Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C3294
  Reference Plasmid   MGYG000298017__MGYG000298017_64
  Reference Plasmid Size   14775
  Reference Plasmid GC Content   0.28
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0133856 HEEOCPPM_00009 5996 10 Oral 0.53 protein_coding synonymous_variant LOW 153C>T Thr51Thr
M0133857 HEEOCPPM_00010 6261 10 Oral 0.53 protein_coding synonymous_variant LOW 519A>T Thr173Thr
M0133858 HEEOCPPM_00010 6418 7 Oral 0.37 protein_coding missense_variant MODERATE 362A>G Asn121Ser
M0133859 HEEOCPPM_00010 6465 4 Oral 0.21 protein_coding synonymous_variant LOW 315T>C Ser105Ser
M0133860 HEEOCPPM_00010 6557 9 Oral 0.47 protein_coding missense_variant MODERATE 223T>A Phe75Ile
M0133861 HEEOCPPM_00004 6895 9 Oral 0.47 protein_coding upstream_gene_variant MODIFIER -4019C>T None
M0133862 HEEOCPPM_00004 7084 7 Oral 0.37 protein_coding upstream_gene_variant MODIFIER -4208G>T None
M0133863 HEEOCPPM_00004 7163 8 Oral 0.42 protein_coding upstream_gene_variant MODIFIER -4287G>A None
M0133864 HEEOCPPM_00004 7179 7 Oral 0.37 protein_coding upstream_gene_variant MODIFIER -4303T>G None
M0133865 HEEOCPPM_00004 7237 7 Oral 0.37 protein_coding upstream_gene_variant MODIFIER -4361C>G None
M0133866 HEEOCPPM_00004 7629 12 Oral 0.63 protein_coding upstream_gene_variant MODIFIER -4753G>A None
M0133867 HEEOCPPM_00004 7674 9 Oral 0.47 protein_coding upstream_gene_variant MODIFIER -4798C>T None
M0133868 HEEOCPPM_00004 7679 5 Oral 0.26 protein_coding upstream_gene_variant MODIFIER -4803A>T None
M0133869 HEEOCPPM_00004 7760 10 Oral 0.53 protein_coding upstream_gene_variant MODIFIER -4884A>G None
M0133870 HEEOCPPM_00004 7761 10 Oral 0.53 protein_coding upstream_gene_variant MODIFIER -4885T>A None
M0133871 HEEOCPPM_00004 7773 10 Oral 0.53 protein_coding upstream_gene_variant MODIFIER -4897G>T None
M0133872 HEEOCPPM_00004 7775 6 Oral 0.32 protein_coding upstream_gene_variant MODIFIER -4899T>C None
M0133873 HEEOCPPM_00004 7864 11 Oral 0.58 protein_coding upstream_gene_variant MODIFIER -4988T>G None
M0133874 HEEOCPPM_00011 8132 11 Oral 0.58 protein_coding synonymous_variant LOW 237A>G Glu79Glu
M0133875 HEEOCPPM_00011 8186 11 Oral 0.58 protein_coding synonymous_variant LOW 291T>C Leu97Leu
M0133876 HEEOCPPM_00011 8192 10 Oral 0.53 protein_coding synonymous_variant LOW 297A>G Thr99Thr
M0133877 HEEOCPPM_00011 8204 10 Oral 0.53 protein_coding synonymous_variant LOW 309C>T Phe103Phe
M0133878 HEEOCPPM_00011 8276 9 Oral 0.47 protein_coding synonymous_variant LOW 381C>T Tyr127Tyr
M0133879 HEEOCPPM_00011 8324 3 Oral 0.16 protein_coding missense_variant MODERATE 429A>G Ile143Met
M0133880 HEEOCPPM_00008 8346 9 Oral 0.47 protein_coding upstream_gene_variant MODIFIER -2644T>G None
M0133881 HEEOCPPM_00008 8382 8 Oral 0.42 protein_coding upstream_gene_variant MODIFIER -2680T>A None
M0133882 HEEOCPPM_00008 8385 10 Oral 0.53 protein_coding upstream_gene_variant MODIFIER -2683G>A None
M0133883 HEEOCPPM_00008 8388 8 Oral 0.42 protein_coding upstream_gene_variant MODIFIER -2686T>G None
M0133884 HEEOCPPM_00008 8398 8 Oral 0.42 protein_coding upstream_gene_variant MODIFIER -2696T>C None
M0133885 HEEOCPPM_00012 8423 8 Oral 0.42 protein_coding synonymous_variant LOW 15G>A Lys5Lys
M0133886 HEEOCPPM_00012 8450 7 Oral 0.37 protein_coding missense_variant MODERATE 42T>A Asp14Glu
M0133887 HEEOCPPM_00012 8501 9 Oral 0.47 protein_coding synonymous_variant LOW 93C>T Ala31Ala
M0133888 HEEOCPPM_00012 8561 11 Oral 0.58 protein_coding synonymous_variant LOW 153T>C Asp51Asp
M0133889 HEEOCPPM_00012 8598 10 Oral 0.53 protein_coding missense_variant MODERATE 190T>G Tyr64Asp
M0133890 HEEOCPPM_00012 8613 12 Oral 0.63 protein_coding missense_variant MODERATE 205G>C Glu69Gln
M0133891 HEEOCPPM_00012 8622 11 Oral 0.58 protein_coding missense_variant MODERATE 214A>G Arg72Gly
M0133892 HEEOCPPM_00012 8645 11 Oral 0.58 protein_coding synonymous_variant LOW 237A>T Ser79Ser
M0133893 HEEOCPPM_00012 8681 10 Oral 0.53 protein_coding synonymous_variant LOW 273A>T Ile91Ile
M0133894 HEEOCPPM_00012 8711 9 Oral 0.47 protein_coding synonymous_variant LOW 303T>C Val101Val
M0133895 HEEOCPPM_00012 8741 9 Oral 0.47 protein_coding synonymous_variant LOW 333A>T Gly111Gly
M0133896 HEEOCPPM_00012 8859 8 Oral 0.42 protein_coding missense_variant MODERATE 451A>G Ile151Val
M0133897 HEEOCPPM_00012 8861 8 Oral 0.42 protein_coding synonymous_variant LOW 453A>T Ile151Ile
M0133898 HEEOCPPM_00012 8990 3 Oral 0.16 protein_coding synonymous_variant LOW 582A>G Glu194Glu
M0133899 HEEOCPPM_00012 9074 11 Oral 0.58 protein_coding synonymous_variant LOW 666T>C Asp222Asp
M0133900 HEEOCPPM_00012 9128 10 Oral 0.53 protein_coding synonymous_variant LOW 720T>C Asn240Asn
M0133901 HEEOCPPM_00012 9143 12 Oral 0.63 protein_coding synonymous_variant LOW 735A>G Lys245Lys
M0133902 HEEOCPPM_00012 9158 12 Oral 0.63 protein_coding synonymous_variant LOW 750C>T Thr250Thr
M0133903 HEEOCPPM_00008 9302 8 Oral 0.42 protein_coding upstream_gene_variant MODIFIER -3600C>T None
M0133904 HEEOCPPM_00013 9592 10 Oral 0.53 protein_coding missense_variant MODERATE 156T>G Asp52Glu
M0133905 HEEOCPPM_00008 9808 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -4106G>A None
M0133906 HEEOCPPM_00014 9964 7 Oral 0.37 protein_coding missense_variant MODERATE 13A>G Ile5Val
M0133907 HEEOCPPM_00014 10017 4 Oral 0.21 protein_coding synonymous_variant LOW 66T>A Ile22Ile
M0133908 HEEOCPPM_00014 10040 3 Oral 0.16 protein_coding missense_variant MODERATE 89A>G Asn30Ser
M0133909 HEEOCPPM_00014 10050 7 Oral 0.37 protein_coding synonymous_variant LOW 99G>A Val33Val
M0133910 HEEOCPPM_00014 10118 7 Oral 0.37 protein_coding missense_variant MODERATE 167G>A Cys56Tyr
M0133911 HEEOCPPM_00014 10186 5 Oral 0.26 protein_coding missense_variant MODERATE 235T>A Phe79Ile
M0133912 HEEOCPPM_00014 10223 3 Oral 0.16 protein_coding missense_variant MODERATE 272T>C Val91Ala
M0133913 HEEOCPPM_00014 10290 8 Oral 0.42 protein_coding synonymous_variant LOW 339T>C Ser113Ser
M0133914 HEEOCPPM_00014 10339 3 Oral 0.16 protein_coding missense_variant MODERATE 388G>A Asp130Asn
M0133915 HEEOCPPM_00014 10368 7 Oral 0.37 protein_coding synonymous_variant LOW 417A>C Ala139Ala
M0133916 HEEOCPPM_00015 10593 14 Oral 0.74 protein_coding missense_variant MODERATE 96A>T Glu32Asp
M0133917 HEEOCPPM_00015 10605 14 Oral 0.74 protein_coding synonymous_variant LOW 108A>C Leu36Leu
M0133918 HEEOCPPM_00015 10632 7 Oral 0.37 protein_coding synonymous_variant LOW 135G>A Gln45Gln
M0133919 HEEOCPPM_00015 10636 4 Oral 0.21 protein_coding missense_variant MODERATE 139A>G Lys47Glu
M0133920 HEEOCPPM_00015 10677 8 Oral 0.42 protein_coding synonymous_variant LOW 180A>G Lys60Lys
M0133921 HEEOCPPM_00015 10777 9 Oral 0.47 protein_coding missense_variant MODERATE 280A>G Lys94Glu
M0133922 HEEOCPPM_00015 10783 11 Oral 0.58 protein_coding missense_variant MODERATE 286G>A Gly96Arg
M0133923 HEEOCPPM_00015 10827 13 Oral 0.68 protein_coding synonymous_variant LOW 330T>G Ser110Ser
M0133924 HEEOCPPM_00015 10922 9 Oral 0.47 protein_coding missense_variant MODERATE 425C>G Ala142Gly
M0133925 HEEOCPPM_00009 10936 14 Oral 0.74 protein_coding upstream_gene_variant MODIFIER -4788G>A None
M0133926 HEEOCPPM_00010 11546 14 Oral 0.74 protein_coding upstream_gene_variant MODIFIER -4767C>A None
M0133927 HEEOCPPM_00010 11615 11 Oral 0.58 protein_coding upstream_gene_variant MODIFIER -4836G>A None
M0133928 HEEOCPPM_00017 11742 3 Oral 0.16 protein_coding synonymous_variant LOW 108C>T Tyr36Tyr
M0133929 HEEOCPPM_00017 11781 11 Oral 0.58 protein_coding synonymous_variant LOW 147T>G Thr49Thr
M0133930 HEEOCPPM_00017 11849 7 Oral 0.37 protein_coding missense_variant MODERATE 215G>A Gly72Glu
M0133931 HEEOCPPM_00017 11850 7 Oral 0.37 protein_coding synonymous_variant LOW 216A>C Gly72Gly
M0133932 HEEOCPPM_00017 12002 12 Oral 0.63 protein_coding missense_variant MODERATE 368T>G Phe123Cys
M0133933 HEEOCPPM_00017 12004 12 Oral 0.63 protein_coding missense_variant MODERATE 370T>A Cys124Ser
M0133934 HEEOCPPM_00017 12044 6 Oral 0.32 protein_coding missense_variant MODERATE 410A>T Lys137Met
M0133935 HEEOCPPM_00018 12192 14 Oral 0.74 protein_coding missense_variant MODERATE 95C>T Ser32Phe
M0133936 HEEOCPPM_00018 12193 10 Oral 0.53 protein_coding synonymous_variant LOW 96C>T Ser32Ser
M0133937 HEEOCPPM_00018 12289 4 Oral 0.21 protein_coding synonymous_variant LOW 192T>C Thr64Thr
M0133938 HEEOCPPM_00018 12293 4 Oral 0.21 protein_coding missense_variant MODERATE 196T>C Tyr66His
M0133939 HEEOCPPM_00018 12295 4 Oral 0.21 protein_coding synonymous_variant LOW 198T>C Tyr66Tyr
M0133940 HEEOCPPM_00018 12298 4 Oral 0.21 protein_coding synonymous_variant LOW 201T>C Asn67Asn
M0133941 HEEOCPPM_00018 12303 4 Oral 0.21 protein_coding missense_variant MODERATE 206T>C Leu69Pro
M0133942 HEEOCPPM_00018 12328 14 Oral 0.74 protein_coding missense_variant MODERATE 231T>A Phe77Leu
M0133943 HEEOCPPM_00019 12370 14 Oral 0.74 protein_coding upstream_gene_variant MODIFIER -83T>C None
M0133944 HEEOCPPM_00019 12529 14 Oral 0.74 protein_coding missense_variant MODERATE 77A>C Glu26Ala
M0133945 HEEOCPPM_00019 12562 14 Oral 0.74 protein_coding missense_variant MODERATE 110T>G Met37Arg
M0133946 HEEOCPPM_00019 12572 14 Oral 0.74 protein_coding synonymous_variant LOW 120G>A Glu40Glu
M0133947 HEEOCPPM_00019 12888 3 Oral 0.16 protein_coding missense_variant MODERATE 436G>A Asp146Asn
M0133948 HEEOCPPM_00020 13062 6 Oral 0.32 protein_coding upstream_gene_variant MODIFIER -149G>A None
M0133949 HEEOCPPM_00020 13094 11 Oral 0.58 protein_coding upstream_gene_variant MODIFIER -117T>G None
M0133950 HEEOCPPM_00020 13123 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -88G>A None
M0133951 HEEOCPPM_00020 13299 10 Oral 0.53 protein_coding missense_variant MODERATE 89C>T Ala30Val
M0133952 HEEOCPPM_00020 13459 14 Oral 0.74 protein_coding synonymous_variant LOW 249A>G Arg83Arg
M0133953 HEEOCPPM_00021 13638 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -17T>A None
M0133954 HEEOCPPM_00021 13645 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -10A>T None
M0133955 HEEOCPPM_00021 13665 14 Oral 0.74 protein_coding missense_variant MODERATE 11A>T Asn4Ile
M0133956 HEEOCPPM_00021 13807 14 Oral 0.74 protein_coding synonymous_variant LOW 153A>G Leu51Leu
M0133957 HEEOCPPM_00021 14004 9 Oral 0.47 protein_coding missense_variant MODERATE 350G>A Gly117Asp
M0133958 HEEOCPPM_00021 14007 9 Oral 0.47 protein_coding missense_variant MODERATE 353A>G Glu118Gly
M0133959 HEEOCPPM_00021 14008 9 Oral 0.47 protein_coding missense_variant MODERATE 354A>T Glu118Asp
M0133960 HEEOCPPM_00021 14116 3 Oral 0.16 protein_coding missense_variant MODERATE 462A>T Lys154Asn
M0133961 HEEOCPPM_00022 14229 9 Oral 0.47 protein_coding synonymous_variant LOW 42T>C Tyr14Tyr
M0133962 HEEOCPPM_00022 14256 9 Oral 0.47 protein_coding synonymous_variant LOW 69T>C Ile23Ile
M0133963 HEEOCPPM_00022 14296 10 Oral 0.53 protein_coding missense_variant MODERATE 109G>A Glu37Lys
M0133964 HEEOCPPM_00022 14304 8 Oral 0.42 protein_coding missense_variant MODERATE 117T>A Asp39Glu
M0133965 HEEOCPPM_00023 14431 7 Oral 0.37 protein_coding missense_variant MODERATE 81A>G Ile27Met
M0133966 HEEOCPPM_00023 14449 7 Oral 0.37 protein_coding synonymous_variant LOW 99G>A Arg33Arg
M0133967 HEEOCPPM_00023 14499 8 Oral 0.42 protein_coding missense_variant MODERATE 149T>A Val50Glu
M0133968 HEEOCPPM_00023 14502 8 Oral 0.42 protein_coding missense_variant MODERATE 152G>A Arg51Lys
M0133969 HEEOCPPM_00023 14583 7 Oral 0.37 protein_coding missense_variant MODERATE 233A>G Gln78Arg
M0133970 HEEOCPPM_00023 14584 7 Oral 0.37 protein_coding missense_variant MODERATE 234G>T Gln78His
M0133971 HEEOCPPM_00023 14587 7 Oral 0.37 protein_coding synonymous_variant LOW 237C>T Asn79Asn
M0133972 HEEOCPPM_00023 14650 11 Oral 0.58 protein_coding synonymous_variant LOW 300A>G Lys100Lys
M0133973 HEEOCPPM_00023 14669 9 Oral 0.47 protein_coding missense_variant MODERATE 319A>T Ile107Leu
M0133974 HEEOCPPM_00004 7768 5 Oral 0.26 protein_coding upstream_gene_variant MODIFIER -4892C>T None
M0133975 HEEOCPPM_00011 7944 4 Oral 0.21 protein_coding missense_variant MODERATE 49G>A Val17Ile
M0133976 HEEOCPPM_00012 8558 5 Oral 0.26 protein_coding synonymous_variant LOW 150T>A Val50Val
M0133977 HEEOCPPM_00013 9496 3 Oral 0.16 protein_coding synonymous_variant LOW 60C>T Asn20Asn
M0133978 HEEOCPPM_00013 9706 3 Oral 0.16 protein_coding synonymous_variant LOW 270T>C Ile90Ile
M0133979 HEEOCPPM_00013 9716 5 Oral 0.26 protein_coding missense_variant MODERATE 280A>T Ile94Leu
M0133980 HEEOCPPM_00014 9979 3 Oral 0.16 protein_coding missense_variant MODERATE 28A>C Lys10Gln
M0133981 HEEOCPPM_00017 12051 9 Oral 0.47 protein_coding synonymous_variant LOW 417G>A Leu139Leu
M0133982 HEEOCPPM_00018 12261 3 Oral 0.16 protein_coding missense_variant MODERATE 164A>G Glu55Gly
M0133983 HEEOCPPM_00019 12386 4 Oral 0.21 protein_coding upstream_gene_variant MODIFIER -67G>A None
M0133984 HEEOCPPM_00019 12438 6 Oral 0.32 protein_coding upstream_gene_variant MODIFIER -15T>C None
M0133985 HEEOCPPM_00020 13074 6 Oral 0.32 protein_coding upstream_gene_variant MODIFIER -137A>G None
M0133986 HEEOCPPM_00020 13084 6 Oral 0.32 protein_coding upstream_gene_variant MODIFIER -127C>T None
M0133987 HEEOCPPM_00020 13222 9 Oral 0.47 protein_coding synonymous_variant LOW 12T>C Ser4Ser
M0133988 HEEOCPPM_00002 3163 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -1796A>T None
M0133989 HEEOCPPM_00002 3179 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -1812T>A None
M0133990 HEEOCPPM_00005 3296 3 Oral 0.16 protein_coding synonymous_variant LOW 30G>T Val10Val
M0133991 HEEOCPPM_00005 3656 3 Oral 0.16 protein_coding synonymous_variant LOW 390A>G Glu130Glu
M0133992 HEEOCPPM_00006 3809 3 Oral 0.16 protein_coding synonymous_variant LOW 33T>C Phe11Phe
M0133993 HEEOCPPM_00006 3822 3 Oral 0.16 protein_coding missense_variant MODERATE 46G>A Asp16Asn
M0133994 HEEOCPPM_00006 3863 3 Oral 0.16 protein_coding synonymous_variant LOW 87C>T Asn29Asn
M0133995 HEEOCPPM_00006 3869 3 Oral 0.16 protein_coding synonymous_variant LOW 93A>G Glu31Glu
M0133996 HEEOCPPM_00006 3906 3 Oral 0.16 protein_coding missense_variant MODERATE 130C>T Leu44Phe
M0133997 HEEOCPPM_00006 3965 3 Oral 0.16 protein_coding synonymous_variant LOW 189G>T Ser63Ser
M0133998 HEEOCPPM_00006 4013 3 Oral 0.16 protein_coding synonymous_variant LOW 237T>A Ala79Ala
M0133999 HEEOCPPM_00006 4130 3 Oral 0.16 protein_coding synonymous_variant LOW 354C>T Thr118Thr
M0134000 HEEOCPPM_00006 4274 3 Oral 0.16 protein_coding synonymous_variant LOW 498T>C Ile166Ile
M0134001 HEEOCPPM_00002 4327 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -2960T>G None
M0134002 HEEOCPPM_00002 4337 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -2970T>C None
M0134003 HEEOCPPM_00007 4636 3 Oral 0.16 protein_coding synonymous_variant LOW 252C>T Pro84Pro
M0134004 HEEOCPPM_00007 4637 3 Oral 0.16 protein_coding missense_variant MODERATE 253G>A Asp85Asn
M0134005 HEEOCPPM_00007 4645 3 Oral 0.16 protein_coding synonymous_variant LOW 261A>T Ala87Ala
M0134006 HEEOCPPM_00007 4678 3 Oral 0.16 protein_coding synonymous_variant LOW 294A>T Ile98Ile
M0134007 HEEOCPPM_00007 4740 3 Oral 0.16 protein_coding missense_variant MODERATE 356T>C Val119Ala
M0134008 HEEOCPPM_00007 4741 3 Oral 0.16 protein_coding synonymous_variant LOW 357T>C Val119Val
M0134009 HEEOCPPM_00007 4768 3 Oral 0.16 protein_coding synonymous_variant LOW 384A>T Gly128Gly
M0134010 HEEOCPPM_00007 4828 3 Oral 0.16 protein_coding synonymous_variant LOW 444C>T Pro148Pro
M0134011 HEEOCPPM_00002 4877 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -3510T>A None
M0134012 HEEOCPPM_00002 4926 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -3559T>C None
M0134013 HEEOCPPM_00002 4929 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -3562A>T None
M0134014 HEEOCPPM_00002 4934 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -3567C>G None
M0134015 HEEOCPPM_00002 5008 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -3641G>A None
M0134016 HEEOCPPM_00008 5236 3 Oral 0.16 protein_coding missense_variant MODERATE 467A>G Lys156Arg
M0134017 HEEOCPPM_00002 5816 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -4449A>G None
M0134018 HEEOCPPM_00009 5864 3 Oral 0.16 protein_coding synonymous_variant LOW 285G>A Glu95Glu
M0134019 HEEOCPPM_00009 5876 3 Oral 0.16 protein_coding synonymous_variant LOW 273T>C Asn91Asn
M0134020 HEEOCPPM_00009 6110 4 Oral 0.21 protein_coding synonymous_variant LOW 39G>A Glu13Glu
M0134021 HEEOCPPM_00002 6181 4 Oral 0.21 protein_coding upstream_gene_variant MODIFIER -4814A>C None
M0134022 HEEOCPPM_00010 6414 7 Oral 0.37 protein_coding synonymous_variant LOW 366A>G Leu122Leu
M0134023 HEEOCPPM_00002 6187 5 Oral 0.26 protein_coding upstream_gene_variant MODIFIER -4820T>C None
M0134024 HEEOCPPM_00004 6886 4 Oral 0.21 protein_coding upstream_gene_variant MODIFIER -4010C>T None
M0134025 HEEOCPPM_00004 7200 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -4324G>A None
M0134026 HEEOCPPM_00004 7528 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -4652C>T None
M0134027 HEEOCPPM_00012 8792 4 Oral 0.21 protein_coding synonymous_variant LOW 384T>A Thr128Thr
M0134028 HEEOCPPM_00012 8855 4 Oral 0.21 protein_coding synonymous_variant LOW 447C>T Leu149Leu
M0134029 HEEOCPPM_00016 11162 3 Oral 0.16 protein_coding missense_variant MODERATE 170C>A Ala57Glu
M0134030 HEEOCPPM_00020 13429 7 Oral 0.37 protein_coding missense_variant MODERATE 219T>A Asp73Glu
M0134031 HEEOCPPM_00020 13591 10 Oral 0.53 protein_coding synonymous_variant LOW 381G>A Glu127Glu
M0134032 HEEOCPPM_00021 14031 6 Oral 0.32 protein_coding missense_variant MODERATE 377C>G Ser126Cys
M0134033 HEEOCPPM_00022 14332 6 Oral 0.32 protein_coding missense_variant MODERATE 145A>G Asn49Asp
M0134034 HEEOCPPM_00023 14720 3 Oral 0.16 protein_coding stop_lost&splice_region_variant HIGH 370T>A Ter124Lysext*?
M0134035 HEEOCPPM_00010 6195 3 Oral 0.16 protein_coding missense_variant MODERATE 585G>T Leu195Phe
M0134036 HEEOCPPM_00010 6224 3 Oral 0.16 protein_coding missense_variant MODERATE 556G>A Glu186Lys
M0134037 HEEOCPPM_00004 7360 5 Oral 0.26 protein_coding upstream_gene_variant MODIFIER -4484G>A None
M0134038 HEEOCPPM_00004 7394 7 Oral 0.37 protein_coding upstream_gene_variant MODIFIER -4518G>A None
M0134039 HEEOCPPM_00004 7591 5 Oral 0.26 protein_coding upstream_gene_variant MODIFIER -4715T>A None
M0134040 HEEOCPPM_00008 8378 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -2676T>G None
M0134041 HEEOCPPM_00012 8888 3 Oral 0.16 protein_coding synonymous_variant LOW 480G>A Gln160Gln
M0134042 HEEOCPPM_00012 9068 4 Oral 0.21 protein_coding synonymous_variant LOW 660C>T Phe220Phe
M0134043 HEEOCPPM_00017 11787 4 Oral 0.21 protein_coding synonymous_variant LOW 153C>T Asp51Asp
M0134044 HEEOCPPM_00017 12052 3 Oral 0.16 protein_coding missense_variant MODERATE 418G>A Asp140Asn
M0134045 HEEOCPPM_00014 10157 3 Oral 0.16 protein_coding missense_variant MODERATE 206G>A Arg69Lys
M0134046 HEEOCPPM_00018 12203 3 Oral 0.16 protein_coding missense_variant MODERATE 106A>G Ile36Val
M0134047 HEEOCPPM_00019 12834 4 Oral 0.21 protein_coding synonymous_variant LOW 382C>T Leu128Leu
M0134048 HEEOCPPM_00020 13208 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -3A>T None
M0134049 HEEOCPPM_00023 14566 4 Oral 0.21 protein_coding synonymous_variant LOW 216T>C Ile72Ile
M0134050 HEEOCPPM_00004 7303 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -4427C>T None
M0134051 HEEOCPPM_00004 7504 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -4628C>T None
M0134052 HEEOCPPM_00010 6684 5 Oral 0.26 protein_coding synonymous_variant LOW 96C>T Ser32Ser
M0134053 HEEOCPPM_00018 12329 5 Oral 0.26 protein_coding missense_variant MODERATE 232C>T Leu78Phe
M0134054 HEEOCPPM_00018 12334 3 Oral 0.16 protein_coding synonymous_variant LOW 237A>G Gln79Gln
M0134055 HEEOCPPM_00018 12351 3 Oral 0.16 protein_coding missense_variant MODERATE 254G>A Arg85Lys
M0134056 HEEOCPPM_00001 422 3 Oral 0.16 protein_coding synonymous_variant LOW 255G>A Glu85Glu
M0134057 HEEOCPPM_00002 1029 3 Oral 0.16 protein_coding synonymous_variant LOW 339G>T Gly113Gly
M0134058 HEEOCPPM_00002 1032 3 Oral 0.16 protein_coding synonymous_variant LOW 336A>G Lys112Lys
M0134059 HEEOCPPM_00002 1475 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -108T>C None
M0134060 HEEOCPPM_00002 1570 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -203A>T None
M0134061 HEEOCPPM_00002 1577 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -210A>G None
M0134062 HEEOCPPM_00002 1627 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -260C>T None
M0134063 HEEOCPPM_00002 1646 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -279A>G None
M0134064 HEEOCPPM_00003 1785 3 Oral 0.16 protein_coding synonymous_variant LOW 33T>A Ile11Ile
M0134065 HEEOCPPM_00003 1855 3 Oral 0.16 protein_coding missense_variant MODERATE 103T>C Phe35Leu
M0134066 HEEOCPPM_00003 1866 3 Oral 0.16 protein_coding synonymous_variant LOW 114T>C Pro38Pro
M0134067 HEEOCPPM_00003 2043 3 Oral 0.16 protein_coding synonymous_variant LOW 291A>T Gly97Gly
M0134068 HEEOCPPM_00003 2169 3 Oral 0.16 protein_coding synonymous_variant LOW 417C>T Phe139Phe
M0134069 HEEOCPPM_00004 2481 3 Oral 0.16 protein_coding synonymous_variant LOW 396A>C Thr132Thr
M0134070 HEEOCPPM_00004 2706 3 Oral 0.16 protein_coding missense_variant MODERATE 171G>T Glu57Asp
M0134071 HEEOCPPM_00004 2714 3 Oral 0.16 protein_coding missense_variant MODERATE 163T>C Tyr55His
M0134072 HEEOCPPM_00002 2884 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -1517T>C None
M0134073 HEEOCPPM_00002 2895 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -1528C>T None
M0134074 HEEOCPPM_00011 7906 5 Oral 0.26 protein_coding missense_variant MODERATE 11T>G Ile4Ser
M0134075 HEEOCPPM_00012 9179 3 Oral 0.16 protein_coding synonymous_variant LOW 771G>A Ser257Ser
M0134076 HEEOCPPM_00004 7043 3 Oral 0.16 protein_coding upstream_gene_variant MODIFIER -4167A>G None
M0134077 HEEOCPPM_00018 12244 3 Oral 0.16 protein_coding missense_variant MODERATE 147A>T Leu49Phe






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term