975 CCGFHDJC_00021 19336 9 Skin 0.15 protein_coding synonymous_variant LOW 714A>G Ser238Ser
M0073976 CCGFHDJC_00021 19723 11 Skin 0.19 protein_coding synonymous_variant LOW 327T>A Ala109Ala
M0073977 CCGFHDJC_00021 19798 4 Skin 0.07 protein_coding synonymous_variant LOW 252T>C Asn84Asn
M0073978 CCGFHDJC_00021 19840 10 Skin 0.17 protein_coding synonymous_variant LOW 210G>A Ser70Ser
M0073979 CCGFHDJC_00021 19861 10 Skin 0.17 protein_coding synonymous_variant LOW 189T>C Ile63Ile
M0073980 CCGFHDJC_00021 19873 3 Skin 0.05 protein_coding missense_variant MODERATE 177C>A Ser59Arg
M0073981 CCGFHDJC_00021 19903 10 Skin 0.17 protein_coding synonymous_variant LOW 147C>G Ala49Ala
M0073982 CCGFHDJC_00016 20266 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4903T>A None
M0073983 CCGFHDJC_00046 54076 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4832C>T None
M0073984 CCGFHDJC_00046 54102 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4858C>A None
M0073985 CCGFHDJC_00052 54280 4 Skin 0.07 protein_coding synonymous_variant LOW 537T>A Gly179Gly
M0073986 CCGFHDJC_00052 54316 4 Skin 0.07 protein_coding synonymous_variant LOW 501C>T Thr167Thr
M0073987 CCGFHDJC_00052 54325 3 Skin 0.05 protein_coding missense_variant MODERATE 492T>G Ile164Met
M0073988 CCGFHDJC_00052 54394 3 Skin 0.05 protein_coding synonymous_variant LOW 423G>A Pro141Pro
M0073989 CCGFHDJC_00052 54442 3 Skin 0.05 protein_coding synonymous_variant LOW 375C>T Phe125Phe
M0073990 CCGFHDJC_00052 54510 4 Skin 0.07 protein_coding missense_variant MODERATE 307G>A Val103Ile
M0073991 CCGFHDJC_00052 54526 3 Skin 0.05 protein_coding synonymous_variant LOW 291C>T His97His
M0073992 CCGFHDJC_00052 54528 3 Skin 0.05 protein_coding missense_variant MODERATE 289C>T His97Tyr
M0073993 CCGFHDJC_00052 54544 4 Skin 0.07 protein_coding synonymous_variant LOW 273G>A Leu91Leu
M0073994 CCGFHDJC_00052 54592 3 Skin 0.05 protein_coding synonymous_variant LOW 225T>C Asp75Asp
M0073995 CCGFHDJC_00052 54610 3 Skin 0.05 protein_coding synonymous_variant LOW 207G>A Val69Val
M0073996 CCGFHDJC_00052 54613 3 Skin 0.05 protein_coding synonymous_variant LOW 204C>T Asp68Asp
M0073997 CCGFHDJC_00052 54641 3 Skin 0.05 protein_coding missense_variant MODERATE 176A>C Asp59Ala
M0073998 CCGFHDJC_00052 54644 4 Skin 0.07 protein_coding missense_variant MODERATE 173A>C Asp58Ala
M0073999 CCGFHDJC_00047 54825 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3929A>G None
M0074000 CCGFHDJC_00047 54857 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3961G>A None
M0074001 CCGFHDJC_00047 54880 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3984T>C None
M0074002 CCGFHDJC_00047 54908 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4012C>T None
M0074003 CCGFHDJC_00047 54948 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4052T>C None
M0074004 CCGFHDJC_00047 54951 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4055C>T None
M0074005 CCGFHDJC_00047 54971 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4075T>C None
M0074006 CCGFHDJC_00047 54972 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4076C>T None
M0074007 CCGFHDJC_00047 54996 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4100G>T None
M0074008 CCGFHDJC_00053 55106 3 Skin 0.05 protein_coding missense_variant MODERATE 64C>A Gln22Lys
M0074009 CCGFHDJC_00053 55300 3 Skin 0.05 protein_coding synonymous_variant LOW 258T>C Gly86Gly
M0074010 CCGFHDJC_00053 55615 3 Skin 0.05 protein_coding synonymous_variant LOW 573A>C Ala191Ala
M0074011 CCGFHDJC_00053 55849 3 Skin 0.05 protein_coding synonymous_variant LOW 807T>C Gly269Gly
M0074012 CCGFHDJC_00053 55870 3 Skin 0.05 protein_coding synonymous_variant LOW 828C>A Ser276Ser
M0074013 CCGFHDJC_00021 19381 9 Skin 0.15 protein_coding synonymous_variant LOW 669C>A Thr223Thr
M0074014 CCGFHDJC_00021 19396 9 Skin 0.15 protein_coding synonymous_variant LOW 654T>C Phe218Phe
M0074015 CCGFHDJC_00021 19426 9 Skin 0.15 protein_coding synonymous_variant LOW 624C>G Ala208Ala
M0074016 CCGFHDJC_00021 19696 9 Skin 0.15 protein_coding synonymous_variant LOW 354G>T Val118Val
M0074017 CCGFHDJC_00021 19699 9 Skin 0.15 protein_coding synonymous_variant LOW 351C>T His117His
M0074018 CCGFHDJC_00021 19708 8 Skin 0.14 protein_coding synonymous_variant LOW 342A>C Thr114Thr
M0074019 CCGFHDJC_00021 19759 7 Skin 0.12 protein_coding synonymous_variant LOW 291A>G Lys97Lys
M0074020 CCGFHDJC_00021 19816 6 Skin 0.10 protein_coding synonymous_variant LOW 234T>C Gly78Gly
M0074021 CCGFHDJC_00021 19915 11 Skin 0.19 protein_coding synonymous_variant LOW 135C>A Gly45Gly
M0074022 CCGFHDJC_00021 19927 9 Skin 0.15 protein_coding synonymous_variant LOW 123T>G Gly41Gly
M0074023 CCGFHDJC_00021 19978 9 Skin 0.15 protein_coding synonymous_variant LOW 72C>T Ser24Ser
M0074024 CCGFHDJC_00021 19987 8 Skin 0.14 protein_coding synonymous_variant LOW 63C>A Leu21Leu
M0074025 CCGFHDJC_00021 20007 8 Skin 0.14 protein_coding missense_variant MODERATE 43A>G Ile15Val
M0074026 CCGFHDJC_00021 20046 8 Skin 0.14 protein_coding synonymous_variant LOW 4T>C Leu2Leu
M0074027 CCGFHDJC_00016 20078 7 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4715C>T None
M0074028 CCGFHDJC_00016 20088 7 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4725A>C None
M0074029 CCGFHDJC_00016 20186 12 Skin 0.20 protein_coding upstream_gene_variant MODIFIER -4823A>C None
M0074030 CCGFHDJC_00016 20199 11 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4836C>A None
M0074031 CCGFHDJC_00016 20210 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4847C>T None
M0074032 CCGFHDJC_00016 20265 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4902G>A None
M0074033 CCGFHDJC_00017 20404 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4230A>G None
M0074034 CCGFHDJC_00017 20449 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4275C>T None
M0074035 CCGFHDJC_00023 20801 6 Skin 0.10 protein_coding synonymous_variant LOW 291C>T Ile97Ile
M0074036 CCGFHDJC_00023 20813 6 Skin 0.10 protein_coding synonymous_variant LOW 303T>C Ser101Ser
M0074037 CCGFHDJC_00023 20820 7 Skin 0.12 protein_coding synonymous_variant LOW 310C>T Leu104Leu
M0074038 CCGFHDJC_00023 20846 7 Skin 0.12 protein_coding synonymous_variant LOW 336T>G Gly112Gly
M0074039 CCGFHDJC_00023 20906 9 Skin 0.15 protein_coding synonymous_variant LOW 396C>T Asn132Asn
M0074040 CCGFHDJC_00023 20914 9 Skin 0.15 protein_coding missense_variant MODERATE 404G>A Arg135Lys
M0074041 CCGFHDJC_00020 22054 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2999C>T None
M0074042 CCGFHDJC_00027 26670 3 Skin 0.05 protein_coding missense_variant MODERATE 1438A>C Thr480Pro
M0074043 CCGFHDJC_00030 31236 3 Skin 0.05 protein_coding missense_variant MODERATE 770C>A Ala257Glu
M0074044 CCGFHDJC_00047 50732 3 Skin 0.05 protein_coding synonymous_variant LOW 165C>A Leu55Leu
M0074045 CCGFHDJC_00043 50971 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4322C>T None
M0074046 CCGFHDJC_00038 46692 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4306A>G None
M0074047 CCGFHDJC_00045 47406 5 Skin 0.08 protein_coding synonymous_variant LOW 15C>T Asn5Asn
M0074048 CCGFHDJC_00045 47417 5 Skin 0.08 protein_coding missense_variant MODERATE 26A>G Asn9Ser
M0074049 CCGFHDJC_00047 50516 7 Skin 0.12 protein_coding synonymous_variant LOW 381T>G Ala127Ala
M0074050 CCGFHDJC_00046 54111 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4867C>T None
M0074051 CCGFHDJC_00012 11422 4 Skin 0.07 protein_coding synonymous_variant LOW 180C>A Ser60Ser
M0074052 CCGFHDJC_00012 11520 4 Skin 0.07 protein_coding missense_variant MODERATE 82C>A His28Asn
M0074053 CCGFHDJC_00007 11627 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4680G>A None
M0074054 CCGFHDJC_00007 11634 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4687A>G None
M0074055 CCGFHDJC_00013 11827 4 Skin 0.07 protein_coding synonymous_variant LOW 22T>C Leu8Leu
M0074056 CCGFHDJC_00013 12063 3 Skin 0.05 protein_coding synonymous_variant LOW 258T>C Ala86Ala
M0074057 CCGFHDJC_00013 12198 3 Skin 0.05 protein_coding synonymous_variant LOW 393G>A Lys131Lys
M0074058 CCGFHDJC_00042 45420 3 Skin 0.05 protein_coding synonymous_variant LOW 537G>C Gly179Gly
M0074059 CCGFHDJC_00042 45686 3 Skin 0.05 protein_coding missense_variant MODERATE 271A>G Ile91Val
M0074060 CCGFHDJC_00037 46077 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4698G>A None
M0074061 CCGFHDJC_00037 46079 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4700C>G None
M0074062 CCGFHDJC_00037 46103 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4724A>G None
M0074063 CCGFHDJC_00043 46146 3 Skin 0.05 protein_coding missense_variant MODERATE 504A>C Glu168Asp
M0074064 CCGFHDJC_00043 46542 3 Skin 0.05 protein_coding synonymous_variant LOW 108A>G Thr36Thr
M0074065 CCGFHDJC_00043 46545 3 Skin 0.05 protein_coding synonymous_variant LOW 105C>A Leu35Leu
M0074066 CCGFHDJC_00044 46915 3 Skin 0.05 protein_coding missense_variant MODERATE 289T>A Cys97Ser
M0074067 CCGFHDJC_00044 46940 3 Skin 0.05 protein_coding synonymous_variant LOW 264C>T Thr88Thr
M0074068 CCGFHDJC_00044 46945 3 Skin 0.05 protein_coding synonymous_variant LOW 259C>T Leu87Leu
M0074069 CCGFHDJC_00044 46947 3 Skin 0.05 protein_coding missense_variant MODERATE 257C>T Thr86Met
M0074070 CCGFHDJC_00044 46952 4 Skin 0.07 protein_coding missense_variant MODERATE 252A>G Ile84Met
M0074071 CCGFHDJC_00044 46996 3 Skin 0.05 protein_coding missense_variant MODERATE 208T>A Leu70Met
M0074072 CCGFHDJC_00047 49678 3 Skin 0.05 protein_coding synonymous_variant LOW 1219T>C Leu407Leu
M0074073 CCGFHDJC_00047 50474 4 Skin 0.07 protein_coding synonymous_variant LOW 423T>G Thr141Thr
M0074074 CCGFHDJC_00047 50723 3 Skin 0.05 protein_coding synonymous_variant LOW 174C>T Asp58Asp
M0074075 CCGFHDJC_00047 50866 3 Skin 0.05 protein_coding missense_variant MODERATE 31A>G Asn11Asp
M0074076 CCGFHDJC_00043 50970 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4321A>G None
M0074077 CCGFHDJC_00037 45968 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4589A>G None
M0074078 CCGFHDJC_00047 49853 3 Skin 0.05 protein_coding synonymous_variant LOW 1044A>G Gly348Gly
M0074079 CCGFHDJC_00048 51018 4 Skin 0.07 protein_coding missense_variant MODERATE 65C>T Ser22Phe
M0074080 CCGFHDJC_00046 52774 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3530C>T None
M0074081 CCGFHDJC_00018 16394 5 Skin 0.08 protein_coding missense_variant MODERATE 138G>T Met46Ile
M0074082 CCGFHDJC_00020 22163 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3108C>T None
M0074083 CCGFHDJC_00020 22182 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3127A>G None
M0074084 CCGFHDJC_00016 15127 3 Skin 0.05 protein_coding synonymous_variant LOW 237C>T Asp79Asp
M0074085 CCGFHDJC_00016 15207 4 Skin 0.07 protein_coding missense_variant MODERATE 157A>G Ile53Val
M0074086 CCGFHDJC_00017 15425 4 Skin 0.07 protein_coding synonymous_variant LOW 750G>A Ala250Ala
M0074087 CCGFHDJC_00017 15524 3 Skin 0.05 protein_coding synonymous_variant LOW 651G>A Leu217Leu
M0074088 CCGFHDJC_00017 15572 3 Skin 0.05 protein_coding synonymous_variant LOW 603A>G Gly201Gly
M0074089 CCGFHDJC_00017 15662 3 Skin 0.05 protein_coding synonymous_variant LOW 513G>A Ala171Ala
M0074090 CCGFHDJC_00017 15686 5 Skin 0.08 protein_coding synonymous_variant LOW 489C>T Arg163Arg
M0074091 CCGFHDJC_00017 15791 3 Skin 0.05 protein_coding missense_variant MODERATE 384T>G Ile128Met
M0074092 CCGFHDJC_00012 16210 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4609G>A None
M0074093 CCGFHDJC_00018 16295 5 Skin 0.08 protein_coding synonymous_variant LOW 39A>G Thr13Thr
M0074094 CCGFHDJC_00018 16334 5 Skin 0.08 protein_coding synonymous_variant LOW 78T>C Ile26Ile
M0074095 CCGFHDJC_00018 16454 3 Skin 0.05 protein_coding synonymous_variant LOW 198G>A Thr66Thr
M0074096 CCGFHDJC_00018 16511 3 Skin 0.05 protein_coding synonymous_variant LOW 255T>G Thr85Thr
M0074097 CCGFHDJC_00018 16517 3 Skin 0.05 protein_coding synonymous_variant LOW 261C>T Ile87Ile
M0074098 CCGFHDJC_00018 16670 4 Skin 0.07 protein_coding synonymous_variant LOW 414A>G Gln138Gln
M0074099 CCGFHDJC_00018 16678 4 Skin 0.07 protein_coding missense_variant MODERATE 422G>A Arg141His
M0074100 CCGFHDJC_00018 16691 4 Skin 0.07 protein_coding synonymous_variant LOW 435T>C His145His
M0074101 CCGFHDJC_00018 16764 5 Skin 0.08 protein_coding missense_variant MODERATE 508A>G Ile170Val
M0074102 CCGFHDJC_00018 16781 5 Skin 0.08 protein_coding synonymous_variant LOW 525A>T Ala175Ala
M0074103 CCGFHDJC_00018 16793 5 Skin 0.08 protein_coding synonymous_variant LOW 537T>C Asn179Asn
M0074104 CCGFHDJC_00018 16815 5 Skin 0.08 protein_coding missense_variant MODERATE 559T>C Ser187Pro
M0074105 CCGFHDJC_00018 16817 5 Skin 0.08 protein_coding synonymous_variant LOW 561G>A Ser187Ser
M0074106 CCGFHDJC_00018 16838 5 Skin 0.08 protein_coding synonymous_variant LOW 582G>A Thr194Thr
M0074107 CCGFHDJC_00018 16889 3 Skin 0.05 protein_coding synonymous_variant LOW 633G>A Leu211Leu
M0074108 CCGFHDJC_00018 16892 3 Skin 0.05 protein_coding synonymous_variant LOW 636T>C Pro212Pro
M0074109 CCGFHDJC_00018 16973 3 Skin 0.05 protein_coding missense_variant MODERATE 717G>A Met239Ile
M0074110 CCGFHDJC_00018 17048 3 Skin 0.05 protein_coding synonymous_variant LOW 792C>G Thr264Thr
M0074111 CCGFHDJC_00019 17259 3 Skin 0.05 protein_coding missense_variant MODERATE 30G>T Met10Ile
M0074112 CCGFHDJC_00019 17409 5 Skin 0.08 protein_coding synonymous_variant LOW 180C>T Ile60Ile
M0074113 CCGFHDJC_00019 17430 5 Skin 0.08 protein_coding synonymous_variant LOW 201C>T Gly67Gly
M0074114 CCGFHDJC_00019 17445 4 Skin 0.07 protein_coding synonymous_variant LOW 216A>C Thr72Thr
M0074115 CCGFHDJC_00019 17652 4 Skin 0.07 protein_coding synonymous_variant LOW 423T>C Asp141Asp
M0074116 CCGFHDJC_00019 17664 4 Skin 0.07 protein_coding synonymous_variant LOW 435C>A Ala145Ala
M0074117 CCGFHDJC_00019 17712 3 Skin 0.05 protein_coding missense_variant MODERATE 483A>G Ile161Met
M0074118 CCGFHDJC_00019 17790 5 Skin 0.08 protein_coding synonymous_variant LOW 561T>C Thr187Thr
M0074119 CCGFHDJC_00019 17809 5 Skin 0.08 protein_coding missense_variant MODERATE 580T>C Ser194Pro
M0074120 CCGFHDJC_00019 17810 5 Skin 0.08 protein_coding stop_gained HIGH 581C>A Ser194*
M0074121 CCGFHDJC_00019 17934 6 Skin 0.10 protein_coding synonymous_variant LOW 705C>A Ser235Ser
M0074122 CCGFHDJC_00019 17973 6 Skin 0.10 protein_coding synonymous_variant LOW 744G>A Thr248Thr
M0074123 CCGFHDJC_00019 17976 6 Skin 0.10 protein_coding synonymous_variant LOW 747A>G Arg249Arg
M0074124 CCGFHDJC_00019 17991 6 Skin 0.10 protein_coding synonymous_variant LOW 762T>C Tyr254Tyr
M0074125 CCGFHDJC_00019 18013 6 Skin 0.10 protein_coding synonymous_variant LOW 784C>T Leu262Leu
M0074126 CCGFHDJC_00019 18033 6 Skin 0.10 protein_coding synonymous_variant LOW 804A>G Pro268Pro
M0074127 CCGFHDJC_00020 18168 4 Skin 0.07 protein_coding synonymous_variant LOW 888A>G Val296Val
M0074128 CCGFHDJC_00020 18173 4 Skin 0.07 protein_coding missense_variant MODERATE 883G>A Val295Ile
M0074129 CCGFHDJC_00020 18282 4 Skin 0.07 protein_coding missense_variant MODERATE 774T>G Asp258Glu
M0074130 CCGFHDJC_00020 18285 4 Skin 0.07 protein_coding synonymous_variant LOW 771T>A Thr257Thr
M0074131 CCGFHDJC_00020 18744 6 Skin 0.10 protein_coding synonymous_variant LOW 312T>C Thr104Thr
M0074132 CCGFHDJC_00020 18745 6 Skin 0.10 protein_coding missense_variant MODERATE 311C>A Thr104Asn
M0074133 CCGFHDJC_00020 18756 6 Skin 0.10 protein_coding synonymous_variant LOW 300C>T Asp100Asp
M0074134 CCGFHDJC_00020 18783 7 Skin 0.12 protein_coding synonymous_variant LOW 273G>A Leu91Leu
M0074135 CCGFHDJC_00020 18818 6 Skin 0.10 protein_coding missense_variant MODERATE 238A>G Ile80Val
M0074136 CCGFHDJC_00020 18837 7 Skin 0.12 protein_coding synonymous_variant LOW 219G>A Glu73Glu
M0074137 CCGFHDJC_00020 18840 3 Skin 0.05 protein_coding synonymous_variant LOW 216A>T Arg72Arg
M0074138 CCGFHDJC_00020 18841 6 Skin 0.10 protein_coding missense_variant MODERATE 215G>A Arg72Gln
M0074139 CCGFHDJC_00020 18850 6 Skin 0.10 protein_coding missense_variant MODERATE 206G>A Ser69Asn
M0074140 CCGFHDJC_00020 18891 6 Skin 0.10 protein_coding missense_variant MODERATE 165A>C Lys55Asn
M0074141 CCGFHDJC_00020 18896 6 Skin 0.10 protein_coding missense_variant MODERATE 160C>G His54Asp
M0074142 CCGFHDJC_00020 18942 7 Skin 0.12 protein_coding synonymous_variant LOW 114T>G Thr38Thr
M0074143 CCGFHDJC_00020 19026 8 Skin 0.14 protein_coding synonymous_variant LOW 30A>T Ala10Ala
M0074144 CCGFHDJC_00015 19058 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4552T>C None
M0074145 CCGFHDJC_00015 19091 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4585G>A None
M0074146 CCGFHDJC_00015 19096 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4590C>A None
M0074147 CCGFHDJC_00015 19113 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4607A>T None
M0074148 CCGFHDJC_00015 19174 8 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4668G>A None
M0074149 CCGFHDJC_00021 19348 7 Skin 0.12 protein_coding synonymous_variant LOW 702C>T Gly234Gly
M0074150 CCGFHDJC_00021 19773 3 Skin 0.05 protein_coding missense_variant MODERATE 277G>A Ala93Thr
M0074151 CCGFHDJC_00017 20420 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4246C>T None
M0074152 CCGFHDJC_00023 21266 5 Skin 0.08 protein_coding synonymous_variant LOW 756T>C Val252Val
M0074153 CCGFHDJC_00023 21275 5 Skin 0.08 protein_coding synonymous_variant LOW 765C>T His255His
M0074154 CCGFHDJC_00023 21440 6 Skin 0.10 protein_coding synonymous_variant LOW 930T>C His310His
M0074155 CCGFHDJC_00023 21482 5 Skin 0.08 protein_coding missense_variant MODERATE 972T>G Phe324Leu
M0074156 CCGFHDJC_00023 21545 5 Skin 0.08 protein_coding synonymous_variant LOW 1035A>G Ala345Ala
M0074157 CCGFHDJC_00023 21587 6 Skin 0.10 protein_coding synonymous_variant LOW 1077T>C Ile359Ile
M0074158 CCGFHDJC_00023 21608 6 Skin 0.10 protein_coding synonymous_variant LOW 1098T>C Tyr366Tyr
M0074159 CCGFHDJC_00025 29058 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3865C>A None
M0074160 CCGFHDJC_00030 31475 3 Skin 0.05 protein_coding synonymous_variant LOW 531A>G Gly177Gly
M0074161 CCGFHDJC_00030 31483 3 Skin 0.05 protein_coding missense_variant MODERATE 523A>G Asn175Asp
M0074162 CCGFHDJC_00030 31517 3 Skin 0.05 protein_coding synonymous_variant LOW 489A>G Glu163Glu
M0074163 CCGFHDJC_00030 31541 3 Skin 0.05 protein_coding synonymous_variant LOW 465T>C Ile155Ile
M0074164 CCGFHDJC_00030 31565 3 Skin 0.05 protein_coding synonymous_variant LOW 441T>A Arg147Arg
M0074165 CCGFHDJC_00031 32247 3 Skin 0.05 protein_coding synonymous_variant LOW 883T>C Leu295Leu
M0074166 CCGFHDJC_00046 48132 5 Skin 0.08 protein_coding synonymous_variant LOW 1113C>T Leu371Leu
M0074167 CCGFHDJC_00019 17548 3 Skin 0.05 protein_coding missense_variant MODERATE 319A>C Asn107His
M0074168 CCGFHDJC_00015 19114 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4608G>A None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
CCGFHDJC_00024 PHI:3418 ssp 75.3 3.8e-299 1 747 0.9894 0.9868 nematodes urinary tract infection lipase activity reduced virulence
CCGFHDJC_00033 PHI:6629 brnQ1 72.7 1.5e-181 11 457 0.9675 0.9911 rodents skin infection; food poisoning; respiratory disease BCAA transporter unaffected pathogenicity
CCGFHDJC_00050 PHI:7637 CspA 76.2 7e-24 1 63 0.9545 0.9545 bony fishes listeriosis cold shock protein reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
CCGFHDJC_00049 QKH82470.1|GT2 99.8 0 1 468 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term