Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C3097
  Reference Plasmid   MET0136_bin.1__k81_5626
  Reference Plasmid Size   17052
  Reference Plasmid GC Content   0.27
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0074658 HGMCELJO_00008 8043 11 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -3628T>C None
M0074659 HGMCELJO_00013 8328 48 Skin 0.91 protein_coding missense_variant MODERATE 877A>C Ile293Leu
M0074660 HGMCELJO_00013 8713 17 Skin 0.32 protein_coding synonymous_variant LOW 492T>C Phe164Phe
M0074661 HGMCELJO_00013 8725 4 Skin 0.08 protein_coding synonymous_variant LOW 480A>T Ala160Ala
M0074662 HGMCELJO_00013 8755 9 Skin 0.17 protein_coding synonymous_variant LOW 450A>G Lys150Lys
M0074663 HGMCELJO_00012 9482 49 Skin 0.92 protein_coding upstream_gene_variant MODIFIER -2585C>T None
M0074664 HGMCELJO_00012 10515 9 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3618A>G None
M0074665 HGMCELJO_00004 7011 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4512G>A None
M0074666 HGMCELJO_00004 7067 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4568C>A None
M0074667 HGMCELJO_00004 7072 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4573C>T None
M0074668 HGMCELJO_00004 7077 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4578A>G None
M0074669 HGMCELJO_00004 7096 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4597A>T None
M0074670 HGMCELJO_00004 7106 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4607G>A None
M0074671 HGMCELJO_00004 7113 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4614A>G None
M0074672 HGMCELJO_00004 7136 11 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4637T>G None
M0074673 HGMCELJO_00004 7138 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4639A>C None
M0074674 HGMCELJO_00004 7150 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4651T>C None
M0074675 HGMCELJO_00004 7185 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4686C>T None
M0074676 HGMCELJO_00004 7238 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4739A>T None
M0074677 HGMCELJO_00004 7243 11 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4744G>A None
M0074678 HGMCELJO_00004 7265 11 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4766G>A None
M0074679 HGMCELJO_00004 7315 13 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4816A>G None
M0074680 HGMCELJO_00004 7396 8 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4897T>C None
M0074681 HGMCELJO_00004 7398 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4899T>G None
M0074682 HGMCELJO_00004 7418 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4919G>T None
M0074683 HGMCELJO_00004 7429 8 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4930T>C None
M0074684 HGMCELJO_00004 7437 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4938C>T None
M0074685 HGMCELJO_00004 7440 9 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -4941C>A None
M0074686 HGMCELJO_00004 7476 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4977A>T None
M0074687 HGMCELJO_00008 7509 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3094G>A None
M0074688 HGMCELJO_00008 7518 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3103T>C None
M0074689 HGMCELJO_00008 7551 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3136T>G None
M0074690 HGMCELJO_00008 7589 11 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -3174A>G None
M0074691 HGMCELJO_00008 7602 10 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -3187A>G None
M0074692 HGMCELJO_00008 7646 12 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -3231G>A None
M0074693 HGMCELJO_00008 7647 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3232A>G None
M0074694 HGMCELJO_00008 7649 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3234G>T None
M0074695 HGMCELJO_00008 7658 12 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -3243A>T None
M0074696 HGMCELJO_00008 7681 8 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -3266G>A None
M0074697 HGMCELJO_00008 7687 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3272G>A None
M0074698 HGMCELJO_00013 8449 10 Skin 0.19 protein_coding synonymous_variant LOW 756T>G Thr252Thr
M0074699 HGMCELJO_00013 8974 14 Skin 0.26 protein_coding synonymous_variant LOW 231A>G Pro77Pro
M0074700 HGMCELJO_00013 9061 18 Skin 0.34 protein_coding synonymous_variant LOW 144C>A Leu48Leu
M0074701 HGMCELJO_00013 9070 7 Skin 0.13 protein_coding synonymous_variant LOW 135G>A Ser45Ser
M0074702 HGMCELJO_00013 9088 21 Skin 0.40 protein_coding synonymous_variant LOW 117C>T Phe39Phe
M0074703 HGMCELJO_00008 9226 18 Skin 0.34 protein_coding upstream_gene_variant MODIFIER -4811C>T None
M0074704 HGMCELJO_00008 9261 23 Skin 0.43 protein_coding upstream_gene_variant MODIFIER -4846G>A None
M0074705 HGMCELJO_00008 9334 12 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -4919G>A None
M0074706 HGMCELJO_00008 9348 18 Skin 0.34 protein_coding upstream_gene_variant MODIFIER -4933T>A None
M0074707 HGMCELJO_00008 9364 26 Skin 0.49 protein_coding upstream_gene_variant MODIFIER -4949G>A None
M0074708 HGMCELJO_00008 9388 26 Skin 0.49 protein_coding upstream_gene_variant MODIFIER -4973T>C None
M0074709 HGMCELJO_00012 9464 14 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -2567A>T None
M0074710 HGMCELJO_00012 9466 12 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -2569C>A None
M0074711 HGMCELJO_00012 9489 8 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -2592C>T None
M0074712 HGMCELJO_00014 9496 8 Skin 0.15 protein_coding missense_variant MODERATE 6G>T Lys2Asn
M0074713 HGMCELJO_00014 9514 8 Skin 0.15 protein_coding synonymous_variant LOW 24C>T Ser8Ser
M0074714 HGMCELJO_00014 9610 22 Skin 0.42 protein_coding synonymous_variant LOW 120T>C Ser40Ser
M0074715 HGMCELJO_00014 9665 32 Skin 0.60 protein_coding missense_variant MODERATE 175A>G Asn59Asp
M0074716 HGMCELJO_00014 9757 8 Skin 0.15 protein_coding synonymous_variant LOW 267A>C Ile89Ile
M0074717 HGMCELJO_00014 9797 14 Skin 0.26 protein_coding synonymous_variant LOW 307C>T Leu103Leu
M0074718 HGMCELJO_00014 9835 13 Skin 0.25 protein_coding synonymous_variant LOW 345T>C Ile115Ile
M0074719 HGMCELJO_00014 9859 6 Skin 0.11 protein_coding synonymous_variant LOW 369A>G Pro123Pro
M0074720 HGMCELJO_00014 9862 14 Skin 0.26 protein_coding missense_variant MODERATE 372T>G Ile124Met
M0074721 HGMCELJO_00014 9877 7 Skin 0.13 protein_coding synonymous_variant LOW 387G>T Pro129Pro
M0074722 HGMCELJO_00014 9887 13 Skin 0.25 protein_coding missense_variant MODERATE 397G>A Asp133Asn
M0074723 HGMCELJO_00014 9922 14 Skin 0.26 protein_coding synonymous_variant LOW 432T>C Phe144Phe
M0074724 HGMCELJO_00014 9991 13 Skin 0.25 protein_coding missense_variant MODERATE 501A>T Lys167Asn
M0074725 HGMCELJO_00012 9996 13 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -3099G>A None
M0074726 HGMCELJO_00012 10004 13 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -3107T>G None
M0074727 HGMCELJO_00012 10013 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3116G>A None
M0074728 HGMCELJO_00012 10048 12 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -3151T>A None
M0074729 HGMCELJO_00012 10082 9 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3185T>A None
M0074730 HGMCELJO_00012 10099 13 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -3202A>G None
M0074731 HGMCELJO_00012 10105 14 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3208A>G None
M0074732 HGMCELJO_00012 10119 9 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3222G>A None
M0074733 HGMCELJO_00012 10121 9 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3224G>C None
M0074734 HGMCELJO_00012 10135 9 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3238T>A None
M0074735 HGMCELJO_00012 10150 14 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3253A>G None
M0074736 HGMCELJO_00012 10152 18 Skin 0.34 protein_coding upstream_gene_variant MODIFIER -3255G>A None
M0074737 HGMCELJO_00008 8027 10 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -3612T>A None
M0074738 HGMCELJO_00008 8033 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3618A>T None
M0074739 HGMCELJO_00008 8044 9 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3629C>T None
M0074740 HGMCELJO_00008 8065 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3650G>C None
M0074741 HGMCELJO_00008 8097 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3682C>A None
M0074742 HGMCELJO_00008 8099 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3684C>T None
M0074743 HGMCELJO_00008 8120 9 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -3705A>T None
M0074744 HGMCELJO_00008 8122 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3707T>C None
M0074745 HGMCELJO_00008 8135 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3720T>A None
M0074746 HGMCELJO_00008 8191 16 Skin 0.30 protein_coding upstream_gene_variant MODIFIER -3776A>G None
M0074747 HGMCELJO_00008 8216 14 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3801A>G None
M0074748 HGMCELJO_00008 8240 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3825T>A None
M0074749 HGMCELJO_00008 8245 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3830T>G None
M0074750 HGMCELJO_00008 8249 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3834A>T None
M0074751 HGMCELJO_00008 8258 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3843A>G None
M0074752 HGMCELJO_00013 8287 8 Skin 0.15 protein_coding missense_variant MODERATE 918G>T Glu306Asp
M0074753 HGMCELJO_00012 9448 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -2551T>G None
M0074754 HGMCELJO_00012 10200 14 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -3303A>G None
M0074755 HGMCELJO_00012 10214 10 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -3317T>G None
M0074756 HGMCELJO_00012 10266 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3369A>T None
M0074757 HGMCELJO_00012 10272 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3375T>C None
M0074758 HGMCELJO_00012 10286 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3389G>A None
M0074759 HGMCELJO_00012 10291 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3394C>A None
M0074760 HGMCELJO_00012 10300 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3403T>G None
M0074761 HGMCELJO_00012 10338 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3441T>C None
M0074762 HGMCELJO_00012 10360 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3463C>T None
M0074763 HGMCELJO_00012 10361 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3464G>A None
M0074764 HGMCELJO_00012 6814 3 Skin 0.06 protein_coding synonymous_variant LOW 84G>A Val28Val
M0074765 HGMCELJO_00012 11423 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4526G>T None
M0074766 HGMCELJO_00017 12221 4 Skin 0.08 protein_coding missense_variant MODERATE 223G>T Ala75Ser
M0074767 HGMCELJO_00017 12233 4 Skin 0.08 protein_coding synonymous_variant LOW 211T>C Leu71Leu
M0074768 HGMCELJO_00002 3414 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -1560T>A None
M0074769 HGMCELJO_00002 3508 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1654T>A None
M0074770 HGMCELJO_00007 3949 5 Skin 0.09 protein_coding missense_variant MODERATE 382T>C Phe128Leu
M0074771 HGMCELJO_00002 4510 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2656A>G None
M0074772 HGMCELJO_00002 4524 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -2670G>A None
M0074773 HGMCELJO_00009 4705 3 Skin 0.06 protein_coding missense_variant MODERATE 7G>A Asp3Asn
M0074774 HGMCELJO_00009 5064 6 Skin 0.11 protein_coding missense_variant MODERATE 366A>T Gln122His
M0074775 HGMCELJO_00009 5265 4 Skin 0.08 protein_coding synonymous_variant LOW 567C>T Asn189Asn
M0074776 HGMCELJO_00002 6433 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4579T>G None
M0074777 HGMCELJO_00002 6478 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4624G>T None
M0074778 HGMCELJO_00012 6787 6 Skin 0.11 protein_coding synonymous_variant LOW 111A>G Gly37Gly
M0074779 HGMCELJO_00012 6856 5 Skin 0.09 protein_coding synonymous_variant LOW 42T>G Gly14Gly
M0074780 HGMCELJO_00004 7076 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4577A>G None
M0074781 HGMCELJO_00004 7092 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4593G>T None
M0074782 HGMCELJO_00004 7155 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4656A>G None
M0074783 HGMCELJO_00004 7487 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4988A>T None
M0074784 HGMCELJO_00008 7528 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3113A>G None
M0074785 HGMCELJO_00008 7972 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3557A>G None
M0074786 HGMCELJO_00008 8024 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3609A>C None
M0074787 HGMCELJO_00008 8046 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3631T>C None
M0074788 HGMCELJO_00008 8148 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3733A>G None
M0074789 HGMCELJO_00013 8794 3 Skin 0.06 protein_coding synonymous_variant LOW 411C>T Ala137Ala
M0074790 HGMCELJO_00013 9021 3 Skin 0.06 protein_coding synonymous_variant LOW 184C>T Leu62Leu
M0074791 HGMCELJO_00013 9073 4 Skin 0.08 protein_coding synonymous_variant LOW 132G>C Val44Val
M0074792 HGMCELJO_00008 9224 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4809T>G None
M0074793 HGMCELJO_00008 9266 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4851A>G None
M0074794 HGMCELJO_00014 9625 9 Skin 0.17 protein_coding synonymous_variant LOW 135C>T Asn45Asn
M0074795 HGMCELJO_00014 9747 4 Skin 0.08 protein_coding missense_variant MODERATE 257C>T Ala86Val
M0074796 HGMCELJO_00014 9976 4 Skin 0.08 protein_coding synonymous_variant LOW 486T>C Asn162Asn
M0074797 HGMCELJO_00012 10063 10 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -3166C>A None
M0074798 HGMCELJO_00002 6495 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4641C>A None
M0074799 HGMCELJO_00008 8136 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3721G>A None
M0074800 HGMCELJO_00012 10565 16 Skin 0.30 protein_coding upstream_gene_variant MODIFIER -3668A>G None
M0074801 HGMCELJO_00008 9205 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4790C>T None
M0074802 HGMCELJO_00008 9308 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4893A>G None
M0074803 HGMCELJO_00008 9353 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4938C>A None
M0074804 HGMCELJO_00014 9983 4 Skin 0.08 protein_coding synonymous_variant LOW 493T>C Leu165Leu
M0074805 HGMCELJO_00012 10003 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3106T>C None
M0074806 HGMCELJO_00012 10058 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3161G>A None
M0074807 HGMCELJO_00012 10763 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3866T>C None
M0074808 HGMCELJO_00015 11044 5 Skin 0.09 protein_coding missense_variant MODERATE 169G>A Val57Ile
M0074809 HGMCELJO_00012 11163 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4266T>G None
M0074810 HGMCELJO_00012 11164 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4267G>A None
M0074811 HGMCELJO_00012 11175 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4278A>C None
M0074812 HGMCELJO_00012 11202 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4305A>G None
M0074813 HGMCELJO_00012 11436 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4539T>C None
M0074814 HGMCELJO_00016 11520 3 Skin 0.06 protein_coding missense_variant MODERATE 34T>A Phe12Ile
M0074815 HGMCELJO_00016 11549 3 Skin 0.06 protein_coding synonymous_variant LOW 63G>A Ser21Ser
M0074816 HGMCELJO_00016 11552 3 Skin 0.06 protein_coding synonymous_variant LOW 66A>G Glu22Glu
M0074817 HGMCELJO_00016 11624 3 Skin 0.06 protein_coding synonymous_variant LOW 138G>A Glu46Glu
M0074818 HGMCELJO_00016 11652 3 Skin 0.06 protein_coding missense_variant MODERATE 166T>A Leu56Met
M0074819 HGMCELJO_00016 11654 3 Skin 0.06 protein_coding synonymous_variant LOW 168G>A Leu56Leu
M0074820 HGMCELJO_00016 11672 3 Skin 0.06 protein_coding synonymous_variant LOW 186A>G Lys62Lys
M0074821 HGMCELJO_00016 11681 3 Skin 0.06 protein_coding synonymous_variant LOW 195A>G Glu65Glu
M0074822 HGMCELJO_00008 7927 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3512T>G None
M0074823 HGMCELJO_00008 7928 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3513G>A None
M0074824 HGMCELJO_00008 7973 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3558C>G None
M0074825 HGMCELJO_00008 8126 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3711T>A None
M0074826 HGMCELJO_00008 9326 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4911A>T None
M0074827 HGMCELJO_00008 9389 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4974T>C None
M0074828 HGMCELJO_00012 10087 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3190G>A None
M0074829 HGMCELJO_00012 10095 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3198T>C None
M0074830 HGMCELJO_00012 10104 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3207A>G None
M0074831 HGMCELJO_00012 10137 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3240G>A None
M0074832 HGMCELJO_00012 10213 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3316A>G None
M0074833 HGMCELJO_00001 604 4 Skin 0.08 protein_coding missense_variant MODERATE 109A>G Ser37Gly
M0074834 HGMCELJO_00001 696 4 Skin 0.08 protein_coding synonymous_variant LOW 201C>T Cys67Cys
M0074835 HGMCELJO_00001 732 4 Skin 0.08 protein_coding synonymous_variant LOW 237T>C His79His
M0074836 HGMCELJO_00001 882 4 Skin 0.08 protein_coding synonymous_variant LOW 387C>T Phe129Phe
M0074837 HGMCELJO_00002 1367 6 Skin 0.11 protein_coding missense_variant MODERATE 488T>A Met163Lys
M0074838 HGMCELJO_00002 1432 4 Skin 0.08 protein_coding synonymous_variant LOW 423A>G Thr141Thr
M0074839 HGMCELJO_00002 1464 6 Skin 0.11 protein_coding missense_variant MODERATE 391A>T Asn131Tyr
M0074840 HGMCELJO_00002 1483 4 Skin 0.08 protein_coding missense_variant MODERATE 372C>A His124Gln
M0074841 HGMCELJO_00002 1544 4 Skin 0.08 protein_coding missense_variant MODERATE 311G>A Arg104Lys
M0074842 HGMCELJO_00002 1711 6 Skin 0.11 protein_coding synonymous_variant LOW 144C>T Asn48Asn
M0074843 HGMCELJO_00002 1737 6 Skin 0.11 protein_coding missense_variant MODERATE 118A>G Thr40Ala
M0074844 HGMCELJO_00002 1889 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -35G>A None
M0074845 HGMCELJO_00002 1997 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -143T>A None
M0074846 HGMCELJO_00002 2061 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -207A>C None
M0074847 HGMCELJO_00003 2087 6 Skin 0.11 protein_coding missense_variant MODERATE 23A>G Tyr8Cys
M0074848 HGMCELJO_00004 2392 3 Skin 0.06 protein_coding synonymous_variant LOW 108T>C Asn36Asn
M0074849 HGMCELJO_00004 2451 5 Skin 0.09 protein_coding synonymous_variant LOW 49T>C Leu17Leu
M0074850 HGMCELJO_00002 2582 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -728T>C None
M0074851 HGMCELJO_00002 2639 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -785C>A None
M0074852 HGMCELJO_00005 2937 3 Skin 0.06 protein_coding synonymous_variant LOW 30C>T Asn10Asn
M0074853 HGMCELJO_00005 3129 3 Skin 0.06 protein_coding synonymous_variant LOW 222G>A Leu74Leu
M0074854 HGMCELJO_00002 3174 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1320G>A None
M0074855 HGMCELJO_00013 9103 3 Skin 0.06 protein_coding synonymous_variant LOW 102C>T Phe34Phe
M0074856 HGMCELJO_00008 9207 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4792G>A None
M0074857 HGMCELJO_00008 9345 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4930G>A None
M0074858 HGMCELJO_00014 9670 3 Skin 0.06 protein_coding synonymous_variant LOW 180T>A Ile60Ile
M0074859 HGMCELJO_00012 11093 8 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4196A>G None
M0074860 HGMCELJO_00012 11132 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4235C>T None
M0074861 HGMCELJO_00012 11183 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4286G>A None
M0074862 HGMCELJO_00012 11295 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4398G>T None
M0074863 HGMCELJO_00016 11540 6 Skin 0.11 protein_coding missense_variant MODERATE 54G>T Glu18Asp
M0074864 HGMCELJO_00013 8450 4 Skin 0.08 protein_coding missense_variant MODERATE 755C>A Thr252Asn
M0074865 HGMCELJO_00014 9881 3 Skin 0.06 protein_coding missense_variant MODERATE 391G>A Ala131Thr
M0074866 HGMCELJO_00012 10118 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3221T>A None
M0074867 HGMCELJO_00015 10984 4 Skin 0.08 protein_coding missense_variant MODERATE 109T>C Phe37Leu
M0074868 HGMCELJO_00015 11004 4 Skin 0.08 protein_coding synonymous_variant LOW 129A>G Ser43Ser
M0074869 HGMCELJO_00015 11034 4 Skin 0.08 protein_coding synonymous_variant LOW 159C>G Leu53Leu
M0074870 HGMCELJO_00001 306 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -190C>T None
M0074871 HGMCELJO_00001 314 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -182T>C None
M0074872 HGMCELJO_00001 337 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -159T>G None
M0074873 HGMCELJO_00001 825 3 Skin 0.06 protein_coding missense_variant MODERATE 330A>T Gln110His
M0074874 HGMCELJO_00001 828 3 Skin 0.06 protein_coding synonymous_variant LOW 333T>C Asn111Asn
M0074875 HGMCELJO_00001 861 3 Skin 0.06 protein_coding synonymous_variant LOW 366C>T Asn122Asn
M0074876 HGMCELJO_00001 900 3 Skin 0.06 protein_coding synonymous_variant LOW 405T>C Phe135Phe
M0074877 HGMCELJO_00001 993 3 Skin 0.06 protein_coding missense_variant MODERATE 498T>A Asp166Glu
M0074878 HGMCELJO_00003 1000 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1065G>A None
M0074879 HGMCELJO_00003 1045 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1020C>G None
M0074880 HGMCELJO_00003 1048 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1017T>A None
M0074881 HGMCELJO_00003 1054 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1011G>A None
M0074882 HGMCELJO_00003 1064 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1001C>G None
M0074883 HGMCELJO_00003 1078 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -987A>G None
M0074884 HGMCELJO_00003 1095 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -970T>C None
M0074885 HGMCELJO_00003 1112 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -953G>T None
M0074886 HGMCELJO_00003 1152 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -913A>G None
M0074887 HGMCELJO_00003 1153 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -912G>T None
M0074888 HGMCELJO_00003 1204 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -861G>A None
M0074889 HGMCELJO_00003 1213 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -852A>G None
M0074890 HGMCELJO_00003 1216 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -849A>G None
M0074891 HGMCELJO_00003 1232 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -833T>C None
M0074892 HGMCELJO_00003 1237 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -828A>G None
M0074893 HGMCELJO_00003 1238 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -827T>C None
M0074894 HGMCELJO_00003 1239 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -826T>A None
M0074895 HGMCELJO_00002 1290 3 Skin 0.06 protein_coding missense_variant MODERATE 565T>A Leu189Ile
M0074896 HGMCELJO_00002 1300 3 Skin 0.06 protein_coding synonymous_variant LOW 555C>A Ile185Ile
M0074897 HGMCELJO_00002 1600 3 Skin 0.06 protein_coding synonymous_variant LOW 255G>A Gly85Gly
M0074898 HGMCELJO_00002 1998 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -144T>A None
M0074899 HGMCELJO_00002 3527 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1673G>A None
M0074900 HGMCELJO_00002 3543 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1689A>T None
M0074901 HGMCELJO_00002 3544 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1690A>G None
M0074902 HGMCELJO_00002 3548 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1694G>A None
M0074903 HGMCELJO_00002 3560 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1706A>T None
M0074904 HGMCELJO_00007 3578 3 Skin 0.06 protein_coding missense_variant MODERATE 11T>C Ile4Thr
M0074905 HGMCELJO_00007 3639 3 Skin 0.06 protein_coding synonymous_variant LOW 72T>C Asn24Asn
M0074906 HGMCELJO_00007 3648 3 Skin 0.06 protein_coding synonymous_variant LOW 81C>T Phe27Phe
M0074907 HGMCELJO_00007 3651 3 Skin 0.06 protein_coding synonymous_variant LOW 84T>A Ala28Ala
M0074908 HGMCELJO_00007 3664 3 Skin 0.06 protein_coding missense_variant MODERATE 97C>A Arg33Ser
M0074909 HGMCELJO_00007 3687 3 Skin 0.06 protein_coding synonymous_variant LOW 120C>T Asp40Asp
M0074910 HGMCELJO_00007 3694 3 Skin 0.06 protein_coding missense_variant MODERATE 127G>A Val43Ile
M0074911 HGMCELJO_00007 3780 3 Skin 0.06 protein_coding synonymous_variant LOW 213A>C Pro71Pro
M0074912 HGMCELJO_00007 3793 3 Skin 0.06 protein_coding missense_variant MODERATE 226A>T Met76Leu
M0074913 HGMCELJO_00007 3795 3 Skin 0.06 protein_coding missense_variant MODERATE 228G>A Met76Ile
M0074914 HGMCELJO_00007 3886 3 Skin 0.06 protein_coding missense_variant MODERATE 319A>T Thr107Ser
M0074915 HGMCELJO_00007 3963 3 Skin 0.06 protein_coding synonymous_variant LOW 396T>C Ser132Ser
M0074916 HGMCELJO_00007 4014 3 Skin 0.06 protein_coding synonymous_variant LOW 447C>G Gly149Gly
M0074917 HGMCELJO_00007 4020 3 Skin 0.06 protein_coding synonymous_variant LOW 453T>C Asp151Asp
M0074918 HGMCELJO_00002 6521 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4667C>T None
M0074919 HGMCELJO_00002 6530 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4676T>C None
M0074920 HGMCELJO_00002 6539 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4685T>A None
M0074921 HGMCELJO_00002 6542 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4688A>T None
M0074922 HGMCELJO_00002 6571 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4717C>G None
M0074923 HGMCELJO_00002 6576 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4722A>G None
M0074924 HGMCELJO_00002 6583 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4729C>T None
M0074925 HGMCELJO_00002 6604 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4750T>C None
M0074926 HGMCELJO_00002 6618 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4764C>T None
M0074927 HGMCELJO_00002 6621 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4767A>C None
M0074928 HGMCELJO_00002 6634 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4780C>T None
M0074929 HGMCELJO_00002 6680 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4826T>C None
M0074930 HGMCELJO_00012 6727 4 Skin 0.08 protein_coding synonymous_variant LOW 171T>A Gly57Gly
M0074931 HGMCELJO_00012 6736 3 Skin 0.06 protein_coding synonymous_variant LOW 162T>A Gly54Gly
M0074932 HGMCELJO_00012 6745 4 Skin 0.08 protein_coding synonymous_variant LOW 153C>T Ile51Ile
M0074933 HGMCELJO_00012 6793 4 Skin 0.08 protein_coding synonymous_variant LOW 105A>G Glu35Glu
M0074934 HGMCELJO_00008 7829 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3414A>G None
M0074935 HGMCELJO_00009 5289 3 Skin 0.06 protein_coding synonymous_variant LOW 591C>T Asn197Asn
M0074936 HGMCELJO_00012 11323 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4426C>T None
M0074937 HGMCELJO_00012 11363 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4466C>T None
M0074938 HGMCELJO_00008 8074 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3659G>A None
M0074939 HGMCELJO_00008 9288 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4873C>A None
M0074940 HGMCELJO_00012 10252 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3355T>G None
M0074941 HGMCELJO_00012 10253 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3356A>T None
M0074942 HGMCELJO_00012 10334 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3437C>T None
M0074943 HGMCELJO_00012 10389 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3492A>G None
M0074944 HGMCELJO_00012 10403 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3506A>T None
M0074945 HGMCELJO_00012 10430 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3533T>A None
M0074946 HGMCELJO_00012 10455 5 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3558A>C None
M0074947 HGMCELJO_00012 10465 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3568C>T None
M0074948 HGMCELJO_00012 10467 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3570G>T None
M0074949 HGMCELJO_00012 10475 4 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -3578G>C None
M0074950 HGMCELJO_00012 10476 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3579A>G None
M0074951 HGMCELJO_00012 10570 7 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3673A>C None
M0074952 HGMCELJO_00012 10504 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3607C>T None
M0074953 HGMCELJO_00008 8017 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3602C>T None
M0074954 HGMCELJO_00012 10179 6 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -3282G>A None
M0074955 HGMCELJO_00004 7046 3 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4547T>C None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
HGMCELJO_00012 PHI:11162 msaB 78.8 4.8e-25 1 66 1.0000 1.0000 primates skin infection; food poisoning; respiratory disease cold shock protein reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
HGMCELJO_00018 2.A.38.4.6 74.9 1.6e-180 18 452 0.9624 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.38 The K+ Transporter (Trk) Family