Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C3267
  Reference Plasmid   MET0700_bin.9__k81_117787
  Reference Plasmid Size   25990
  Reference Plasmid GC Content   0.42
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0082896 ELFMFPOB_00009 8992 6 Skin 0.43 protein_coding synonymous_variant LOW 1308A>G Gln436Gln
M0082897 ELFMFPOB_00009 8995 6 Skin 0.43 protein_coding synonymous_variant LOW 1305C>G Gly435Gly
M0082898 ELFMFPOB_00010 11115 6 Skin 0.43 protein_coding missense_variant MODERATE 1117A>G Asn373Asp
M0082899 ELFMFPOB_00006 12334 3 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4934A>G None
M0082900 ELFMFPOB_00007 12427 3 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4545G>T None
M0082901 ELFMFPOB_00006 6909 3 Skin 0.21 protein_coding synonymous_variant LOW 492A>G Glu164Glu
M0082902 ELFMFPOB_00006 6946 4 Skin 0.29 protein_coding missense_variant MODERATE 455C>T Ala152Val
M0082903 ELFMFPOB_00006 6973 3 Skin 0.21 protein_coding missense_variant MODERATE 428G>A Ser143Asn
M0082904 ELFMFPOB_00006 7049 7 Skin 0.50 protein_coding synonymous_variant LOW 352C>T Leu118Leu
M0082905 ELFMFPOB_00006 7071 7 Skin 0.50 protein_coding synonymous_variant LOW 330T>A Leu110Leu
M0082906 ELFMFPOB_00006 7088 7 Skin 0.50 protein_coding missense_variant MODERATE 313A>G Asn105Asp
M0082907 ELFMFPOB_00006 7098 6 Skin 0.43 protein_coding synonymous_variant LOW 303T>A Gly101Gly
M0082908 ELFMFPOB_00006 7161 6 Skin 0.43 protein_coding synonymous_variant LOW 240C>T Ala80Ala
M0082909 ELFMFPOB_00006 7168 5 Skin 0.36 protein_coding missense_variant MODERATE 233G>A Ser78Asn
M0082910 ELFMFPOB_00006 7314 3 Skin 0.21 protein_coding synonymous_variant LOW 87A>C Pro29Pro
M0082911 ELFMFPOB_00006 7327 6 Skin 0.43 protein_coding missense_variant MODERATE 74C>T Thr25Ile
M0082912 ELFMFPOB_00006 7328 6 Skin 0.43 protein_coding missense_variant MODERATE 73A>G Thr25Ala
M0082913 ELFMFPOB_00007 7723 3 Skin 0.21 protein_coding missense_variant MODERATE 160C>G Gln54Glu
M0082914 ELFMFPOB_00007 7724 3 Skin 0.21 protein_coding synonymous_variant LOW 159G>A Gly53Gly
M0082915 ELFMFPOB_00004 7903 3 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -3125C>T None
M0082916 ELFMFPOB_00004 7909 3 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -3131A>G None
M0082917 ELFMFPOB_00004 7922 3 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -3144C>T None
M0082918 ELFMFPOB_00004 7961 4 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -3183T>C None
M0082919 ELFMFPOB_00004 7974 4 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -3196G>T None
M0082920 ELFMFPOB_00004 7981 4 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -3203G>A None
M0082921 ELFMFPOB_00004 8022 3 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -3244A>T None
M0082922 ELFMFPOB_00004 8027 4 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -3249C>G None
M0082923 ELFMFPOB_00004 8046 5 Skin 0.36 protein_coding upstream_gene_variant MODIFIER -3268C>T None
M0082924 ELFMFPOB_00008 8279 5 Skin 0.36 protein_coding synonymous_variant LOW 147A>G Gln49Gln
M0082925 ELFMFPOB_00008 8405 5 Skin 0.36 protein_coding synonymous_variant LOW 273C>T Gly91Gly
M0082926 ELFMFPOB_00008 8538 7 Skin 0.50 protein_coding synonymous_variant LOW 406C>T Leu136Leu
M0082927 ELFMFPOB_00008 8540 7 Skin 0.50 protein_coding synonymous_variant LOW 408A>G Leu136Leu
M0082928 ELFMFPOB_00008 8543 7 Skin 0.50 protein_coding synonymous_variant LOW 411T>C Tyr137Tyr
M0082929 ELFMFPOB_00004 8609 6 Skin 0.43 protein_coding upstream_gene_variant MODIFIER -3831G>A None
M0082930 ELFMFPOB_00009 8698 3 Skin 0.21 protein_coding synonymous_variant LOW 1602G>A Gln534Gln
M0082931 ELFMFPOB_00009 8701 3 Skin 0.21 protein_coding synonymous_variant LOW 1599T>C Arg533Arg
M0082932 ELFMFPOB_00009 8704 3 Skin 0.21 protein_coding synonymous_variant LOW 1596C>T Tyr532Tyr
M0082933 ELFMFPOB_00009 8710 3 Skin 0.21 protein_coding synonymous_variant LOW 1590G>A Glu530Glu
M0082934 ELFMFPOB_00009 8719 3 Skin 0.21 protein_coding synonymous_variant LOW 1581A>T Ala527Ala
M0082935 ELFMFPOB_00009 8722 3 Skin 0.21 protein_coding synonymous_variant LOW 1578T>C Tyr526Tyr
M0082936 ELFMFPOB_00009 8731 4 Skin 0.29 protein_coding synonymous_variant LOW 1569G>A Thr523Thr
M0082937 ELFMFPOB_00009 8734 3 Skin 0.21 protein_coding synonymous_variant LOW 1566C>T Tyr522Tyr
M0082938 ELFMFPOB_00009 8737 3 Skin 0.21 protein_coding synonymous_variant LOW 1563C>T Phe521Phe
M0082939 ELFMFPOB_00009 8743 3 Skin 0.21 protein_coding synonymous_variant LOW 1557A>T Pro519Pro
M0082940 ELFMFPOB_00009 8746 3 Skin 0.21 protein_coding synonymous_variant LOW 1554G>A Gln518Gln
M0082941 ELFMFPOB_00009 8752 3 Skin 0.21 protein_coding synonymous_variant LOW 1548C>T Asn516Asn
M0082942 ELFMFPOB_00009 8818 3 Skin 0.21 protein_coding synonymous_variant LOW 1482G>A Val494Val
M0082943 ELFMFPOB_00009 8827 4 Skin 0.29 protein_coding synonymous_variant LOW 1473G>A Pro491Pro
M0082944 ELFMFPOB_00009 8842 4 Skin 0.29 protein_coding synonymous_variant LOW 1458T>C Ala486Ala
M0082945 ELFMFPOB_00009 8848 4 Skin 0.29 protein_coding synonymous_variant LOW 1452G>A Glu484Glu
M0082946 ELFMFPOB_00009 8851 4 Skin 0.29 protein_coding synonymous_variant LOW 1449T>G Leu483Leu
M0082947 ELFMFPOB_00009 8869 3 Skin 0.21 protein_coding synonymous_variant LOW 1431C>T Ile477Ile
M0082948 ELFMFPOB_00009 8877 4 Skin 0.29 protein_coding synonymous_variant LOW 1423C>T Leu475Leu
M0082949 ELFMFPOB_00009 8899 5 Skin 0.36 protein_coding synonymous_variant LOW 1401A>G Leu467Leu
M0082950 ELFMFPOB_00009 8929 5 Skin 0.36 protein_coding synonymous_variant LOW 1371G>A Lys457Lys
M0082951 ELFMFPOB_00009 8932 5 Skin 0.36 protein_coding synonymous_variant LOW 1368T>C Ala456Ala
M0082952 ELFMFPOB_00009 8935 5 Skin 0.36 protein_coding synonymous_variant LOW 1365T>G Leu455Leu
M0082953 ELFMFPOB_00009 8953 5 Skin 0.36 protein_coding synonymous_variant LOW 1347A>G Glu449Glu
M0082954 ELFMFPOB_00009 9034 4 Skin 0.29 protein_coding synonymous_variant LOW 1266T>A Ile422Ile
M0082955 ELFMFPOB_00009 9091 3 Skin 0.21 protein_coding synonymous_variant LOW 1209T>C Thr403Thr
M0082956 ELFMFPOB_00009 9202 5 Skin 0.36 protein_coding synonymous_variant LOW 1098C>T Phe366Phe
M0082957 ELFMFPOB_00009 9208 5 Skin 0.36 protein_coding synonymous_variant LOW 1092G>A Thr364Thr
M0082958 ELFMFPOB_00009 9274 6 Skin 0.43 protein_coding synonymous_variant LOW 1026G>A Leu342Leu
M0082959 ELFMFPOB_00009 9288 6 Skin 0.43 protein_coding synonymous_variant LOW 1012C>T Leu338Leu
M0082960 ELFMFPOB_00009 9307 4 Skin 0.29 protein_coding synonymous_variant LOW 993G>A Lys331Lys
M0082961 ELFMFPOB_00009 9508 5 Skin 0.36 protein_coding synonymous_variant LOW 792G>T Ser264Ser
M0082962 ELFMFPOB_00009 9622 3 Skin 0.21 protein_coding synonymous_variant LOW 678C>T Ala226Ala
M0082963 ELFMFPOB_00009 9670 3 Skin 0.21 protein_coding synonymous_variant LOW 630C>T Gly210Gly
M0082964 ELFMFPOB_00009 9676 3 Skin 0.21 protein_coding synonymous_variant LOW 624C>T Phe208Phe
M0082965 ELFMFPOB_00009 9706 6 Skin 0.43 protein_coding synonymous_variant LOW 594A>T Val198Val
M0082966 ELFMFPOB_00009 9760 4 Skin 0.29 protein_coding synonymous_variant LOW 540A>G Lys180Lys
M0082967 ELFMFPOB_00009 9796 3 Skin 0.21 protein_coding synonymous_variant LOW 504C>T Arg168Arg
M0082968 ELFMFPOB_00009 9799 3 Skin 0.21 protein_coding synonymous_variant LOW 501G>A Glu167Glu
M0082969 ELFMFPOB_00009 9841 6 Skin 0.43 protein_coding synonymous_variant LOW 459A>T Leu153Leu
M0082970 ELFMFPOB_00009 9850 4 Skin 0.29 protein_coding synonymous_variant LOW 450C>T Ala150Ala
M0082971 ELFMFPOB_00009 9979 3 Skin 0.21 protein_coding synonymous_variant LOW 321C>T Val107Val
M0082972 ELFMFPOB_00009 10021 3 Skin 0.21 protein_coding synonymous_variant LOW 279C>G Gly93Gly
M0082973 ELFMFPOB_00009 10036 3 Skin 0.21 protein_coding synonymous_variant LOW 264C>T Gly88Gly
M0082974 ELFMFPOB_00009 10045 5 Skin 0.36 protein_coding synonymous_variant LOW 255T>C Asp85Asp
M0082975 ELFMFPOB_00009 10048 5 Skin 0.36 protein_coding synonymous_variant LOW 252G>A Lys84Lys
M0082976 ELFMFPOB_00009 10051 4 Skin 0.29 protein_coding synonymous_variant LOW 249T>C Asn83Asn
M0082977 ELFMFPOB_00009 10054 5 Skin 0.36 protein_coding synonymous_variant LOW 246T>A Pro82Pro
M0082978 ELFMFPOB_00009 10060 4 Skin 0.29 protein_coding synonymous_variant LOW 240C>T Leu80Leu
M0082979 ELFMFPOB_00009 10063 4 Skin 0.29 protein_coding synonymous_variant LOW 237A>G Pro79Pro
M0082980 ELFMFPOB_00009 10066 6 Skin 0.43 protein_coding synonymous_variant LOW 234C>A Pro78Pro
M0082981 ELFMFPOB_00005 10485 4 Skin 0.29 protein_coding upstream_gene_variant MODIFIER -4488A>C None
M0082982 ELFMFPOB_00005 10487 3 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4490C>T None
M0082983 ELFMFPOB_00005 10508 3 Skin 0.21 protein_coding upstream_gene_variant MODIFIER -4511G>T None
M0082984 ELFMFPOB_00010 10510 3 Skin 0.21 protein_coding splice_region_variant&stop_retained_variant LOW 1722A>G Ter574Ter
M0082985 ELFMFPOB_00010 10555 4 Skin 0.29 protein_coding synonymous_variant LOW 1677T>C Arg559Arg
M0082986 ELFMFPOB_00010 10597 6 Skin 0.43 protein_coding synonymous_variant LOW 1635C>T Ser545Ser
M0082987 ELFMFPOB_00010 10642 5 Skin 0.36 protein_coding synonymous_variant LOW 1590A>G Pro530Pro
M0082988 ELFMFPOB_00010 10660 3 Skin 0.21 protein_coding synonymous_variant LOW 1572G>A Leu524Leu
M0082989 ELFMFPOB_00010 10672 3 Skin 0.21 protein_coding synonymous_variant LOW 1560C>T Gly520Gly
M0082990 ELFMFPOB_00010 10708 5 Skin 0.36 protein_coding synonymous_variant LOW 1524A>G Leu508Leu
M0082991 ELFMFPOB_00010 10729 3 Skin 0.21 protein_coding synonymous_variant LOW 1503C>T Thr501Thr
M0082992 ELFMFPOB_00010 10744 5 Skin 0.36 protein_coding synonymous_variant LOW 1488A>C Gly496Gly
M0082993 ELFMFPOB_00010 10861 4 Skin 0.29 protein_coding synonymous_variant LOW 1371C>G Val457Val
M0082994 ELFMFPOB_00010 10864 3 Skin 0.21 protein_coding synonymous_variant LOW 1368C>T Ile456Ile
M0082995 ELFMFPOB_00010 10870 3 Skin 0.21 protein_coding synonymous_variant LOW 1362C>T Ile454Ile
M0082996 ELFMFPOB_00010 10873 3 Skin 0.21 protein_coding synonymous_variant LOW 1359A>G Pro453Pro
M0082997 ELFMFPOB_00010 10876 3 Skin 0.21 protein_coding synonymous_variant LOW 1356G>A Leu452Leu
M0082998 ELFMFPOB_00010 11002 3 Skin 0.21 protein_coding synonymous_variant LOW 1230T>C Ala410Ala
M0082999 ELFMFPOB_00010 11011 3 Skin 0.21 protein_coding synonymous_variant LOW 1221T>C Gly407Gly
M0083000 ELFMFPOB_00010 11014 3 Skin 0.21 protein_coding synonymous_variant LOW 1218C>T His406His
M0083001 ELFMFPOB_00010 11020 3 Skin 0.21 protein_coding synonymous_variant LOW 1212G>A Leu404Leu
M0083002 ELFMFPOB_00006 6914 3 Skin 0.21 protein_coding missense_variant MODERATE 487T>C Phe163Leu
M0083003 ELFMFPOB_00006 6924 3 Skin 0.21 protein_coding synonymous_variant LOW 477A>G Gln159Gln
M0083004 ELFMFPOB_00006 6965 3 Skin 0.21 protein_coding missense_variant MODERATE 436G>C Glu146Gln
M0083005 ELFMFPOB_00006 6972 4 Skin 0.29 protein_coding synonymous_variant LOW 429T>C Ser143Ser
M0083006 ELFMFPOB_00006 6999 3 Skin 0.21 protein_coding synonymous_variant LOW 402G>A Gln134Gln
M0083007 ELFMFPOB_00006 7005 3 Skin 0.21 protein_coding synonymous_variant LOW 396G>A Gln132Gln
M0083008 ELFMFPOB_00006 7006 3 Skin 0.21 protein_coding missense_variant MODERATE 395A>G Gln132Arg
M0083009 ELFMFPOB_00006 7008 3 Skin 0.21 protein_coding synonymous_variant LOW 393G>A Ala131Ala
M0083010 ELFMFPOB_00006 7032 3 Skin 0.21 protein_coding synonymous_variant LOW 369G>A Glu123Glu
M0083011 ELFMFPOB_00006 7041 3 Skin 0.21 protein_coding synonymous_variant LOW 360G>A Val120Val
M0083012 ELFMFPOB_00006 7360 3 Skin 0.21 protein_coding missense_variant MODERATE 41C>T Ser14Leu
M0083013 ELFMFPOB_00007 7526 3 Skin 0.21 protein_coding synonymous_variant LOW 357C>T Phe119Phe
M0083014 ELFMFPOB_00007 7527 4 Skin 0.29 protein_coding missense_variant MODERATE 356T>C Phe119Ser
M0083015 ELFMFPOB_00007 7544 4 Skin 0.29 protein_coding synonymous_variant LOW 339T>C Val113Val
M0083016 ELFMFPOB_00007 7734 3 Skin 0.21 protein_coding missense_variant MODERATE 149C>T Ala50Val
M0083017 ELFMFPOB_00007 7735 3 Skin 0.21 protein_coding missense_variant MODERATE 148G>A Ala50Thr
M0083018 ELFMFPOB_00008 8180 4 Skin 0.29 protein_coding synonymous_variant LOW 48G>A Ala16Ala
M0083019 ELFMFPOB_00004 4756 4 Skin 0.29 protein_coding missense_variant MODERATE 23C>A Ala8Asp
M0083020 ELFMFPOB_00005 4966 3 Skin 0.21 protein_coding synonymous_variant LOW 1032G>A Lys344Lys
M0083021 ELFMFPOB_00005 4978 3 Skin 0.21 protein_coding synonymous_variant LOW 1020A>G Gln340Gln
M0083022 ELFMFPOB_00005 5293 3 Skin 0.21 protein_coding synonymous_variant LOW 705T>C Ile235Ile
M0083023 ELFMFPOB_00006 6084 4 Skin 0.29 protein_coding synonymous_variant LOW 1317G>A Gln439Gln
M0083024 ELFMFPOB_00004 2607 3 Skin 0.21 protein_coding synonymous_variant LOW 2172A>G Arg724Arg
M0083025 ELFMFPOB_00004 2797 3 Skin 0.21 protein_coding missense_variant MODERATE 1982G>A Gly661Glu
M0083026 ELFMFPOB_00004 2856 3 Skin 0.21 protein_coding synonymous_variant LOW 1923C>T Asp641Asp
M0083027 ELFMFPOB_00004 4131 3 Skin 0.21 protein_coding synonymous_variant LOW 648G>T Arg216Arg
M0083028 ELFMFPOB_00004 4512 3 Skin 0.21 protein_coding synonymous_variant LOW 267C>A Gly89Gly
M0083029 ELFMFPOB_00005 4843 3 Skin 0.21 protein_coding missense_variant MODERATE 1155A>T Gln385His
M0083030 ELFMFPOB_00005 5025 3 Skin 0.21 protein_coding missense_variant MODERATE 973A>C Lys325Gln
M0083031 ELFMFPOB_00005 5596 3 Skin 0.21 protein_coding synonymous_variant LOW 402G>A Leu134Leu
M0083032 ELFMFPOB_00005 5601 3 Skin 0.21 protein_coding missense_variant MODERATE 397G>A Val133Ile
M0083033 ELFMFPOB_00005 5602 3 Skin 0.21 protein_coding synonymous_variant LOW 396A>G Gln132Gln
M0083034 ELFMFPOB_00005 5605 3 Skin 0.21 protein_coding synonymous_variant LOW 393G>A Gly131Gly
M0083035 ELFMFPOB_00005 5755 3 Skin 0.21 protein_coding synonymous_variant LOW 243G>A Leu81Leu
M0083036 ELFMFPOB_00005 5764 3 Skin 0.21 protein_coding synonymous_variant LOW 234T>C Gly78Gly
M0083037 ELFMFPOB_00005 5793 3 Skin 0.21 protein_coding synonymous_variant LOW 205T>C Leu69Leu
M0083038 ELFMFPOB_00005 5794 3 Skin 0.21 protein_coding synonymous_variant LOW 204G>T Thr68Thr
M0083039 ELFMFPOB_00005 5795 3 Skin 0.21 protein_coding missense_variant MODERATE 203C>A Thr68Lys
M0083040 ELFMFPOB_00005 5797 3 Skin 0.21 protein_coding synonymous_variant LOW 201C>G Leu67Leu
M0083041 ELFMFPOB_00005 5801 3 Skin 0.21 protein_coding missense_variant MODERATE 197A>C Lys66Thr
M0083042 ELFMFPOB_00005 5802 3 Skin 0.21 protein_coding missense_variant MODERATE 196A>G Lys66Glu
M0083043 ELFMFPOB_00005 5805 3 Skin 0.21 protein_coding missense_variant MODERATE 193C>A Gln65Lys
M0083044 ELFMFPOB_00005 5807 3 Skin 0.21 protein_coding missense_variant MODERATE 191G>C Ser64Thr
M0083045 ELFMFPOB_00005 5809 3 Skin 0.21 protein_coding synonymous_variant LOW 189G>A Glu63Glu
M0083046 ELFMFPOB_00005 5817 3 Skin 0.21 protein_coding missense_variant MODERATE 181T>A Ser61Thr
M0083047 ELFMFPOB_00005 5830 3 Skin 0.21 protein_coding synonymous_variant LOW 168C>T Gly56Gly
M0083048 ELFMFPOB_00005 5842 3 Skin 0.21 protein_coding synonymous_variant LOW 156T>C Ala52Ala
M0083049 ELFMFPOB_00005 5865 3 Skin 0.21 protein_coding missense_variant MODERATE 133A>G Ser45Gly
M0083050 ELFMFPOB_00005 5914 3 Skin 0.21 protein_coding synonymous_variant LOW 84G>A Val28Val
M0083051 ELFMFPOB_00005 5945 3 Skin 0.21 protein_coding missense_variant MODERATE 53G>T Gly18Val
M0083052 ELFMFPOB_00006 6269 5 Skin 0.36 protein_coding synonymous_variant LOW 1132C>T Leu378Leu
M0083053 ELFMFPOB_00006 6287 4 Skin 0.29 protein_coding missense_variant MODERATE 1114A>C Asn372His
M0083054 ELFMFPOB_00006 6483 4 Skin 0.29 protein_coding synonymous_variant LOW 918T>C Asn306Asn
M0083055 ELFMFPOB_00006 6525 5 Skin 0.36 protein_coding synonymous_variant LOW 876T>A Leu292Leu
M0083056 ELFMFPOB_00006 6527 3 Skin 0.21 protein_coding missense_variant MODERATE 874C>T Leu292Phe
M0083057 ELFMFPOB_00006 6531 3 Skin 0.21 protein_coding synonymous_variant LOW 870A>T Pro290Pro
M0083058 ELFMFPOB_00006 6653 4 Skin 0.29 protein_coding missense_variant MODERATE 748G>C Glu250Gln
M0083059 ELFMFPOB_00006 6701 3 Skin 0.21 protein_coding missense_variant MODERATE 700A>G Thr234Ala
M0083060 ELFMFPOB_00006 6704 3 Skin 0.21 protein_coding missense_variant MODERATE 697T>A Ser233Thr
M0083061 ELFMFPOB_00006 6741 3 Skin 0.21 protein_coding synonymous_variant LOW 660C>T Asn220Asn
M0083062 ELFMFPOB_00010 11512 3 Skin 0.21 protein_coding synonymous_variant LOW 720A>C Val240Val
M0083063 ELFMFPOB_00010 11797 3 Skin 0.21 protein_coding synonymous_variant LOW 435T>A Ala145Ala
M0083064 ELFMFPOB_00007 7558 3 Skin 0.21 protein_coding synonymous_variant LOW 325T>C Leu109Leu
M0083065 ELFMFPOB_00007 7572 3 Skin 0.21 protein_coding missense_variant MODERATE 311T>C Phe104Ser
M0083066 ELFMFPOB_00007 7580 3 Skin 0.21 protein_coding synonymous_variant LOW 303A>G Leu101Leu
M0083067 ELFMFPOB_00007 7660 3 Skin 0.21 protein_coding missense_variant MODERATE 223G>A Ala75Thr






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term