Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C351
  Reference Plasmid   NZ_AP015030.1
  Reference Plasmid Size   483376
  Reference Plasmid GC Content   0.57
  Reference Plasmid Mobility Type   conjugative





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0086067 LGGJHHMI_00060 57782 33 Skin 0.38 protein_coding synonymous_variant LOW 123G>T Pro41Pro
M0086068 LGGJHHMI_00060 57868 36 Skin 0.41 protein_coding missense_variant MODERATE 37G>A Ala13Thr
M0086069 LGGJHHMI_00059 58020 34 Skin 0.39 protein_coding upstream_gene_variant MODIFIER -3652G>A None
M0086070 LGGJHHMI_00059 58022 34 Skin 0.39 protein_coding upstream_gene_variant MODIFIER -3654A>C None
M0086071 LGGJHHMI_00059 58042 35 Skin 0.40 protein_coding upstream_gene_variant MODIFIER -3674A>C None
M0086072 LGGJHHMI_00059 58045 36 Skin 0.41 protein_coding upstream_gene_variant MODIFIER -3677A>G None
M0086073 LGGJHHMI_00059 58048 36 Skin 0.41 protein_coding upstream_gene_variant MODIFIER -3680T>C None
M0086074 LGGJHHMI_00059 58086 35 Skin 0.40 protein_coding upstream_gene_variant MODIFIER -3718A>G None
M0086075 LGGJHHMI_00059 58087 35 Skin 0.40 protein_coding upstream_gene_variant MODIFIER -3719C>G None
M0086076 LGGJHHMI_00059 58090 35 Skin 0.40 protein_coding upstream_gene_variant MODIFIER -3722C>T None
M0086077 LGGJHHMI_00059 58091 35 Skin 0.40 protein_coding upstream_gene_variant MODIFIER -3723G>T None
M0086078 LGGJHHMI_00061 58148 36 Skin 0.41 protein_coding missense_variant MODERATE 880A>G Thr294Ala
M0086079 LGGJHHMI_00061 58230 33 Skin 0.38 protein_coding synonymous_variant LOW 798G>A Gln266Gln
M0086080 LGGJHHMI_00061 58236 33 Skin 0.38 protein_coding synonymous_variant LOW 792G>A Gln264Gln
M0086081 LGGJHHMI_00061 58320 34 Skin 0.39 protein_coding synonymous_variant LOW 708C>T Arg236Arg
M0086082 LGGJHHMI_00061 58374 33 Skin 0.38 protein_coding synonymous_variant LOW 654C>T Thr218Thr
M0086083 LGGJHHMI_00061 58512 34 Skin 0.39 protein_coding synonymous_variant LOW 516G>A Glu172Glu
M0086084 LGGJHHMI_00061 58515 34 Skin 0.39 protein_coding synonymous_variant LOW 513T>C Phe171Phe
M0086085 LGGJHHMI_00061 58516 34 Skin 0.39 protein_coding missense_variant MODERATE 512T>A Phe171Tyr
M0086086 LGGJHHMI_00061 58581 31 Skin 0.35 protein_coding synonymous_variant LOW 447C>T Ala149Ala
M0086087 LGGJHHMI_00061 58720 34 Skin 0.39 protein_coding missense_variant MODERATE 308G>A Ser103Asn
M0086088 LGGJHHMI_00061 58721 30 Skin 0.34 protein_coding missense_variant MODERATE 307A>C Ser103Arg
M0086089 LGGJHHMI_00061 58752 34 Skin 0.39 protein_coding synonymous_variant LOW 276A>G Gly92Gly
M0086090 LGGJHHMI_00061 58797 32 Skin 0.36 protein_coding synonymous_variant LOW 231G>A Ala77Ala
M0086091 LGGJHHMI_00061 58802 31 Skin 0.35 protein_coding missense_variant MODERATE 226G>C Val76Leu
M0086092 LGGJHHMI_00061 58824 31 Skin 0.35 protein_coding synonymous_variant LOW 204G>A Glu68Glu
M0086093 LGGJHHMI_00061 58851 33 Skin 0.38 protein_coding missense_variant MODERATE 177A>C Glu59Asp
M0086094 LGGJHHMI_00061 58881 30 Skin 0.34 protein_coding synonymous_variant LOW 147G>C Val49Val
M0086095 LGGJHHMI_00061 58902 31 Skin 0.35 protein_coding synonymous_variant LOW 126T>C Arg42Arg
M0086096 LGGJHHMI_00061 58916 30 Skin 0.34 protein_coding synonymous_variant LOW 112C>A Arg38Arg
M0086097 LGGJHHMI_00062 59105 30 Skin 0.34 protein_coding missense_variant MODERATE 764A>G Gln255Arg
M0086098 LGGJHHMI_00062 59184 30 Skin 0.34 protein_coding missense_variant MODERATE 685G>A Ala229Thr
M0086099 LGGJHHMI_00062 59191 30 Skin 0.34 protein_coding synonymous_variant LOW 678T>C Ser226Ser
M0086100 LGGJHHMI_00062 59239 31 Skin 0.35 protein_coding synonymous_variant LOW 630C>T Phe210Phe
M0086101 LGGJHHMI_00062 59301 27 Skin 0.31 protein_coding missense_variant MODERATE 568G>A Val190Ile
M0086102 LGGJHHMI_00062 59313 29 Skin 0.33 protein_coding missense_variant MODERATE 556C>T Pro186Ser
M0086103 LGGJHHMI_00062 59317 29 Skin 0.33 protein_coding synonymous_variant LOW 552A>T Ala184Ala
M0086104 LGGJHHMI_00062 59321 27 Skin 0.31 protein_coding missense_variant MODERATE 548T>C Val183Ala
M0086105 LGGJHHMI_00062 59375 26 Skin 0.30 protein_coding missense_variant MODERATE 494C>T Thr165Met
M0086106 LGGJHHMI_00062 59376 28 Skin 0.32 protein_coding missense_variant MODERATE 493A>G Thr165Ala
M0086107 LGGJHHMI_00062 59420 27 Skin 0.31 protein_coding missense_variant MODERATE 449C>T Pro150Leu
M0086108 LGGJHHMI_00062 59443 26 Skin 0.30 protein_coding synonymous_variant LOW 426G>A Pro142Pro
M0086109 LGGJHHMI_00062 59509 24 Skin 0.27 protein_coding synonymous_variant LOW 360T>C Gly120Gly
M0086110 LGGJHHMI_00062 59557 24 Skin 0.27 protein_coding synonymous_variant LOW 312T>C Arg104Arg
M0086111 LGGJHHMI_00062 59596 22 Skin 0.25 protein_coding synonymous_variant LOW 273G>A Glu91Glu
M0086112 LGGJHHMI_00062 59644 20 Skin 0.23 protein_coding synonymous_variant LOW 225G>A Gly75Gly
M0086113 LGGJHHMI_00062 59677 18 Skin 0.20 protein_coding synonymous_variant LOW 192G>T Ser64Ser
M0086114 LGGJHHMI_00060 59952 22 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -2048C>T None
M0086115 LGGJHHMI_00060 59956 21 Skin 0.24 protein_coding upstream_gene_variant MODIFIER -2052T>G None
M0086116 LGGJHHMI_00060 59958 21 Skin 0.24 protein_coding upstream_gene_variant MODIFIER -2054C>T None
M0086117 LGGJHHMI_00060 59971 21 Skin 0.24 protein_coding upstream_gene_variant MODIFIER -2067C>T None
M0086118 LGGJHHMI_00060 59972 21 Skin 0.24 protein_coding upstream_gene_variant MODIFIER -2068G>A None
M0086119 LGGJHHMI_00060 60001 22 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -2097A>G None
M0086120 LGGJHHMI_00063 60011 21 Skin 0.24 protein_coding missense_variant MODERATE 4A>G Thr2Ala
M0086121 LGGJHHMI_00063 60014 22 Skin 0.25 protein_coding missense_variant MODERATE 7G>A Ala3Thr
M0086122 LGGJHHMI_00063 60120 22 Skin 0.25 protein_coding missense_variant MODERATE 113C>T Thr38Met
M0086123 LGGJHHMI_00063 60133 22 Skin 0.25 protein_coding synonymous_variant LOW 126T>C Pro42Pro
M0086124 LGGJHHMI_00063 60136 22 Skin 0.25 protein_coding synonymous_variant LOW 129G>A Ala43Ala
M0086125 LGGJHHMI_00063 60172 22 Skin 0.25 protein_coding synonymous_variant LOW 165C>G Leu55Leu
M0086126 LGGJHHMI_00063 60219 22 Skin 0.25 protein_coding missense_variant MODERATE 212T>C Leu71Pro
M0086127 LGGJHHMI_00063 60223 22 Skin 0.25 protein_coding synonymous_variant LOW 216C>T Leu72Leu
M0086128 LGGJHHMI_00064 60411 22 Skin 0.25 protein_coding synonymous_variant LOW 1494T>C Gly498Gly
M0086129 LGGJHHMI_00064 60435 22 Skin 0.25 protein_coding synonymous_variant LOW 1470G>A Lys490Lys
M0086130 LGGJHHMI_00064 60486 22 Skin 0.25 protein_coding synonymous_variant LOW 1419T>G Val473Val
M0086131 LGGJHHMI_00064 60492 22 Skin 0.25 protein_coding synonymous_variant LOW 1413A>G Ala471Ala
M0086132 LGGJHHMI_00064 60498 22 Skin 0.25 protein_coding synonymous_variant LOW 1407T>C Ala469Ala
M0086133 LGGJHHMI_00064 60510 22 Skin 0.25 protein_coding synonymous_variant LOW 1395C>G Val465Val
M0086134 LGGJHHMI_00064 60516 22 Skin 0.25 protein_coding synonymous_variant LOW 1389T>C Phe463Phe
M0086135 LGGJHHMI_00064 60563 22 Skin 0.25 protein_coding synonymous_variant LOW 1342T>C Leu448Leu
M0086136 LGGJHHMI_00064 60588 21 Skin 0.24 protein_coding synonymous_variant LOW 1317T>C Gly439Gly
M0086137 LGGJHHMI_00064 60596 21 Skin 0.24 protein_coding synonymous_variant LOW 1309T>C Leu437Leu
M0086138 LGGJHHMI_00064 60678 20 Skin 0.23 protein_coding synonymous_variant LOW 1227G>A Ala409Ala
M0086139 LGGJHHMI_00064 60729 20 Skin 0.23 protein_coding synonymous_variant LOW 1176G>T Val392Val
M0086140 LGGJHHMI_00064 60737 20 Skin 0.23 protein_coding missense_variant MODERATE 1168G>A Val390Met
M0086141 LGGJHHMI_00064 60753 20 Skin 0.23 protein_coding synonymous_variant LOW 1152T>C Tyr384Tyr
M0086142 LGGJHHMI_00064 60776 20 Skin 0.23 protein_coding synonymous_variant LOW 1129C>T Leu377Leu
M0086143 LGGJHHMI_00064 60852 19 Skin 0.22 protein_coding synonymous_variant LOW 1053G>C Pro351Pro
M0086144 LGGJHHMI_00064 60862 19 Skin 0.22 protein_coding missense_variant MODERATE 1043G>C Gly348Ala
M0086145 LGGJHHMI_00064 60873 19 Skin 0.22 protein_coding synonymous_variant LOW 1032C>G Val344Val
M0086146 LGGJHHMI_00064 60898 19 Skin 0.22 protein_coding missense_variant MODERATE 1007A>G Asp336Gly
M0086147 LGGJHHMI_00064 60911 19 Skin 0.22 protein_coding missense_variant MODERATE 994G>A Val332Ile
M0086148 LGGJHHMI_00064 60945 17 Skin 0.19 protein_coding synonymous_variant LOW 960C>T Asp320Asp
M0086149 LGGJHHMI_00064 60983 18 Skin 0.20 protein_coding synonymous_variant LOW 922A>C Arg308Arg
M0086150 LGGJHHMI_00064 60993 18 Skin 0.20 protein_coding synonymous_variant LOW 912C>G Val304Val
M0086151 LGGJHHMI_00064 61014 18 Skin 0.20 protein_coding synonymous_variant LOW 891T>C Asn297Asn
M0086152 LGGJHHMI_00064 61019 18 Skin 0.20 protein_coding missense_variant MODERATE 886T>G Phe296Val
M0086153 LGGJHHMI_00064 61051 18 Skin 0.20 protein_coding missense_variant MODERATE 854C>G Ala285Gly
M0086154 LGGJHHMI_00064 61059 18 Skin 0.20 protein_coding synonymous_variant LOW 846G>C Ser282Ser
M0086155 LGGJHHMI_00064 61061 18 Skin 0.20 protein_coding missense_variant MODERATE 844T>A Ser282Thr
M0086156 LGGJHHMI_00064 61067 18 Skin 0.20 protein_coding synonymous_variant LOW 838C>T Leu280Leu
M0086157 LGGJHHMI_00064 61068 18 Skin 0.20 protein_coding synonymous_variant LOW 837T>C Asp279Asp
M0086158 LGGJHHMI_00064 61083 18 Skin 0.20 protein_coding synonymous_variant LOW 822T>A Ala274Ala
M0086159 LGGJHHMI_00064 61099 18 Skin 0.20 protein_coding missense_variant MODERATE 806G>A Arg269His
M0086160 LGGJHHMI_00064 61131 18 Skin 0.20 protein_coding synonymous_variant LOW 774G>A Arg258Arg
M0086161 LGGJHHMI_00064 61132 18 Skin 0.20 protein_coding missense_variant MODERATE 773G>A Arg258Gln
M0086162 LGGJHHMI_00064 61146 18 Skin 0.20 protein_coding synonymous_variant LOW 759C>G Gly253Gly
M0086163 LGGJHHMI_00064 61176 18 Skin 0.20 protein_coding synonymous_variant LOW 729G>A Ala243Ala
M0086164 LGGJHHMI_00064 61223 17 Skin 0.19 protein_coding missense_variant MODERATE 682G>T Ala228Ser
M0086165 LGGJHHMI_00064 61224 17 Skin 0.19 protein_coding synonymous_variant LOW 681C>A Arg227Arg
M0086166 LGGJHHMI_00064 61232 17 Skin 0.19 protein_coding missense_variant MODERATE 673A>G Thr225Ala
M0086167 LGGJHHMI_00064 61260 17 Skin 0.19 protein_coding synonymous_variant LOW 645T>C Tyr215Tyr
M0086168 LGGJHHMI_00064 61470 15 Skin 0.17 protein_coding synonymous_variant LOW 435C>T Gly145Gly
M0086169 LGGJHHMI_00064 61493 15 Skin 0.17 protein_coding missense_variant MODERATE 412G>T Ala138Ser
M0086170 LGGJHHMI_00064 61535 16 Skin 0.18 protein_coding missense_variant MODERATE 370G>A Asp124Asn
M0086171 LGGJHHMI_00064 61538 16 Skin 0.18 protein_coding missense_variant MODERATE 367A>G Asn123Asp
M0086172 LGGJHHMI_00064 61544 16 Skin 0.18 protein_coding missense_variant MODERATE 361G>A Ala121Thr
M0086173 LGGJHHMI_00064 61545 16 Skin 0.18 protein_coding synonymous_variant LOW 360G>C Thr120Thr
M0086174 LGGJHHMI_00064 61559 16 Skin 0.18 protein_coding missense_variant MODERATE 346T>G Ser116Ala
M0086175 LGGJHHMI_00064 61662 16 Skin 0.18 protein_coding synonymous_variant LOW 243G>C Ala81Ala
M0086176 LGGJHHMI_00064 61737 15 Skin 0.17 protein_coding synonymous_variant LOW 168G>A Glu56Glu
M0086177 LGGJHHMI_00064 61746 15 Skin 0.17 protein_coding synonymous_variant LOW 159T>C Gly53Gly
M0086178 LGGJHHMI_00064 61797 16 Skin 0.18 protein_coding synonymous_variant LOW 108G>C Leu36Leu
M0086179 LGGJHHMI_00064 61812 16 Skin 0.18 protein_coding synonymous_variant LOW 93C>T Ser31Ser
M0086180 LGGJHHMI_00064 61828 16 Skin 0.18 protein_coding missense_variant MODERATE 77G>A Ser26Asn
M0086181 LGGJHHMI_00064 61880 16 Skin 0.18 protein_coding synonymous_variant LOW 25T>C Leu9Leu
M0086182 LGGJHHMI_00060 61908 16 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4004A>G None
M0086183 LGGJHHMI_00065 61934 16 Skin 0.18 protein_coding synonymous_variant LOW 340C>T Leu114Leu
M0086184 LGGJHHMI_00065 61938 16 Skin 0.18 protein_coding synonymous_variant LOW 336G>A Gln112Gln
M0086185 LGGJHHMI_00065 61941 16 Skin 0.18 protein_coding synonymous_variant LOW 333C>T Ser111Ser
M0086186 LGGJHHMI_00065 61962 16 Skin 0.18 protein_coding synonymous_variant LOW 312C>T Ala104Ala
M0086187 LGGJHHMI_00065 61968 16 Skin 0.18 protein_coding synonymous_variant LOW 306C>G Val102Val
M0086188 LGGJHHMI_00065 62016 16 Skin 0.18 protein_coding synonymous_variant LOW 258G>A Pro86Pro
M0086189 LGGJHHMI_00065 62030 16 Skin 0.18 protein_coding synonymous_variant LOW 244T>C Leu82Leu
M0086190 LGGJHHMI_00065 62038 16 Skin 0.18 protein_coding missense_variant MODERATE 236G>A Arg79Gln
M0086191 LGGJHHMI_00065 62040 16 Skin 0.18 protein_coding synonymous_variant LOW 234T>C Arg78Arg
M0086192 LGGJHHMI_00065 62069 17 Skin 0.19 protein_coding missense_variant MODERATE 205G>A Ala69Thr
M0086193 LGGJHHMI_00065 62070 17 Skin 0.19 protein_coding synonymous_variant LOW 204A>G Gly68Gly
M0086194 LGGJHHMI_00065 62085 17 Skin 0.19 protein_coding synonymous_variant LOW 189T>G Arg63Arg
M0086195 LGGJHHMI_00065 62187 17 Skin 0.19 protein_coding synonymous_variant LOW 87T>C Ala29Ala
M0086196 LGGJHHMI_00065 62189 17 Skin 0.19 protein_coding missense_variant MODERATE 85G>A Ala29Thr
M0086197 LGGJHHMI_00065 62232 17 Skin 0.19 protein_coding synonymous_variant LOW 42C>T Asn14Asn
M0086198 LGGJHHMI_00066 62300 17 Skin 0.19 protein_coding synonymous_variant LOW 1377A>G Glu459Glu
M0086199 LGGJHHMI_00066 62318 17 Skin 0.19 protein_coding synonymous_variant LOW 1359G>A Thr453Thr
M0086200 LGGJHHMI_00066 62338 16 Skin 0.18 protein_coding missense_variant MODERATE 1339G>A Val447Ile
M0086201 LGGJHHMI_00066 62360 16 Skin 0.18 protein_coding synonymous_variant LOW 1317C>T Thr439Thr
M0086202 LGGJHHMI_00066 62372 17 Skin 0.19 protein_coding missense_variant MODERATE 1305C>G His435Gln
M0086203 LGGJHHMI_00066 62411 17 Skin 0.19 protein_coding synonymous_variant LOW 1266G>C Arg422Arg
M0086204 LGGJHHMI_00066 62417 17 Skin 0.19 protein_coding synonymous_variant LOW 1260A>G Glu420Glu
M0086205 LGGJHHMI_00066 62426 17 Skin 0.19 protein_coding synonymous_variant LOW 1251C>T Thr417Thr
M0086206 LGGJHHMI_00066 62591 16 Skin 0.18 protein_coding synonymous_variant LOW 1086C>G Leu362Leu
M0086207 LGGJHHMI_00066 62612 17 Skin 0.19 protein_coding synonymous_variant LOW 1065G>A Gln355Gln
M0086208 LGGJHHMI_00066 62695 18 Skin 0.20 protein_coding synonymous_variant LOW 982T>C Leu328Leu
M0086209 LGGJHHMI_00066 62774 20 Skin 0.23 protein_coding synonymous_variant LOW 903G>C Leu301Leu
M0086210 LGGJHHMI_00066 62861 18 Skin 0.20 protein_coding synonymous_variant LOW 816G>C Ala272Ala
M0086211 LGGJHHMI_00066 62897 19 Skin 0.22 protein_coding synonymous_variant LOW 780A>G Leu260Leu
M0086212 LGGJHHMI_00066 62984 21 Skin 0.24 protein_coding synonymous_variant LOW 693C>T Asp231Asp
M0086213 LGGJHHMI_00066 63005 21 Skin 0.24 protein_coding synonymous_variant LOW 672C>T Ser224Ser
M0086214 LGGJHHMI_00066 63011 21 Skin 0.24 protein_coding synonymous_variant LOW 666T>C Gly222Gly
M0086215 LGGJHHMI_00066 63013 21 Skin 0.24 protein_coding missense_variant MODERATE 664G>A Gly222Ser
M0086216 LGGJHHMI_00066 63044 21 Skin 0.24 protein_coding synonymous_variant LOW 633A>C Pro211Pro
M0086217 LGGJHHMI_00060 56993 27 Skin 0.31 protein_coding synonymous_variant LOW 912A>C Ala304Ala
M0086218 LGGJHHMI_00060 56999 28 Skin 0.32 protein_coding synonymous_variant LOW 906A>G Leu302Leu
M0086219 LGGJHHMI_00060 57034 29 Skin 0.33 protein_coding synonymous_variant LOW 871C>T Leu291Leu
M0086220 LGGJHHMI_00060 57041 29 Skin 0.33 protein_coding synonymous_variant LOW 864A>G Gln288Gln
M0086221 LGGJHHMI_00060 57053 29 Skin 0.33 protein_coding synonymous_variant LOW 852C>T Gly284Gly
M0086222 LGGJHHMI_00060 57065 28 Skin 0.32 protein_coding synonymous_variant LOW 840C>T Gly280Gly
M0086223 LGGJHHMI_00060 57080 28 Skin 0.32 protein_coding synonymous_variant LOW 825G>A Lys275Lys
M0086224 LGGJHHMI_00060 57089 29 Skin 0.33 protein_coding synonymous_variant LOW 816G>A Glu272Glu
M0086225 LGGJHHMI_00060 57146 29 Skin 0.33 protein_coding synonymous_variant LOW 759A>G Ala253Ala
M0086226 LGGJHHMI_00060 57161 29 Skin 0.33 protein_coding synonymous_variant LOW 744T>C Ser248Ser
M0086227 LGGJHHMI_00060 57218 29 Skin 0.33 protein_coding synonymous_variant LOW 687A>G Glu229Glu
M0086228 LGGJHHMI_00060 57313 30 Skin 0.34 protein_coding missense_variant MODERATE 592G>T Asp198Tyr
M0086229 LGGJHHMI_00060 57431 32 Skin 0.36 protein_coding synonymous_variant LOW 474C>T Ile158Ile
M0086230 LGGJHHMI_00060 57433 33 Skin 0.38 protein_coding missense_variant MODERATE 472A>G Ile158Val
M0086231 LGGJHHMI_00060 57449 33 Skin 0.38 protein_coding synonymous_variant LOW 456A>G Glu152Glu
M0086232 LGGJHHMI_00060 57467 33 Skin 0.38 protein_coding synonymous_variant LOW 438C>G Ala146Ala
M0086233 LGGJHHMI_00060 57533 33 Skin 0.38 protein_coding synonymous_variant LOW 372C>A Ala124Ala
M0086234 LGGJHHMI_00062 59722 15 Skin 0.17 protein_coding synonymous_variant LOW 147T>C Arg49Arg
M0086235 LGGJHHMI_00062 59727 15 Skin 0.17 protein_coding missense_variant MODERATE 142T>C Ser48Pro
M0086236 LGGJHHMI_00062 59743 14 Skin 0.16 protein_coding synonymous_variant LOW 126A>G Arg42Arg
M0086237 LGGJHHMI_00062 59763 14 Skin 0.16 protein_coding synonymous_variant LOW 106C>A Arg36Arg
M0086238 LGGJHHMI_00062 59772 15 Skin 0.17 protein_coding missense_variant MODERATE 97C>G Arg33Gly
M0086239 LGGJHHMI_00062 59780 14 Skin 0.16 protein_coding missense_variant MODERATE 89A>G Asn30Ser
M0086240 LGGJHHMI_00062 59791 14 Skin 0.16 protein_coding synonymous_variant LOW 78T>C Cys26Cys
M0086241 LGGJHHMI_00062 59806 14 Skin 0.16 protein_coding synonymous_variant LOW 63C>T Val21Val
M0086242 LGGJHHMI_00062 59807 14 Skin 0.16 protein_coding missense_variant MODERATE 62T>C Val21Ala
M0086243 LGGJHHMI_00062 59818 14 Skin 0.16 protein_coding missense_variant MODERATE 51G>A Met17Ile
M0086244 LGGJHHMI_00062 59821 14 Skin 0.16 protein_coding synonymous_variant LOW 48A>G Ala16Ala
M0086245 LGGJHHMI_00062 59833 14 Skin 0.16 protein_coding missense_variant MODERATE 36G>A Met12Ile
M0086246 LGGJHHMI_00062 59835 14 Skin 0.16 protein_coding missense_variant MODERATE 34A>C Met12Leu
M0086247 LGGJHHMI_00062 59837 14 Skin 0.16 protein_coding missense_variant MODERATE 32C>T Ser11Phe
M0086248 LGGJHHMI_00064 60648 19 Skin 0.22 protein_coding synonymous_variant LOW 1257G>T Ala419Ala
M0086249 LGGJHHMI_00069 65288 4 Skin 0.05 protein_coding synonymous_variant LOW 438C>T Asp146Asp
M0086250 LGGJHHMI_00069 65329 4 Skin 0.05 protein_coding synonymous_variant LOW 397C>T Leu133Leu
M0086251 LGGJHHMI_00069 65351 4 Skin 0.05 protein_coding synonymous_variant LOW 375C>T Ala125Ala
M0086252 LGGJHHMI_00069 65360 4 Skin 0.05 protein_coding synonymous_variant LOW 366A>C Pro122Pro
M0086253 LGGJHHMI_00069 65407 4 Skin 0.05 protein_coding missense_variant MODERATE 319G>T Ala107Ser
M0086254 LGGJHHMI_00069 65476 5 Skin 0.06 protein_coding missense_variant MODERATE 250C>A Gln84Lys
M0086255 LGGJHHMI_00069 65551 5 Skin 0.06 protein_coding missense_variant MODERATE 175A>G Thr59Ala
M0086256 LGGJHHMI_00069 65603 5 Skin 0.06 protein_coding synonymous_variant LOW 123A>G Pro41Pro
M0086257 LGGJHHMI_00069 65635 5 Skin 0.06 protein_coding synonymous_variant LOW 91T>C Leu31Leu
M0086258 LGGJHHMI_00069 65636 5 Skin 0.06 protein_coding synonymous_variant LOW 90T>C Ala30Ala
M0086259 LGGJHHMI_00069 65638 5 Skin 0.06 protein_coding missense_variant MODERATE 88G>A Ala30Thr
M0086260 LGGJHHMI_00069 65717 5 Skin 0.06 protein_coding synonymous_variant LOW 9T>C Leu3Leu
M0086261 LGGJHHMI_00064 65739 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3835A>C None
M0086262 LGGJHHMI_00064 65804 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3900C>T None
M0086263 LGGJHHMI_00064 65831 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3927G>C None
M0086264 LGGJHHMI_00064 65837 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3933T>C None
M0086265 LGGJHHMI_00064 65875 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3971A>G None
M0086266 LGGJHHMI_00064 65891 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3987T>C None
M0086267 LGGJHHMI_00070 65942 4 Skin 0.05 protein_coding synonymous_variant LOW 723T>C Val241Val
M0086268 LGGJHHMI_00070 65962 5 Skin 0.06 protein_coding missense_variant MODERATE 703T>C Ser235Pro
M0086269 LGGJHHMI_00070 66017 5 Skin 0.06 protein_coding synonymous_variant LOW 648T>G Ser216Ser
M0086270 LGGJHHMI_00070 66059 5 Skin 0.06 protein_coding synonymous_variant LOW 606G>C Thr202Thr
M0086271 LGGJHHMI_00070 66079 5 Skin 0.06 protein_coding missense_variant MODERATE 586G>C Asp196His
M0086272 LGGJHHMI_00070 66091 5 Skin 0.06 protein_coding synonymous_variant LOW 574C>T Leu192Leu
M0086273 LGGJHHMI_00070 66122 5 Skin 0.06 protein_coding synonymous_variant LOW 543G>A Ala181Ala
M0086274 LGGJHHMI_00070 66134 5 Skin 0.06 protein_coding missense_variant MODERATE 531C>G His177Gln
M0086275 LGGJHHMI_00070 66139 5 Skin 0.06 protein_coding missense_variant MODERATE 526T>G Ser176Ala
M0086276 LGGJHHMI_00070 66148 5 Skin 0.06 protein_coding missense_variant MODERATE 517A>G Ile173Val
M0086277 LGGJHHMI_00070 66152 5 Skin 0.06 protein_coding synonymous_variant LOW 513C>T Asp171Asp
M0086278 LGGJHHMI_00070 66177 5 Skin 0.06 protein_coding missense_variant MODERATE 488C>G Ala163Gly
M0086279 LGGJHHMI_00070 66178 5 Skin 0.06 protein_coding missense_variant MODERATE 487G>C Ala163Pro
M0086280 LGGJHHMI_00070 66184 5 Skin 0.06 protein_coding missense_variant MODERATE 481G>A Val161Met
M0086281 LGGJHHMI_00070 66188 5 Skin 0.06 protein_coding synonymous_variant LOW 477T>A Pro159Pro
M0086282 LGGJHHMI_00070 66239 5 Skin 0.06 protein_coding synonymous_variant LOW 426C>T Arg142Arg
M0086283 LGGJHHMI_00070 66247 5 Skin 0.06 protein_coding missense_variant MODERATE 418C>A His140Asn
M0086284 LGGJHHMI_00070 66250 5 Skin 0.06 protein_coding missense_variant MODERATE 415G>T Ala139Ser
M0086285 LGGJHHMI_00070 66260 5 Skin 0.06 protein_coding synonymous_variant LOW 405C>G Ala135Ala
M0086286 LGGJHHMI_00070 66266 5 Skin 0.06 protein_coding synonymous_variant LOW 399G>C Ala133Ala
M0086287 LGGJHHMI_00070 66293 5 Skin 0.06 protein_coding synonymous_variant LOW 372C>T Ile124Ile
M0086288 LGGJHHMI_00070 66294 5 Skin 0.06 protein_coding missense_variant MODERATE 371T>C Ile124Thr
M0086289 LGGJHHMI_00070 66324 6 Skin 0.07 protein_coding missense_variant MODERATE 341G>A Gly114Glu
M0086290 LGGJHHMI_00070 66372 6 Skin 0.07 protein_coding missense_variant MODERATE 293G>A Arg98Gln
M0086291 LGGJHHMI_00070 66378 6 Skin 0.07 protein_coding missense_variant MODERATE 287G>A Ser96Asn
M0086292 LGGJHHMI_00070 66388 6 Skin 0.07 protein_coding missense_variant MODERATE 277C>G Pro93Ala
M0086293 LGGJHHMI_00070 66398 6 Skin 0.07 protein_coding synonymous_variant LOW 267A>C Ile89Ile
M0086294 LGGJHHMI_00070 66415 6 Skin 0.07 protein_coding missense_variant MODERATE 250A>G Thr84Ala
M0086295 LGGJHHMI_00070 66422 6 Skin 0.07 protein_coding synonymous_variant LOW 243C>T Tyr81Tyr
M0086296 LGGJHHMI_00070 66431 6 Skin 0.07 protein_coding synonymous_variant LOW 234T>C Cys78Cys
M0086297 LGGJHHMI_00070 66458 6 Skin 0.07 protein_coding synonymous_variant LOW 207T>G Gly69Gly
M0086298 LGGJHHMI_00070 66476 6 Skin 0.07 protein_coding synonymous_variant LOW 189C>G Ala63Ala
M0086299 LGGJHHMI_00070 66509 6 Skin 0.07 protein_coding synonymous_variant LOW 156T>C Ala52Ala
M0086300 LGGJHHMI_00070 66520 6 Skin 0.07 protein_coding missense_variant MODERATE 145T>C Ser49Pro
M0086301 LGGJHHMI_00070 66550 6 Skin 0.07 protein_coding missense_variant MODERATE 115G>A Val39Met
M0086302 LGGJHHMI_00070 66553 6 Skin 0.07 protein_coding missense_variant MODERATE 112C>T Pro38Ser
M0086303 LGGJHHMI_00070 66576 6 Skin 0.07 protein_coding missense_variant MODERATE 89A>G His30Arg
M0086304 LGGJHHMI_00070 66596 6 Skin 0.07 protein_coding synonymous_variant LOW 69G>T Val23Val
M0086305 LGGJHHMI_00064 66670 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4766A>G None
M0086306 LGGJHHMI_00064 66677 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4773A>C None
M0086307 LGGJHHMI_00071 66698 6 Skin 0.07 protein_coding missense_variant MODERATE 2860A>G Thr954Ala
M0086308 LGGJHHMI_00071 66702 6 Skin 0.07 protein_coding synonymous_variant LOW 2856T>C Pro952Pro
M0086309 LGGJHHMI_00071 66750 6 Skin 0.07 protein_coding synonymous_variant LOW 2808G>C Ala936Ala
M0086310 LGGJHHMI_00071 66756 6 Skin 0.07 protein_coding synonymous_variant LOW 2802G>C Leu934Leu
M0086311 LGGJHHMI_00071 66759 6 Skin 0.07 protein_coding synonymous_variant LOW 2799G>A Glu933Glu
M0086312 LGGJHHMI_00071 66810 6 Skin 0.07 protein_coding synonymous_variant LOW 2748G>C Pro916Pro
M0086313 LGGJHHMI_00071 66867 6 Skin 0.07 protein_coding synonymous_variant LOW 2691A>G Glu897Glu
M0086314 LGGJHHMI_00071 66873 6 Skin 0.07 protein_coding missense_variant MODERATE 2685C>G Ser895Arg
M0086315 LGGJHHMI_00071 66874 6 Skin 0.07 protein_coding missense_variant MODERATE 2684G>C Ser895Thr
M0086316 LGGJHHMI_00071 66875 6 Skin 0.07 protein_coding missense_variant MODERATE 2683A>T Ser895Cys
M0086317 LGGJHHMI_00071 66882 6 Skin 0.07 protein_coding synonymous_variant LOW 2676C>G Leu892Leu
M0086318 LGGJHHMI_00071 66912 6 Skin 0.07 protein_coding synonymous_variant LOW 2646A>G Glu882Glu
M0086319 LGGJHHMI_00071 66948 6 Skin 0.07 protein_coding synonymous_variant LOW 2610G>T Ala870Ala
M0086320 LGGJHHMI_00071 66951 6 Skin 0.07 protein_coding synonymous_variant LOW 2607T>C Asn869Asn
M0086321 LGGJHHMI_00071 66966 6 Skin 0.07 protein_coding synonymous_variant LOW 2592G>C Arg864Arg
M0086322 LGGJHHMI_00071 66969 6 Skin 0.07 protein_coding synonymous_variant LOW 2589C>G Ala863Ala
M0086323 LGGJHHMI_00071 66999 6 Skin 0.07 protein_coding synonymous_variant LOW 2559G>C Ser853Ser
M0086324 LGGJHHMI_00071 67055 7 Skin 0.08 protein_coding synonymous_variant LOW 2503T>C Leu835Leu
M0086325 LGGJHHMI_00071 67164 7 Skin 0.08 protein_coding synonymous_variant LOW 2394T>C Gly798Gly
M0086326 LGGJHHMI_00071 67254 6 Skin 0.07 protein_coding synonymous_variant LOW 2304T>C Ile768Ile
M0086327 LGGJHHMI_00071 67257 6 Skin 0.07 protein_coding synonymous_variant LOW 2301C>G Ser767Ser
M0086328 LGGJHHMI_00071 67263 6 Skin 0.07 protein_coding synonymous_variant LOW 2295G>A Gln765Gln
M0086329 LGGJHHMI_00071 67266 6 Skin 0.07 protein_coding synonymous_variant LOW 2292G>C Ala764Ala
M0086330 LGGJHHMI_00071 67284 6 Skin 0.07 protein_coding synonymous_variant LOW 2274C>G Ala758Ala
M0086331 LGGJHHMI_00071 67317 6 Skin 0.07 protein_coding synonymous_variant LOW 2241C>G Val747Val
M0086332 LGGJHHMI_00071 67318 6 Skin 0.07 protein_coding missense_variant MODERATE 2240T>C Val747Ala
M0086333 LGGJHHMI_00071 67320 6 Skin 0.07 protein_coding synonymous_variant LOW 2238A>G Glu746Glu
M0086334 LGGJHHMI_00071 67323 6 Skin 0.07 protein_coding synonymous_variant LOW 2235G>C Pro745Pro
M0086335 LGGJHHMI_00071 67340 6 Skin 0.07 protein_coding missense_variant MODERATE 2218C>T Pro740Ser
M0086336 LGGJHHMI_00071 67359 6 Skin 0.07 protein_coding synonymous_variant LOW 2199T>C Asp733Asp
M0086337 LGGJHHMI_00071 67380 6 Skin 0.07 protein_coding synonymous_variant LOW 2178C>T Asp726Asp
M0086338 LGGJHHMI_00071 67407 7 Skin 0.08 protein_coding synonymous_variant LOW 2151C>G Arg717Arg
M0086339 LGGJHHMI_00071 67425 7 Skin 0.08 protein_coding synonymous_variant LOW 2133G>T Pro711Pro
M0086340 LGGJHHMI_00071 67437 7 Skin 0.08 protein_coding synonymous_variant LOW 2121T>C Asp707Asp
M0086341 LGGJHHMI_00071 67442 7 Skin 0.08 protein_coding missense_variant MODERATE 2116G>C Gly706Arg
M0086342 LGGJHHMI_00071 67492 8 Skin 0.09 protein_coding missense_variant MODERATE 2066A>G Glu689Gly
M0086343 LGGJHHMI_00071 67493 8 Skin 0.09 protein_coding missense_variant MODERATE 2065G>A Glu689Lys
M0086344 LGGJHHMI_00071 67494 8 Skin 0.09 protein_coding synonymous_variant LOW 2064C>T Asp688Asp
M0086345 LGGJHHMI_00071 67510 8 Skin 0.09 protein_coding missense_variant MODERATE 2048G>A Arg683Gln
M0086346 LGGJHHMI_00071 67557 7 Skin 0.08 protein_coding synonymous_variant LOW 2001C>G Thr667Thr
M0086347 LGGJHHMI_00071 67602 8 Skin 0.09 protein_coding synonymous_variant LOW 1956G>A Arg652Arg
M0086348 LGGJHHMI_00071 67632 7 Skin 0.08 protein_coding synonymous_variant LOW 1926C>T Asp642Asp
M0086349 LGGJHHMI_00071 67644 8 Skin 0.09 protein_coding synonymous_variant LOW 1914C>T Asp638Asp
M0086350 LGGJHHMI_00071 67673 8 Skin 0.09 protein_coding missense_variant MODERATE 1885C>A Pro629Thr
M0086351 LGGJHHMI_00071 67677 8 Skin 0.09 protein_coding synonymous_variant LOW 1881T>C Asp627Asp
M0086352 LGGJHHMI_00071 67776 8 Skin 0.09 protein_coding synonymous_variant LOW 1782C>G Pro594Pro
M0086353 LGGJHHMI_00071 67851 7 Skin 0.08 protein_coding synonymous_variant LOW 1707G>T Ala569Ala
M0086354 LGGJHHMI_00071 67878 7 Skin 0.08 protein_coding synonymous_variant LOW 1680T>C Tyr560Tyr
M0086355 LGGJHHMI_00071 67896 7 Skin 0.08 protein_coding synonymous_variant LOW 1662T>C Asn554Asn
M0086356 LGGJHHMI_00071 67971 7 Skin 0.08 protein_coding synonymous_variant LOW 1587C>G Arg529Arg
M0086357 LGGJHHMI_00071 68138 7 Skin 0.08 protein_coding missense_variant MODERATE 1420C>T Pro474Ser
M0086358 LGGJHHMI_00071 68193 7 Skin 0.08 protein_coding synonymous_variant LOW 1365A>G Glu455Glu
M0086359 LGGJHHMI_00071 68196 7 Skin 0.08 protein_coding synonymous_variant LOW 1362G>A Glu454Glu
M0086360 LGGJHHMI_00071 68202 7 Skin 0.08 protein_coding synonymous_variant LOW 1356G>A Val452Val
M0086361 LGGJHHMI_00071 68208 7 Skin 0.08 protein_coding synonymous_variant LOW 1350G>A Gln450Gln
M0086362 LGGJHHMI_00071 68217 7 Skin 0.08 protein_coding synonymous_variant LOW 1341G>C Ala447Ala
M0086363 LGGJHHMI_00071 68241 7 Skin 0.08 protein_coding synonymous_variant LOW 1317A>G Gln439Gln
M0086364 LGGJHHMI_00071 68256 7 Skin 0.08 protein_coding synonymous_variant LOW 1302C>T Asp434Asp
M0086365 LGGJHHMI_00071 68298 8 Skin 0.09 protein_coding synonymous_variant LOW 1260A>G Ala420Ala
M0086366 LGGJHHMI_00071 68316 7 Skin 0.08 protein_coding synonymous_variant LOW 1242C>T His414His
M0086367 LGGJHHMI_00071 68356 8 Skin 0.09 protein_coding missense_variant MODERATE 1202C>A Ala401Glu
M0086368 LGGJHHMI_00071 68357 8 Skin 0.09 protein_coding missense_variant MODERATE 1201G>C Ala401Pro
M0086369 LGGJHHMI_00071 68358 8 Skin 0.09 protein_coding synonymous_variant LOW 1200T>G Arg400Arg
M0086370 LGGJHHMI_00071 68361 8 Skin 0.09 protein_coding synonymous_variant LOW 1197G>C Thr399Thr
M0086371 LGGJHHMI_00071 68379 8 Skin 0.09 protein_coding synonymous_variant LOW 1179C>A Thr393Thr
M0086372 LGGJHHMI_00071 68391 8 Skin 0.09 protein_coding synonymous_variant LOW 1167C>T Ala389Ala
M0086373 LGGJHHMI_00071 68412 9 Skin 0.10 protein_coding synonymous_variant LOW 1146G>C Leu382Leu
M0086374 LGGJHHMI_00071 68505 9 Skin 0.10 protein_coding synonymous_variant LOW 1053C>T Asp351Asp
M0086375 LGGJHHMI_00071 68514 9 Skin 0.10 protein_coding synonymous_variant LOW 1044A>G Lys348Lys
M0086376 LGGJHHMI_00071 68532 9 Skin 0.10 protein_coding synonymous_variant LOW 1026G>C Leu342Leu
M0086377 LGGJHHMI_00071 68607 9 Skin 0.10 protein_coding synonymous_variant LOW 951T>G Leu317Leu
M0086378 LGGJHHMI_00071 68694 9 Skin 0.10 protein_coding synonymous_variant LOW 864A>G Glu288Glu
M0086379 LGGJHHMI_00071 68724 9 Skin 0.10 protein_coding synonymous_variant LOW 834T>C Tyr278Tyr
M0086380 LGGJHHMI_00071 68748 9 Skin 0.10 protein_coding synonymous_variant LOW 810T>C Thr270Thr
M0086381 LGGJHHMI_00071 68762 9 Skin 0.10 protein_coding synonymous_variant LOW 796C>T Leu266Leu
M0086382 LGGJHHMI_00071 68769 9 Skin 0.10 protein_coding synonymous_variant LOW 789C>T Asn263Asn
M0086383 LGGJHHMI_00071 68826 8 Skin 0.09 protein_coding synonymous_variant LOW 732C>G Ala244Ala
M0086384 LGGJHHMI_00071 68859 9 Skin 0.10 protein_coding synonymous_variant LOW 699G>C Leu233Leu
M0086385 LGGJHHMI_00071 68943 9 Skin 0.10 protein_coding synonymous_variant LOW 615C>T Arg205Arg
M0086386 LGGJHHMI_00071 68955 9 Skin 0.10 protein_coding synonymous_variant LOW 603C>G Val201Val
M0086387 LGGJHHMI_00071 68971 9 Skin 0.10 protein_coding missense_variant MODERATE 587G>C Arg196Pro
M0086388 LGGJHHMI_00071 69002 9 Skin 0.10 protein_coding synonymous_variant LOW 556T>C Leu186Leu
M0086389 LGGJHHMI_00071 69006 9 Skin 0.10 protein_coding synonymous_variant LOW 552T>G Gly184Gly
M0086390 LGGJHHMI_00071 69025 9 Skin 0.10 protein_coding missense_variant MODERATE 533A>G Gln178Arg
M0086391 LGGJHHMI_00071 69072 9 Skin 0.10 protein_coding synonymous_variant LOW 486A>C Gly162Gly
M0086392 LGGJHHMI_00071 69122 9 Skin 0.10 protein_coding missense_variant MODERATE 436A>G Asn146Asp
M0086393 LGGJHHMI_00071 69176 9 Skin 0.10 protein_coding synonymous_variant LOW 382C>T Leu128Leu
M0086394 LGGJHHMI_00071 69241 9 Skin 0.10 protein_coding missense_variant MODERATE 317A>T Glu106Val
M0086395 LGGJHHMI_00071 69297 9 Skin 0.10 protein_coding synonymous_variant LOW 261T>C Asp87Asp
M0086396 LGGJHHMI_00071 69308 9 Skin 0.10 protein_coding synonymous_variant LOW 250T>C Leu84Leu
M0086397 LGGJHHMI_00071 69325 9 Skin 0.10 protein_coding missense_variant MODERATE 233A>C His78Pro
M0086398 LGGJHHMI_00073 70524 8 Skin 0.09 protein_coding synonymous_variant LOW 885G>C Leu295Leu
M0086399 LGGJHHMI_00073 70629 8 Skin 0.09 protein_coding synonymous_variant LOW 780C>G Pro260Pro
M0086400 LGGJHHMI_00073 70709 7 Skin 0.08 protein_coding missense_variant MODERATE 700G>T Ala234Ser
M0086401 LGGJHHMI_00073 70731 6 Skin 0.07 protein_coding synonymous_variant LOW 678T>C Ala226Ala
M0086402 LGGJHHMI_00073 70736 6 Skin 0.07 protein_coding missense_variant MODERATE 673C>A Gln225Lys
M0086403 LGGJHHMI_00073 70752 6 Skin 0.07 protein_coding synonymous_variant LOW 657G>C Ala219Ala
M0086404 LGGJHHMI_00073 70757 6 Skin 0.07 protein_coding missense_variant MODERATE 652A>C Ser218Arg
M0086405 LGGJHHMI_00073 70764 6 Skin 0.07 protein_coding synonymous_variant LOW 645T>C Val215Val
M0086406 LGGJHHMI_00073 70822 8 Skin 0.09 protein_coding missense_variant MODERATE 587A>T Gln196Leu
M0086407 LGGJHHMI_00073 70834 8 Skin 0.09 protein_coding missense_variant MODERATE 575C>A Pro192Gln
M0086408 LGGJHHMI_00073 70848 8 Skin 0.09 protein_coding missense_variant MODERATE 561A>C Lys187Asn
M0086409 LGGJHHMI_00073 70852 8 Skin 0.09 protein_coding missense_variant MODERATE 557C>A Thr186Lys
M0086410 LGGJHHMI_00073 70869 8 Skin 0.09 protein_coding synonymous_variant LOW 540C>T Asp180Asp
M0086411 LGGJHHMI_00073 70888 8 Skin 0.09 protein_coding missense_variant MODERATE 521G>A Arg174Gln
M0086412 LGGJHHMI_00073 70891 8 Skin 0.09 protein_coding missense_variant MODERATE 518T>C Met173Thr
M0086413 LGGJHHMI_00073 70896 8 Skin 0.09 protein_coding synonymous_variant LOW 513C>T Ser171Ser
M0086414 LGGJHHMI_00073 70900 8 Skin 0.09 protein_coding missense_variant MODERATE 509C>T Thr170Ile
M0086415 LGGJHHMI_00073 70908 8 Skin 0.09 protein_coding missense_variant MODERATE 501G>C Glu167Asp
M0086416 LGGJHHMI_00073 70919 8 Skin 0.09 protein_coding missense_variant MODERATE 490C>A Gln164Lys
M0086417 LGGJHHMI_00073 71003 9 Skin 0.10 protein_coding synonymous_variant LOW 406T>C Leu136Leu
M0086418 LGGJHHMI_00073 71004 9 Skin 0.10 protein_coding synonymous_variant LOW 405C>T Asp135Asp
M0086419 LGGJHHMI_00073 71016 9 Skin 0.10 protein_coding synonymous_variant LOW 393T>G Gly131Gly
M0086420 LGGJHHMI_00073 71124 9 Skin 0.10 protein_coding synonymous_variant LOW 285G>C Ala95Ala
M0086421 LGGJHHMI_00073 71127 9 Skin 0.10 protein_coding synonymous_variant LOW 282G>T Arg94Arg
M0086422 LGGJHHMI_00073 71158 9 Skin 0.10 protein_coding missense_variant MODERATE 251G>A Arg84Lys
M0086423 LGGJHHMI_00073 71181 9 Skin 0.10 protein_coding synonymous_variant LOW 228A>G Leu76Leu
M0086424 LGGJHHMI_00073 71184 9 Skin 0.10 protein_coding synonymous_variant LOW 225G>A Glu75Glu
M0086425 LGGJHHMI_00073 71202 9 Skin 0.10 protein_coding synonymous_variant LOW 207C>G Val69Val
M0086426 LGGJHHMI_00073 71262 9 Skin 0.10 protein_coding synonymous_variant LOW 147G>A Lys49Lys
M0086427 LGGJHHMI_00073 71288 9 Skin 0.10 protein_coding missense_variant MODERATE 121G>A Gly41Ser
M0086428 LGGJHHMI_00073 71304 9 Skin 0.10 protein_coding synonymous_variant LOW 105G>C Ala35Ala
M0086429 LGGJHHMI_00073 71316 8 Skin 0.09 protein_coding synonymous_variant LOW 93C>A Gly31Gly
M0086430 LGGJHHMI_00073 71337 9 Skin 0.10 protein_coding synonymous_variant LOW 72G>A Lys24Lys
M0086431 LGGJHHMI_00073 71342 8 Skin 0.09 protein_coding missense_variant MODERATE 67A>T Ile23Phe
M0086432 LGGJHHMI_00074 71420 9 Skin 0.10 protein_coding missense_variant MODERATE 893C>G Ala298Gly
M0086433 LGGJHHMI_00074 71451 8 Skin 0.09 protein_coding synonymous_variant LOW 862C>T Leu288Leu
M0086434 LGGJHHMI_00074 71478 7 Skin 0.08 protein_coding synonymous_variant LOW 835C>T Leu279Leu
M0086435 LGGJHHMI_00074 71480 7 Skin 0.08 protein_coding missense_variant MODERATE 833C>T Ala278Val
M0086436 LGGJHHMI_00074 71494 7 Skin 0.08 protein_coding synonymous_variant LOW 819A>G Glu273Glu
M0086437 LGGJHHMI_00074 71502 7 Skin 0.08 protein_coding synonymous_variant LOW 811C>T Leu271Leu
M0086438 LGGJHHMI_00074 71563 6 Skin 0.07 protein_coding synonymous_variant LOW 750G>T Leu250Leu
M0086439 LGGJHHMI_00074 71608 6 Skin 0.07 protein_coding synonymous_variant LOW 705G>A Ala235Ala
M0086440 LGGJHHMI_00074 71698 5 Skin 0.06 protein_coding synonymous_variant LOW 615G>A Ala205Ala
M0086441 LGGJHHMI_00074 71708 5 Skin 0.06 protein_coding missense_variant MODERATE 605A>G His202Arg
M0086442 LGGJHHMI_00074 71730 5 Skin 0.06 protein_coding synonymous_variant LOW 583C>T Leu195Leu
M0086443 LGGJHHMI_00074 71734 5 Skin 0.06 protein_coding missense_variant MODERATE 579C>G Asp193Glu
M0086444 LGGJHHMI_00074 71778 5 Skin 0.06 protein_coding missense_variant MODERATE 535T>G Ser179Ala
M0086445 LGGJHHMI_00074 71779 5 Skin 0.06 protein_coding synonymous_variant LOW 534G>C Val178Val
M0086446 LGGJHHMI_00074 71826 5 Skin 0.06 protein_coding missense_variant MODERATE 487C>T His163Tyr
M0086447 LGGJHHMI_00074 71830 5 Skin 0.06 protein_coding synonymous_variant LOW 483G>A Thr161Thr
M0086448 LGGJHHMI_00074 71839 5 Skin 0.06 protein_coding synonymous_variant LOW 474C>A Ile158Ile
M0086449 LGGJHHMI_00074 71841 5 Skin 0.06 protein_coding missense_variant MODERATE 472A>G Ile158Val
M0086450 LGGJHHMI_00074 71842 5 Skin 0.06 protein_coding synonymous_variant LOW 471G>A Pro157Pro
M0086451 LGGJHHMI_00074 71847 5 Skin 0.06 protein_coding missense_variant MODERATE 466C>G Leu156Val
M0086452 LGGJHHMI_00074 71869 5 Skin 0.06 protein_coding synonymous_variant LOW 444G>C Ser148Ser
M0086453 LGGJHHMI_00074 71897 5 Skin 0.06 protein_coding missense_variant MODERATE 416C>A Ala139Glu
M0086454 LGGJHHMI_00074 71908 5 Skin 0.06 protein_coding synonymous_variant LOW 405T>C Ser135Ser
M0086455 LGGJHHMI_00074 71914 5 Skin 0.06 protein_coding synonymous_variant LOW 399G>A Ala133Ala
M0086456 LGGJHHMI_00074 71944 5 Skin 0.06 protein_coding missense_variant MODERATE 369A>C Glu123Asp
M0086457 LGGJHHMI_00074 71945 5 Skin 0.06 protein_coding missense_variant MODERATE 368A>C Glu123Ala
M0086458 LGGJHHMI_00074 71951 5 Skin 0.06 protein_coding missense_variant MODERATE 362C>A Ala121Glu
M0086459 LGGJHHMI_00074 71981 4 Skin 0.05 protein_coding missense_variant MODERATE 332A>T Gln111Leu
M0086460 LGGJHHMI_00074 71987 4 Skin 0.05 protein_coding missense_variant MODERATE 326A>C Asp109Ala
M0086461 LGGJHHMI_00074 71989 4 Skin 0.05 protein_coding synonymous_variant LOW 324G>A Gln108Gln
M0086462 LGGJHHMI_00074 71991 5 Skin 0.06 protein_coding missense_variant MODERATE 322C>A Gln108Lys
M0086463 LGGJHHMI_00074 71995 4 Skin 0.05 protein_coding synonymous_variant LOW 318G>A Pro106Pro
M0086464 LGGJHHMI_00074 72061 5 Skin 0.06 protein_coding synonymous_variant LOW 252A>C Pro84Pro
M0086465 LGGJHHMI_00060 56828 25 Skin 0.28 protein_coding synonymous_variant LOW 1077A>G Lys359Lys
M0086466 LGGJHHMI_00060 56861 27 Skin 0.31 protein_coding missense_variant MODERATE 1044G>C Glu348Asp
M0086467 LGGJHHMI_00060 56872 25 Skin 0.28 protein_coding missense_variant MODERATE 1033G>A Val345Ile
M0086468 LGGJHHMI_00060 56873 27 Skin 0.31 protein_coding synonymous_variant LOW 1032G>C Ala344Ala
M0086469 LGGJHHMI_00060 56875 27 Skin 0.31 protein_coding missense_variant MODERATE 1030G>A Ala344Thr
M0086470 LGGJHHMI_00060 56932 25 Skin 0.28 protein_coding synonymous_variant LOW 973C>T Leu325Leu
M0086471 LGGJHHMI_00060 57217 26 Skin 0.30 protein_coding synonymous_variant LOW 688C>T Leu230Leu
M0086472 LGGJHHMI_00060 57371 31 Skin 0.35 protein_coding synonymous_variant LOW 534C>T Arg178Arg
M0086473 LGGJHHMI_00066 62481 14 Skin 0.16 protein_coding missense_variant MODERATE 1196A>G Gln399Arg
M0086474 LGGJHHMI_00066 63476 20 Skin 0.23 protein_coding synonymous_variant LOW 201T>G Gly67Gly
M0086475 LGGJHHMI_00066 63603 20 Skin 0.23 protein_coding missense_variant MODERATE 74T>C Ile25Thr
M0086476 LGGJHHMI_00066 63610 21 Skin 0.24 protein_coding missense_variant MODERATE 67C>G Pro23Ala
M0086477 LGGJHHMI_00066 63644 20 Skin 0.23 protein_coding synonymous_variant LOW 33G>C Arg11Arg
M0086478 LGGJHHMI_00066 63648 19 Skin 0.22 protein_coding missense_variant MODERATE 29G>A Arg10His
M0086479 LGGJHHMI_00066 63650 20 Skin 0.23 protein_coding synonymous_variant LOW 27T>G Leu9Leu
M0086480 LGGJHHMI_00066 63653 20 Skin 0.23 protein_coding synonymous_variant LOW 24T>C Phe8Phe
M0086481 LGGJHHMI_00067 63881 22 Skin 0.25 protein_coding synonymous_variant LOW 751T>C Leu251Leu
M0086482 LGGJHHMI_00067 63900 22 Skin 0.25 protein_coding synonymous_variant LOW 732G>C Gly244Gly
M0086483 LGGJHHMI_00067 63924 22 Skin 0.25 protein_coding synonymous_variant LOW 708A>T Pro236Pro
M0086484 LGGJHHMI_00067 64017 22 Skin 0.25 protein_coding synonymous_variant LOW 615A>G Leu205Leu
M0086485 LGGJHHMI_00067 64112 21 Skin 0.24 protein_coding missense_variant MODERATE 520C>T Leu174Phe
M0086486 LGGJHHMI_00067 64299 20 Skin 0.23 protein_coding synonymous_variant LOW 333C>T Asn111Asn
M0086487 LGGJHHMI_00067 64330 20 Skin 0.23 protein_coding missense_variant MODERATE 302G>C Ser101Thr
M0086488 LGGJHHMI_00067 64377 20 Skin 0.23 protein_coding synonymous_variant LOW 255C>A Gly85Gly
M0086489 LGGJHHMI_00067 64404 20 Skin 0.23 protein_coding synonymous_variant LOW 228A>G Ala76Ala
M0086490 LGGJHHMI_00067 64458 20 Skin 0.23 protein_coding synonymous_variant LOW 174A>C Pro58Pro
M0086491 LGGJHHMI_00067 64497 20 Skin 0.23 protein_coding synonymous_variant LOW 135T>C Tyr45Tyr
M0086492 LGGJHHMI_00067 64551 18 Skin 0.20 protein_coding synonymous_variant LOW 81C>G Ala27Ala
M0086493 LGGJHHMI_00067 64556 18 Skin 0.20 protein_coding missense_variant MODERATE 76T>C Phe26Leu
M0086494 LGGJHHMI_00067 64574 19 Skin 0.22 protein_coding missense_variant MODERATE 58A>G Ser20Gly
M0086495 LGGJHHMI_00067 64586 19 Skin 0.22 protein_coding missense_variant MODERATE 46G>T Ala16Ser
M0086496 LGGJHHMI_00067 64599 19 Skin 0.22 protein_coding synonymous_variant LOW 33A>C Arg11Arg
M0086497 LGGJHHMI_00068 64674 17 Skin 0.19 protein_coding missense_variant MODERATE 404C>T Pro135Leu
M0086498 LGGJHHMI_00068 64754 18 Skin 0.20 protein_coding synonymous_variant LOW 324T>C Asp108Asp
M0086499 LGGJHHMI_00068 64787 18 Skin 0.20 protein_coding synonymous_variant LOW 291C>T Arg97Arg
M0086500 LGGJHHMI_00068 64845 18 Skin 0.20 protein_coding missense_variant MODERATE 233G>A Arg78Gln
M0086501 LGGJHHMI_00068 64880 18 Skin 0.20 protein_coding synonymous_variant LOW 198G>A Glu66Glu
M0086502 LGGJHHMI_00068 64912 17 Skin 0.19 protein_coding missense_variant MODERATE 166G>A Val56Ile
M0086503 LGGJHHMI_00068 64928 17 Skin 0.19 protein_coding synonymous_variant LOW 150C>T Ala50Ala
M0086504 LGGJHHMI_00060 56246 19 Skin 0.22 protein_coding synonymous_variant LOW 1659G>C Pro553Pro
M0086505 LGGJHHMI_00060 56264 19 Skin 0.22 protein_coding synonymous_variant LOW 1641A>G Gly547Gly
M0086506 LGGJHHMI_00060 56279 19 Skin 0.22 protein_coding synonymous_variant LOW 1626C>A Arg542Arg
M0086507 LGGJHHMI_00060 56288 19 Skin 0.22 protein_coding synonymous_variant LOW 1617A>G Val539Val
M0086508 LGGJHHMI_00060 56311 18 Skin 0.20 protein_coding missense_variant MODERATE 1594A>G Lys532Glu
M0086509 LGGJHHMI_00060 56331 19 Skin 0.22 protein_coding missense_variant MODERATE 1574T>C Val525Ala
M0086510 LGGJHHMI_00060 56351 18 Skin 0.20 protein_coding synonymous_variant LOW 1554G>A Ala518Ala
M0086511 LGGJHHMI_00060 56354 18 Skin 0.20 protein_coding synonymous_variant LOW 1551C>T Tyr517Tyr
M0086512 LGGJHHMI_00060 56372 18 Skin 0.20 protein_coding synonymous_variant LOW 1533C>G Pro511Pro
M0086513 LGGJHHMI_00060 56459 19 Skin 0.22 protein_coding synonymous_variant LOW 1446T>C Arg482Arg
M0086514 LGGJHHMI_00060 56521 21 Skin 0.24 protein_coding missense_variant MODERATE 1384G>A Gly462Ser
M0086515 LGGJHHMI_00060 56528 21 Skin 0.24 protein_coding synonymous_variant LOW 1377G>A Pro459Pro
M0086516 LGGJHHMI_00060 56560 21 Skin 0.24 protein_coding missense_variant MODERATE 1345C>G Pro449Ala
M0086517 LGGJHHMI_00060 56591 21 Skin 0.24 protein_coding synonymous_variant LOW 1314A>G Ala438Ala
M0086518 LGGJHHMI_00060 56594 21 Skin 0.24 protein_coding synonymous_variant LOW 1311G>A Thr437Thr
M0086519 LGGJHHMI_00060 56599 21 Skin 0.24 protein_coding missense_variant MODERATE 1306C>T Pro436Ser
M0086520 LGGJHHMI_00060 56606 21 Skin 0.24 protein_coding synonymous_variant LOW 1299C>T Thr433Thr
M0086521 LGGJHHMI_00060 56649 21 Skin 0.24 protein_coding missense_variant MODERATE 1256T>C Met419Thr
M0086522 LGGJHHMI_00060 56665 21 Skin 0.24 protein_coding missense_variant MODERATE 1240G>A Val414Ile
M0086523 LGGJHHMI_00060 56683 21 Skin 0.24 protein_coding missense_variant MODERATE 1222T>C Ser408Pro
M0086524 LGGJHHMI_00060 56694 21 Skin 0.24 protein_coding missense_variant MODERATE 1211T>C Ile404Thr
M0086525 LGGJHHMI_00060 56703 21 Skin 0.24 protein_coding missense_variant MODERATE 1202C>T Ala401Val
M0086526 LGGJHHMI_00060 56733 21 Skin 0.24 protein_coding missense_variant MODERATE 1172A>T Gln391Leu
M0086527 LGGJHHMI_00060 56740 21 Skin 0.24 protein_coding missense_variant MODERATE 1165A>C Thr389Pro
M0086528 LGGJHHMI_00060 56750 21 Skin 0.24 protein_coding synonymous_variant LOW 1155A>G Gln385Gln
M0086529 LGGJHHMI_00060 56799 24 Skin 0.27 protein_coding missense_variant MODERATE 1106C>T Ala369Val
M0086530 LGGJHHMI_00060 56161 18 Skin 0.20 protein_coding missense_variant MODERATE 1744G>A Ala582Thr
M0086531 LGGJHHMI_00060 56169 18 Skin 0.20 protein_coding missense_variant MODERATE 1736G>T Ser579Ile
M0086532 LGGJHHMI_00060 56180 18 Skin 0.20 protein_coding synonymous_variant LOW 1725C>T Tyr575Tyr
M0086533 LGGJHHMI_00060 56186 18 Skin 0.20 protein_coding synonymous_variant LOW 1719C>T His573His
M0086534 LGGJHHMI_00064 61341 15 Skin 0.17 protein_coding synonymous_variant LOW 564G>A Pro188Pro
M0086535 LGGJHHMI_00064 61389 15 Skin 0.17 protein_coding synonymous_variant LOW 516G>A Pro172Pro
M0086536 LGGJHHMI_00064 61395 15 Skin 0.17 protein_coding synonymous_variant LOW 510C>T Asp170Asp
M0086537 LGGJHHMI_00064 61406 15 Skin 0.17 protein_coding missense_variant MODERATE 499A>T Thr167Ser
M0086538 LGGJHHMI_00074 72105 4 Skin 0.05 protein_coding missense_variant MODERATE 208A>G Thr70Ala
M0086539 LGGJHHMI_00074 72130 4 Skin 0.05 protein_coding synonymous_variant LOW 183T>C Val61Val
M0086540 LGGJHHMI_00074 72133 4 Skin 0.05 protein_coding synonymous_variant LOW 180T>C Gly60Gly
M0086541 LGGJHHMI_00074 72135 4 Skin 0.05 protein_coding missense_variant MODERATE 178G>A Gly60Ser
M0086542 LGGJHHMI_00074 72138 4 Skin 0.05 protein_coding missense_variant MODERATE 175A>G Thr59Ala
M0086543 LGGJHHMI_00074 72204 4 Skin 0.05 protein_coding missense_variant MODERATE 109C>G Leu37Val
M0086544 LGGJHHMI_00071 68820 8 Skin 0.09 protein_coding synonymous_variant LOW 738T>C Arg246Arg
M0086545 LGGJHHMI_00071 68829 7 Skin 0.08 protein_coding synonymous_variant LOW 729A>G Lys243Lys






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism
LGGJHHMI_00149 ARO:3004069 72.5 5.43e-52 1 117 1.0000 0.9677 fluoroquinolone antibiotic resistance-nodulation-cell division (RND) antibiotic efflux pump antibiotic efflux






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
LGGJHHMI_00390 PHI:10215 pumA 72.9 2e-38 1 96 0.9600 0.9697 nematodes nosocomial infection putative addiction module killer protein increased virulence (hypervirulence)
LGGJHHMI_00435 PHI:10380 RecA 71.3 5.7e-133 1 328 0.9452 0.9398 nematodes nosocomial infection DNA strand exchange and recombination protein reduced virulence
LGGJHHMI_00436 PHI:10380 RecA 72.3 6.7e-66 2 167 0.9486 0.9398 nematodes nosocomial infection DNA strand exchange and recombination protein reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
LGGJHHMI_00073 CAC86814.1|GH23 96 1.37e-232 1 379 0.7929 0.7842
LGGJHHMI_00358 QDW60992.1|GH23 100 8.77e-206 1 305 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term