Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C441
  Reference Plasmid   NZ_CP013346.1
  Reference Plasmid Size   151240
  Reference Plasmid GC Content   0.61
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0087640 KMGLLBDE_00106 112811 3 Skin 0.09 protein_coding synonymous_variant LOW 2049A>G Gln683Gln
M0087641 KMGLLBDE_00106 112814 3 Skin 0.09 protein_coding synonymous_variant LOW 2046T>G Ala682Ala
M0087642 KMGLLBDE_00106 112841 3 Skin 0.09 protein_coding synonymous_variant LOW 2019A>T Ala673Ala
M0087643 KMGLLBDE_00106 112847 3 Skin 0.09 protein_coding synonymous_variant LOW 2013G>C Val671Val
M0087644 KMGLLBDE_00106 112850 3 Skin 0.09 protein_coding synonymous_variant LOW 2010C>G Val670Val
M0087645 KMGLLBDE_00106 112853 3 Skin 0.09 protein_coding synonymous_variant LOW 2007C>T Arg669Arg
M0087646 KMGLLBDE_00106 112903 3 Skin 0.09 protein_coding synonymous_variant LOW 1957T>C Leu653Leu
M0087647 KMGLLBDE_00106 112910 3 Skin 0.09 protein_coding synonymous_variant LOW 1950A>G Ala650Ala
M0087648 KMGLLBDE_00106 112934 3 Skin 0.09 protein_coding synonymous_variant LOW 1926A>G Gln642Gln
M0087649 KMGLLBDE_00106 112952 3 Skin 0.09 protein_coding synonymous_variant LOW 1908C>A Ile636Ile
M0087650 KMGLLBDE_00106 112958 3 Skin 0.09 protein_coding synonymous_variant LOW 1902A>T Ala634Ala
M0087651 KMGLLBDE_00106 112973 3 Skin 0.09 protein_coding synonymous_variant LOW 1887C>T Asp629Asp
M0087652 KMGLLBDE_00106 113000 3 Skin 0.09 protein_coding synonymous_variant LOW 1860C>T Gly620Gly
M0087653 KMGLLBDE_00106 113015 3 Skin 0.09 protein_coding synonymous_variant LOW 1845G>A Gln615Gln
M0087654 KMGLLBDE_00106 113018 3 Skin 0.09 protein_coding synonymous_variant LOW 1842A>G Leu614Leu
M0087655 KMGLLBDE_00106 113024 3 Skin 0.09 protein_coding synonymous_variant LOW 1836C>T Ala612Ala
M0087656 KMGLLBDE_00106 113072 3 Skin 0.09 protein_coding synonymous_variant LOW 1788T>C Ile596Ile
M0087657 KMGLLBDE_00106 113078 3 Skin 0.09 protein_coding synonymous_variant LOW 1782T>C Leu594Leu
M0087658 KMGLLBDE_00106 113108 3 Skin 0.09 protein_coding synonymous_variant LOW 1752A>G Leu584Leu
M0087659 KMGLLBDE_00106 113126 3 Skin 0.09 protein_coding synonymous_variant LOW 1734G>C Val578Val
M0087660 KMGLLBDE_00106 113180 3 Skin 0.09 protein_coding synonymous_variant LOW 1680C>G Gly560Gly
M0087661 KMGLLBDE_00106 113237 3 Skin 0.09 protein_coding missense_variant MODERATE 1623C>G Ile541Met
M0087662 KMGLLBDE_00106 113244 3 Skin 0.09 protein_coding missense_variant MODERATE 1616G>A Arg539Gln
M0087663 KMGLLBDE_00106 113254 3 Skin 0.09 protein_coding missense_variant MODERATE 1606A>G Ile536Val
M0087664 KMGLLBDE_00106 113258 3 Skin 0.09 protein_coding synonymous_variant LOW 1602G>A Gly534Gly
M0087665 KMGLLBDE_00106 113300 3 Skin 0.09 protein_coding synonymous_variant LOW 1560G>C Val520Val
M0087666 KMGLLBDE_00106 113381 3 Skin 0.09 protein_coding synonymous_variant LOW 1479G>C Thr493Thr
M0087667 KMGLLBDE_00106 113437 3 Skin 0.09 protein_coding missense_variant MODERATE 1423A>C Ile475Leu
M0087668 KMGLLBDE_00106 113471 4 Skin 0.12 protein_coding synonymous_variant LOW 1389T>C Leu463Leu
M0087669 KMGLLBDE_00106 113510 4 Skin 0.12 protein_coding synonymous_variant LOW 1350C>A Ala450Ala
M0087670 KMGLLBDE_00106 113519 4 Skin 0.12 protein_coding synonymous_variant LOW 1341C>T Ala447Ala
M0087671 KMGLLBDE_00106 113540 4 Skin 0.12 protein_coding synonymous_variant LOW 1320G>A Ala440Ala
M0087672 KMGLLBDE_00106 113623 5 Skin 0.15 protein_coding missense_variant MODERATE 1237A>G Ser413Gly
M0087673 KMGLLBDE_00106 113743 5 Skin 0.15 protein_coding synonymous_variant LOW 1117T>C Leu373Leu
M0087674 KMGLLBDE_00106 113754 5 Skin 0.15 protein_coding missense_variant MODERATE 1106C>G Thr369Ser
M0087675 KMGLLBDE_00106 113864 5 Skin 0.15 protein_coding synonymous_variant LOW 996G>A Thr332Thr
M0087676 KMGLLBDE_00106 113912 5 Skin 0.15 protein_coding synonymous_variant LOW 948G>A Leu316Leu
M0087677 KMGLLBDE_00106 113914 5 Skin 0.15 protein_coding synonymous_variant LOW 946C>T Leu316Leu
M0087678 KMGLLBDE_00106 113915 5 Skin 0.15 protein_coding synonymous_variant LOW 945A>T Thr315Thr
M0087679 KMGLLBDE_00106 113945 5 Skin 0.15 protein_coding synonymous_variant LOW 915A>T Pro305Pro
M0087680 KMGLLBDE_00106 113951 5 Skin 0.15 protein_coding synonymous_variant LOW 909G>A Glu303Glu
M0087681 KMGLLBDE_00106 113972 5 Skin 0.15 protein_coding synonymous_variant LOW 888A>G Glu296Glu
M0087682 KMGLLBDE_00106 113975 5 Skin 0.15 protein_coding synonymous_variant LOW 885C>G Arg295Arg
M0087683 KMGLLBDE_00106 114019 5 Skin 0.15 protein_coding missense_variant MODERATE 841G>A Ala281Thr
M0087684 KMGLLBDE_00106 114037 5 Skin 0.15 protein_coding missense_variant MODERATE 823A>G Lys275Glu
M0087685 KMGLLBDE_00106 114059 5 Skin 0.15 protein_coding synonymous_variant LOW 801T>C Asp267Asp
M0087686 KMGLLBDE_00106 114119 5 Skin 0.15 protein_coding synonymous_variant LOW 741T>C Asn247Asn
M0087687 KMGLLBDE_00106 114149 5 Skin 0.15 protein_coding synonymous_variant LOW 711G>A Ala237Ala
M0087688 KMGLLBDE_00106 114158 5 Skin 0.15 protein_coding synonymous_variant LOW 702C>A Thr234Thr
M0087689 KMGLLBDE_00106 114242 5 Skin 0.15 protein_coding synonymous_variant LOW 618G>C Thr206Thr
M0087690 KMGLLBDE_00106 114254 5 Skin 0.15 protein_coding synonymous_variant LOW 606T>C Leu202Leu
M0087691 KMGLLBDE_00106 114440 5 Skin 0.15 protein_coding synonymous_variant LOW 420C>T Tyr140Tyr
M0087692 KMGLLBDE_00106 114512 5 Skin 0.15 protein_coding synonymous_variant LOW 348A>G Lys116Lys
M0087693 KMGLLBDE_00106 114542 5 Skin 0.15 protein_coding synonymous_variant LOW 318C>G Ala106Ala
M0087694 KMGLLBDE_00110 123250 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4539G>A None
M0087695 KMGLLBDE_00110 123338 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4627G>C None
M0087696 KMGLLBDE_00110 123339 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4628C>G None
M0087697 KMGLLBDE_00110 123431 5 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4720T>C None
M0087698 KMGLLBDE_00115 123636 5 Skin 0.15 protein_coding synonymous_variant LOW 315C>A Ala105Ala
M0087699 KMGLLBDE_00115 123678 5 Skin 0.15 protein_coding synonymous_variant LOW 273G>A Gln91Gln
M0087700 KMGLLBDE_00115 123694 5 Skin 0.15 protein_coding missense_variant MODERATE 257A>G His86Arg
M0087701 KMGLLBDE_00115 123711 5 Skin 0.15 protein_coding synonymous_variant LOW 240C>T Ala80Ala
M0087702 KMGLLBDE_00115 123776 5 Skin 0.15 protein_coding missense_variant MODERATE 175A>G Ile59Val
M0087703 KMGLLBDE_00115 123777 5 Skin 0.15 protein_coding synonymous_variant LOW 174A>G Lys58Lys
M0087704 KMGLLBDE_00115 123780 5 Skin 0.15 protein_coding synonymous_variant LOW 171T>C His57His
M0087705 KMGLLBDE_00115 123800 5 Skin 0.15 protein_coding missense_variant MODERATE 151G>C Val51Leu
M0087706 KMGLLBDE_00115 123810 5 Skin 0.15 protein_coding synonymous_variant LOW 141C>G Thr47Thr
M0087707 KMGLLBDE_00115 123813 5 Skin 0.15 protein_coding synonymous_variant LOW 138A>G Glu46Glu
M0087708 KMGLLBDE_00115 123834 5 Skin 0.15 protein_coding synonymous_variant LOW 117G>A Gly39Gly
M0087709 KMGLLBDE_00115 123858 5 Skin 0.15 protein_coding synonymous_variant LOW 93T>C Thr31Thr
M0087710 KMGLLBDE_00111 124052 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4344T>C None
M0087711 KMGLLBDE_00111 124060 3 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4352C>T None
M0087712 KMGLLBDE_00001 132 3 Skin 0.09 protein_coding synonymous_variant LOW 30C>T Asn10Asn
M0087713 KMGLLBDE_00001 483 3 Skin 0.09 protein_coding synonymous_variant LOW 381G>A Ala127Ala
M0087714 KMGLLBDE_00001 552 3 Skin 0.09 protein_coding synonymous_variant LOW 450T>C Ile150Ile
M0087715 KMGLLBDE_00001 573 3 Skin 0.09 protein_coding synonymous_variant LOW 471C>T Asp157Asp
M0087716 KMGLLBDE_00001 621 3 Skin 0.09 protein_coding synonymous_variant LOW 519C>T Asp173Asp
M0087717 KMGLLBDE_00001 768 3 Skin 0.09 protein_coding synonymous_variant LOW 666T>A Arg222Arg
M0087718 KMGLLBDE_00001 782 4 Skin 0.12 protein_coding missense_variant MODERATE 680C>G Thr227Ser
M0087719 KMGLLBDE_00001 783 4 Skin 0.12 protein_coding synonymous_variant LOW 681C>T Thr227Thr
M0087720 KMGLLBDE_00001 876 5 Skin 0.15 protein_coding synonymous_variant LOW 774T>C Leu258Leu
M0087721 KMGLLBDE_00001 1092 3 Skin 0.09 protein_coding synonymous_variant LOW 990G>A Pro330Pro
M0087722 KMGLLBDE_00001 1095 3 Skin 0.09 protein_coding synonymous_variant LOW 993C>T Ile331Ile
M0087723 KMGLLBDE_00001 1098 4 Skin 0.12 protein_coding synonymous_variant LOW 996A>G Leu332Leu
M0087724 KMGLLBDE_00001 1236 5 Skin 0.15 protein_coding synonymous_variant LOW 1134T>C His378His
M0087725 KMGLLBDE_00002 1556 6 Skin 0.18 protein_coding synonymous_variant LOW 258A>G Glu86Glu
M0087726 KMGLLBDE_00002 1652 5 Skin 0.15 protein_coding synonymous_variant LOW 354C>T Arg118Arg
M0087727 KMGLLBDE_00002 1661 6 Skin 0.18 protein_coding synonymous_variant LOW 363C>T Ala121Ala
M0087728 KMGLLBDE_00002 1706 6 Skin 0.18 protein_coding synonymous_variant LOW 408C>A Val136Val
M0087729 KMGLLBDE_00002 1913 5 Skin 0.15 protein_coding synonymous_variant LOW 615T>C Ile205Ile
M0087730 KMGLLBDE_00002 2012 4 Skin 0.12 protein_coding synonymous_variant LOW 714T>C Pro238Pro
M0087731 KMGLLBDE_00002 2036 4 Skin 0.12 protein_coding synonymous_variant LOW 738G>A Gln246Gln
M0087732 KMGLLBDE_00002 2048 4 Skin 0.12 protein_coding synonymous_variant LOW 750G>A Glu250Glu
M0087733 KMGLLBDE_00002 2143 4 Skin 0.12 protein_coding missense_variant MODERATE 845T>C Val282Ala
M0087734 KMGLLBDE_00002 2144 4 Skin 0.12 protein_coding synonymous_variant LOW 846T>C Val282Val
M0087735 KMGLLBDE_00002 2165 4 Skin 0.12 protein_coding synonymous_variant LOW 867G>C Ala289Ala
M0087736 KMGLLBDE_00002 2168 4 Skin 0.12 protein_coding synonymous_variant LOW 870G>A Ala290Ala
M0087737 KMGLLBDE_00002 2258 4 Skin 0.12 protein_coding synonymous_variant LOW 960C>T Leu320Leu
M0087738 KMGLLBDE_00002 2297 4 Skin 0.12 protein_coding synonymous_variant LOW 999A>G Leu333Leu
M0087739 KMGLLBDE_00003 2326 4 Skin 0.12 protein_coding synonymous_variant LOW 15C>T Phe5Phe
M0087740 KMGLLBDE_00003 2346 4 Skin 0.12 protein_coding missense_variant MODERATE 35T>C Val12Ala
M0087741 KMGLLBDE_00003 2347 4 Skin 0.12 protein_coding synonymous_variant LOW 36G>C Val12Val
M0087742 KMGLLBDE_00003 2350 4 Skin 0.12 protein_coding synonymous_variant LOW 39C>T Phe13Phe
M0087743 KMGLLBDE_00003 2352 5 Skin 0.15 protein_coding missense_variant MODERATE 41G>C Ser14Thr
M0087744 KMGLLBDE_00003 2369 4 Skin 0.12 protein_coding missense_variant MODERATE 58T>C Phe20Leu
M0087745 KMGLLBDE_00003 2380 4 Skin 0.12 protein_coding missense_variant MODERATE 69G>T Leu23Phe
M0087746 KMGLLBDE_00003 2396 5 Skin 0.15 protein_coding missense_variant MODERATE 85A>G Thr29Ala
M0087747 KMGLLBDE_00003 2399 4 Skin 0.12 protein_coding missense_variant MODERATE 88A>C Asn30His
M0087748 KMGLLBDE_00003 2411 5 Skin 0.15 protein_coding missense_variant MODERATE 100G>A Val34Met
M0087749 KMGLLBDE_00003 2434 5 Skin 0.15 protein_coding synonymous_variant LOW 123C>T Thr41Thr
M0087750 KMGLLBDE_00003 2435 4 Skin 0.12 protein_coding missense_variant MODERATE 124G>A Glu42Lys
M0087751 KMGLLBDE_00003 2436 5 Skin 0.15 protein_coding missense_variant MODERATE 125A>G Glu42Gly
M0087752 KMGLLBDE_00004 2523 3 Skin 0.09 protein_coding synonymous_variant LOW 78C>T Asp26Asp
M0087753 KMGLLBDE_00004 2559 3 Skin 0.09 protein_coding synonymous_variant LOW 114T>C Arg38Arg
M0087754 KMGLLBDE_00004 2619 4 Skin 0.12 protein_coding synonymous_variant LOW 174T>C Asp58Asp
M0087755 KMGLLBDE_00004 2739 3 Skin 0.09 protein_coding synonymous_variant LOW 294C>T Asn98Asn
M0087756 KMGLLBDE_00004 2943 3 Skin 0.09 protein_coding synonymous_variant LOW 498A>G Glu166Glu
M0087757 KMGLLBDE_00004 2982 4 Skin 0.12 protein_coding synonymous_variant LOW 537C>T Ser179Ser
M0087758 KMGLLBDE_00004 3037 3 Skin 0.09 protein_coding synonymous_variant LOW 592T>C Leu198Leu
M0087759 KMGLLBDE_00004 3084 3 Skin 0.09 protein_coding synonymous_variant LOW 639C>A Ala213Ala
M0087760 KMGLLBDE_00004 3352 3 Skin 0.09 protein_coding missense_variant MODERATE 907G>C Ala303Pro
M0087761 KMGLLBDE_00004 3453 3 Skin 0.09 protein_coding synonymous_variant LOW 1008G>A Thr336Thr
M0087762 KMGLLBDE_00004 3456 3 Skin 0.09 protein_coding synonymous_variant LOW 1011T>C Ser337Ser
M0087763 KMGLLBDE_00004 3495 3 Skin 0.09 protein_coding synonymous_variant LOW 1050C>G Ala350Ala
M0087764 KMGLLBDE_00004 3510 3 Skin 0.09 protein_coding synonymous_variant LOW 1065C>T Asn355Asn
M0087765 KMGLLBDE_00004 3513 3 Skin 0.09 protein_coding synonymous_variant LOW 1068A>G Ala356Ala
M0087766 KMGLLBDE_00004 3534 3 Skin 0.09 protein_coding synonymous_variant LOW 1089G>A Arg363Arg
M0087767 KMGLLBDE_00004 3549 3 Skin 0.09 protein_coding synonymous_variant LOW 1104G>T Ala368Ala
M0087768 KMGLLBDE_00004 3564 3 Skin 0.09 protein_coding synonymous_variant LOW 1119T>C Asp373Asp
M0087769 KMGLLBDE_00004 3589 3 Skin 0.09 protein_coding missense_variant MODERATE 1144T>G Ser382Ala
M0087770 KMGLLBDE_00004 3643 3 Skin 0.09 protein_coding synonymous_variant LOW 1198C>T Leu400Leu
M0087771 KMGLLBDE_00004 3657 3 Skin 0.09 protein_coding synonymous_variant LOW 1212C>G Pro404Pro
M0087772 KMGLLBDE_00004 3684 3 Skin 0.09 protein_coding synonymous_variant LOW 1239G>A Lys413Lys
M0087773 KMGLLBDE_00001 828 4 Skin 0.12 protein_coding synonymous_variant LOW 726T>C Ala242Ala
M0087774 KMGLLBDE_00002 1601 4 Skin 0.12 protein_coding synonymous_variant LOW 303C>T Arg101Arg
M0087775 KMGLLBDE_00002 1604 4 Skin 0.12 protein_coding synonymous_variant LOW 306G>T Arg102Arg
M0087776 KMGLLBDE_00002 1607 4 Skin 0.12 protein_coding synonymous_variant LOW 309A>G Lys103Lys
M0087777 KMGLLBDE_00002 1787 3 Skin 0.09 protein_coding synonymous_variant LOW 489T>C Asp163Asp
M0087778 KMGLLBDE_00002 1793 3 Skin 0.09 protein_coding synonymous_variant LOW 495G>A Glu165Glu
M0087779 KMGLLBDE_00002 1823 3 Skin 0.09 protein_coding synonymous_variant LOW 525T>C Asp175Asp
M0087780 KMGLLBDE_00002 1826 3 Skin 0.09 protein_coding synonymous_variant LOW 528T>C Thr176Thr
M0087781 KMGLLBDE_00002 1847 3 Skin 0.09 protein_coding synonymous_variant LOW 549C>A Ala183Ala
M0087782 KMGLLBDE_00002 1865 3 Skin 0.09 protein_coding synonymous_variant LOW 567A>G Val189Val
M0087783 KMGLLBDE_00002 1940 3 Skin 0.09 protein_coding synonymous_variant LOW 642G>C Ala214Ala
M0087784 KMGLLBDE_00002 1961 3 Skin 0.09 protein_coding synonymous_variant LOW 663G>C Val221Val
M0087785 KMGLLBDE_00021 26114 3 Skin 0.09 protein_coding synonymous_variant LOW 240G>T Ala80Ala
M0087786 KMGLLBDE_00021 26270 4 Skin 0.12 protein_coding synonymous_variant LOW 84G>A Val28Val
M0087787 KMGLLBDE_00017 26361 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -3934T>C None
M0087788 KMGLLBDE_00022 26383 4 Skin 0.12 protein_coding missense_variant MODERATE 1456C>A Leu486Ile
M0087789 KMGLLBDE_00022 26385 4 Skin 0.12 protein_coding missense_variant MODERATE 1454C>T Ser485Phe
M0087790 KMGLLBDE_00022 26424 4 Skin 0.12 protein_coding missense_variant MODERATE 1415G>T Cys472Phe
M0087791 KMGLLBDE_00022 26519 4 Skin 0.12 protein_coding synonymous_variant LOW 1320G>A Lys440Lys
M0087792 KMGLLBDE_00022 26609 4 Skin 0.12 protein_coding synonymous_variant LOW 1230A>C Ala410Ala
M0087793 KMGLLBDE_00022 26612 4 Skin 0.12 protein_coding synonymous_variant LOW 1227G>C Thr409Thr
M0087794 KMGLLBDE_00022 26618 4 Skin 0.12 protein_coding synonymous_variant LOW 1221A>G Gln407Gln
M0087795 KMGLLBDE_00022 26621 4 Skin 0.12 protein_coding synonymous_variant LOW 1218T>A Gly406Gly
M0087796 KMGLLBDE_00022 26623 4 Skin 0.12 protein_coding missense_variant MODERATE 1216G>C Gly406Arg
M0087797 KMGLLBDE_00022 26666 4 Skin 0.12 protein_coding synonymous_variant LOW 1173G>C Pro391Pro
M0087798 KMGLLBDE_00022 26669 4 Skin 0.12 protein_coding synonymous_variant LOW 1170A>C Arg390Arg
M0087799 KMGLLBDE_00022 26672 4 Skin 0.12 protein_coding synonymous_variant LOW 1167C>G Thr389Thr
M0087800 KMGLLBDE_00022 26673 4 Skin 0.12 protein_coding missense_variant MODERATE 1166C>G Thr389Ser
M0087801 KMGLLBDE_00022 26675 4 Skin 0.12 protein_coding synonymous_variant LOW 1164A>G Gly388Gly
M0087802 KMGLLBDE_00022 26717 3 Skin 0.09 protein_coding synonymous_variant LOW 1122C>T Ala374Ala
M0087803 KMGLLBDE_00022 26735 4 Skin 0.12 protein_coding synonymous_variant LOW 1104G>T Gly368Gly
M0087804 KMGLLBDE_00022 26741 3 Skin 0.09 protein_coding synonymous_variant LOW 1098A>C Arg366Arg
M0087805 KMGLLBDE_00022 26816 4 Skin 0.12 protein_coding synonymous_variant LOW 1023A>G Val341Val
M0087806 KMGLLBDE_00001 984 3 Skin 0.09 protein_coding synonymous_variant LOW 882C>T Tyr294Tyr
M0087807 KMGLLBDE_00106 113516 3 Skin 0.09 protein_coding synonymous_variant LOW 1344C>T Ala448Ala
M0087808 KMGLLBDE_00106 113577 3 Skin 0.09 protein_coding missense_variant MODERATE 1283G>A Arg428Gln
M0087809 KMGLLBDE_00106 114391 4 Skin 0.12 protein_coding missense_variant MODERATE 469A>G Thr157Ala
M0087810 KMGLLBDE_00106 114423 4 Skin 0.12 protein_coding missense_variant MODERATE 437A>G Asp146Gly
M0087811 KMGLLBDE_00106 114464 4 Skin 0.12 protein_coding synonymous_variant LOW 396C>G Gly132Gly
M0087812 KMGLLBDE_00106 114602 4 Skin 0.12 protein_coding synonymous_variant LOW 258A>G Ser86Ser
M0087813 KMGLLBDE_00106 114605 4 Skin 0.12 protein_coding synonymous_variant LOW 255G>A Lys85Lys
M0087814 KMGLLBDE_00106 114614 4 Skin 0.12 protein_coding synonymous_variant LOW 246T>C Ser82Ser
M0087815 KMGLLBDE_00106 114632 4 Skin 0.12 protein_coding synonymous_variant LOW 228A>G Gly76Gly
M0087816 KMGLLBDE_00106 114635 4 Skin 0.12 protein_coding synonymous_variant LOW 225G>T Ser75Ser
M0087817 KMGLLBDE_00106 114650 4 Skin 0.12 protein_coding synonymous_variant LOW 210T>C Asn70Asn
M0087818 KMGLLBDE_00106 114665 4 Skin 0.12 protein_coding synonymous_variant LOW 195C>G Thr65Thr
M0087819 KMGLLBDE_00106 114743 4 Skin 0.12 protein_coding synonymous_variant LOW 117C>T Ala39Ala
M0087820 KMGLLBDE_00106 114776 4 Skin 0.12 protein_coding synonymous_variant LOW 84T>C Pro28Pro
M0087821 KMGLLBDE_00106 114779 4 Skin 0.12 protein_coding synonymous_variant LOW 81C>T Gly27Gly
M0087822 KMGLLBDE_00106 114785 4 Skin 0.12 protein_coding synonymous_variant LOW 75C>A Gly25Gly
M0087823 KMGLLBDE_00106 114821 4 Skin 0.12 protein_coding synonymous_variant LOW 39G>C Ala13Ala
M0087824 KMGLLBDE_00102 114869 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4840G>A None
M0087825 KMGLLBDE_00102 114915 4 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4886C>T None
M0087826 KMGLLBDE_00107 114974 4 Skin 0.12 protein_coding missense_variant MODERATE 2376T>A Asp792Glu
M0087827 KMGLLBDE_00107 114980 4 Skin 0.12 protein_coding synonymous_variant LOW 2370T>C Ile790Ile
M0087828 KMGLLBDE_00107 115013 4 Skin 0.12 protein_coding synonymous_variant LOW 2337A>C Gly779Gly
M0087829 KMGLLBDE_00107 115031 4 Skin 0.12 protein_coding synonymous_variant LOW 2319G>A Glu773Glu
M0087830 KMGLLBDE_00107 115049 4 Skin 0.12 protein_coding synonymous_variant LOW 2301A>G Glu767Glu
M0087831 KMGLLBDE_00107 115070 4 Skin 0.12 protein_coding synonymous_variant LOW 2280T>C Asn760Asn
M0087832 KMGLLBDE_00107 115088 4 Skin 0.12 protein_coding synonymous_variant LOW 2262A>G Pro754Pro
M0087833 KMGLLBDE_00107 115103 4 Skin 0.12 protein_coding synonymous_variant LOW 2247T>G Ala749Ala
M0087834 KMGLLBDE_00107 115106 4 Skin 0.12 protein_coding synonymous_variant LOW 2244G>A Gln748Gln
M0087835 KMGLLBDE_00107 115145 4 Skin 0.12 protein_coding synonymous_variant LOW 2205G>A Gln735Gln
M0087836 KMGLLBDE_00107 115151 4 Skin 0.12 protein_coding missense_variant MODERATE 2199G>C Glu733Asp
M0087837 KMGLLBDE_00107 115266 4 Skin 0.12 protein_coding missense_variant MODERATE 2084G>A Gly695Glu
M0087838 KMGLLBDE_00107 115298 4 Skin 0.12 protein_coding synonymous_variant LOW 2052A>G Glu684Glu
M0087839 KMGLLBDE_00107 115316 4 Skin 0.12 protein_coding synonymous_variant LOW 2034A>G Gln678Gln
M0087840 KMGLLBDE_00107 115382 3 Skin 0.09 protein_coding missense_variant MODERATE 1968G>C Met656Ile
M0087841 KMGLLBDE_00107 115428 3 Skin 0.09 protein_coding missense_variant MODERATE 1922G>T Gly641Val
M0087842 KMGLLBDE_00107 115429 3 Skin 0.09 protein_coding missense_variant MODERATE 1921G>A Gly641Ser
M0087843 KMGLLBDE_00107 115445 3 Skin 0.09 protein_coding synonymous_variant LOW 1905A>C Thr635Thr
M0087844 KMGLLBDE_00107 115446 3 Skin 0.09 protein_coding missense_variant MODERATE 1904C>T Thr635Ile
M0087845 KMGLLBDE_00106 113620 3 Skin 0.09 protein_coding synonymous_variant LOW 1240C>A Arg414Arg






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group
KMGLLBDE_00086 Chromium (Cr), Methyl Viologen [class: Paraquat], Menadione [class: Naphthoquinone] 73.2 7.2e-65 1 149 0.9868 0.9933 experiment
KMGLLBDE_00085 Chromium (Cr) 75.2 2.5e-99 6 223 0.9776 0.9732 prediction
KMGLLBDE_00086 Chromium (Cr) 77.2 1.7e-67 1 149 0.9868 0.9739 prediction
KMGLLBDE_00092 Chromium (Cr) 77.3 7.2e-100 27 242 0.8889 0.9643 prediction






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
KMGLLBDE_00020 ALJ16657.1|GH23 100 5.82e-214 1 293 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term