Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C3167
  Reference Plasmid   MET0293_bin.22__k81_57291
  Reference Plasmid Size   44278
  Reference Plasmid GC Content   0.37
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0076884 CCAKIGCC_00001 155 5 Skin 0.16 protein_coding synonymous_variant LOW 1131T>A Ile377Ile
M0076885 CCAKIGCC_00001 221 7 Skin 0.23 protein_coding synonymous_variant LOW 1065A>T Leu355Leu
M0076886 CCAKIGCC_00001 264 7 Skin 0.23 protein_coding missense_variant MODERATE 1022G>C Ser341Thr
M0076887 CCAKIGCC_00001 309 3 Skin 0.10 protein_coding missense_variant MODERATE 977A>T Asn326Ile
M0076888 CCAKIGCC_00001 371 5 Skin 0.16 protein_coding synonymous_variant LOW 915A>G Ser305Ser
M0076889 CCAKIGCC_00001 453 7 Skin 0.23 protein_coding missense_variant MODERATE 833G>A Gly278Asp
M0076890 CCAKIGCC_00001 779 6 Skin 0.19 protein_coding synonymous_variant LOW 507C>A Ala169Ala
M0076891 CCAKIGCC_00001 881 3 Skin 0.10 protein_coding synonymous_variant LOW 405T>C Ala135Ala
M0076892 CCAKIGCC_00001 1073 7 Skin 0.23 protein_coding synonymous_variant LOW 213T>C Arg71Arg
M0076893 CCAKIGCC_00001 1093 5 Skin 0.16 protein_coding missense_variant MODERATE 193A>G Asn65Asp
M0076894 CCAKIGCC_00001 1094 5 Skin 0.16 protein_coding synonymous_variant LOW 192A>G Glu64Glu
M0076895 CCAKIGCC_00001 1223 8 Skin 0.26 protein_coding synonymous_variant LOW 63A>C Val21Val
M0076896 CCAKIGCC_00001 1258 4 Skin 0.13 protein_coding missense_variant MODERATE 28G>A Asp10Asn
M0076897 CCAKIGCC_00001 1288 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3C>T None
M0076898 CCAKIGCC_00001 1350 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -65A>G None
M0076899 CCAKIGCC_00001 1358 7 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -73G>A None
M0076900 CCAKIGCC_00001 1359 5 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -74A>G None
M0076901 CCAKIGCC_00001 1540 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -255T>C None
M0076902 CCAKIGCC_00002 1660 7 Skin 0.23 protein_coding synonymous_variant LOW 36T>C Ser12Ser
M0076903 CCAKIGCC_00013 19690 4 Skin 0.13 protein_coding missense_variant MODERATE 451G>A Val151Ile
M0076904 CCAKIGCC_00013 19691 3 Skin 0.10 protein_coding synonymous_variant LOW 450G>C Ala150Ala
M0076905 CCAKIGCC_00013 19730 3 Skin 0.10 protein_coding synonymous_variant LOW 411G>A Ala137Ala
M0076906 CCAKIGCC_00013 19746 4 Skin 0.13 protein_coding missense_variant MODERATE 395A>C Glu132Ala
M0076907 CCAKIGCC_00013 19825 3 Skin 0.10 protein_coding synonymous_variant LOW 316C>T Leu106Leu
M0076908 CCAKIGCC_00013 19833 4 Skin 0.13 protein_coding missense_variant MODERATE 308C>T Ser103Leu
M0076909 CCAKIGCC_00013 19834 4 Skin 0.13 protein_coding missense_variant MODERATE 307T>C Ser103Pro
M0076910 CCAKIGCC_00013 19856 3 Skin 0.10 protein_coding synonymous_variant LOW 285C>G Pro95Pro
M0076911 CCAKIGCC_00013 19859 3 Skin 0.10 protein_coding synonymous_variant LOW 282C>T His94His
M0076912 CCAKIGCC_00013 19874 3 Skin 0.10 protein_coding synonymous_variant LOW 267T>C Gly89Gly
M0076913 CCAKIGCC_00013 19897 4 Skin 0.13 protein_coding synonymous_variant LOW 244T>C Leu82Leu
M0076914 CCAKIGCC_00013 19920 3 Skin 0.10 protein_coding missense_variant MODERATE 221C>T Thr74Ile
M0076915 CCAKIGCC_00013 19922 3 Skin 0.10 protein_coding synonymous_variant LOW 219C>T Leu73Leu
M0076916 CCAKIGCC_00013 19940 3 Skin 0.10 protein_coding synonymous_variant LOW 201A>G Lys67Lys
M0076917 CCAKIGCC_00013 19994 4 Skin 0.13 protein_coding synonymous_variant LOW 147T>C Phe49Phe
M0076918 CCAKIGCC_00013 19997 4 Skin 0.13 protein_coding synonymous_variant LOW 144A>G Leu48Leu
M0076919 CCAKIGCC_00013 20042 3 Skin 0.10 protein_coding synonymous_variant LOW 99T>C Gly33Gly
M0076920 CCAKIGCC_00011 20171 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -2786T>C None
M0076921 CCAKIGCC_00011 20173 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -2788G>A None
M0076922 CCAKIGCC_00011 20190 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -2805A>G None
M0076923 CCAKIGCC_00011 20207 5 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -2822A>G None
M0076924 CCAKIGCC_00011 20243 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2858C>T None
M0076925 CCAKIGCC_00011 20251 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2866A>C None
M0076926 CCAKIGCC_00011 20252 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2867G>A None
M0076927 CCAKIGCC_00011 20275 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2890G>A None
M0076928 CCAKIGCC_00011 20343 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2958A>G None
M0076929 CCAKIGCC_00011 20351 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2966A>G None
M0076930 CCAKIGCC_00011 20358 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -2973C>A None
M0076931 CCAKIGCC_00011 20378 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -2993C>T None
M0076932 CCAKIGCC_00011 20391 5 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -3006A>G None
M0076933 CCAKIGCC_00011 20410 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3025A>G None
M0076934 CCAKIGCC_00014 20489 5 Skin 0.16 protein_coding synonymous_variant LOW 33T>C Ile11Ile
M0076935 CCAKIGCC_00014 20542 5 Skin 0.16 protein_coding missense_variant MODERATE 86T>C Ile29Thr
M0076936 CCAKIGCC_00014 20552 3 Skin 0.10 protein_coding synonymous_variant LOW 96G>A Pro32Pro
M0076937 CCAKIGCC_00014 20558 3 Skin 0.10 protein_coding synonymous_variant LOW 102C>T Ser34Ser
M0076938 CCAKIGCC_00014 20660 5 Skin 0.16 protein_coding synonymous_variant LOW 204A>T Pro68Pro
M0076939 CCAKIGCC_00014 20685 6 Skin 0.19 protein_coding missense_variant MODERATE 229A>G Thr77Ala
M0076940 CCAKIGCC_00014 20703 6 Skin 0.19 protein_coding missense_variant MODERATE 247A>G Ile83Val
M0076941 CCAKIGCC_00014 20785 4 Skin 0.13 protein_coding missense_variant MODERATE 329C>G Thr110Ser
M0076942 CCAKIGCC_00014 20795 3 Skin 0.10 protein_coding synonymous_variant LOW 339A>T Leu113Leu
M0076943 CCAKIGCC_00014 20843 5 Skin 0.16 protein_coding synonymous_variant LOW 387A>G Glu129Glu
M0076944 CCAKIGCC_00014 20870 6 Skin 0.19 protein_coding synonymous_variant LOW 414A>G Leu138Leu
M0076945 CCAKIGCC_00014 20921 7 Skin 0.23 protein_coding synonymous_variant LOW 465C>T Gly155Gly
M0076946 CCAKIGCC_00014 21018 7 Skin 0.23 protein_coding missense_variant MODERATE 562G>A Gly188Ser
M0076947 CCAKIGCC_00014 21098 5 Skin 0.16 protein_coding synonymous_variant LOW 642C>T Val214Val
M0076948 CCAKIGCC_00014 21131 5 Skin 0.16 protein_coding synonymous_variant LOW 675C>T Tyr225Tyr
M0076949 CCAKIGCC_00014 21284 6 Skin 0.19 protein_coding synonymous_variant LOW 828A>G Gln276Gln
M0076950 CCAKIGCC_00014 21296 6 Skin 0.19 protein_coding synonymous_variant LOW 840G>A Glu280Glu
M0076951 CCAKIGCC_00014 21389 6 Skin 0.19 protein_coding synonymous_variant LOW 933T>G Val311Val
M0076952 CCAKIGCC_00014 21392 6 Skin 0.19 protein_coding synonymous_variant LOW 936A>G Ala312Ala
M0076953 CCAKIGCC_00014 21395 6 Skin 0.19 protein_coding synonymous_variant LOW 939G>A Lys313Lys
M0076954 CCAKIGCC_00014 21413 7 Skin 0.23 protein_coding synonymous_variant LOW 957A>G Glu319Glu
M0076955 CCAKIGCC_00014 21422 7 Skin 0.23 protein_coding synonymous_variant LOW 966A>G Glu322Glu
M0076956 CCAKIGCC_00011 21463 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4078G>A None
M0076957 CCAKIGCC_00011 21464 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4079C>A None
M0076958 CCAKIGCC_00011 21534 7 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -4149T>C None
M0076959 CCAKIGCC_00011 21536 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4151C>T None
M0076960 CCAKIGCC_00011 21572 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4187T>C None
M0076961 CCAKIGCC_00015 21708 7 Skin 0.23 protein_coding synonymous_variant LOW 135C>T His45His
M0076962 CCAKIGCC_00015 21711 7 Skin 0.23 protein_coding synonymous_variant LOW 138A>G Thr46Thr
M0076963 CCAKIGCC_00015 21715 7 Skin 0.23 protein_coding missense_variant MODERATE 142A>G Ile48Val
M0076964 CCAKIGCC_00015 22128 7 Skin 0.23 protein_coding synonymous_variant LOW 555C>T Phe185Phe
M0076965 CCAKIGCC_00015 22233 6 Skin 0.19 protein_coding synonymous_variant LOW 660T>C Ser220Ser
M0076966 CCAKIGCC_00015 22245 6 Skin 0.19 protein_coding synonymous_variant LOW 672G>A Ser224Ser
M0076967 CCAKIGCC_00011 22279 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4894G>C None
M0076968 CCAKIGCC_00011 22282 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4897T>G None
M0076969 CCAKIGCC_00011 22283 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4898C>G None
M0076970 CCAKIGCC_00011 22284 5 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4899C>T None
M0076971 CCAKIGCC_00016 22291 5 Skin 0.16 protein_coding synonymous_variant LOW 867A>G Lys289Lys
M0076972 CCAKIGCC_00016 22304 5 Skin 0.16 protein_coding missense_variant MODERATE 854G>T Arg285Leu
M0076973 CCAKIGCC_00016 22315 5 Skin 0.16 protein_coding synonymous_variant LOW 843T>C Tyr281Tyr
M0076974 CCAKIGCC_00016 22347 4 Skin 0.13 protein_coding missense_variant MODERATE 811G>A Ala271Thr
M0076975 CCAKIGCC_00016 22356 4 Skin 0.13 protein_coding missense_variant MODERATE 802C>T Arg268Cys
M0076976 CCAKIGCC_00016 22375 4 Skin 0.13 protein_coding synonymous_variant LOW 783G>A Glu261Glu
M0076977 CCAKIGCC_00016 22390 4 Skin 0.13 protein_coding synonymous_variant LOW 768C>A Pro256Pro
M0076978 CCAKIGCC_00016 22393 5 Skin 0.16 protein_coding synonymous_variant LOW 765T>C His255His
M0076979 CCAKIGCC_00016 22411 4 Skin 0.13 protein_coding synonymous_variant LOW 747G>T Leu249Leu
M0076980 CCAKIGCC_00016 22456 4 Skin 0.13 protein_coding synonymous_variant LOW 702T>C Asp234Asp
M0076981 CCAKIGCC_00016 22468 5 Skin 0.16 protein_coding synonymous_variant LOW 690T>C Ala230Ala
M0076982 CCAKIGCC_00016 22477 5 Skin 0.16 protein_coding synonymous_variant LOW 681T>C His227His
M0076983 CCAKIGCC_00016 22530 5 Skin 0.16 protein_coding missense_variant MODERATE 628G>A Val210Ile
M0076984 CCAKIGCC_00016 22534 5 Skin 0.16 protein_coding synonymous_variant LOW 624G>A Leu208Leu
M0076985 CCAKIGCC_00016 22537 5 Skin 0.16 protein_coding synonymous_variant LOW 621T>C Ala207Ala
M0076986 CCAKIGCC_00010 18937 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4644T>C None
M0076987 CCAKIGCC_00013 18941 6 Skin 0.19 protein_coding splice_region_variant&stop_retained_variant LOW 1200A>G Ter400Ter
M0076988 CCAKIGCC_00001 347 4 Skin 0.13 protein_coding synonymous_variant LOW 939G>A Gln313Gln
M0076989 CCAKIGCC_00001 419 5 Skin 0.16 protein_coding synonymous_variant LOW 867G>A Leu289Leu
M0076990 CCAKIGCC_00001 878 3 Skin 0.10 protein_coding synonymous_variant LOW 408C>T Ala136Ala
M0076991 CCAKIGCC_00001 1106 3 Skin 0.10 protein_coding synonymous_variant LOW 180T>C Ser60Ser
M0076992 CCAKIGCC_00001 1318 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -33A>G None
M0076993 CCAKIGCC_00001 1327 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -42C>T None
M0076994 CCAKIGCC_00001 1332 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -47T>G None
M0076995 CCAKIGCC_00001 1343 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -58T>C None
M0076996 CCAKIGCC_00001 1348 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -63A>T None
M0076997 CCAKIGCC_00001 1388 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -103C>T None
M0076998 CCAKIGCC_00001 1396 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -111A>G None
M0076999 CCAKIGCC_00001 1410 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -125G>A None
M0077000 CCAKIGCC_00001 1420 5 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -135G>A None
M0077001 CCAKIGCC_00006 8034 3 Skin 0.10 protein_coding synonymous_variant LOW 42A>G Leu14Leu
M0077002 CCAKIGCC_00008 9205 3 Skin 0.10 protein_coding synonymous_variant LOW 468A>G Leu156Leu
M0077003 CCAKIGCC_00009 9838 3 Skin 0.10 protein_coding synonymous_variant LOW 1329G>A Arg443Arg
M0077004 CCAKIGCC_00009 9874 3 Skin 0.10 protein_coding synonymous_variant LOW 1293G>A Thr431Thr
M0077005 CCAKIGCC_00009 9877 3 Skin 0.10 protein_coding synonymous_variant LOW 1290C>T Val430Val
M0077006 CCAKIGCC_00009 9907 3 Skin 0.10 protein_coding synonymous_variant LOW 1260C>T Asn420Asn
M0077007 CCAKIGCC_00009 10030 3 Skin 0.10 protein_coding synonymous_variant LOW 1137A>G Thr379Thr
M0077008 CCAKIGCC_00009 10036 3 Skin 0.10 protein_coding synonymous_variant LOW 1131T>G Val377Val
M0077009 CCAKIGCC_00009 10268 3 Skin 0.10 protein_coding missense_variant MODERATE 899T>C Ile300Thr
M0077010 CCAKIGCC_00009 10483 3 Skin 0.10 protein_coding synonymous_variant LOW 684A>G Gln228Gln
M0077011 CCAKIGCC_00036 41146 3 Skin 0.10 protein_coding missense_variant MODERATE 79T>A Tyr27Asn
M0077012 CCAKIGCC_00036 41218 3 Skin 0.10 protein_coding missense_variant MODERATE 151A>G Thr51Ala
M0077013 CCAKIGCC_00036 41229 3 Skin 0.10 protein_coding synonymous_variant LOW 162G>T Thr54Thr
M0077014 CCAKIGCC_00030 41307 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4134C>A None
M0077015 CCAKIGCC_00037 41383 3 Skin 0.10 protein_coding synonymous_variant LOW 687A>G Leu229Leu
M0077016 CCAKIGCC_00037 41569 3 Skin 0.10 protein_coding synonymous_variant LOW 501T>C Ile167Ile
M0077017 CCAKIGCC_00037 41668 3 Skin 0.10 protein_coding synonymous_variant LOW 402A>G Leu134Leu
M0077018 CCAKIGCC_00037 41716 3 Skin 0.10 protein_coding synonymous_variant LOW 354A>G Gln118Gln
M0077019 CCAKIGCC_00037 41785 3 Skin 0.10 protein_coding synonymous_variant LOW 285C>T Arg95Arg
M0077020 CCAKIGCC_00037 41876 3 Skin 0.10 protein_coding missense_variant MODERATE 194C>A Ala65Asp
M0077021 CCAKIGCC_00037 42001 3 Skin 0.10 protein_coding synonymous_variant LOW 69T>A Ala23Ala
M0077022 CCAKIGCC_00038 42353 3 Skin 0.10 protein_coding missense_variant MODERATE 428T>A Leu143Gln
M0077023 CCAKIGCC_00038 42356 3 Skin 0.10 protein_coding missense_variant MODERATE 425G>A Arg142Lys
M0077024 CCAKIGCC_00038 42400 3 Skin 0.10 protein_coding synonymous_variant LOW 381T>C Asp127Asp
M0077025 CCAKIGCC_00038 42439 3 Skin 0.10 protein_coding synonymous_variant LOW 342G>A Leu114Leu
M0077026 CCAKIGCC_00038 42451 3 Skin 0.10 protein_coding synonymous_variant LOW 330T>A Pro110Pro
M0077027 CCAKIGCC_00038 42457 3 Skin 0.10 protein_coding synonymous_variant LOW 324C>T Ala108Ala
M0077028 CCAKIGCC_00038 42475 3 Skin 0.10 protein_coding synonymous_variant LOW 306A>T Ala102Ala
M0077029 CCAKIGCC_00038 42517 3 Skin 0.10 protein_coding synonymous_variant LOW 264A>G Ala88Ala
M0077030 CCAKIGCC_00038 42541 3 Skin 0.10 protein_coding synonymous_variant LOW 240G>A Glu80Glu
M0077031 CCAKIGCC_00038 42553 3 Skin 0.10 protein_coding synonymous_variant LOW 228A>G Ala76Ala
M0077032 CCAKIGCC_00038 42583 3 Skin 0.10 protein_coding synonymous_variant LOW 198C>T Ser66Ser
M0077033 CCAKIGCC_00038 42691 3 Skin 0.10 protein_coding synonymous_variant LOW 90T>C Ala30Ala
M0077034 CCAKIGCC_00039 42783 3 Skin 0.10 protein_coding synonymous_variant LOW 1116G>A Lys372Lys
M0077035 CCAKIGCC_00039 42793 3 Skin 0.10 protein_coding missense_variant MODERATE 1106A>G Lys369Arg
M0077036 CCAKIGCC_00039 42909 3 Skin 0.10 protein_coding synonymous_variant LOW 990G>A Ala330Ala
M0077037 CCAKIGCC_00039 42914 3 Skin 0.10 protein_coding missense_variant MODERATE 985T>C Ser329Pro
M0077038 CCAKIGCC_00039 42915 3 Skin 0.10 protein_coding synonymous_variant LOW 984C>T Asn328Asn
M0077039 CCAKIGCC_00039 42927 3 Skin 0.10 protein_coding synonymous_variant LOW 972A>G Lys324Lys
M0077040 CCAKIGCC_00039 42975 3 Skin 0.10 protein_coding synonymous_variant LOW 924C>T Phe308Phe
M0077041 CCAKIGCC_00039 42999 3 Skin 0.10 protein_coding synonymous_variant LOW 900A>C Thr300Thr
M0077042 CCAKIGCC_00039 43032 3 Skin 0.10 protein_coding synonymous_variant LOW 867G>A Leu289Leu
M0077043 CCAKIGCC_00039 43050 3 Skin 0.10 protein_coding synonymous_variant LOW 849G>A Gln283Gln
M0077044 CCAKIGCC_00039 43792 3 Skin 0.10 protein_coding missense_variant MODERATE 107T>C Val36Ala
M0077045 CCAKIGCC_00040 43940 3 Skin 0.10 protein_coding missense_variant MODERATE 284A>G Lys95Arg
M0077046 CCAKIGCC_00002 65 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1560G>A None
M0077047 CCAKIGCC_00002 70 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1555G>A None
M0077048 CCAKIGCC_00002 71 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1554A>G None
M0077049 CCAKIGCC_00002 77 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1548C>T None
M0077050 CCAKIGCC_00002 99 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1526C>T None
M0077051 CCAKIGCC_00002 101 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1524G>A None
M0077052 CCAKIGCC_00002 102 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1523T>G None
M0077053 CCAKIGCC_00002 110 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1515T>C None
M0077054 CCAKIGCC_00001 441 4 Skin 0.13 protein_coding missense_variant MODERATE 845G>A Arg282Lys
M0077055 CCAKIGCC_00001 530 3 Skin 0.10 protein_coding synonymous_variant LOW 756T>G Arg252Arg
M0077056 CCAKIGCC_00001 605 3 Skin 0.10 protein_coding synonymous_variant LOW 681A>T Thr227Thr
M0077057 CCAKIGCC_00001 1148 3 Skin 0.10 protein_coding synonymous_variant LOW 138A>G Glu46Glu
M0077058 CCAKIGCC_00001 1559 5 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -274G>C None
M0077059 CCAKIGCC_00002 1688 3 Skin 0.10 protein_coding missense_variant MODERATE 64C>A His22Asn
M0077060 CCAKIGCC_00002 1690 3 Skin 0.10 protein_coding synonymous_variant LOW 66C>T His22His
M0077061 CCAKIGCC_00002 1730 5 Skin 0.16 protein_coding synonymous_variant LOW 106A>C Arg36Arg
M0077062 CCAKIGCC_00002 1807 5 Skin 0.16 protein_coding synonymous_variant LOW 183G>A Glu61Glu
M0077063 CCAKIGCC_00002 1810 3 Skin 0.10 protein_coding synonymous_variant LOW 186T>C Asp62Asp
M0077064 CCAKIGCC_00002 1930 3 Skin 0.10 protein_coding synonymous_variant LOW 306G>A Gln102Gln
M0077065 CCAKIGCC_00002 1931 3 Skin 0.10 protein_coding missense_variant MODERATE 307C>A Arg103Ser
M0077066 CCAKIGCC_00002 1933 4 Skin 0.13 protein_coding synonymous_variant LOW 309C>A Arg103Arg
M0077067 CCAKIGCC_00002 2008 3 Skin 0.10 protein_coding synonymous_variant LOW 384G>A Thr128Thr
M0077068 CCAKIGCC_00002 2052 5 Skin 0.16 protein_coding missense_variant MODERATE 428G>A Ser143Asn
M0077069 CCAKIGCC_00002 2092 3 Skin 0.10 protein_coding synonymous_variant LOW 468A>G Arg156Arg
M0077070 CCAKIGCC_00002 2101 4 Skin 0.13 protein_coding synonymous_variant LOW 477C>T Leu159Leu
M0077071 CCAKIGCC_00002 2105 4 Skin 0.13 protein_coding missense_variant MODERATE 481C>G Gln161Glu
M0077072 CCAKIGCC_00002 2107 4 Skin 0.13 protein_coding synonymous_variant LOW 483A>G Gln161Gln
M0077073 CCAKIGCC_00002 2114 5 Skin 0.16 protein_coding missense_variant MODERATE 490G>C Asp164His
M0077074 CCAKIGCC_00002 2119 5 Skin 0.16 protein_coding synonymous_variant LOW 495T>C Gly165Gly
M0077075 CCAKIGCC_00002 2161 6 Skin 0.19 protein_coding synonymous_variant LOW 537T>C Phe179Phe
M0077076 CCAKIGCC_00002 2311 5 Skin 0.16 protein_coding synonymous_variant LOW 687G>A Leu229Leu
M0077077 CCAKIGCC_00002 2320 5 Skin 0.16 protein_coding synonymous_variant LOW 696T>C Cys232Cys
M0077078 CCAKIGCC_00001 2362 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1077C>T None
M0077079 CCAKIGCC_00001 2369 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1084A>T None
M0077080 CCAKIGCC_00001 2372 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1087C>T None
M0077081 CCAKIGCC_00003 2649 4 Skin 0.13 protein_coding synonymous_variant LOW 234C>T Thr78Thr
M0077082 CCAKIGCC_00003 2679 5 Skin 0.16 protein_coding synonymous_variant LOW 204A>G Ser68Ser
M0077083 CCAKIGCC_00001 1596 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -311C>T None
M0077084 CCAKIGCC_00002 2176 3 Skin 0.10 protein_coding synonymous_variant LOW 552A>G Gln184Gln
M0077085 CCAKIGCC_00001 3016 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -1731T>C None
M0077086 CCAKIGCC_00001 3073 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1788G>T None
M0077087 CCAKIGCC_00004 3344 3 Skin 0.10 protein_coding synonymous_variant LOW 702A>T Val234Val
M0077088 CCAKIGCC_00004 3422 3 Skin 0.10 protein_coding synonymous_variant LOW 624G>A Val208Val
M0077089 CCAKIGCC_00004 3427 4 Skin 0.13 protein_coding synonymous_variant LOW 619T>C Leu207Leu
M0077090 CCAKIGCC_00007 9033 3 Skin 0.10 protein_coding synonymous_variant LOW 96T>C Leu32Leu
M0077091 CCAKIGCC_00010 12311 3 Skin 0.10 protein_coding synonymous_variant LOW 1983G>A Ala661Ala
M0077092 CCAKIGCC_00010 12329 3 Skin 0.10 protein_coding synonymous_variant LOW 1965A>G Leu655Leu
M0077093 CCAKIGCC_00010 12398 3 Skin 0.10 protein_coding synonymous_variant LOW 1896G>A Arg632Arg
M0077094 CCAKIGCC_00010 12431 3 Skin 0.10 protein_coding synonymous_variant LOW 1863T>C Arg621Arg
M0077095 CCAKIGCC_00010 12455 3 Skin 0.10 protein_coding synonymous_variant LOW 1839G>T Val613Val
M0077096 CCAKIGCC_00010 12523 3 Skin 0.10 protein_coding missense_variant MODERATE 1771T>C Ser591Pro
M0077097 CCAKIGCC_00010 12725 3 Skin 0.10 protein_coding synonymous_variant LOW 1569T>C Ile523Ile
M0077098 CCAKIGCC_00010 12968 3 Skin 0.10 protein_coding synonymous_variant LOW 1326T>G Leu442Leu
M0077099 CCAKIGCC_00010 13208 3 Skin 0.10 protein_coding synonymous_variant LOW 1086A>G Pro362Pro
M0077100 CCAKIGCC_00010 13211 3 Skin 0.10 protein_coding synonymous_variant LOW 1083A>G Val361Val
M0077101 CCAKIGCC_00010 13283 3 Skin 0.10 protein_coding synonymous_variant LOW 1011T>C Thr337Thr
M0077102 CCAKIGCC_00010 13605 3 Skin 0.10 protein_coding missense_variant MODERATE 689T>C Val230Ala
M0077103 CCAKIGCC_00010 13742 3 Skin 0.10 protein_coding synonymous_variant LOW 552C>G Ala184Ala
M0077104 CCAKIGCC_00010 14051 3 Skin 0.10 protein_coding synonymous_variant LOW 243C>T Asn81Asn
M0077105 CCAKIGCC_00010 14229 3 Skin 0.10 protein_coding missense_variant MODERATE 65C>T Thr22Ile
M0077106 CCAKIGCC_00010 14231 3 Skin 0.10 protein_coding missense_variant MODERATE 63T>G Ile21Met
M0077107 CCAKIGCC_00011 14554 3 Skin 0.10 protein_coding synonymous_variant LOW 2832A>G Gln944Gln
M0077108 CCAKIGCC_00011 14641 3 Skin 0.10 protein_coding synonymous_variant LOW 2745A>C Leu915Leu
M0077109 CCAKIGCC_00011 14644 3 Skin 0.10 protein_coding synonymous_variant LOW 2742G>A Gly914Gly
M0077110 CCAKIGCC_00011 14752 3 Skin 0.10 protein_coding synonymous_variant LOW 2634G>C Thr878Thr
M0077111 CCAKIGCC_00011 14758 3 Skin 0.10 protein_coding synonymous_variant LOW 2628A>C Pro876Pro
M0077112 CCAKIGCC_00011 14812 3 Skin 0.10 protein_coding synonymous_variant LOW 2574C>A Ala858Ala
M0077113 CCAKIGCC_00011 14900 4 Skin 0.13 protein_coding missense_variant MODERATE 2486T>C Leu829Pro
M0077114 CCAKIGCC_00011 14907 4 Skin 0.13 protein_coding synonymous_variant LOW 2479T>C Leu827Leu
M0077115 CCAKIGCC_00011 14921 4 Skin 0.13 protein_coding missense_variant MODERATE 2465A>G Gln822Arg
M0077116 CCAKIGCC_00011 14957 4 Skin 0.13 protein_coding missense_variant MODERATE 2429A>G Asn810Ser
M0077117 CCAKIGCC_00011 14958 4 Skin 0.13 protein_coding missense_variant MODERATE 2428A>G Asn810Asp
M0077118 CCAKIGCC_00011 14959 4 Skin 0.13 protein_coding synonymous_variant LOW 2427G>A Gln809Gln
M0077119 CCAKIGCC_00011 14980 3 Skin 0.10 protein_coding synonymous_variant LOW 2406C>A Thr802Thr
M0077120 CCAKIGCC_00011 14998 4 Skin 0.13 protein_coding synonymous_variant LOW 2388G>A Ala796Ala
M0077121 CCAKIGCC_00011 15019 3 Skin 0.10 protein_coding synonymous_variant LOW 2367G>A Ala789Ala
M0077122 CCAKIGCC_00011 15022 3 Skin 0.10 protein_coding synonymous_variant LOW 2364A>G Val788Val
M0077123 CCAKIGCC_00011 15046 3 Skin 0.10 protein_coding synonymous_variant LOW 2340T>G Val780Val
M0077124 CCAKIGCC_00011 15075 3 Skin 0.10 protein_coding missense_variant MODERATE 2311T>A Tyr771Asn
M0077125 CCAKIGCC_00011 15097 3 Skin 0.10 protein_coding synonymous_variant LOW 2289C>T Asn763Asn
M0077126 CCAKIGCC_00011 15104 3 Skin 0.10 protein_coding missense_variant MODERATE 2282C>G Ala761Gly
M0077127 CCAKIGCC_00011 15127 3 Skin 0.10 protein_coding synonymous_variant LOW 2259T>C Pro753Pro
M0077128 CCAKIGCC_00011 15169 3 Skin 0.10 protein_coding synonymous_variant LOW 2217C>T Tyr739Tyr
M0077129 CCAKIGCC_00011 15175 3 Skin 0.10 protein_coding synonymous_variant LOW 2211G>T Thr737Thr
M0077130 CCAKIGCC_00011 15220 3 Skin 0.10 protein_coding synonymous_variant LOW 2166C>T Ile722Ile
M0077131 CCAKIGCC_00011 15271 3 Skin 0.10 protein_coding synonymous_variant LOW 2115C>T Ile705Ile
M0077132 CCAKIGCC_00011 15277 3 Skin 0.10 protein_coding synonymous_variant LOW 2109A>T Ala703Ala
M0077133 CCAKIGCC_00011 15322 3 Skin 0.10 protein_coding synonymous_variant LOW 2064A>G Glu688Glu
M0077134 CCAKIGCC_00011 15376 3 Skin 0.10 protein_coding synonymous_variant LOW 2010G>A Gln670Gln
M0077135 CCAKIGCC_00011 15390 3 Skin 0.10 protein_coding missense_variant MODERATE 1996T>A Ser666Thr
M0077136 CCAKIGCC_00011 15406 3 Skin 0.10 protein_coding synonymous_variant LOW 1980T>C Tyr660Tyr
M0077137 CCAKIGCC_00011 15511 3 Skin 0.10 protein_coding synonymous_variant LOW 1875A>G Val625Val
M0077138 CCAKIGCC_00011 15523 3 Skin 0.10 protein_coding synonymous_variant LOW 1863T>G Ser621Ser
M0077139 CCAKIGCC_00011 15558 3 Skin 0.10 protein_coding synonymous_variant LOW 1828T>C Leu610Leu
M0077140 CCAKIGCC_00011 15565 3 Skin 0.10 protein_coding synonymous_variant LOW 1821T>C Gly607Gly
M0077141 CCAKIGCC_00011 15677 3 Skin 0.10 protein_coding missense_variant MODERATE 1709C>T Ala570Val
M0077142 CCAKIGCC_00011 15748 3 Skin 0.10 protein_coding synonymous_variant LOW 1638A>G Gly546Gly
M0077143 CCAKIGCC_00011 15754 3 Skin 0.10 protein_coding synonymous_variant LOW 1632G>T Pro544Pro
M0077144 CCAKIGCC_00011 15820 3 Skin 0.10 protein_coding synonymous_variant LOW 1566G>A Gln522Gln
M0077145 CCAKIGCC_00011 15838 3 Skin 0.10 protein_coding synonymous_variant LOW 1548G>A Gln516Gln
M0077146 CCAKIGCC_00011 15943 3 Skin 0.10 protein_coding synonymous_variant LOW 1443G>T Leu481Leu
M0077147 CCAKIGCC_00011 15946 3 Skin 0.10 protein_coding synonymous_variant LOW 1440A>G Thr480Thr
M0077148 CCAKIGCC_00011 15958 3 Skin 0.10 protein_coding synonymous_variant LOW 1428A>G Val476Val
M0077149 CCAKIGCC_00011 15963 3 Skin 0.10 protein_coding synonymous_variant LOW 1423T>C Leu475Leu
M0077150 CCAKIGCC_00011 15964 3 Skin 0.10 protein_coding synonymous_variant LOW 1422T>A Ser474Ser
M0077151 CCAKIGCC_00011 15967 3 Skin 0.10 protein_coding synonymous_variant LOW 1419T>G Leu473Leu
M0077152 CCAKIGCC_00011 15976 3 Skin 0.10 protein_coding synonymous_variant LOW 1410G>T Ala470Ala
M0077153 CCAKIGCC_00011 15979 3 Skin 0.10 protein_coding synonymous_variant LOW 1407A>C Ala469Ala
M0077154 CCAKIGCC_00011 15982 3 Skin 0.10 protein_coding synonymous_variant LOW 1404A>G Ala468Ala
M0077155 CCAKIGCC_00011 16074 3 Skin 0.10 protein_coding synonymous_variant LOW 1312C>T Leu438Leu
M0077156 CCAKIGCC_00011 16084 3 Skin 0.10 protein_coding synonymous_variant LOW 1302T>C Thr434Thr
M0077157 CCAKIGCC_00011 16128 3 Skin 0.10 protein_coding synonymous_variant LOW 1258T>C Leu420Leu
M0077158 CCAKIGCC_00011 16135 3 Skin 0.10 protein_coding synonymous_variant LOW 1251A>G Gly417Gly
M0077159 CCAKIGCC_00011 16198 3 Skin 0.10 protein_coding synonymous_variant LOW 1188G>T Thr396Thr
M0077160 CCAKIGCC_00011 16213 3 Skin 0.10 protein_coding synonymous_variant LOW 1173A>T Ala391Ala
M0077161 CCAKIGCC_00011 16282 3 Skin 0.10 protein_coding synonymous_variant LOW 1104G>A Leu368Leu
M0077162 CCAKIGCC_00011 16660 3 Skin 0.10 protein_coding synonymous_variant LOW 726A>G Glu242Glu
M0077163 CCAKIGCC_00012 18024 3 Skin 0.10 protein_coding synonymous_variant LOW 576C>G Thr192Thr
M0077164 CCAKIGCC_00004 3221 3 Skin 0.10 protein_coding synonymous_variant LOW 825G>A Arg275Arg
M0077165 CCAKIGCC_00005 4518 3 Skin 0.10 protein_coding synonymous_variant LOW 372G>A Glu124Glu
M0077166 CCAKIGCC_00005 4527 3 Skin 0.10 protein_coding synonymous_variant LOW 381C>T Ala127Ala
M0077167 CCAKIGCC_00005 4546 3 Skin 0.10 protein_coding synonymous_variant LOW 400T>C Leu134Leu
M0077168 CCAKIGCC_00005 4548 3 Skin 0.10 protein_coding missense_variant MODERATE 402A>C Leu134Phe
M0077169 CCAKIGCC_00005 4614 3 Skin 0.10 protein_coding synonymous_variant LOW 468T>C Thr156Thr
M0077170 CCAKIGCC_00005 4752 3 Skin 0.10 protein_coding synonymous_variant LOW 606C>T Thr202Thr
M0077171 CCAKIGCC_00005 4896 5 Skin 0.16 protein_coding synonymous_variant LOW 750A>G Thr250Thr
M0077172 CCAKIGCC_00005 4899 5 Skin 0.16 protein_coding synonymous_variant LOW 753G>T Gly251Gly
M0077173 CCAKIGCC_00005 4902 5 Skin 0.16 protein_coding synonymous_variant LOW 756T>C Ile252Ile
M0077174 CCAKIGCC_00005 4932 4 Skin 0.13 protein_coding synonymous_variant LOW 786G>A Ala262Ala
M0077175 CCAKIGCC_00005 5163 5 Skin 0.16 protein_coding synonymous_variant LOW 1017C>T Gly339Gly
M0077176 CCAKIGCC_00005 5175 5 Skin 0.16 protein_coding synonymous_variant LOW 1029T>A Pro343Pro
M0077177 CCAKIGCC_00005 5178 5 Skin 0.16 protein_coding synonymous_variant LOW 1032T>G Val344Val
M0077178 CCAKIGCC_00005 5283 3 Skin 0.10 protein_coding synonymous_variant LOW 1137A>T Pro379Pro
M0077179 CCAKIGCC_00005 5430 4 Skin 0.13 protein_coding synonymous_variant LOW 1284C>G Leu428Leu
M0077180 CCAKIGCC_00005 5502 3 Skin 0.10 protein_coding synonymous_variant LOW 1356T>C Leu452Leu
M0077181 CCAKIGCC_00005 5514 3 Skin 0.10 protein_coding synonymous_variant LOW 1368T>C Arg456Arg
M0077182 CCAKIGCC_00001 1437 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -152A>G None
M0077183 CCAKIGCC_00001 1443 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -158C>T None
M0077184 CCAKIGCC_00002 2026 3 Skin 0.10 protein_coding synonymous_variant LOW 402T>C Phe134Phe
M0077185 CCAKIGCC_00003 2544 3 Skin 0.10 protein_coding synonymous_variant LOW 339A>G Glu113Glu
M0077186 CCAKIGCC_00005 4247 3 Skin 0.10 protein_coding missense_variant MODERATE 101G>T Cys34Phe
M0077187 CCAKIGCC_00005 4830 3 Skin 0.10 protein_coding synonymous_variant LOW 684C>T Ala228Ala
M0077188 CCAKIGCC_00005 5187 3 Skin 0.10 protein_coding synonymous_variant LOW 1041A>G Glu347Glu
M0077189 CCAKIGCC_00006 6924 3 Skin 0.10 protein_coding synonymous_variant LOW 1152T>G Pro384Pro
M0077190 CCAKIGCC_00006 7113 3 Skin 0.10 protein_coding synonymous_variant LOW 963A>C Ile321Ile
M0077191 CCAKIGCC_00006 7500 3 Skin 0.10 protein_coding synonymous_variant LOW 576T>C Asn192Asn
M0077192 CCAKIGCC_00006 7503 3 Skin 0.10 protein_coding synonymous_variant LOW 573G>A Thr191Thr
M0077193 CCAKIGCC_00006 7506 3 Skin 0.10 protein_coding synonymous_variant LOW 570G>A Gln190Gln
M0077194 CCAKIGCC_00006 7513 3 Skin 0.10 protein_coding missense_variant MODERATE 563T>C Ile188Thr
M0077195 CCAKIGCC_00006 7612 3 Skin 0.10 protein_coding missense_variant MODERATE 464T>C Val155Ala
M0077196 CCAKIGCC_00006 7626 3 Skin 0.10 protein_coding synonymous_variant LOW 450A>T Ala150Ala
M0077197 CCAKIGCC_00006 7632 3 Skin 0.10 protein_coding synonymous_variant LOW 444A>T Leu148Leu
M0077198 CCAKIGCC_00006 7635 3 Skin 0.10 protein_coding missense_variant MODERATE 441G>C Lys147Asn
M0077199 CCAKIGCC_00006 7636 3 Skin 0.10 protein_coding missense_variant MODERATE 440A>C Lys147Thr
M0077200 CCAKIGCC_00006 7667 3 Skin 0.10 protein_coding missense_variant MODERATE 409T>G Ser137Ala
M0077201 CCAKIGCC_00006 7683 3 Skin 0.10 protein_coding synonymous_variant LOW 393C>T Ser131Ser
M0077202 CCAKIGCC_00006 7744 3 Skin 0.10 protein_coding missense_variant MODERATE 332G>A Arg111Lys
M0077203 CCAKIGCC_00006 7956 3 Skin 0.10 protein_coding synonymous_variant LOW 120T>C Asn40Asn
M0077204 CCAKIGCC_00007 8207 3 Skin 0.10 protein_coding synonymous_variant LOW 922T>C Leu308Leu
M0077205 CCAKIGCC_00007 8217 3 Skin 0.10 protein_coding missense_variant MODERATE 912A>C Glu304Asp
M0077206 CCAKIGCC_00016 22573 3 Skin 0.10 protein_coding synonymous_variant LOW 585G>T Ser195Ser
M0077207 CCAKIGCC_00016 22591 4 Skin 0.13 protein_coding synonymous_variant LOW 567G>A Ala189Ala
M0077208 CCAKIGCC_00016 22625 4 Skin 0.13 protein_coding missense_variant MODERATE 533A>G Asn178Ser
M0077209 CCAKIGCC_00016 22627 3 Skin 0.10 protein_coding synonymous_variant LOW 531G>A Gln177Gln
M0077210 CCAKIGCC_00016 22651 3 Skin 0.10 protein_coding synonymous_variant LOW 507C>T Ile169Ile
M0077211 CCAKIGCC_00016 22744 3 Skin 0.10 protein_coding synonymous_variant LOW 414G>A Gln138Gln
M0077212 CCAKIGCC_00020 25729 3 Skin 0.10 protein_coding missense_variant MODERATE 749A>G Asn250Ser






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term