Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C455
  Reference Plasmid   NZ_CP017041.1
  Reference Plasmid Size   77702
  Reference Plasmid GC Content   0.61
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0088292 OMKPINEO_00083 72277 7 Skin 0.02 protein_coding missense_variant MODERATE 182C>T Thr61Ile
M0088293 OMKPINEO_00083 72279 6 Skin 0.02 protein_coding synonymous_variant LOW 180T>C Thr60Thr
M0088294 OMKPINEO_00083 72395 7 Skin 0.02 protein_coding missense_variant MODERATE 64G>A Val22Ile
M0088295 OMKPINEO_00083 72453 6 Skin 0.02 protein_coding synonymous_variant LOW 6A>C Ile2Ile
M0088296 OMKPINEO_00084 72735 7 Skin 0.02 protein_coding missense_variant MODERATE 80C>T Thr27Ile
M0088297 OMKPINEO_00018 18490 80 Skin 0.22 protein_coding synonymous_variant LOW 330C>T Ala110Ala
M0088298 OMKPINEO_00018 18520 53 Skin 0.14 protein_coding synonymous_variant LOW 360C>T Ala120Ala
M0088299 OMKPINEO_00018 18527 80 Skin 0.22 protein_coding synonymous_variant LOW 367C>T Leu123Leu
M0088300 OMKPINEO_00018 18584 81 Skin 0.22 protein_coding missense_variant MODERATE 424A>G Thr142Ala
M0088301 OMKPINEO_00019 18816 79 Skin 0.21 protein_coding missense_variant MODERATE 256G>A Ala86Thr
M0088302 OMKPINEO_00020 19155 74 Skin 0.20 protein_coding synonymous_variant LOW 231T>C Ala77Ala
M0088303 OMKPINEO_00020 19298 66 Skin 0.18 protein_coding missense_variant MODERATE 88G>A Ala30Thr
M0088304 OMKPINEO_00057 54749 4 Skin 0.01 protein_coding missense_variant MODERATE 695G>A Gly232Asp
M0088305 OMKPINEO_00057 54755 4 Skin 0.01 protein_coding missense_variant MODERATE 701G>A Gly234Glu
M0088306 OMKPINEO_00057 54896 6 Skin 0.02 protein_coding missense_variant MODERATE 842T>C Leu281Pro
M0088307 OMKPINEO_00057 54966 6 Skin 0.02 protein_coding missense_variant MODERATE 912A>C Lys304Asn
M0088308 OMKPINEO_00057 55055 6 Skin 0.02 protein_coding missense_variant MODERATE 1001G>A Arg334Gln
M0088309 OMKPINEO_00057 55242 7 Skin 0.02 protein_coding missense_variant MODERATE 1188C>A Asp396Glu
M0088310 OMKPINEO_00057 55243 7 Skin 0.02 protein_coding missense_variant MODERATE 1189G>A Glu397Lys
M0088311 OMKPINEO_00057 55244 7 Skin 0.02 protein_coding missense_variant MODERATE 1190A>C Glu397Ala
M0088312 OMKPINEO_00057 55246 7 Skin 0.02 protein_coding synonymous_variant LOW 1192C>T Leu398Leu
M0088313 OMKPINEO_00057 55260 7 Skin 0.02 protein_coding synonymous_variant LOW 1206T>C Ile402Ile
M0088314 OMKPINEO_00057 55554 7 Skin 0.02 protein_coding synonymous_variant LOW 1500T>C Arg500Arg
M0088315 OMKPINEO_00057 55555 7 Skin 0.02 protein_coding missense_variant MODERATE 1501A>G Thr501Ala
M0088316 OMKPINEO_00016 17438 68 Skin 0.18 protein_coding synonymous_variant LOW 12T>C Ile4Ile
M0088317 OMKPINEO_00017 17643 73 Skin 0.20 protein_coding synonymous_variant LOW 127C>T Leu43Leu
M0088318 OMKPINEO_00017 17966 78 Skin 0.21 protein_coding synonymous_variant LOW 450A>G Gln150Gln
M0088319 OMKPINEO_00083 71985 80 Skin 0.22 protein_coding synonymous_variant LOW 474A>G Leu158Leu
M0088320 OMKPINEO_00087 74229 26 Skin 0.07 protein_coding synonymous_variant LOW 282A>G Pro94Pro
M0088321 OMKPINEO_00083 75863 23 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3405A>G None
M0088322 OMKPINEO_00083 75913 22 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3455G>A None
M0088323 OMKPINEO_00083 76317 9 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3859A>G None
M0088324 OMKPINEO_00024 21180 11 Skin 0.03 protein_coding missense_variant MODERATE 301G>A Ala101Thr
M0088325 OMKPINEO_00024 21212 6 Skin 0.02 protein_coding missense_variant MODERATE 269G>A Arg90His
M0088326 OMKPINEO_00058 56237 10 Skin 0.03 protein_coding synonymous_variant LOW 636T>C Tyr212Tyr
M0088327 OMKPINEO_00058 56263 10 Skin 0.03 protein_coding missense_variant MODERATE 662T>C Met221Thr
M0088328 OMKPINEO_00058 56267 5 Skin 0.01 protein_coding synonymous_variant LOW 666G>A Lys222Lys
M0088329 OMKPINEO_00058 56286 5 Skin 0.01 protein_coding missense_variant MODERATE 685G>C Ala229Pro
M0088330 OMKPINEO_00058 56294 5 Skin 0.01 protein_coding synonymous_variant LOW 693G>A Glu231Glu
M0088331 OMKPINEO_00058 56297 5 Skin 0.01 protein_coding synonymous_variant LOW 696G>A Lys232Lys
M0088332 OMKPINEO_00058 56327 5 Skin 0.01 protein_coding synonymous_variant LOW 726C>T Cys242Cys
M0088333 OMKPINEO_00058 56330 5 Skin 0.01 protein_coding synonymous_variant LOW 729G>A Pro243Pro
M0088334 OMKPINEO_00058 56331 5 Skin 0.01 protein_coding missense_variant MODERATE 730A>G Thr244Ala
M0088335 OMKPINEO_00072 62830 14 Skin 0.04 protein_coding missense_variant MODERATE 524A>G Tyr175Cys
M0088336 OMKPINEO_00073 63731 12 Skin 0.03 protein_coding synonymous_variant LOW 117A>C Pro39Pro
M0088337 OMKPINEO_00074 64194 7 Skin 0.02 protein_coding missense_variant MODERATE 203G>T Gly68Val
M0088338 OMKPINEO_00065 60034 4 Skin 0.01 protein_coding synonymous_variant LOW 351T>G Pro117Pro
M0088339 OMKPINEO_00023 25390 7 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4636T>C None
M0088340 OMKPINEO_00029 25488 6 Skin 0.02 protein_coding missense_variant MODERATE 68A>G His23Arg
M0088341 OMKPINEO_00029 25510 10 Skin 0.03 protein_coding synonymous_variant LOW 90C>T Leu30Leu
M0088342 OMKPINEO_00029 25553 9 Skin 0.02 protein_coding missense_variant MODERATE 133C>T Pro45Ser
M0088343 OMKPINEO_00029 25554 7 Skin 0.02 protein_coding missense_variant MODERATE 134C>T Pro45Leu
M0088344 OMKPINEO_00029 25555 7 Skin 0.02 protein_coding synonymous_variant LOW 135C>T Pro45Pro
M0088345 OMKPINEO_00029 25568 6 Skin 0.02 protein_coding missense_variant MODERATE 148A>G Thr50Ala
M0088346 OMKPINEO_00029 25569 6 Skin 0.02 protein_coding missense_variant MODERATE 149C>T Thr50Met
M0088347 OMKPINEO_00029 25590 7 Skin 0.02 protein_coding missense_variant MODERATE 170G>C Cys57Ser
M0088348 OMKPINEO_00029 25607 7 Skin 0.02 protein_coding missense_variant MODERATE 187C>T Pro63Ser
M0088349 OMKPINEO_00029 25621 7 Skin 0.02 protein_coding synonymous_variant LOW 201A>G Arg67Arg
M0088350 OMKPINEO_00029 25804 7 Skin 0.02 protein_coding synonymous_variant LOW 384C>T Tyr128Tyr
M0088351 OMKPINEO_00029 25936 7 Skin 0.02 protein_coding synonymous_variant LOW 516A>G Ser172Ser
M0088352 OMKPINEO_00030 26171 6 Skin 0.02 protein_coding missense_variant MODERATE 158A>G Gln53Arg
M0088353 OMKPINEO_00030 26197 8 Skin 0.02 protein_coding missense_variant MODERATE 184G>A Ala62Thr
M0088354 OMKPINEO_00030 26198 6 Skin 0.02 protein_coding missense_variant MODERATE 185C>T Ala62Val
M0088355 OMKPINEO_00030 26205 9 Skin 0.02 protein_coding synonymous_variant LOW 192G>A Glu64Glu
M0088356 OMKPINEO_00030 26208 9 Skin 0.02 protein_coding synonymous_variant LOW 195G>A Lys65Lys
M0088357 OMKPINEO_00030 26209 9 Skin 0.02 protein_coding missense_variant MODERATE 196A>G Lys66Glu
M0088358 OMKPINEO_00030 26212 9 Skin 0.02 protein_coding missense_variant MODERATE 199T>C Cys67Arg
M0088359 OMKPINEO_00030 26214 9 Skin 0.02 protein_coding synonymous_variant LOW 201C>T Cys67Cys
M0088360 OMKPINEO_00030 26217 9 Skin 0.02 protein_coding synonymous_variant LOW 204C>T Gly68Gly
M0088361 OMKPINEO_00030 26274 9 Skin 0.02 protein_coding synonymous_variant LOW 261T>C Arg87Arg
M0088362 OMKPINEO_00030 26288 6 Skin 0.02 protein_coding missense_variant MODERATE 275G>A Arg92His
M0088363 OMKPINEO_00030 26298 9 Skin 0.02 protein_coding synonymous_variant LOW 285C>T Gly95Gly
M0088364 OMKPINEO_00030 26325 7 Skin 0.02 protein_coding synonymous_variant LOW 312A>G Val104Val
M0088365 OMKPINEO_00030 26343 7 Skin 0.02 protein_coding synonymous_variant LOW 330C>T Asn110Asn
M0088366 OMKPINEO_00030 26346 6 Skin 0.02 protein_coding synonymous_variant LOW 333T>C Asp111Asp
M0088367 OMKPINEO_00030 26367 7 Skin 0.02 protein_coding synonymous_variant LOW 354C>T Asp118Asp
M0088368 OMKPINEO_00030 26383 9 Skin 0.02 protein_coding missense_variant MODERATE 370T>C Tyr124His
M0088369 OMKPINEO_00030 26385 9 Skin 0.02 protein_coding synonymous_variant LOW 372C>T Tyr124Tyr
M0088370 OMKPINEO_00030 26393 7 Skin 0.02 protein_coding missense_variant MODERATE 380A>G Lys127Arg
M0088371 OMKPINEO_00030 26403 7 Skin 0.02 protein_coding synonymous_variant LOW 390A>G Lys130Lys
M0088372 OMKPINEO_00030 26412 7 Skin 0.02 protein_coding synonymous_variant LOW 399C>T Gly133Gly
M0088373 OMKPINEO_00030 26433 6 Skin 0.02 protein_coding synonymous_variant LOW 420G>T Arg140Arg
M0088374 OMKPINEO_00030 26454 6 Skin 0.02 protein_coding synonymous_variant LOW 441T>C His147His
M0088375 OMKPINEO_00030 26460 7 Skin 0.02 protein_coding synonymous_variant LOW 447A>G Ser149Ser
M0088376 OMKPINEO_00030 26463 7 Skin 0.02 protein_coding synonymous_variant LOW 450C>T Cys150Cys
M0088377 OMKPINEO_00030 26472 7 Skin 0.02 protein_coding synonymous_variant LOW 459A>G Ser153Ser
M0088378 OMKPINEO_00030 26484 6 Skin 0.02 protein_coding synonymous_variant LOW 471C>T Ile157Ile
M0088379 OMKPINEO_00030 26493 6 Skin 0.02 protein_coding synonymous_variant LOW 480T>C Asn160Asn
M0088380 OMKPINEO_00030 26496 6 Skin 0.02 protein_coding synonymous_variant LOW 483T>C Pro161Pro
M0088381 OMKPINEO_00030 26499 7 Skin 0.02 protein_coding synonymous_variant LOW 486C>T Asp162Asp
M0088382 OMKPINEO_00030 26568 7 Skin 0.02 protein_coding synonymous_variant LOW 555C>T Arg185Arg
M0088383 OMKPINEO_00030 26592 7 Skin 0.02 protein_coding synonymous_variant LOW 579A>G Arg193Arg
M0088384 OMKPINEO_00030 26604 6 Skin 0.02 protein_coding synonymous_variant LOW 591C>A Ala197Ala
M0088385 OMKPINEO_00030 26646 7 Skin 0.02 protein_coding synonymous_variant LOW 633C>T Thr211Thr
M0088386 OMKPINEO_00030 26652 7 Skin 0.02 protein_coding synonymous_variant LOW 639C>T Tyr213Tyr
M0088387 OMKPINEO_00030 26655 7 Skin 0.02 protein_coding synonymous_variant LOW 642G>A Glu214Glu
M0088388 OMKPINEO_00030 27243 8 Skin 0.02 protein_coding synonymous_variant LOW 1230C>T Cys410Cys
M0088389 OMKPINEO_00030 27279 8 Skin 0.02 protein_coding synonymous_variant LOW 1266A>G Thr422Thr
M0088390 OMKPINEO_00030 27374 8 Skin 0.02 protein_coding missense_variant MODERATE 1361A>G Asn454Ser
M0088391 OMKPINEO_00058 56021 5 Skin 0.01 protein_coding synonymous_variant LOW 420C>A Arg140Arg
M0088392 OMKPINEO_00058 56024 5 Skin 0.01 protein_coding synonymous_variant LOW 423C>A Gly141Gly
M0088393 OMKPINEO_00058 56027 5 Skin 0.01 protein_coding synonymous_variant LOW 426G>A Arg142Arg
M0088394 OMKPINEO_00058 56078 5 Skin 0.01 protein_coding synonymous_variant LOW 477G>A Ala159Ala
M0088395 OMKPINEO_00058 56192 5 Skin 0.01 protein_coding synonymous_variant LOW 591T>C Asp197Asp
M0088396 OMKPINEO_00058 56207 5 Skin 0.01 protein_coding synonymous_variant LOW 606A>G Leu202Leu
M0088397 OMKPINEO_00058 56210 5 Skin 0.01 protein_coding synonymous_variant LOW 609C>T Pro203Pro
M0088398 OMKPINEO_00058 56213 5 Skin 0.01 protein_coding synonymous_variant LOW 612T>C Pro204Pro
M0088399 OMKPINEO_00092 77179 5 Skin 0.01 protein_coding synonymous_variant LOW 267C>T Pro89Pro
M0088400 OMKPINEO_00092 77281 6 Skin 0.02 protein_coding synonymous_variant LOW 369T>C Tyr123Tyr
M0088401 OMKPINEO_00092 77309 5 Skin 0.01 protein_coding synonymous_variant LOW 397C>T Leu133Leu
M0088402 OMKPINEO_00092 77330 5 Skin 0.01 protein_coding missense_variant MODERATE 418C>T Arg140Trp
M0088403 OMKPINEO_00092 77354 5 Skin 0.01 protein_coding missense_variant MODERATE 442C>T His148Tyr
M0088404 OMKPINEO_00092 77356 5 Skin 0.01 protein_coding synonymous_variant LOW 444C>T His148His
M0088405 OMKPINEO_00092 77359 5 Skin 0.01 protein_coding missense_variant MODERATE 447C>G Asp149Glu
M0088406 OMKPINEO_00092 77383 6 Skin 0.02 protein_coding synonymous_variant LOW 471C>A Leu157Leu
M0088407 OMKPINEO_00092 77387 6 Skin 0.02 protein_coding missense_variant MODERATE 475A>G Ile159Val
M0088408 OMKPINEO_00038 37644 5 Skin 0.01 protein_coding missense_variant MODERATE 53G>C Ser18Thr
M0088409 OMKPINEO_00040 39149 5 Skin 0.01 protein_coding missense_variant MODERATE 20T>C Leu7Pro
M0088410 OMKPINEO_00023 20564 4 Skin 0.01 protein_coding missense_variant MODERATE 191G>A Ser64Asn
M0088411 OMKPINEO_00023 20574 4 Skin 0.01 protein_coding missense_variant MODERATE 181G>A Glu61Lys
M0088412 OMKPINEO_00023 20592 4 Skin 0.01 protein_coding missense_variant MODERATE 163G>A Gly55Ser
M0088413 OMKPINEO_00023 20666 5 Skin 0.01 protein_coding missense_variant MODERATE 89T>C Leu30Pro
M0088414 OMKPINEO_00023 20740 5 Skin 0.01 protein_coding synonymous_variant LOW 15T>C Asp5Asp
M0088415 OMKPINEO_00013 20906 6 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4935G>A None
M0088416 OMKPINEO_00013 20931 6 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4960G>A None
M0088417 OMKPINEO_00012 14445 63 Skin 0.17 protein_coding missense_variant MODERATE 1009A>G Asn337Asp
M0088418 OMKPINEO_00012 15304 77 Skin 0.21 protein_coding synonymous_variant LOW 150A>G Ala50Ala
M0088419 OMKPINEO_00013 15873 80 Skin 0.22 protein_coding synonymous_variant LOW 99A>G Glu33Glu
M0088420 OMKPINEO_00014 16237 14 Skin 0.04 protein_coding missense_variant MODERATE 365G>A Arg122His
M0088421 OMKPINEO_00014 16434 76 Skin 0.21 protein_coding synonymous_variant LOW 168C>T Gly56Gly
M0088422 OMKPINEO_00014 16528 76 Skin 0.21 protein_coding missense_variant MODERATE 74G>T Arg25Leu
M0088423 OMKPINEO_00014 16569 75 Skin 0.20 protein_coding synonymous_variant LOW 33G>A Ser11Ser
M0088424 OMKPINEO_00004 10533 13 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2297A>G None
M0088425 OMKPINEO_00007 10917 14 Skin 0.04 protein_coding synonymous_variant LOW 291G>A Thr97Thr
M0088426 OMKPINEO_00008 11423 24 Skin 0.07 protein_coding missense_variant MODERATE 629A>G His210Arg
M0088427 OMKPINEO_00008 11744 18 Skin 0.05 protein_coding missense_variant MODERATE 308C>T Ser103Phe
M0088428 OMKPINEO_00009 12232 24 Skin 0.07 protein_coding missense_variant MODERATE 208A>G Thr70Ala
M0088429 OMKPINEO_00009 12304 24 Skin 0.07 protein_coding missense_variant MODERATE 136A>G Ile46Val
M0088430 OMKPINEO_00009 12349 22 Skin 0.06 protein_coding missense_variant MODERATE 91C>G Arg31Gly
M0088431 OMKPINEO_00009 12369 25 Skin 0.07 protein_coding missense_variant MODERATE 71T>C Leu24Ser
M0088432 OMKPINEO_00010 12472 23 Skin 0.06 protein_coding synonymous_variant LOW 114A>G Leu38Leu
M0088433 OMKPINEO_00010 12496 23 Skin 0.06 protein_coding synonymous_variant LOW 90T>C Asp30Asp
M0088434 OMKPINEO_00010 12553 24 Skin 0.07 protein_coding synonymous_variant LOW 33A>G Ser11Ser
M0088435 OMKPINEO_00004 12597 27 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4361C>T None
M0088436 OMKPINEO_00004 12800 28 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4564A>G None
M0088437 OMKPINEO_00011 13110 25 Skin 0.07 protein_coding synonymous_variant LOW 645G>A Leu215Leu
M0088438 OMKPINEO_00011 13126 26 Skin 0.07 protein_coding missense_variant MODERATE 629G>T Arg210Leu
M0088439 OMKPINEO_00011 13185 24 Skin 0.07 protein_coding synonymous_variant LOW 570A>C Arg190Arg
M0088440 OMKPINEO_00011 13188 9 Skin 0.02 protein_coding synonymous_variant LOW 567C>T Gly189Gly
M0088441 OMKPINEO_00011 13409 42 Skin 0.11 protein_coding missense_variant MODERATE 346A>G Lys116Glu
M0088442 OMKPINEO_00012 13942 42 Skin 0.11 protein_coding synonymous_variant LOW 1512T>C Ala504Ala
M0088443 OMKPINEO_00012 14576 6 Skin 0.02 protein_coding missense_variant MODERATE 878C>A Pro293Gln
M0088444 OMKPINEO_00013 15920 18 Skin 0.05 protein_coding missense_variant MODERATE 52A>G Thr18Ala
M0088445 OMKPINEO_00016 17289 19 Skin 0.05 protein_coding missense_variant MODERATE 161C>T Pro54Leu
M0088446 OMKPINEO_00016 17338 19 Skin 0.05 protein_coding synonymous_variant LOW 112A>C Arg38Arg
M0088447 OMKPINEO_00004 6713 7 Skin 0.02 protein_coding synonymous_variant LOW 1524T>G Pro508Pro
M0088448 OMKPINEO_00012 15409 16 Skin 0.04 protein_coding synonymous_variant LOW 45C>A Pro15Pro
M0088449 OMKPINEO_00083 72154 7 Skin 0.02 protein_coding missense_variant MODERATE 305T>C Val102Ala
M0088450 OMKPINEO_00083 72273 4 Skin 0.01 protein_coding synonymous_variant LOW 186T>C Gly62Gly
M0088451 OMKPINEO_00012 13833 4 Skin 0.01 protein_coding missense_variant MODERATE 1621G>A Glu541Lys
M0088452 OMKPINEO_00012 13836 4 Skin 0.01 protein_coding synonymous_variant LOW 1618T>C Leu540Leu
M0088453 OMKPINEO_00012 13837 4 Skin 0.01 protein_coding synonymous_variant LOW 1617T>C Pro539Pro
M0088454 OMKPINEO_00012 13840 4 Skin 0.01 protein_coding synonymous_variant LOW 1614C>T Gly538Gly
M0088455 OMKPINEO_00012 13843 4 Skin 0.01 protein_coding synonymous_variant LOW 1611G>C Pro537Pro
M0088456 OMKPINEO_00012 13846 4 Skin 0.01 protein_coding synonymous_variant LOW 1608G>A Leu536Leu
M0088457 OMKPINEO_00012 13848 4 Skin 0.01 protein_coding synonymous_variant LOW 1606T>C Leu536Leu
M0088458 OMKPINEO_00012 13965 8 Skin 0.02 protein_coding missense_variant MODERATE 1489C>G Leu497Val
M0088459 OMKPINEO_00014 16184 9 Skin 0.02 protein_coding missense_variant MODERATE 418G>C Glu140Gln
M0088460 OMKPINEO_00014 16316 10 Skin 0.03 protein_coding missense_variant MODERATE 286G>A Asp96Asn
M0088461 OMKPINEO_00014 16318 10 Skin 0.03 protein_coding missense_variant MODERATE 284C>A Pro95Gln
M0088462 OMKPINEO_00015 16765 10 Skin 0.03 protein_coding missense_variant MODERATE 211A>G Ile71Val
M0088463 OMKPINEO_00015 16767 10 Skin 0.03 protein_coding missense_variant MODERATE 209G>C Gly70Ala
M0088464 OMKPINEO_00015 16770 9 Skin 0.02 protein_coding missense_variant MODERATE 206C>T Pro69Leu
M0088465 OMKPINEO_00016 17440 8 Skin 0.02 protein_coding missense_variant MODERATE 10A>C Ile4Leu
M0088466 OMKPINEO_00010 17455 16 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -4870C>T None
M0088467 OMKPINEO_00010 17458 15 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -4873C>T None
M0088468 OMKPINEO_00010 17473 9 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4888C>T None
M0088469 OMKPINEO_00017 17585 9 Skin 0.02 protein_coding synonymous_variant LOW 69G>A Arg23Arg
M0088470 OMKPINEO_00017 17586 9 Skin 0.02 protein_coding missense_variant MODERATE 70T>G Ser24Ala
M0088471 OMKPINEO_00017 17927 8 Skin 0.02 protein_coding synonymous_variant LOW 411C>A Ala137Ala
M0088472 OMKPINEO_00011 18141 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4387C>T None
M0088473 OMKPINEO_00011 18147 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4393A>G None
M0088474 OMKPINEO_00011 18149 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4395G>A None
M0088475 OMKPINEO_00018 18167 10 Skin 0.03 protein_coding synonymous_variant LOW 7C>T Leu3Leu
M0088476 OMKPINEO_00018 18169 10 Skin 0.03 protein_coding synonymous_variant LOW 9A>G Leu3Leu
M0088477 OMKPINEO_00018 18351 9 Skin 0.02 protein_coding missense_variant MODERATE 191C>T Thr64Ile
M0088478 OMKPINEO_00004 10307 6 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2071A>G None
M0088479 OMKPINEO_00004 10317 7 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2081C>T None
M0088480 OMKPINEO_00004 10351 7 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2115T>G None
M0088481 OMKPINEO_00004 10356 19 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2120T>G None
M0088482 OMKPINEO_00004 10429 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2193T>C None
M0088483 OMKPINEO_00004 10505 7 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -2269T>A None
M0088484 OMKPINEO_00007 10872 8 Skin 0.02 protein_coding synonymous_variant LOW 246G>A Val82Val
M0088485 OMKPINEO_00004 11308 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3072G>A None
M0088486 OMKPINEO_00004 11323 6 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3087C>T None
M0088487 OMKPINEO_00008 11359 8 Skin 0.02 protein_coding missense_variant MODERATE 693G>A Met231Ile
M0088488 OMKPINEO_00008 11405 6 Skin 0.02 protein_coding missense_variant MODERATE 647G>A Ser216Asn
M0088489 OMKPINEO_00008 11524 9 Skin 0.02 protein_coding synonymous_variant LOW 528A>G Gly176Gly
M0088490 OMKPINEO_00008 11637 7 Skin 0.02 protein_coding synonymous_variant LOW 415C>T Leu139Leu
M0088491 OMKPINEO_00004 12124 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3888A>G None
M0088492 OMKPINEO_00017 17649 6 Skin 0.02 protein_coding missense_variant MODERATE 133G>A Gly45Arg
M0088493 OMKPINEO_00075 65994 8 Skin 0.02 protein_coding missense_variant MODERATE 770T>G Leu257Arg
M0088494 OMKPINEO_00077 67295 6 Skin 0.02 protein_coding synonymous_variant LOW 45C>G Thr15Thr
M0088495 OMKPINEO_00078 67971 6 Skin 0.02 protein_coding synonymous_variant LOW 270C>T Ile90Ile
M0088496 OMKPINEO_00012 14503 4 Skin 0.01 protein_coding synonymous_variant LOW 951C>T Val317Val
M0088497 OMKPINEO_00012 13987 4 Skin 0.01 protein_coding synonymous_variant LOW 1467A>T Ala489Ala
M0088498 OMKPINEO_00016 17418 8 Skin 0.02 protein_coding missense_variant MODERATE 32A>G Asp11Gly
M0088499 OMKPINEO_00060 58433 23 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1317A>G None
M0088500 OMKPINEO_00029 25696 5 Skin 0.01 protein_coding synonymous_variant LOW 276T>C Ser92Ser
M0088501 OMKPINEO_00057 54962 4 Skin 0.01 protein_coding missense_variant MODERATE 908A>C Lys303Thr
M0088502 OMKPINEO_00057 54971 4 Skin 0.01 protein_coding missense_variant MODERATE 917T>C Ile306Thr
M0088503 OMKPINEO_00057 55092 4 Skin 0.01 protein_coding synonymous_variant LOW 1038G>A Pro346Pro
M0088504 OMKPINEO_00057 55278 4 Skin 0.01 protein_coding synonymous_variant LOW 1224C>T Ala408Ala
M0088505 OMKPINEO_00005 9102 4 Skin 0.01 protein_coding synonymous_variant LOW 132T>C Cys44Cys
M0088506 OMKPINEO_00006 9637 13 Skin 0.04 protein_coding missense_variant MODERATE 599A>G Tyr200Cys
M0088507 OMKPINEO_00006 9680 4 Skin 0.01 protein_coding missense_variant MODERATE 556G>A Val186Ile
M0088508 OMKPINEO_00006 9708 4 Skin 0.01 protein_coding synonymous_variant LOW 528T>C Gly176Gly
M0088509 OMKPINEO_00006 9816 4 Skin 0.01 protein_coding synonymous_variant LOW 420T>C Pro140Pro
M0088510 OMKPINEO_00012 13778 4 Skin 0.01 protein_coding missense_variant MODERATE 1676T>C Val559Ala
M0088511 OMKPINEO_00012 13780 4 Skin 0.01 protein_coding synonymous_variant LOW 1674A>G Gln558Gln
M0088512 OMKPINEO_00012 13867 4 Skin 0.01 protein_coding synonymous_variant LOW 1587G>A Arg529Arg
M0088513 OMKPINEO_00012 13957 4 Skin 0.01 protein_coding synonymous_variant LOW 1497T>C Ala499Ala
M0088514 OMKPINEO_00075 71176 6 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4413G>T None
M0088515 OMKPINEO_00012 13874 9 Skin 0.02 protein_coding missense_variant MODERATE 1580A>G Asp527Gly
M0088516 OMKPINEO_00001 419 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *755A>G None
M0088517 OMKPINEO_00001 530 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *644C>T None
M0088518 OMKPINEO_00001 545 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *629T>G None
M0088519 OMKPINEO_00001 548 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *626G>A None
M0088520 OMKPINEO_00001 551 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *623G>A None
M0088521 OMKPINEO_00001 595 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *579T>C None
M0088522 OMKPINEO_00001 600 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *574G>C None
M0088523 OMKPINEO_00001 613 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *561T>C None
M0088524 OMKPINEO_00001 616 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *558A>C None
M0088525 OMKPINEO_00001 627 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *547A>G None
M0088526 OMKPINEO_00001 715 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *459T>G None
M0088527 OMKPINEO_00001 785 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *389G>C None
M0088528 OMKPINEO_00001 796 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *378T>C None
M0088529 OMKPINEO_00001 825 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *349G>A None
M0088530 OMKPINEO_00001 972 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *202T>G None
M0088531 OMKPINEO_00001 997 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *177G>A None
M0088532 OMKPINEO_00001 1015 4 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *159A>C None
M0088533 OMKPINEO_00001 1017 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *157T>C None
M0088534 OMKPINEO_00001 1027 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *147A>G None
M0088535 OMKPINEO_00001 1038 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *136T>C None
M0088536 OMKPINEO_00001 1150 5 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *24T>C None
M0088537 OMKPINEO_00001 1258 5 Skin 0.01 protein_coding synonymous_variant LOW 1224T>A Gly408Gly
M0088538 OMKPINEO_00001 1543 5 Skin 0.01 protein_coding synonymous_variant LOW 939T>C Gly313Gly
M0088539 OMKPINEO_00001 2193 5 Skin 0.01 protein_coding missense_variant MODERATE 289A>G Ile97Val
M0088540 OMKPINEO_00001 2195 5 Skin 0.01 protein_coding missense_variant MODERATE 287A>G Lys96Arg
M0088541 OMKPINEO_00002 2861 5 Skin 0.01 protein_coding synonymous_variant LOW 321T>C Ile107Ile
M0088542 OMKPINEO_00003 3356 4 Skin 0.01 protein_coding missense_variant MODERATE 1562T>G Ile521Ser
M0088543 OMKPINEO_00004 6620 6 Skin 0.02 protein_coding synonymous_variant LOW 1617C>T Ala539Ala
M0088544 OMKPINEO_00004 6923 4 Skin 0.01 protein_coding synonymous_variant LOW 1314C>T Asn438Asn
M0088545 OMKPINEO_00004 6926 4 Skin 0.01 protein_coding synonymous_variant LOW 1311G>A Glu437Glu
M0088546 OMKPINEO_00004 6998 5 Skin 0.01 protein_coding synonymous_variant LOW 1239G>A Gln413Gln
M0088547 OMKPINEO_00004 7058 5 Skin 0.01 protein_coding synonymous_variant LOW 1179T>C Asp393Asp
M0088548 OMKPINEO_00004 7142 5 Skin 0.01 protein_coding synonymous_variant LOW 1095C>T Gly365Gly
M0088549 OMKPINEO_00004 7159 5 Skin 0.01 protein_coding missense_variant MODERATE 1078T>C Ser360Pro
M0088550 OMKPINEO_00004 7184 5 Skin 0.01 protein_coding synonymous_variant LOW 1053C>T Tyr351Tyr
M0088551 OMKPINEO_00004 7283 4 Skin 0.01 protein_coding synonymous_variant LOW 954T>C Asp318Asp
M0088552 OMKPINEO_00004 7316 4 Skin 0.01 protein_coding synonymous_variant LOW 921G>A Leu307Leu
M0088553 OMKPINEO_00004 7326 4 Skin 0.01 protein_coding missense_variant MODERATE 911T>C Phe304Ser
M0088554 OMKPINEO_00004 7331 4 Skin 0.01 protein_coding synonymous_variant LOW 906T>C Phe302Phe
M0088555 OMKPINEO_00004 7337 4 Skin 0.01 protein_coding missense_variant MODERATE 900C>A Asp300Glu
M0088556 OMKPINEO_00004 7350 4 Skin 0.01 protein_coding missense_variant MODERATE 887G>A Arg296Lys
M0088557 OMKPINEO_00004 7376 4 Skin 0.01 protein_coding synonymous_variant LOW 861T>C Gly287Gly
M0088558 OMKPINEO_00004 7420 4 Skin 0.01 protein_coding missense_variant MODERATE 817T>C Ser273Pro
M0088559 OMKPINEO_00004 7489 6 Skin 0.02 protein_coding missense_variant MODERATE 748G>A Glu250Lys
M0088560 OMKPINEO_00004 7565 5 Skin 0.01 protein_coding synonymous_variant LOW 672T>C Ala224Ala
M0088561 OMKPINEO_00004 7571 5 Skin 0.01 protein_coding synonymous_variant LOW 666T>C Cys222Cys
M0088562 OMKPINEO_00004 7604 5 Skin 0.01 protein_coding synonymous_variant LOW 633T>C Pro211Pro
M0088563 OMKPINEO_00004 7632 5 Skin 0.01 protein_coding missense_variant MODERATE 605T>C Val202Ala
M0088564 OMKPINEO_00004 7842 5 Skin 0.01 protein_coding missense_variant MODERATE 395T>C Val132Ala
M0088565 OMKPINEO_00004 7856 5 Skin 0.01 protein_coding synonymous_variant LOW 381A>G Thr127Thr
M0088566 OMKPINEO_00004 7988 8 Skin 0.02 protein_coding synonymous_variant LOW 249A>G Gly83Gly
M0088567 OMKPINEO_00016 17232 9 Skin 0.02 protein_coding missense_variant MODERATE 218C>T Ala73Val
M0088568 OMKPINEO_00016 17236 7 Skin 0.02 protein_coding missense_variant MODERATE 214T>G Ser72Ala
M0088569 OMKPINEO_00016 17238 7 Skin 0.02 protein_coding missense_variant MODERATE 212T>G Val71Gly
M0088570 OMKPINEO_00001 155 4 Skin 0.01 protein_coding downstream_gene_variant MODIFIER *1019A>G None
M0088571 OMKPINEO_00004 10240 12 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2004A>C None
M0088572 OMKPINEO_00055 53156 9 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -187C>T None
M0088573 OMKPINEO_00004 7985 6 Skin 0.02 protein_coding synonymous_variant LOW 252A>G Arg84Arg
M0088574 OMKPINEO_00004 8182 6 Skin 0.02 protein_coding missense_variant MODERATE 55C>G Arg19Gly
M0088575 OMKPINEO_00005 9071 6 Skin 0.02 protein_coding missense_variant MODERATE 163G>A Ala55Thr
M0088576 OMKPINEO_00006 9765 7 Skin 0.02 protein_coding synonymous_variant LOW 471A>G Lys157Lys
M0088577 OMKPINEO_00006 9959 7 Skin 0.02 protein_coding missense_variant MODERATE 277C>G Leu93Val
M0088578 OMKPINEO_00004 10263 11 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2027T>G None
M0088579 OMKPINEO_00008 11592 12 Skin 0.03 protein_coding missense_variant MODERATE 460G>T Asp154Tyr
M0088580 OMKPINEO_00012 13821 6 Skin 0.02 protein_coding missense_variant MODERATE 1633A>G Thr545Ala
M0088581 OMKPINEO_00008 16038 11 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3987C>T None
M0088582 OMKPINEO_00018 18232 4 Skin 0.01 protein_coding synonymous_variant LOW 72C>T Asp24Asp
M0088583 OMKPINEO_00018 18234 4 Skin 0.01 protein_coding missense_variant MODERATE 74A>G His25Arg
M0088584 OMKPINEO_00018 18235 4 Skin 0.01 protein_coding synonymous_variant LOW 75C>T His25His
M0088585 OMKPINEO_00018 18256 4 Skin 0.01 protein_coding synonymous_variant LOW 96C>T Leu32Leu
M0088586 OMKPINEO_00018 18262 4 Skin 0.01 protein_coding synonymous_variant LOW 102C>T Thr34Thr
M0088587 OMKPINEO_00018 18266 4 Skin 0.01 protein_coding missense_variant MODERATE 106A>G Thr36Ala
M0088588 OMKPINEO_00018 18307 4 Skin 0.01 protein_coding synonymous_variant LOW 147C>T Asp49Asp
M0088589 OMKPINEO_00018 18313 4 Skin 0.01 protein_coding synonymous_variant LOW 153C>T Leu51Leu
M0088590 OMKPINEO_00018 18319 4 Skin 0.01 protein_coding synonymous_variant LOW 159A>T Arg53Arg
M0088591 OMKPINEO_00018 18330 4 Skin 0.01 protein_coding missense_variant MODERATE 170C>T Thr57Ile
M0088592 OMKPINEO_00018 18337 4 Skin 0.01 protein_coding synonymous_variant LOW 177C>T Pro59Pro
M0088593 OMKPINEO_00018 18342 4 Skin 0.01 protein_coding missense_variant MODERATE 182A>T Asp61Val
M0088594 OMKPINEO_00018 18346 4 Skin 0.01 protein_coding synonymous_variant LOW 186C>T Pro62Pro
M0088595 OMKPINEO_00018 18349 4 Skin 0.01 protein_coding synonymous_variant LOW 189C>T Thr63Thr
M0088596 OMKPINEO_00018 18359 4 Skin 0.01 protein_coding missense_variant MODERATE 199A>G Lys67Glu
M0088597 OMKPINEO_00018 18365 4 Skin 0.01 protein_coding missense_variant MODERATE 205A>G Thr69Ala
M0088598 OMKPINEO_00062 57579 6 Skin 0.02 protein_coding missense_variant MODERATE 265A>G Thr89Ala
M0088599 OMKPINEO_00024 21461 9 Skin 0.02 protein_coding missense_variant MODERATE 20C>T Ala7Val
M0088600 OMKPINEO_00014 21573 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4972C>T None
M0088601 OMKPINEO_00008 15972 4 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -3921C>A None
M0088602 OMKPINEO_00004 12122 6 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -3886T>C None
M0088603 OMKPINEO_00014 21486 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4885G>A None
M0088604 OMKPINEO_00014 21499 8 Skin 0.02 protein_coding upstream_gene_variant MODIFIER -4898T>G None
M0088605 OMKPINEO_00092 77461 4 Skin 0.01 protein_coding synonymous_variant LOW 549A>G Glu183Glu
M0088606 OMKPINEO_00092 77478 4 Skin 0.01 protein_coding missense_variant MODERATE 566A>C Asp189Ala
M0088607 OMKPINEO_00084 77513 4 Skin 0.01 protein_coding upstream_gene_variant MODIFIER -4699T>C None
M0088608 OMKPINEO_00011 13721 5 Skin 0.01 protein_coding missense_variant MODERATE 34G>T Val12Leu
M0088609 OMKPINEO_00011 13724 5 Skin 0.01 protein_coding synonymous_variant LOW 31C>T Leu11Leu
M0088610 OMKPINEO_00011 13728 5 Skin 0.01 protein_coding synonymous_variant LOW 27G>A Gln9Gln
M0088611 OMKPINEO_00011 13731 5 Skin 0.01 protein_coding synonymous_variant LOW 24T>C Ala8Ala
M0088612 OMKPINEO_00012 13912 5 Skin 0.01 protein_coding synonymous_variant LOW 1542G>A Ala514Ala






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group
OMKPINEO_00084 Cobalt (Co), Nickel (Ni) 100 2.2e-62 1 119 1.0000 1.0000 prediction






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
OMKPINEO_00031 ALT45754.1|GH184 80.6 5.52e-195 1 353 0.9972 0.9972
OMKPINEO_00049 AOH46880.1|CBM50 100 0 1 1025 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term