Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C3168
  Reference Plasmid   MET0293_bin.22__k81_71214
  Reference Plasmid Size   37551
  Reference Plasmid GC Content   0.39
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0077213 DHNIJGGH_00011 11025 4 Skin 0.24 protein_coding synonymous_variant LOW 228A>G Gly76Gly
M0077214 DHNIJGGH_00012 11387 4 Skin 0.24 protein_coding synonymous_variant LOW 1215C>T Ser405Ser
M0077215 DHNIJGGH_00012 11393 4 Skin 0.24 protein_coding synonymous_variant LOW 1209C>T Phe403Phe
M0077216 DHNIJGGH_00012 11675 3 Skin 0.18 protein_coding synonymous_variant LOW 927G>A Gln309Gln
M0077217 DHNIJGGH_00012 11714 4 Skin 0.24 protein_coding synonymous_variant LOW 888C>T Tyr296Tyr
M0077218 DHNIJGGH_00012 11807 4 Skin 0.24 protein_coding synonymous_variant LOW 795A>G Val265Val
M0077219 DHNIJGGH_00012 11819 4 Skin 0.24 protein_coding synonymous_variant LOW 783C>T Gly261Gly
M0077220 DHNIJGGH_00012 12035 4 Skin 0.24 protein_coding synonymous_variant LOW 567A>G Thr189Thr
M0077221 DHNIJGGH_00012 12149 4 Skin 0.24 protein_coding synonymous_variant LOW 453G>T Pro151Pro
M0077222 DHNIJGGH_00012 12161 4 Skin 0.24 protein_coding synonymous_variant LOW 441T>C Tyr147Tyr
M0077223 DHNIJGGH_00012 12203 4 Skin 0.24 protein_coding synonymous_variant LOW 399T>G Pro133Pro
M0077224 DHNIJGGH_00012 12251 4 Skin 0.24 protein_coding synonymous_variant LOW 351T>C Ser117Ser
M0077225 DHNIJGGH_00012 12299 3 Skin 0.18 protein_coding synonymous_variant LOW 303A>G Ala101Ala
M0077226 DHNIJGGH_00012 12347 5 Skin 0.29 protein_coding synonymous_variant LOW 255C>T Val85Val
M0077227 DHNIJGGH_00012 12362 3 Skin 0.18 protein_coding synonymous_variant LOW 240T>A Ile80Ile
M0077228 DHNIJGGH_00012 12365 3 Skin 0.18 protein_coding synonymous_variant LOW 237C>A Ala79Ala
M0077229 DHNIJGGH_00012 12368 3 Skin 0.18 protein_coding synonymous_variant LOW 234G>A Lys78Lys
M0077230 DHNIJGGH_00012 12381 5 Skin 0.29 protein_coding missense_variant MODERATE 221T>C Val74Ala
M0077231 DHNIJGGH_00012 12404 5 Skin 0.29 protein_coding synonymous_variant LOW 198A>C Thr66Thr
M0077232 DHNIJGGH_00012 12455 4 Skin 0.24 protein_coding synonymous_variant LOW 147T>C Thr49Thr
M0077233 DHNIJGGH_00013 12713 4 Skin 0.24 protein_coding synonymous_variant LOW 639C>T Asp213Asp
M0077234 DHNIJGGH_00013 12806 3 Skin 0.18 protein_coding synonymous_variant LOW 546T>A Ile182Ile
M0077235 DHNIJGGH_00013 12830 4 Skin 0.24 protein_coding synonymous_variant LOW 522T>A Arg174Arg
M0077236 DHNIJGGH_00013 12941 4 Skin 0.24 protein_coding synonymous_variant LOW 411G>A Ala137Ala
M0077237 DHNIJGGH_00013 13202 3 Skin 0.18 protein_coding synonymous_variant LOW 150A>G Glu50Glu
M0077238 DHNIJGGH_00013 13237 4 Skin 0.24 protein_coding synonymous_variant LOW 115C>T Leu39Leu
M0077239 DHNIJGGH_00013 13256 5 Skin 0.29 protein_coding synonymous_variant LOW 96A>T Pro32Pro
M0077240 DHNIJGGH_00015 14256 3 Skin 0.18 protein_coding missense_variant MODERATE 1189A>G Ile397Val
M0077241 DHNIJGGH_00015 14299 3 Skin 0.18 protein_coding synonymous_variant LOW 1146T>C Thr382Thr
M0077242 DHNIJGGH_00015 14323 3 Skin 0.18 protein_coding synonymous_variant LOW 1122C>G Gly374Gly
M0077243 DHNIJGGH_00015 14344 3 Skin 0.18 protein_coding synonymous_variant LOW 1101C>A Leu367Leu
M0077244 DHNIJGGH_00015 14443 4 Skin 0.24 protein_coding synonymous_variant LOW 1002T>C Gly334Gly
M0077245 DHNIJGGH_00015 14710 3 Skin 0.18 protein_coding synonymous_variant LOW 735G>A Ala245Ala
M0077246 DHNIJGGH_00015 14743 3 Skin 0.18 protein_coding synonymous_variant LOW 702A>G Ala234Ala
M0077247 DHNIJGGH_00015 14815 3 Skin 0.18 protein_coding synonymous_variant LOW 630G>A Arg210Arg
M0077248 DHNIJGGH_00015 14827 3 Skin 0.18 protein_coding synonymous_variant LOW 618A>G Glu206Glu
M0077249 DHNIJGGH_00015 15041 3 Skin 0.18 protein_coding missense_variant MODERATE 404A>C Tyr135Ser
M0077250 DHNIJGGH_00015 15391 3 Skin 0.18 protein_coding missense_variant MODERATE 54T>A His18Gln
M0077251 DHNIJGGH_00015 15407 3 Skin 0.18 protein_coding missense_variant MODERATE 38A>T Glu13Val
M0077252 DHNIJGGH_00016 15909 5 Skin 0.29 protein_coding synonymous_variant LOW 843T>C Ile281Ile
M0077253 DHNIJGGH_00016 15939 3 Skin 0.18 protein_coding synonymous_variant LOW 813A>G Leu271Leu
M0077254 DHNIJGGH_00016 16062 4 Skin 0.24 protein_coding synonymous_variant LOW 690A>G Ala230Ala
M0077255 DHNIJGGH_00016 16080 3 Skin 0.18 protein_coding synonymous_variant LOW 672T>C Thr224Thr
M0077256 DHNIJGGH_00016 16218 3 Skin 0.18 protein_coding synonymous_variant LOW 534G>A Gly178Gly
M0077257 DHNIJGGH_00016 16485 4 Skin 0.24 protein_coding synonymous_variant LOW 267G>A Gly89Gly
M0077258 DHNIJGGH_00017 17000 4 Skin 0.24 protein_coding synonymous_variant LOW 945C>T Thr315Thr
M0077259 DHNIJGGH_00017 17111 3 Skin 0.18 protein_coding synonymous_variant LOW 834T>C Asn278Asn
M0077260 DHNIJGGH_00017 17180 3 Skin 0.18 protein_coding synonymous_variant LOW 765G>A Ala255Ala
M0077261 DHNIJGGH_00017 17405 4 Skin 0.24 protein_coding synonymous_variant LOW 540C>T Gly180Gly
M0077262 DHNIJGGH_00017 17504 5 Skin 0.29 protein_coding synonymous_variant LOW 441T>C Tyr147Tyr
M0077263 DHNIJGGH_00017 17558 4 Skin 0.24 protein_coding synonymous_variant LOW 387A>G Ala129Ala
M0077264 DHNIJGGH_00018 18408 3 Skin 0.18 protein_coding synonymous_variant LOW 147T>C Ser49Ser
M0077265 DHNIJGGH_00018 18712 5 Skin 0.29 protein_coding synonymous_variant LOW 451T>C Leu151Leu
M0077266 DHNIJGGH_00018 18786 4 Skin 0.24 protein_coding synonymous_variant LOW 525T>C Ala175Ala
M0077267 DHNIJGGH_00018 18792 4 Skin 0.24 protein_coding synonymous_variant LOW 531T>C Ile177Ile
M0077268 DHNIJGGH_00018 18799 4 Skin 0.24 protein_coding synonymous_variant LOW 538T>C Leu180Leu
M0077269 DHNIJGGH_00018 19002 5 Skin 0.29 protein_coding synonymous_variant LOW 741A>G Gly247Gly
M0077270 DHNIJGGH_00019 19267 4 Skin 0.24 protein_coding synonymous_variant LOW 183G>A Ala61Ala
M0077271 DHNIJGGH_00019 19417 5 Skin 0.29 protein_coding synonymous_variant LOW 333T>C Thr111Thr
M0077272 DHNIJGGH_00019 19465 5 Skin 0.29 protein_coding synonymous_variant LOW 381T>A Ser127Ser
M0077273 DHNIJGGH_00019 19470 6 Skin 0.35 protein_coding missense_variant MODERATE 386C>T Ala129Val
M0077274 DHNIJGGH_00019 19723 6 Skin 0.35 protein_coding synonymous_variant LOW 639A>C Ser213Ser
M0077275 DHNIJGGH_00015 19897 8 Skin 0.47 protein_coding upstream_gene_variant MODIFIER -4453T>G None
M0077276 DHNIJGGH_00020 20059 4 Skin 0.24 protein_coding synonymous_variant LOW 162A>G Lys54Lys
M0077277 DHNIJGGH_00020 20062 4 Skin 0.24 protein_coding synonymous_variant LOW 165G>A Leu55Leu
M0077278 DHNIJGGH_00020 20110 6 Skin 0.35 protein_coding synonymous_variant LOW 213C>A Ala71Ala
M0077279 DHNIJGGH_00020 20141 6 Skin 0.35 protein_coding synonymous_variant LOW 244C>T Leu82Leu
M0077280 DHNIJGGH_00020 20314 4 Skin 0.24 protein_coding synonymous_variant LOW 417C>T Ile139Ile
M0077281 DHNIJGGH_00020 20329 6 Skin 0.35 protein_coding synonymous_variant LOW 432T>C Phe144Phe
M0077282 DHNIJGGH_00020 20353 6 Skin 0.35 protein_coding synonymous_variant LOW 456C>G Val152Val
M0077283 DHNIJGGH_00020 20407 3 Skin 0.18 protein_coding synonymous_variant LOW 510C>T Asn170Asn
M0077284 DHNIJGGH_00020 20437 5 Skin 0.29 protein_coding synonymous_variant LOW 540T>A Pro180Pro
M0077285 DHNIJGGH_00020 20806 5 Skin 0.29 protein_coding synonymous_variant LOW 909C>T Asp303Asp
M0077286 DHNIJGGH_00020 20809 3 Skin 0.18 protein_coding synonymous_variant LOW 912T>C Arg304Arg
M0077287 DHNIJGGH_00020 20855 3 Skin 0.18 protein_coding synonymous_variant LOW 958C>T Leu320Leu
M0077288 DHNIJGGH_00020 20876 4 Skin 0.24 protein_coding missense_variant MODERATE 979A>G Thr327Ala
M0077289 DHNIJGGH_00020 20899 4 Skin 0.24 protein_coding synonymous_variant LOW 1002A>T Thr334Thr
M0077290 DHNIJGGH_00020 20905 3 Skin 0.18 protein_coding synonymous_variant LOW 1008A>G Thr336Thr
M0077291 DHNIJGGH_00020 20908 4 Skin 0.24 protein_coding synonymous_variant LOW 1011G>A Thr337Thr
M0077292 DHNIJGGH_00020 20965 4 Skin 0.24 protein_coding synonymous_variant LOW 1068G>A Ala356Ala
M0077293 DHNIJGGH_00020 21079 4 Skin 0.24 protein_coding synonymous_variant LOW 1182A>G Gln394Gln
M0077294 DHNIJGGH_00020 21107 6 Skin 0.35 protein_coding missense_variant MODERATE 1210A>G Ser404Gly
M0077295 DHNIJGGH_00020 21129 3 Skin 0.18 protein_coding missense_variant MODERATE 1232A>C Asp411Ala
M0077296 DHNIJGGH_00020 21148 3 Skin 0.18 protein_coding synonymous_variant LOW 1251C>T Val417Val
M0077297 DHNIJGGH_00020 21157 3 Skin 0.18 protein_coding synonymous_variant LOW 1260T>C Arg420Arg
M0077298 DHNIJGGH_00020 21250 3 Skin 0.18 protein_coding synonymous_variant LOW 1353A>G Leu451Leu
M0077299 DHNIJGGH_00020 21259 3 Skin 0.18 protein_coding synonymous_variant LOW 1362A>G Pro454Pro
M0077300 DHNIJGGH_00020 21298 3 Skin 0.18 protein_coding synonymous_variant LOW 1401C>T Asp467Asp
M0077301 DHNIJGGH_00021 21460 3 Skin 0.18 protein_coding synonymous_variant LOW 24C>T Asp8Asp
M0077302 DHNIJGGH_00021 21541 3 Skin 0.18 protein_coding synonymous_variant LOW 105A>G Gln35Gln
M0077303 DHNIJGGH_00021 21547 7 Skin 0.41 protein_coding synonymous_variant LOW 111A>G Leu37Leu
M0077304 DHNIJGGH_00021 21622 4 Skin 0.24 protein_coding synonymous_variant LOW 186T>C Asp62Asp
M0077305 DHNIJGGH_00021 22051 4 Skin 0.24 protein_coding synonymous_variant LOW 615T>G Thr205Thr
M0077306 DHNIJGGH_00021 22054 4 Skin 0.24 protein_coding synonymous_variant LOW 618G>T Ala206Ala
M0077307 DHNIJGGH_00021 22075 5 Skin 0.29 protein_coding synonymous_variant LOW 639A>G Lys213Lys
M0077308 DHNIJGGH_00021 22081 5 Skin 0.29 protein_coding synonymous_variant LOW 645A>G Leu215Leu
M0077309 DHNIJGGH_00021 22120 6 Skin 0.35 protein_coding synonymous_variant LOW 684T>A Pro228Pro
M0077310 DHNIJGGH_00021 22174 3 Skin 0.18 protein_coding synonymous_variant LOW 738G>A Val246Val
M0077311 DHNIJGGH_00021 22264 6 Skin 0.35 protein_coding synonymous_variant LOW 828A>G Lys276Lys
M0077312 DHNIJGGH_00021 22375 6 Skin 0.35 protein_coding synonymous_variant LOW 939G>A Leu313Leu
M0077313 DHNIJGGH_00021 22408 6 Skin 0.35 protein_coding synonymous_variant LOW 972A>G Ala324Ala
M0077314 DHNIJGGH_00021 22618 4 Skin 0.24 protein_coding synonymous_variant LOW 1182T>A Ala394Ala
M0077315 DHNIJGGH_00017 22672 3 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4728G>T None
M0077316 DHNIJGGH_00022 23029 3 Skin 0.18 protein_coding synonymous_variant LOW 276T>C Pro92Pro
M0077317 DHNIJGGH_00022 23041 3 Skin 0.18 protein_coding synonymous_variant LOW 288C>T Leu96Leu
M0077318 DHNIJGGH_00022 23507 3 Skin 0.18 protein_coding synonymous_variant LOW 754T>C Leu252Leu
M0077319 DHNIJGGH_00022 23510 3 Skin 0.18 protein_coding synonymous_variant LOW 757C>T Leu253Leu
M0077320 DHNIJGGH_00022 23512 3 Skin 0.18 protein_coding synonymous_variant LOW 759G>A Leu253Leu
M0077321 DHNIJGGH_00022 23518 3 Skin 0.18 protein_coding synonymous_variant LOW 765T>A Ala255Ala
M0077322 DHNIJGGH_00022 23551 4 Skin 0.24 protein_coding synonymous_variant LOW 798G>A Leu266Leu
M0077323 DHNIJGGH_00024 23649 6 Skin 0.35 protein_coding upstream_gene_variant MODIFIER -1449G>C None
M0077324 DHNIJGGH_00023 23917 5 Skin 0.29 protein_coding synonymous_variant LOW 972A>G Gly324Gly
M0077325 DHNIJGGH_00023 23995 5 Skin 0.29 protein_coding synonymous_variant LOW 894T>C Ala298Ala
M0077326 DHNIJGGH_00023 24066 5 Skin 0.29 protein_coding missense_variant MODERATE 823T>C Ser275Pro
M0077327 DHNIJGGH_00023 24073 4 Skin 0.24 protein_coding synonymous_variant LOW 816C>T Ile272Ile
M0077328 DHNIJGGH_00023 24076 4 Skin 0.24 protein_coding synonymous_variant LOW 813T>C Ser271Ser
M0077329 DHNIJGGH_00023 24103 4 Skin 0.24 protein_coding synonymous_variant LOW 786T>C Asp262Asp
M0077330 DHNIJGGH_00023 24232 3 Skin 0.18 protein_coding synonymous_variant LOW 657G>A Ser219Ser
M0077331 DHNIJGGH_00023 24250 4 Skin 0.24 protein_coding synonymous_variant LOW 639C>G Thr213Thr
M0077332 DHNIJGGH_00023 24280 4 Skin 0.24 protein_coding synonymous_variant LOW 609A>G Gly203Gly
M0077333 DHNIJGGH_00023 24466 3 Skin 0.18 protein_coding synonymous_variant LOW 423T>A Ala141Ala
M0077334 DHNIJGGH_00023 25021 4 Skin 0.24 protein_coding upstream_gene_variant MODIFIER -133T>A None
M0077335 DHNIJGGH_00012 12383 3 Skin 0.18 protein_coding synonymous_variant LOW 219G>A Ser73Ser
M0077336 DHNIJGGH_00020 20494 3 Skin 0.18 protein_coding synonymous_variant LOW 597C>T Gly199Gly
M0077337 DHNIJGGH_00020 20536 4 Skin 0.24 protein_coding synonymous_variant LOW 639T>C Ile213Ile
M0077338 DHNIJGGH_00020 20539 5 Skin 0.29 protein_coding synonymous_variant LOW 642C>T Ser214Ser
M0077339 DHNIJGGH_00020 20542 4 Skin 0.24 protein_coding synonymous_variant LOW 645G>A Glu215Glu
M0077340 DHNIJGGH_00020 20548 4 Skin 0.24 protein_coding synonymous_variant LOW 651C>T Asp217Asp
M0077341 DHNIJGGH_00020 20551 4 Skin 0.24 protein_coding synonymous_variant LOW 654A>T Arg218Arg
M0077342 DHNIJGGH_00020 20554 4 Skin 0.24 protein_coding synonymous_variant LOW 657C>T Ile219Ile
M0077343 DHNIJGGH_00020 20584 5 Skin 0.29 protein_coding synonymous_variant LOW 687T>C Gly229Gly
M0077344 DHNIJGGH_00013 18122 3 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4771A>C None
M0077345 DHNIJGGH_00018 18891 3 Skin 0.18 protein_coding synonymous_variant LOW 630G>A Gln210Gln
M0077346 DHNIJGGH_00019 19168 5 Skin 0.29 protein_coding missense_variant MODERATE 84A>C Glu28Asp
M0077347 DHNIJGGH_00019 19177 4 Skin 0.24 protein_coding synonymous_variant LOW 93A>G Val31Val
M0077348 DHNIJGGH_00019 19201 5 Skin 0.29 protein_coding synonymous_variant LOW 117A>G Leu39Leu
M0077349 DHNIJGGH_00019 19522 5 Skin 0.29 protein_coding synonymous_variant LOW 438A>G Leu146Leu
M0077350 DHNIJGGH_00019 19549 4 Skin 0.24 protein_coding synonymous_variant LOW 465C>T Ile155Ile
M0077351 DHNIJGGH_00019 19567 4 Skin 0.24 protein_coding synonymous_variant LOW 483C>G Thr161Thr
M0077352 DHNIJGGH_00019 19580 5 Skin 0.29 protein_coding synonymous_variant LOW 496T>C Leu166Leu
M0077353 DHNIJGGH_00019 19636 4 Skin 0.24 protein_coding synonymous_variant LOW 552A>G Glu184Glu
M0077354 DHNIJGGH_00020 20284 4 Skin 0.24 protein_coding synonymous_variant LOW 387T>A Ala129Ala
M0077355 DHNIJGGH_00020 20287 4 Skin 0.24 protein_coding synonymous_variant LOW 390A>G Ala130Ala
M0077356 DHNIJGGH_00020 20515 3 Skin 0.18 protein_coding synonymous_variant LOW 618A>G Leu206Leu
M0077357 DHNIJGGH_00020 20563 4 Skin 0.24 protein_coding synonymous_variant LOW 666T>C Asp222Asp
M0077358 DHNIJGGH_00020 20587 4 Skin 0.24 protein_coding synonymous_variant LOW 690T>C Pro230Pro
M0077359 DHNIJGGH_00020 20689 4 Skin 0.24 protein_coding synonymous_variant LOW 792T>C Leu264Leu
M0077360 DHNIJGGH_00020 20719 4 Skin 0.24 protein_coding synonymous_variant LOW 822A>G Leu274Leu
M0077361 DHNIJGGH_00020 21214 3 Skin 0.18 protein_coding synonymous_variant LOW 1317G>A Thr439Thr
M0077362 DHNIJGGH_00021 22150 3 Skin 0.18 protein_coding synonymous_variant LOW 714C>T Leu238Leu
M0077363 DHNIJGGH_00021 22462 4 Skin 0.24 protein_coding synonymous_variant LOW 1026C>T Asp342Asp
M0077364 DHNIJGGH_00022 22813 3 Skin 0.18 protein_coding synonymous_variant LOW 60T>C Arg20Arg
M0077365 DHNIJGGH_00022 23332 5 Skin 0.29 protein_coding synonymous_variant LOW 579G>A Glu193Glu
M0077366 DHNIJGGH_00023 23752 3 Skin 0.18 protein_coding synonymous_variant LOW 1137A>C Gly379Gly
M0077367 DHNIJGGH_00035 37181 3 Skin 0.18 protein_coding synonymous_variant LOW 1392T>C Phe464Phe
M0077368 DHNIJGGH_00035 37247 3 Skin 0.18 protein_coding synonymous_variant LOW 1458A>G Gly486Gly
M0077369 DHNIJGGH_00035 37309 3 Skin 0.18 protein_coding missense_variant MODERATE 1520T>C Val507Ala
M0077370 DHNIJGGH_00035 37379 3 Skin 0.18 protein_coding synonymous_variant LOW 1590A>G Leu530Leu
M0077371 DHNIJGGH_00029 37435 3 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4684T>C None
M0077372 DHNIJGGH_00010 9796 3 Skin 0.18 protein_coding synonymous_variant LOW 207C>T Gly69Gly
M0077373 DHNIJGGH_00010 9847 3 Skin 0.18 protein_coding synonymous_variant LOW 258G>A Leu86Leu
M0077374 DHNIJGGH_00010 9865 3 Skin 0.18 protein_coding synonymous_variant LOW 276A>G Arg92Arg
M0077375 DHNIJGGH_00011 10035 3 Skin 0.18 protein_coding synonymous_variant LOW 1218T>C His406His
M0077376 DHNIJGGH_00011 10413 3 Skin 0.18 protein_coding synonymous_variant LOW 840G>A Gln280Gln
M0077377 DHNIJGGH_00011 10587 3 Skin 0.18 protein_coding synonymous_variant LOW 666C>A Arg222Arg
M0077378 DHNIJGGH_00013 13283 3 Skin 0.18 protein_coding synonymous_variant LOW 69T>C Ser23Ser
M0077379 DHNIJGGH_00020 20188 3 Skin 0.18 protein_coding synonymous_variant LOW 291C>T Asp97Asp
M0077380 DHNIJGGH_00020 21364 3 Skin 0.18 protein_coding synonymous_variant LOW 1467G>A Pro489Pro
M0077381 DHNIJGGH_00021 21505 4 Skin 0.24 protein_coding synonymous_variant LOW 69G>A Ser23Ser
M0077382 DHNIJGGH_00021 21511 4 Skin 0.24 protein_coding synonymous_variant LOW 75T>C Arg25Arg
M0077383 DHNIJGGH_00021 21562 3 Skin 0.18 protein_coding synonymous_variant LOW 126C>T Gly42Gly
M0077384 DHNIJGGH_00021 21739 3 Skin 0.18 protein_coding synonymous_variant LOW 303C>T Arg101Arg
M0077385 DHNIJGGH_00022 23464 3 Skin 0.18 protein_coding synonymous_variant LOW 711C>A Ser237Ser
M0077386 DHNIJGGH_00022 23470 3 Skin 0.18 protein_coding synonymous_variant LOW 717C>T His239His
M0077387 DHNIJGGH_00022 23473 3 Skin 0.18 protein_coding synonymous_variant LOW 720T>C Gly240Gly






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
DHNIJGGH_00027 2.A.1.15.4 91.7 2.7e-214 5 415 0.9904 0.9952 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)