Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C3210
  Reference Plasmid   MET0381_bin.1__k81_4179
  Reference Plasmid Size   22920
  Reference Plasmid GC Content   0.61
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0079872 IFCBOHHC_00001 105 62 Skin 0.48 protein_coding upstream_gene_variant MODIFIER -60A>G None
M0079873 IFCBOHHC_00001 135 62 Skin 0.48 protein_coding upstream_gene_variant MODIFIER -30A>G None
M0079874 IFCBOHHC_00001 138 62 Skin 0.48 protein_coding upstream_gene_variant MODIFIER -27T>C None
M0079875 IFCBOHHC_00001 144 61 Skin 0.47 protein_coding upstream_gene_variant MODIFIER -21G>A None
M0079876 IFCBOHHC_00002 1325 32 Skin 0.25 protein_coding missense_variant MODERATE 742C>G His248Asp
M0079877 IFCBOHHC_00004 3122 8 Skin 0.06 protein_coding missense_variant MODERATE 766G>A Ala256Thr
M0079878 IFCBOHHC_00007 5573 4 Skin 0.03 protein_coding missense_variant MODERATE 617A>G Asp206Gly
M0079879 IFCBOHHC_00011 9068 45 Skin 0.35 protein_coding missense_variant MODERATE 195A>C Lys65Asn
M0079880 IFCBOHHC_00015 11670 48 Skin 0.37 protein_coding missense_variant MODERATE 115C>G Pro39Ala
M0079881 IFCBOHHC_00015 11686 48 Skin 0.37 protein_coding missense_variant MODERATE 131C>G Pro44Arg
M0079882 IFCBOHHC_00019 15809 3 Skin 0.02 protein_coding missense_variant MODERATE 206C>T Thr69Met
M0079883 IFCBOHHC_00021 17084 3 Skin 0.02 protein_coding missense_variant MODERATE 253C>G Pro85Ala
M0079884 IFCBOHHC_00021 17101 3 Skin 0.02 protein_coding synonymous_variant LOW 270G>A Arg90Arg
M0079885 IFCBOHHC_00021 17119 3 Skin 0.02 protein_coding synonymous_variant LOW 288C>G Thr96Thr
M0079886 IFCBOHHC_00021 17161 3 Skin 0.02 protein_coding synonymous_variant LOW 330C>T Val110Val
M0079887 IFCBOHHC_00021 17171 3 Skin 0.02 protein_coding missense_variant MODERATE 340T>G Phe114Val
M0079888 IFCBOHHC_00021 17173 3 Skin 0.02 protein_coding synonymous_variant LOW 342T>C Phe114Phe
M0079889 IFCBOHHC_00021 17205 3 Skin 0.02 protein_coding missense_variant MODERATE 374A>G Gln125Arg
M0079890 IFCBOHHC_00021 17225 3 Skin 0.02 protein_coding missense_variant MODERATE 394C>T Pro132Ser
M0079891 IFCBOHHC_00021 17236 3 Skin 0.02 protein_coding synonymous_variant LOW 405C>T Ile135Ile
M0079892 IFCBOHHC_00021 17255 3 Skin 0.02 protein_coding missense_variant MODERATE 424C>G His142Asp
M0079893 IFCBOHHC_00021 17287 3 Skin 0.02 protein_coding synonymous_variant LOW 456G>A Glu152Glu
M0079894 IFCBOHHC_00021 17368 3 Skin 0.02 protein_coding synonymous_variant LOW 537A>G Ala179Ala
M0079895 IFCBOHHC_00021 17371 3 Skin 0.02 protein_coding synonymous_variant LOW 540C>T Cys180Cys
M0079896 IFCBOHHC_00021 17387 3 Skin 0.02 protein_coding synonymous_variant LOW 556C>T Leu186Leu
M0079897 IFCBOHHC_00021 17389 3 Skin 0.02 protein_coding synonymous_variant LOW 558G>A Leu186Leu
M0079898 IFCBOHHC_00021 17434 3 Skin 0.02 protein_coding synonymous_variant LOW 603C>T Tyr201Tyr
M0079899 IFCBOHHC_00021 17494 3 Skin 0.02 protein_coding synonymous_variant LOW 663A>G Glu221Glu
M0079900 IFCBOHHC_00021 17503 3 Skin 0.02 protein_coding synonymous_variant LOW 672A>G Gly224Gly
M0079901 IFCBOHHC_00021 17521 3 Skin 0.02 protein_coding synonymous_variant LOW 690A>G Gln230Gln
M0079902 IFCBOHHC_00021 17536 3 Skin 0.02 protein_coding synonymous_variant LOW 705A>C Pro235Pro
M0079903 IFCBOHHC_00021 17542 3 Skin 0.02 protein_coding synonymous_variant LOW 711C>T Ser237Ser
M0079904 IFCBOHHC_00021 17547 3 Skin 0.02 protein_coding missense_variant MODERATE 716T>C Met239Thr
M0079905 IFCBOHHC_00021 17560 3 Skin 0.02 protein_coding synonymous_variant LOW 729T>C Asn243Asn
M0079906 IFCBOHHC_00021 17569 3 Skin 0.02 protein_coding synonymous_variant LOW 738C>G Ala246Ala
M0079907 IFCBOHHC_00021 17581 3 Skin 0.02 protein_coding synonymous_variant LOW 750G>A Glu250Glu
M0079908 IFCBOHHC_00021 17614 12 Skin 0.09 protein_coding missense_variant MODERATE 783A>C Glu261Asp
M0079909 IFCBOHHC_00021 17623 3 Skin 0.02 protein_coding synonymous_variant LOW 792A>G Glu264Glu
M0079910 IFCBOHHC_00021 17707 4 Skin 0.03 protein_coding synonymous_variant LOW 876G>A Pro292Pro
M0079911 IFCBOHHC_00021 17740 4 Skin 0.03 protein_coding synonymous_variant LOW 909T>C Pro303Pro
M0079912 IFCBOHHC_00021 17745 3 Skin 0.02 protein_coding missense_variant MODERATE 914C>T Ala305Val
M0079913 IFCBOHHC_00021 17748 3 Skin 0.02 protein_coding missense_variant MODERATE 917C>G Ser306Cys
M0079914 IFCBOHHC_00021 17765 3 Skin 0.02 protein_coding synonymous_variant LOW 934T>C Leu312Leu
M0079915 IFCBOHHC_00021 17767 3 Skin 0.02 protein_coding synonymous_variant LOW 936A>G Leu312Leu
M0079916 IFCBOHHC_00021 17770 3 Skin 0.02 protein_coding synonymous_variant LOW 939C>G Pro313Pro
M0079917 IFCBOHHC_00021 17771 3 Skin 0.02 protein_coding missense_variant MODERATE 940G>A Asp314Asn
M0079918 IFCBOHHC_00021 17772 3 Skin 0.02 protein_coding missense_variant MODERATE 941A>G Asp314Gly
M0079919 IFCBOHHC_00021 17773 3 Skin 0.02 protein_coding synonymous_variant LOW 942T>C Asp314Asp
M0079920 IFCBOHHC_00021 17830 3 Skin 0.02 protein_coding synonymous_variant LOW 999T>C Val333Val
M0079921 IFCBOHHC_00021 17833 3 Skin 0.02 protein_coding synonymous_variant LOW 1002T>C Ser334Ser
M0079922 IFCBOHHC_00021 17857 3 Skin 0.02 protein_coding synonymous_variant LOW 1026C>T Ser342Ser
M0079923 IFCBOHHC_00021 17872 3 Skin 0.02 protein_coding synonymous_variant LOW 1041A>G Thr347Thr
M0079924 IFCBOHHC_00021 17887 3 Skin 0.02 protein_coding synonymous_variant LOW 1056C>T Asp352Asp
M0079925 IFCBOHHC_00021 17900 3 Skin 0.02 protein_coding synonymous_variant LOW 1069C>T Leu357Leu
M0079926 IFCBOHHC_00021 17915 3 Skin 0.02 protein_coding missense_variant MODERATE 1084G>C Ala362Pro
M0079927 IFCBOHHC_00021 17917 3 Skin 0.02 protein_coding synonymous_variant LOW 1086C>A Ala362Ala
M0079928 IFCBOHHC_00021 18084 3 Skin 0.02 protein_coding missense_variant MODERATE 1253A>G Glu418Gly
M0079929 IFCBOHHC_00021 18460 3 Skin 0.02 protein_coding synonymous_variant LOW 1629T>C Cys543Cys
M0079930 IFCBOHHC_00021 18486 3 Skin 0.02 protein_coding missense_variant MODERATE 1655T>C Val552Ala
M0079931 IFCBOHHC_00001 57 62 Skin 0.48 protein_coding upstream_gene_variant MODIFIER -108T>G None
M0079932 IFCBOHHC_00004 2562 11 Skin 0.08 protein_coding missense_variant MODERATE 206A>G His69Arg
M0079933 IFCBOHHC_00004 3299 13 Skin 0.10 protein_coding missense_variant MODERATE 943A>G Thr315Ala
M0079934 IFCBOHHC_00008 6200 12 Skin 0.09 protein_coding missense_variant MODERATE 1108A>G Thr370Ala
M0079935 IFCBOHHC_00006 7326 9 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -2402A>G None
M0079936 IFCBOHHC_00009 7427 9 Skin 0.07 protein_coding synonymous_variant LOW 429G>A Thr143Thr
M0079937 IFCBOHHC_00010 8529 10 Skin 0.08 protein_coding synonymous_variant LOW 139C>T Leu47Leu
M0079938 IFCBOHHC_00002 754 11 Skin 0.08 protein_coding synonymous_variant LOW 171C>T Gly57Gly
M0079939 IFCBOHHC_00002 761 9 Skin 0.07 protein_coding missense_variant MODERATE 178A>G Thr60Ala
M0079940 IFCBOHHC_00004 3016 14 Skin 0.11 protein_coding synonymous_variant LOW 660T>A Ser220Ser
M0079941 IFCBOHHC_00004 3048 7 Skin 0.05 protein_coding missense_variant MODERATE 692A>G Glu231Gly
M0079942 IFCBOHHC_00006 4332 21 Skin 0.16 protein_coding missense_variant MODERATE 593C>A Ala198Glu
M0079943 IFCBOHHC_00004 2435 14 Skin 0.11 protein_coding missense_variant MODERATE 79A>G Thr27Ala
M0079944 IFCBOHHC_00004 2567 8 Skin 0.06 protein_coding missense_variant MODERATE 211G>A Gly71Arg
M0079945 IFCBOHHC_00001 192 12 Skin 0.09 protein_coding missense_variant MODERATE 28G>A Ala10Thr
M0079946 IFCBOHHC_00001 210 12 Skin 0.09 protein_coding missense_variant MODERATE 46G>A Ala16Thr
M0079947 IFCBOHHC_00001 303 14 Skin 0.11 protein_coding missense_variant MODERATE 139T>C Ser47Pro
M0079948 IFCBOHHC_00002 366 16 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -218T>C None
M0079949 IFCBOHHC_00002 461 17 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -123A>G None
M0079950 IFCBOHHC_00002 527 19 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -57C>T None
M0079951 IFCBOHHC_00002 532 19 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -52A>G None
M0079952 IFCBOHHC_00002 545 19 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -39T>C None
M0079953 IFCBOHHC_00002 556 16 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -28G>A None
M0079954 IFCBOHHC_00002 577 19 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -7G>A None
M0079955 IFCBOHHC_00002 592 19 Skin 0.15 protein_coding missense_variant MODERATE 9G>C Lys3Asn
M0079956 IFCBOHHC_00002 609 19 Skin 0.15 protein_coding missense_variant MODERATE 26T>G Val9Gly
M0079957 IFCBOHHC_00002 655 20 Skin 0.15 protein_coding synonymous_variant LOW 72C>T Asp24Asp
M0079958 IFCBOHHC_00002 663 20 Skin 0.15 protein_coding missense_variant MODERATE 80G>A Gly27Asp
M0079959 IFCBOHHC_00002 672 18 Skin 0.14 protein_coding missense_variant MODERATE 89C>T Ser30Leu
M0079960 IFCBOHHC_00002 715 20 Skin 0.15 protein_coding synonymous_variant LOW 132T>C Ala44Ala
M0079961 IFCBOHHC_00002 734 20 Skin 0.15 protein_coding missense_variant MODERATE 151G>A Gly51Ser
M0079962 IFCBOHHC_00002 742 20 Skin 0.15 protein_coding synonymous_variant LOW 159T>C Ala53Ala
M0079963 IFCBOHHC_00002 743 18 Skin 0.14 protein_coding missense_variant MODERATE 160C>T His54Tyr
M0079964 IFCBOHHC_00002 762 20 Skin 0.15 protein_coding missense_variant MODERATE 179C>T Thr60Ile
M0079965 IFCBOHHC_00002 780 18 Skin 0.14 protein_coding missense_variant MODERATE 197C>T Thr66Ile
M0079966 IFCBOHHC_00002 800 21 Skin 0.16 protein_coding synonymous_variant LOW 217C>T Leu73Leu
M0079967 IFCBOHHC_00002 862 20 Skin 0.15 protein_coding synonymous_variant LOW 279G>A Ala93Ala
M0079968 IFCBOHHC_00002 886 20 Skin 0.15 protein_coding synonymous_variant LOW 303T>C Ala101Ala
M0079969 IFCBOHHC_00002 899 20 Skin 0.15 protein_coding missense_variant MODERATE 316A>G Ile106Val
M0079970 IFCBOHHC_00002 917 20 Skin 0.15 protein_coding missense_variant MODERATE 334A>G Thr112Ala
M0079971 IFCBOHHC_00002 919 20 Skin 0.15 protein_coding synonymous_variant LOW 336C>A Thr112Thr
M0079972 IFCBOHHC_00002 920 20 Skin 0.15 protein_coding missense_variant MODERATE 337G>A Ala113Thr
M0079973 IFCBOHHC_00002 991 3 Skin 0.02 protein_coding synonymous_variant LOW 408C>T Leu136Leu
M0079974 IFCBOHHC_00002 995 3 Skin 0.02 protein_coding missense_variant MODERATE 412G>A Glu138Lys
M0079975 IFCBOHHC_00002 1003 19 Skin 0.15 protein_coding synonymous_variant LOW 420A>G Val140Val
M0079976 IFCBOHHC_00002 1025 3 Skin 0.02 protein_coding missense_variant MODERATE 442T>A Ser148Thr
M0079977 IFCBOHHC_00002 1042 18 Skin 0.14 protein_coding synonymous_variant LOW 459C>T Arg153Arg
M0079978 IFCBOHHC_00002 1066 18 Skin 0.14 protein_coding synonymous_variant LOW 483T>C Leu161Leu
M0079979 IFCBOHHC_00002 1069 18 Skin 0.14 protein_coding synonymous_variant LOW 486C>T Tyr162Tyr
M0079980 IFCBOHHC_00002 1072 18 Skin 0.14 protein_coding synonymous_variant LOW 489T>C Gly163Gly
M0079981 IFCBOHHC_00002 1078 18 Skin 0.14 protein_coding synonymous_variant LOW 495G>A Gly165Gly
M0079982 IFCBOHHC_00002 1081 18 Skin 0.14 protein_coding synonymous_variant LOW 498G>A Leu166Leu
M0079983 IFCBOHHC_00002 1084 18 Skin 0.14 protein_coding synonymous_variant LOW 501T>C Arg167Arg
M0079984 IFCBOHHC_00002 1134 16 Skin 0.12 protein_coding missense_variant MODERATE 551G>A Arg184His
M0079985 IFCBOHHC_00002 1147 16 Skin 0.12 protein_coding synonymous_variant LOW 564T>C Val188Val
M0079986 IFCBOHHC_00002 1150 14 Skin 0.11 protein_coding synonymous_variant LOW 567G>A Thr189Thr
M0079987 IFCBOHHC_00002 1159 14 Skin 0.11 protein_coding synonymous_variant LOW 576C>T Gly192Gly
M0079988 IFCBOHHC_00002 1180 16 Skin 0.12 protein_coding synonymous_variant LOW 597T>C Pro199Pro
M0079989 IFCBOHHC_00002 1189 16 Skin 0.12 protein_coding synonymous_variant LOW 606G>A Ala202Ala
M0079990 IFCBOHHC_00002 1210 16 Skin 0.12 protein_coding synonymous_variant LOW 627T>C Asp209Asp
M0079991 IFCBOHHC_00002 1225 16 Skin 0.12 protein_coding synonymous_variant LOW 642T>C Arg214Arg
M0079992 IFCBOHHC_00002 1240 3 Skin 0.02 protein_coding synonymous_variant LOW 657T>C Val219Val
M0079993 IFCBOHHC_00002 1246 16 Skin 0.12 protein_coding synonymous_variant LOW 663G>A Pro221Pro
M0079994 IFCBOHHC_00002 1275 17 Skin 0.13 protein_coding missense_variant MODERATE 692C>A Ala231Glu
M0079995 IFCBOHHC_00002 1309 16 Skin 0.12 protein_coding synonymous_variant LOW 726G>A Arg242Arg
M0079996 IFCBOHHC_00002 1372 15 Skin 0.12 protein_coding synonymous_variant LOW 789A>G Leu263Leu
M0079997 IFCBOHHC_00002 1381 15 Skin 0.12 protein_coding synonymous_variant LOW 798G>T Ala266Ala
M0079998 IFCBOHHC_00002 1390 15 Skin 0.12 protein_coding synonymous_variant LOW 807C>T Thr269Thr
M0079999 IFCBOHHC_00002 1397 3 Skin 0.02 protein_coding missense_variant MODERATE 814T>G Leu272Val
M0080000 IFCBOHHC_00002 1435 15 Skin 0.12 protein_coding missense_variant MODERATE 852A>G Ile284Met
M0080001 IFCBOHHC_00003 1453 15 Skin 0.12 protein_coding stop_lost&splice_region_variant HIGH 757T>G Ter253Gluext*?
M0080002 IFCBOHHC_00003 1544 17 Skin 0.13 protein_coding synonymous_variant LOW 666C>T Ala222Ala
M0080003 IFCBOHHC_00003 1550 3 Skin 0.02 protein_coding synonymous_variant LOW 660C>T Thr220Thr
M0080004 IFCBOHHC_00003 1560 17 Skin 0.13 protein_coding missense_variant MODERATE 650C>T Thr217Met
M0080005 IFCBOHHC_00003 1568 17 Skin 0.13 protein_coding synonymous_variant LOW 642C>T Gly214Gly
M0080006 IFCBOHHC_00003 1592 24 Skin 0.18 protein_coding synonymous_variant LOW 618A>G Gly206Gly
M0080007 IFCBOHHC_00003 1895 15 Skin 0.12 protein_coding synonymous_variant LOW 315G>A Arg105Arg
M0080008 IFCBOHHC_00003 2087 13 Skin 0.10 protein_coding synonymous_variant LOW 123T>C Thr41Thr
M0080009 IFCBOHHC_00003 2092 9 Skin 0.07 protein_coding missense_variant MODERATE 118C>T Pro40Ser
M0080010 IFCBOHHC_00003 2119 12 Skin 0.09 protein_coding missense_variant MODERATE 91G>C Val31Leu
M0080011 IFCBOHHC_00003 2133 12 Skin 0.09 protein_coding missense_variant MODERATE 77A>G His26Arg
M0080012 IFCBOHHC_00003 2141 9 Skin 0.07 protein_coding synonymous_variant LOW 69T>C Ala23Ala
M0080013 IFCBOHHC_00003 2172 12 Skin 0.09 protein_coding missense_variant MODERATE 38C>T Thr13Met
M0080014 IFCBOHHC_00003 2211 10 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2A>G None
M0080015 IFCBOHHC_00003 2258 10 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -49T>G None
M0080016 IFCBOHHC_00003 2270 10 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -61G>A None
M0080017 IFCBOHHC_00003 2303 11 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -94A>G None
M0080018 IFCBOHHC_00003 2305 11 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -96C>T None
M0080019 IFCBOHHC_00003 2316 11 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -107A>T None
M0080020 IFCBOHHC_00003 2333 10 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -124A>G None
M0080021 IFCBOHHC_00003 2336 10 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -127G>T None
M0080022 IFCBOHHC_00004 2362 10 Skin 0.08 protein_coding synonymous_variant LOW 6T>C Ala2Ala
M0080023 IFCBOHHC_00004 2416 11 Skin 0.08 protein_coding missense_variant MODERATE 60T>G Ile20Met
M0080024 IFCBOHHC_00004 2454 11 Skin 0.08 protein_coding missense_variant MODERATE 98G>A Arg33His
M0080025 IFCBOHHC_00004 2470 9 Skin 0.07 protein_coding synonymous_variant LOW 114C>T Gly38Gly
M0080026 IFCBOHHC_00004 2518 13 Skin 0.10 protein_coding synonymous_variant LOW 162T>C Leu54Leu
M0080027 IFCBOHHC_00004 2533 13 Skin 0.10 protein_coding synonymous_variant LOW 177C>T Cys59Cys
M0080028 IFCBOHHC_00004 2603 9 Skin 0.07 protein_coding missense_variant MODERATE 247A>G Lys83Glu
M0080029 IFCBOHHC_00004 2674 10 Skin 0.08 protein_coding synonymous_variant LOW 318G>A Ser106Ser
M0080030 IFCBOHHC_00004 2719 9 Skin 0.07 protein_coding synonymous_variant LOW 363T>C Thr121Thr
M0080031 IFCBOHHC_00004 2727 9 Skin 0.07 protein_coding missense_variant MODERATE 371A>G Asn124Ser
M0080032 IFCBOHHC_00004 2762 18 Skin 0.14 protein_coding missense_variant MODERATE 406A>G Arg136Gly
M0080033 IFCBOHHC_00004 2785 10 Skin 0.08 protein_coding synonymous_variant LOW 429G>A Glu143Glu
M0080034 IFCBOHHC_00004 2845 10 Skin 0.08 protein_coding synonymous_variant LOW 489C>G Leu163Leu
M0080035 IFCBOHHC_00004 2961 7 Skin 0.05 protein_coding missense_variant MODERATE 605G>A Arg202His
M0080036 IFCBOHHC_00004 2969 8 Skin 0.06 protein_coding missense_variant MODERATE 613A>G Ile205Val
M0080037 IFCBOHHC_00004 3227 18 Skin 0.14 protein_coding missense_variant MODERATE 871A>G Ile291Val
M0080038 IFCBOHHC_00007 5043 5 Skin 0.04 protein_coding synonymous_variant LOW 87T>C Leu29Leu
M0080039 IFCBOHHC_00008 6323 5 Skin 0.04 protein_coding missense_variant MODERATE 985G>A Glu329Lys
M0080040 IFCBOHHC_00009 7585 3 Skin 0.02 protein_coding missense_variant MODERATE 271A>G Lys91Glu
M0080041 IFCBOHHC_00006 8857 6 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3933T>C None
M0080042 IFCBOHHC_00013 10919 5 Skin 0.04 protein_coding missense_variant MODERATE 136G>A Gly46Arg
M0080043 IFCBOHHC_00011 9419 3 Skin 0.02 protein_coding synonymous_variant LOW 546C>G Thr182Thr
M0080044 IFCBOHHC_00013 10428 7 Skin 0.05 protein_coding synonymous_variant LOW 627C>G Val209Val
M0080045 IFCBOHHC_00018 14306 7 Skin 0.05 protein_coding missense_variant MODERATE 1150G>A Ala384Thr
M0080046 IFCBOHHC_00018 14625 8 Skin 0.06 protein_coding synonymous_variant LOW 831G>C Leu277Leu
M0080047 IFCBOHHC_00013 10438 10 Skin 0.08 protein_coding missense_variant MODERATE 617T>C Val206Ala
M0080048 IFCBOHHC_00021 18664 7 Skin 0.05 protein_coding synonymous_variant LOW 1833T>C Gly611Gly
M0080049 IFCBOHHC_00022 18936 7 Skin 0.05 protein_coding synonymous_variant LOW 339G>A Ala113Ala
M0080050 IFCBOHHC_00024 20519 4 Skin 0.03 protein_coding missense_variant MODERATE 491A>G Glu164Gly
M0080051 IFCBOHHC_00024 20560 4 Skin 0.03 protein_coding synonymous_variant LOW 450C>G Arg150Arg
M0080052 IFCBOHHC_00004 2644 6 Skin 0.05 protein_coding synonymous_variant LOW 288G>A Gly96Gly
M0080053 IFCBOHHC_00005 3979 12 Skin 0.09 protein_coding synonymous_variant LOW 474A>G Glu158Glu
M0080054 IFCBOHHC_00005 4048 5 Skin 0.04 protein_coding synonymous_variant LOW 543G>A Glu181Glu
M0080055 IFCBOHHC_00007 5115 7 Skin 0.05 protein_coding synonymous_variant LOW 159C>T Leu53Leu
M0080056 IFCBOHHC_00012 9977 4 Skin 0.03 protein_coding synonymous_variant LOW 318T>C Phe106Phe
M0080057 IFCBOHHC_00017 16560 3 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2773G>A None
M0080058 IFCBOHHC_00002 933 16 Skin 0.12 protein_coding missense_variant MODERATE 350C>T Ala117Val
M0080059 IFCBOHHC_00002 1445 12 Skin 0.09 protein_coding missense_variant MODERATE 862G>A Glu288Lys
M0080060 IFCBOHHC_00003 1635 14 Skin 0.11 protein_coding missense_variant MODERATE 575G>A Arg192Lys
M0080061 IFCBOHHC_00003 1985 8 Skin 0.06 protein_coding synonymous_variant LOW 225A>C Pro75Pro
M0080062 IFCBOHHC_00003 2027 12 Skin 0.09 protein_coding synonymous_variant LOW 183G>T Pro61Pro
M0080063 IFCBOHHC_00003 2037 12 Skin 0.09 protein_coding missense_variant MODERATE 173A>G Lys58Arg
M0080064 IFCBOHHC_00004 3001 6 Skin 0.05 protein_coding synonymous_variant LOW 645C>T Thr215Thr
M0080065 IFCBOHHC_00004 3214 10 Skin 0.08 protein_coding synonymous_variant LOW 858G>A Gly286Gly
M0080066 IFCBOHHC_00003 1711 16 Skin 0.12 protein_coding synonymous_variant LOW 499T>C Leu167Leu
M0080067 IFCBOHHC_00003 1764 5 Skin 0.04 protein_coding missense_variant MODERATE 446A>G Asp149Gly
M0080068 IFCBOHHC_00004 3090 7 Skin 0.05 protein_coding missense_variant MODERATE 734A>G His245Arg
M0080069 IFCBOHHC_00004 3136 6 Skin 0.05 protein_coding synonymous_variant LOW 780G>A Pro260Pro
M0080070 IFCBOHHC_00004 3364 6 Skin 0.05 protein_coding synonymous_variant LOW 1008C>T Thr336Thr
M0080071 IFCBOHHC_00003 3477 7 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1268T>C None
M0080072 IFCBOHHC_00003 3478 7 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1269T>C None
M0080073 IFCBOHHC_00005 3537 8 Skin 0.06 protein_coding missense_variant MODERATE 32T>G Leu11Arg
M0080074 IFCBOHHC_00005 3538 8 Skin 0.06 protein_coding synonymous_variant LOW 33T>C Leu11Leu
M0080075 IFCBOHHC_00005 3604 6 Skin 0.05 protein_coding synonymous_variant LOW 99C>T His33His
M0080076 IFCBOHHC_00005 3653 8 Skin 0.06 protein_coding missense_variant MODERATE 148A>G Ile50Val
M0080077 IFCBOHHC_00005 3706 8 Skin 0.06 protein_coding synonymous_variant LOW 201A>C Ala67Ala
M0080078 IFCBOHHC_00005 3709 8 Skin 0.06 protein_coding synonymous_variant LOW 204T>C Thr68Thr
M0080079 IFCBOHHC_00005 3724 8 Skin 0.06 protein_coding synonymous_variant LOW 219T>C Asp73Asp
M0080080 IFCBOHHC_00005 3743 8 Skin 0.06 protein_coding missense_variant MODERATE 238G>A Ala80Thr
M0080081 IFCBOHHC_00005 3744 8 Skin 0.06 protein_coding missense_variant MODERATE 239C>T Ala80Val
M0080082 IFCBOHHC_00005 3763 8 Skin 0.06 protein_coding synonymous_variant LOW 258C>T Asn86Asn
M0080083 IFCBOHHC_00005 3764 8 Skin 0.06 protein_coding missense_variant MODERATE 259A>G Ile87Val
M0080084 IFCBOHHC_00005 3808 5 Skin 0.04 protein_coding synonymous_variant LOW 303G>A Pro101Pro
M0080085 IFCBOHHC_00005 3811 5 Skin 0.04 protein_coding synonymous_variant LOW 306A>G Glu102Glu
M0080086 IFCBOHHC_00005 3823 7 Skin 0.05 protein_coding synonymous_variant LOW 318C>T Arg106Arg
M0080087 IFCBOHHC_00005 3847 7 Skin 0.05 protein_coding synonymous_variant LOW 342C>T Gly114Gly
M0080088 IFCBOHHC_00005 3889 5 Skin 0.04 protein_coding synonymous_variant LOW 384C>T Pro128Pro
M0080089 IFCBOHHC_00005 3973 9 Skin 0.07 protein_coding synonymous_variant LOW 468A>G Gln156Gln
M0080090 IFCBOHHC_00005 4099 6 Skin 0.05 protein_coding synonymous_variant LOW 594A>G Pro198Pro
M0080091 IFCBOHHC_00005 4102 5 Skin 0.04 protein_coding synonymous_variant LOW 597G>A Lys199Lys
M0080092 IFCBOHHC_00006 4193 6 Skin 0.05 protein_coding synonymous_variant LOW 732T>C Arg244Arg
M0080093 IFCBOHHC_00006 4211 6 Skin 0.05 protein_coding synonymous_variant LOW 714G>A Gln238Gln
M0080094 IFCBOHHC_00006 4240 5 Skin 0.04 protein_coding missense_variant MODERATE 685G>A Ala229Thr
M0080095 IFCBOHHC_00006 4256 5 Skin 0.04 protein_coding synonymous_variant LOW 669T>C Leu223Leu
M0080096 IFCBOHHC_00006 4268 5 Skin 0.04 protein_coding synonymous_variant LOW 657G>A Lys219Lys
M0080097 IFCBOHHC_00006 4283 5 Skin 0.04 protein_coding synonymous_variant LOW 642A>G Arg214Arg
M0080098 IFCBOHHC_00006 4288 5 Skin 0.04 protein_coding synonymous_variant LOW 637T>C Leu213Leu
M0080099 IFCBOHHC_00006 4292 5 Skin 0.04 protein_coding synonymous_variant LOW 633C>T Ala211Ala
M0080100 IFCBOHHC_00006 4311 5 Skin 0.04 protein_coding missense_variant MODERATE 614C>G Thr205Ser
M0080101 IFCBOHHC_00006 4315 5 Skin 0.04 protein_coding missense_variant MODERATE 610G>C Val204Leu
M0080102 IFCBOHHC_00006 4322 5 Skin 0.04 protein_coding synonymous_variant LOW 603T>C Gly201Gly
M0080103 IFCBOHHC_00006 4346 5 Skin 0.04 protein_coding synonymous_variant LOW 579T>C Thr193Thr
M0080104 IFCBOHHC_00006 4352 5 Skin 0.04 protein_coding synonymous_variant LOW 573T>A Gly191Gly
M0080105 IFCBOHHC_00006 4355 5 Skin 0.04 protein_coding synonymous_variant LOW 570C>T His190His
M0080106 IFCBOHHC_00006 4366 5 Skin 0.04 protein_coding synonymous_variant LOW 559T>C Leu187Leu
M0080107 IFCBOHHC_00006 4371 5 Skin 0.04 protein_coding missense_variant MODERATE 554G>A Gly185Asp
M0080108 IFCBOHHC_00006 4394 5 Skin 0.04 protein_coding synonymous_variant LOW 531C>T Leu177Leu
M0080109 IFCBOHHC_00006 4400 5 Skin 0.04 protein_coding synonymous_variant LOW 525T>C Ala175Ala
M0080110 IFCBOHHC_00006 4424 5 Skin 0.04 protein_coding synonymous_variant LOW 501G>T Gly167Gly
M0080111 IFCBOHHC_00006 4514 5 Skin 0.04 protein_coding synonymous_variant LOW 411G>A Arg137Arg
M0080112 IFCBOHHC_00006 4565 6 Skin 0.05 protein_coding synonymous_variant LOW 360G>A Leu120Leu
M0080113 IFCBOHHC_00006 4619 6 Skin 0.05 protein_coding synonymous_variant LOW 306T>A Ser102Ser
M0080114 IFCBOHHC_00006 4622 6 Skin 0.05 protein_coding synonymous_variant LOW 303T>A Ala101Ala
M0080115 IFCBOHHC_00006 4652 6 Skin 0.05 protein_coding synonymous_variant LOW 273C>T Thr91Thr
M0080116 IFCBOHHC_00006 4685 5 Skin 0.04 protein_coding synonymous_variant LOW 240C>T Phe80Phe
M0080117 IFCBOHHC_00006 4718 6 Skin 0.05 protein_coding synonymous_variant LOW 207G>A Arg69Arg
M0080118 IFCBOHHC_00006 4721 6 Skin 0.05 protein_coding synonymous_variant LOW 204A>G Leu68Leu
M0080119 IFCBOHHC_00006 4748 5 Skin 0.04 protein_coding synonymous_variant LOW 177A>G Leu59Leu
M0080120 IFCBOHHC_00006 4763 5 Skin 0.04 protein_coding synonymous_variant LOW 162A>G Pro54Pro
M0080121 IFCBOHHC_00006 4778 5 Skin 0.04 protein_coding synonymous_variant LOW 147T>C Cys49Cys
M0080122 IFCBOHHC_00006 4866 5 Skin 0.04 protein_coding missense_variant MODERATE 59A>G Asn20Ser
M0080123 IFCBOHHC_00006 4892 5 Skin 0.04 protein_coding synonymous_variant LOW 33C>T Ala11Ala
M0080124 IFCBOHHC_00003 4926 5 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2717C>A None
M0080125 IFCBOHHC_00003 4942 5 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2733C>T None
M0080126 IFCBOHHC_00007 4974 4 Skin 0.03 protein_coding synonymous_variant LOW 18A>G Pro6Pro
M0080127 IFCBOHHC_00007 5013 3 Skin 0.02 protein_coding synonymous_variant LOW 57T>C Ile19Ile
M0080128 IFCBOHHC_00007 5128 4 Skin 0.03 protein_coding synonymous_variant LOW 172C>T Leu58Leu
M0080129 IFCBOHHC_00007 5193 5 Skin 0.04 protein_coding synonymous_variant LOW 237T>C Ser79Ser
M0080130 IFCBOHHC_00007 5203 5 Skin 0.04 protein_coding missense_variant MODERATE 247G>A Val83Ile
M0080131 IFCBOHHC_00007 5244 4 Skin 0.03 protein_coding synonymous_variant LOW 288T>C Pro96Pro
M0080132 IFCBOHHC_00007 5257 4 Skin 0.03 protein_coding missense_variant MODERATE 301A>G Ser101Gly
M0080133 IFCBOHHC_00015 11733 5 Skin 0.04 protein_coding missense_variant MODERATE 178G>T Asp60Tyr
M0080134 IFCBOHHC_00003 1677 3 Skin 0.02 protein_coding missense_variant MODERATE 533G>A Gly178Glu
M0080135 IFCBOHHC_00003 1682 3 Skin 0.02 protein_coding synonymous_variant LOW 528G>A Gly176Gly
M0080136 IFCBOHHC_00003 1874 3 Skin 0.02 protein_coding synonymous_variant LOW 336G>T Val112Val
M0080137 IFCBOHHC_00003 1933 3 Skin 0.02 protein_coding missense_variant MODERATE 277G>A Ala93Thr
M0080138 IFCBOHHC_00003 2018 5 Skin 0.04 protein_coding synonymous_variant LOW 192G>A Arg64Arg
M0080139 IFCBOHHC_00003 2021 4 Skin 0.03 protein_coding synonymous_variant LOW 189T>C Ser63Ser
M0080140 IFCBOHHC_00003 2038 4 Skin 0.03 protein_coding missense_variant MODERATE 172A>C Lys58Gln
M0080141 IFCBOHHC_00003 2060 4 Skin 0.03 protein_coding synonymous_variant LOW 150A>G Lys50Lys
M0080142 IFCBOHHC_00003 2129 3 Skin 0.02 protein_coding synonymous_variant LOW 81C>T Ser27Ser
M0080143 IFCBOHHC_00003 2139 3 Skin 0.02 protein_coding missense_variant MODERATE 71C>A Pro24His
M0080144 IFCBOHHC_00008 7056 8 Skin 0.06 protein_coding missense_variant MODERATE 252C>G Asn84Lys
M0080145 IFCBOHHC_00017 13527 4 Skin 0.03 protein_coding synonymous_variant LOW 261T>C Val87Val
M0080146 IFCBOHHC_00002 758 3 Skin 0.02 protein_coding missense_variant MODERATE 175G>A Asp59Asn
M0080147 IFCBOHHC_00022 19237 3 Skin 0.02 protein_coding missense_variant MODERATE 38C>A Thr13Lys
M0080148 IFCBOHHC_00007 5921 5 Skin 0.04 protein_coding missense_variant MODERATE 965G>A Arg322Gln
M0080149 IFCBOHHC_00006 4552 4 Skin 0.03 protein_coding missense_variant MODERATE 373G>A Asp125Asn
M0080150 IFCBOHHC_00005 3930 3 Skin 0.02 protein_coding missense_variant MODERATE 425A>T Asp142Val






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term