Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C496
  Reference Plasmid   NZ_CP024183.1
  Reference Plasmid Size   58635
  Reference Plasmid GC Content   0.41
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0089997 HBOALHBP_00032 22109 5 Skin 0.05 protein_coding missense_variant MODERATE 751C>T Arg251Cys
M0089998 HBOALHBP_00032 22371 9 Skin 0.09 protein_coding synonymous_variant LOW 489A>G Thr163Thr
M0089999 HBOALHBP_00032 22467 13 Skin 0.13 protein_coding synonymous_variant LOW 393C>T Asn131Asn
M0090000 HBOALHBP_00032 22533 11 Skin 0.11 protein_coding synonymous_variant LOW 327G>A Val109Val
M0090001 HBOALHBP_00032 22641 12 Skin 0.12 protein_coding synonymous_variant LOW 219C>T Phe73Phe
M0090002 HBOALHBP_00025 22964 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4868A>G None
M0090003 HBOALHBP_00025 23026 8 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4930G>A None
M0090004 HBOALHBP_00025 23056 7 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4960C>T None
M0090005 HBOALHBP_00001 220 4 Skin 0.04 protein_coding synonymous_variant LOW 120G>A Val40Val
M0090006 HBOALHBP_00001 284 5 Skin 0.05 protein_coding missense_variant MODERATE 184G>T Ala62Ser
M0090007 HBOALHBP_00001 442 4 Skin 0.04 protein_coding synonymous_variant LOW 342G>A Glu114Glu
M0090008 HBOALHBP_00001 490 3 Skin 0.03 protein_coding synonymous_variant LOW 390T>C Ile130Ile
M0090009 HBOALHBP_00001 508 3 Skin 0.03 protein_coding synonymous_variant LOW 408G>A Pro136Pro
M0090010 HBOALHBP_00001 523 3 Skin 0.03 protein_coding synonymous_variant LOW 423A>G Leu141Leu
M0090011 HBOALHBP_00002 1709 7 Skin 0.07 protein_coding synonymous_variant LOW 777T>C Tyr259Tyr
M0090012 HBOALHBP_00004 1864 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2033T>C None
M0090013 HBOALHBP_00004 1890 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2007T>C None
M0090014 HBOALHBP_00004 1939 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -1958T>A None
M0090015 HBOALHBP_00004 1954 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -1943A>G None
M0090016 HBOALHBP_00004 1961 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -1936C>T None
M0090017 HBOALHBP_00004 2005 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1892C>A None
M0090018 HBOALHBP_00004 2014 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1883G>A None
M0090019 HBOALHBP_00003 2087 3 Skin 0.03 protein_coding missense_variant MODERATE 1177T>C Tyr393His
M0090020 HBOALHBP_00003 2766 3 Skin 0.03 protein_coding synonymous_variant LOW 498T>A Arg166Arg
M0090021 HBOALHBP_00063 56058 3 Skin 0.03 protein_coding synonymous_variant LOW 342T>G Gly114Gly
M0090022 HBOALHBP_00066 57985 3 Skin 0.03 protein_coding missense_variant MODERATE 319A>G Asn107Asp
M0090023 HBOALHBP_00066 58001 3 Skin 0.03 protein_coding synonymous_variant LOW 303G>T Ala101Ala
M0090024 HBOALHBP_00042 35292 6 Skin 0.06 protein_coding missense_variant MODERATE 1166G>T Trp389Leu
M0090025 HBOALHBP_00042 35467 10 Skin 0.10 protein_coding missense_variant MODERATE 991T>C Phe331Leu
M0090026 HBOALHBP_00042 35489 11 Skin 0.11 protein_coding synonymous_variant LOW 969G>T Pro323Pro
M0090027 HBOALHBP_00042 35497 14 Skin 0.14 protein_coding missense_variant MODERATE 961T>G Leu321Val
M0090028 HBOALHBP_00042 35510 10 Skin 0.10 protein_coding synonymous_variant LOW 948G>A Leu316Leu
M0090029 HBOALHBP_00042 35539 10 Skin 0.10 protein_coding missense_variant MODERATE 919G>A Val307Ile
M0090030 HBOALHBP_00042 35603 11 Skin 0.11 protein_coding synonymous_variant LOW 855C>T Gly285Gly
M0090031 HBOALHBP_00042 35768 4 Skin 0.04 protein_coding synonymous_variant LOW 690G>T Gly230Gly
M0090032 HBOALHBP_00042 35789 15 Skin 0.15 protein_coding missense_variant MODERATE 669A>G Ile223Met
M0090033 HBOALHBP_00042 36116 16 Skin 0.16 protein_coding synonymous_variant LOW 342A>G Ala114Ala
M0090034 HBOALHBP_00040 36528 12 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -2757T>C None
M0090035 HBOALHBP_00040 36582 13 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2811G>A None
M0090036 HBOALHBP_00040 36641 16 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -2870T>C None
M0090037 HBOALHBP_00040 36691 15 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -2920G>T None
M0090038 HBOALHBP_00040 36716 16 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -2945A>T None
M0090039 HBOALHBP_00040 36721 16 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -2950A>G None
M0090040 HBOALHBP_00040 36763 16 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -2992A>G None
M0090041 HBOALHBP_00044 38436 8 Skin 0.08 protein_coding synonymous_variant LOW 1093C>T Leu365Leu
M0090042 HBOALHBP_00057 52585 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2609T>C None
M0090043 HBOALHBP_00057 52605 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2629A>G None
M0090044 HBOALHBP_00061 52663 4 Skin 0.04 protein_coding synonymous_variant LOW 39C>T Phe13Phe
M0090045 HBOALHBP_00061 52669 10 Skin 0.10 protein_coding synonymous_variant LOW 45T>C Ala15Ala
M0090046 HBOALHBP_00061 52673 5 Skin 0.05 protein_coding missense_variant MODERATE 49T>G Leu17Val
M0090047 HBOALHBP_00061 52675 9 Skin 0.09 protein_coding missense_variant MODERATE 51G>C Leu17Phe
M0090048 HBOALHBP_00061 52678 9 Skin 0.09 protein_coding synonymous_variant LOW 54A>G Val18Val
M0090049 HBOALHBP_00061 52684 9 Skin 0.09 protein_coding synonymous_variant LOW 60C>T Phe20Phe
M0090050 HBOALHBP_00061 52692 9 Skin 0.09 protein_coding missense_variant MODERATE 68G>T Trp23Leu
M0090051 HBOALHBP_00061 52693 9 Skin 0.09 protein_coding missense_variant MODERATE 69G>T Trp23Cys
M0090052 HBOALHBP_00061 52696 9 Skin 0.09 protein_coding synonymous_variant LOW 72A>G Leu24Leu
M0090053 HBOALHBP_00061 52698 9 Skin 0.09 protein_coding missense_variant MODERATE 74T>C Ile25Thr
M0090054 HBOALHBP_00061 52705 9 Skin 0.09 protein_coding synonymous_variant LOW 81T>G Leu27Leu
M0090055 HBOALHBP_00061 52716 9 Skin 0.09 protein_coding missense_variant MODERATE 92A>C Asn31Thr
M0090056 HBOALHBP_00061 52742 12 Skin 0.12 protein_coding missense_variant MODERATE 118C>A Arg40Ser
M0090057 HBOALHBP_00062 52963 13 Skin 0.13 protein_coding missense_variant MODERATE 173A>G Gln58Arg
M0090058 HBOALHBP_00062 53126 11 Skin 0.11 protein_coding synonymous_variant LOW 336C>T Thr112Thr
M0090059 HBOALHBP_00062 53231 8 Skin 0.08 protein_coding synonymous_variant LOW 441T>C Asn147Asn
M0090060 HBOALHBP_00062 54172 17 Skin 0.18 protein_coding missense_variant MODERATE 1382G>A Arg461Lys
M0090061 HBOALHBP_00062 55008 17 Skin 0.18 protein_coding missense_variant MODERATE 2218A>G Ile740Val
M0090062 HBOALHBP_00062 55037 16 Skin 0.16 protein_coding missense_variant MODERATE 2247A>T Glu749Asp
M0090063 HBOALHBP_00003 7642 8 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4379T>C None
M0090064 HBOALHBP_00011 7746 6 Skin 0.06 protein_coding synonymous_variant LOW 84G>A Glu28Glu
M0090065 HBOALHBP_00034 23558 12 Skin 0.12 protein_coding stop_gained HIGH 1285G>T Glu429*
M0090066 HBOALHBP_00034 24065 7 Skin 0.07 protein_coding synonymous_variant LOW 778C>T Leu260Leu
M0090067 HBOALHBP_00034 24192 8 Skin 0.08 protein_coding synonymous_variant LOW 651C>T Asn217Asn
M0090068 HBOALHBP_00034 24443 4 Skin 0.04 protein_coding missense_variant MODERATE 400T>C Phe134Leu
M0090069 HBOALHBP_00034 24527 5 Skin 0.05 protein_coding missense_variant MODERATE 316G>A Val106Ile
M0090070 HBOALHBP_00034 24528 5 Skin 0.05 protein_coding synonymous_variant LOW 315G>T Ala105Ala
M0090071 HBOALHBP_00034 24564 6 Skin 0.06 protein_coding synonymous_variant LOW 279A>G Leu93Leu
M0090072 HBOALHBP_00034 24569 6 Skin 0.06 protein_coding missense_variant MODERATE 274G>A Ala92Thr
M0090073 HBOALHBP_00034 24603 5 Skin 0.05 protein_coding synonymous_variant LOW 240C>G Val80Val
M0090074 HBOALHBP_00029 24897 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4665G>T None
M0090075 HBOALHBP_00029 24913 7 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4681C>T None
M0090076 HBOALHBP_00029 24944 7 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4712C>T None
M0090077 HBOALHBP_00029 24992 7 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4760T>C None
M0090078 HBOALHBP_00035 25218 7 Skin 0.07 protein_coding synonymous_variant LOW 750T>G Ser250Ser
M0090079 HBOALHBP_00035 25287 6 Skin 0.06 protein_coding synonymous_variant LOW 681T>C Gly227Gly
M0090080 HBOALHBP_00035 25609 5 Skin 0.05 protein_coding missense_variant MODERATE 359A>T Glu120Val
M0090081 HBOALHBP_00035 25647 3 Skin 0.03 protein_coding synonymous_variant LOW 321G>C Leu107Leu
M0090082 HBOALHBP_00035 25751 7 Skin 0.07 protein_coding missense_variant MODERATE 217A>G Ile73Val
M0090083 HBOALHBP_00035 25838 5 Skin 0.05 protein_coding missense_variant MODERATE 130C>G Gln44Glu
M0090084 HBOALHBP_00042 35321 3 Skin 0.03 protein_coding missense_variant MODERATE 1137C>G Ile379Met
M0090085 HBOALHBP_00042 35453 4 Skin 0.04 protein_coding synonymous_variant LOW 1005G>A Thr335Thr
M0090086 HBOALHBP_00042 36146 13 Skin 0.13 protein_coding synonymous_variant LOW 312G>A Gln104Gln
M0090087 HBOALHBP_00053 52000 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4719A>T None
M0090088 HBOALHBP_00060 52162 4 Skin 0.04 protein_coding missense_variant MODERATE 121T>G Cys41Gly
M0090089 HBOALHBP_00057 52320 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2344G>A None
M0090090 HBOALHBP_00057 52321 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2345T>A None
M0090091 HBOALHBP_00057 52329 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2353T>G None
M0090092 HBOALHBP_00057 52479 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2503T>C None
M0090093 HBOALHBP_00057 52480 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2504C>A None
M0090094 HBOALHBP_00057 52486 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2510A>C None
M0090095 HBOALHBP_00057 52488 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2512G>A None
M0090096 HBOALHBP_00062 53487 3 Skin 0.03 protein_coding missense_variant MODERATE 697G>A Val233Ile
M0090097 HBOALHBP_00062 53797 3 Skin 0.03 protein_coding missense_variant MODERATE 1007G>T Gly336Val
M0090098 HBOALHBP_00062 53805 3 Skin 0.03 protein_coding missense_variant MODERATE 1015G>A Ala339Thr
M0090099 HBOALHBP_00062 54026 4 Skin 0.04 protein_coding missense_variant MODERATE 1236A>G Ile412Met
M0090100 HBOALHBP_00062 55148 5 Skin 0.05 protein_coding synonymous_variant LOW 2358A>G Arg786Arg
M0090101 HBOALHBP_00062 55153 4 Skin 0.04 protein_coding missense_variant MODERATE 2363G>A Arg788Lys
M0090102 HBOALHBP_00063 55168 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -549G>A None
M0090103 HBOALHBP_00011 8079 4 Skin 0.04 protein_coding synonymous_variant LOW 417A>G Thr139Thr
M0090104 HBOALHBP_00012 8345 3 Skin 0.03 protein_coding synonymous_variant LOW 210T>C Val70Val
M0090105 HBOALHBP_00012 8348 3 Skin 0.03 protein_coding synonymous_variant LOW 213A>G Leu71Leu
M0090106 HBOALHBP_00015 11911 5 Skin 0.05 protein_coding missense_variant MODERATE 143A>C Asp48Ala
M0090107 HBOALHBP_00015 11929 5 Skin 0.05 protein_coding missense_variant MODERATE 125C>T Ala42Val
M0090108 HBOALHBP_00015 11995 5 Skin 0.05 protein_coding missense_variant MODERATE 59T>C Val20Ala
M0090109 HBOALHBP_00015 12002 5 Skin 0.05 protein_coding missense_variant MODERATE 52A>G Ile18Val
M0090110 HBOALHBP_00015 12849 6 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -796A>G None
M0090111 HBOALHBP_00018 12922 6 Skin 0.06 protein_coding stop_gained HIGH 502G>T Glu168*
M0090112 HBOALHBP_00018 12980 6 Skin 0.06 protein_coding synonymous_variant LOW 444G>T Val148Val
M0090113 HBOALHBP_00018 12983 4 Skin 0.04 protein_coding synonymous_variant LOW 441A>G Ala147Ala
M0090114 HBOALHBP_00002 1241 4 Skin 0.04 protein_coding synonymous_variant LOW 309T>C Gly103Gly
M0090115 HBOALHBP_00042 36065 3 Skin 0.03 protein_coding missense_variant MODERATE 393G>T Gln131His
M0090116 HBOALHBP_00042 36387 13 Skin 0.13 protein_coding missense_variant MODERATE 71A>G Asn24Ser
M0090117 HBOALHBP_00024 20349 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2763A>G None
M0090118 HBOALHBP_00030 20442 5 Skin 0.05 protein_coding synonymous_variant LOW 447A>G Gly149Gly
M0090119 HBOALHBP_00030 20481 4 Skin 0.04 protein_coding synonymous_variant LOW 408G>A Leu136Leu
M0090120 HBOALHBP_00030 20724 6 Skin 0.06 protein_coding synonymous_variant LOW 165T>C Tyr55Tyr
M0090121 HBOALHBP_00030 20838 6 Skin 0.06 protein_coding synonymous_variant LOW 51C>T Thr17Thr
M0090122 HBOALHBP_00024 20914 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3328C>T None
M0090123 HBOALHBP_00024 20939 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3353A>C None
M0090124 HBOALHBP_00031 20960 4 Skin 0.04 protein_coding missense_variant MODERATE 710G>A Gly237Asp
M0090125 HBOALHBP_00031 20986 4 Skin 0.04 protein_coding synonymous_variant LOW 684A>G Val228Val
M0090126 HBOALHBP_00031 21073 7 Skin 0.07 protein_coding synonymous_variant LOW 597G>A Gln199Gln
M0090127 HBOALHBP_00031 21129 3 Skin 0.03 protein_coding missense_variant MODERATE 541T>C Ser181Pro
M0090128 HBOALHBP_00031 21151 3 Skin 0.03 protein_coding synonymous_variant LOW 519C>T Asp173Asp
M0090129 HBOALHBP_00031 21366 3 Skin 0.03 protein_coding missense_variant MODERATE 304G>C Glu102Gln
M0090130 HBOALHBP_00031 21403 4 Skin 0.04 protein_coding synonymous_variant LOW 267C>G Gly89Gly
M0090131 HBOALHBP_00024 21704 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4118T>C None
M0090132 HBOALHBP_00024 21804 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -4218A>G None
M0090133 HBOALHBP_00034 23729 7 Skin 0.07 protein_coding missense_variant MODERATE 1114T>A Phe372Ile
M0090134 HBOALHBP_00034 24278 3 Skin 0.03 protein_coding missense_variant MODERATE 565G>T Ala189Ser
M0090135 HBOALHBP_00035 25536 4 Skin 0.04 protein_coding synonymous_variant LOW 432T>C Pro144Pro
M0090136 HBOALHBP_00035 25699 3 Skin 0.03 protein_coding missense_variant MODERATE 269G>C Ser90Thr
M0090137 HBOALHBP_00035 25701 3 Skin 0.03 protein_coding synonymous_variant LOW 267C>T Asn89Asn
M0090138 HBOALHBP_00032 22773 4 Skin 0.04 protein_coding synonymous_variant LOW 87A>G Leu29Leu
M0090139 HBOALHBP_00027 23537 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4594T>C None
M0090140 HBOALHBP_00003 5589 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2326A>C None
M0090141 HBOALHBP_00003 5595 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2332G>A None
M0090142 HBOALHBP_00010 7254 5 Skin 0.05 protein_coding synonymous_variant LOW 66T>C Asp22Asp
M0090143 HBOALHBP_00003 7407 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4144T>A None
M0090144 HBOALHBP_00032 21942 4 Skin 0.04 protein_coding synonymous_variant LOW 918T>G Thr306Thr
M0090145 HBOALHBP_00032 22512 4 Skin 0.04 protein_coding synonymous_variant LOW 348T>C Tyr116Tyr
M0090146 HBOALHBP_00002 1172 3 Skin 0.03 protein_coding synonymous_variant LOW 240C>G Val80Val
M0090147 HBOALHBP_00002 1464 3 Skin 0.03 protein_coding missense_variant MODERATE 532A>G Asn178Asp
M0090148 HBOALHBP_00002 1667 3 Skin 0.03 protein_coding synonymous_variant LOW 735T>C Leu245Leu
M0090149 HBOALHBP_00030 20631 3 Skin 0.03 protein_coding synonymous_variant LOW 258C>T Ser86Ser
M0090150 HBOALHBP_00030 20642 3 Skin 0.03 protein_coding missense_variant MODERATE 247A>G Ile83Val
M0090151 HBOALHBP_00025 22998 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4902C>A None
M0090152 HBOALHBP_00025 23087 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4991C>T None
M0090153 HBOALHBP_00033 23159 4 Skin 0.04 protein_coding missense_variant MODERATE 60A>G Ile20Met
M0090154 HBOALHBP_00034 23819 6 Skin 0.06 protein_coding missense_variant MODERATE 1024A>G Lys342Glu
M0090155 HBOALHBP_00042 36017 10 Skin 0.10 protein_coding synonymous_variant LOW 441G>A Leu147Leu
M0090156 HBOALHBP_00042 36178 8 Skin 0.08 protein_coding synonymous_variant LOW 280C>T Leu94Leu
M0090157 HBOALHBP_00042 36389 9 Skin 0.09 protein_coding synonymous_variant LOW 69T>C Ala23Ala
M0090158 HBOALHBP_00007 5679 3 Skin 0.03 protein_coding synonymous_variant LOW 183G>A Leu61Leu
M0090159 HBOALHBP_00007 5691 3 Skin 0.03 protein_coding missense_variant MODERATE 171C>A Ser57Arg
M0090160 HBOALHBP_00007 5692 3 Skin 0.03 protein_coding missense_variant MODERATE 170G>C Ser57Thr
M0090161 HBOALHBP_00007 5693 3 Skin 0.03 protein_coding missense_variant MODERATE 169A>G Ser57Gly
M0090162 HBOALHBP_00007 5694 3 Skin 0.03 protein_coding synonymous_variant LOW 168C>T Cys56Cys
M0090163 HBOALHBP_00007 5697 3 Skin 0.03 protein_coding synonymous_variant LOW 165T>C Asp55Asp
M0090164 HBOALHBP_00007 5699 3 Skin 0.03 protein_coding missense_variant MODERATE 163G>A Asp55Asn
M0090165 HBOALHBP_00007 5700 3 Skin 0.03 protein_coding synonymous_variant LOW 162T>C Leu54Leu
M0090166 HBOALHBP_00003 5944 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -2681A>T None
M0090167 HBOALHBP_00009 6337 3 Skin 0.03 protein_coding missense_variant MODERATE 10T>C Tyr4His
M0090168 HBOALHBP_00009 6348 3 Skin 0.03 protein_coding synonymous_variant LOW 21A>G Lys7Lys
M0090169 HBOALHBP_00010 6882 3 Skin 0.03 protein_coding missense_variant MODERATE 438A>G Ile146Met
M0090170 HBOALHBP_00010 6933 3 Skin 0.03 protein_coding missense_variant MODERATE 387T>G Asp129Glu
M0090171 HBOALHBP_00010 7131 3 Skin 0.03 protein_coding synonymous_variant LOW 189A>G Ala63Ala
M0090172 HBOALHBP_00010 7185 4 Skin 0.04 protein_coding synonymous_variant LOW 135G>A Ser45Ser
M0090173 HBOALHBP_00010 7311 3 Skin 0.03 protein_coding synonymous_variant LOW 9T>C Val3Val
M0090174 HBOALHBP_00044 38550 7 Skin 0.07 protein_coding missense_variant MODERATE 979A>G Thr327Ala
M0090175 HBOALHBP_00044 38641 7 Skin 0.07 protein_coding missense_variant MODERATE 888C>A Asp296Glu
M0090176 HBOALHBP_00044 38767 7 Skin 0.07 protein_coding synonymous_variant LOW 762G>A Leu254Leu
M0090177 HBOALHBP_00044 39412 7 Skin 0.07 protein_coding synonymous_variant LOW 117A>G Ser39Ser
M0090178 HBOALHBP_00045 40495 6 Skin 0.06 protein_coding missense_variant MODERATE 712A>C Ile238Leu
M0090179 HBOALHBP_00045 40728 4 Skin 0.04 protein_coding synonymous_variant LOW 945C>T His315His
M0090180 HBOALHBP_00045 40824 5 Skin 0.05 protein_coding synonymous_variant LOW 1041C>T Ile347Ile
M0090181 HBOALHBP_00045 40837 6 Skin 0.06 protein_coding missense_variant MODERATE 1054A>G Thr352Ala
M0090182 HBOALHBP_00045 40909 5 Skin 0.05 protein_coding missense_variant MODERATE 1126A>G Lys376Glu
M0090183 HBOALHBP_00045 40910 5 Skin 0.05 protein_coding missense_variant MODERATE 1127A>C Lys376Thr
M0090184 HBOALHBP_00045 40946 4 Skin 0.04 protein_coding missense_variant MODERATE 1163G>A Arg388Lys
M0090185 HBOALHBP_00045 40973 4 Skin 0.04 protein_coding missense_variant MODERATE 1190A>C His397Pro
M0090186 HBOALHBP_00045 40974 5 Skin 0.05 protein_coding missense_variant MODERATE 1191C>A His397Gln
M0090187 HBOALHBP_00045 41162 4 Skin 0.04 protein_coding missense_variant MODERATE 1379C>G Thr460Arg
M0090188 HBOALHBP_00045 41434 6 Skin 0.06 protein_coding missense_variant MODERATE 1651G>C Asp551His
M0090189 HBOALHBP_00045 41467 6 Skin 0.06 protein_coding missense_variant MODERATE 1684A>G Asn562Asp
M0090190 HBOALHBP_00045 41877 5 Skin 0.05 protein_coding synonymous_variant LOW 2094T>C Asn698Asn
M0090191 HBOALHBP_00043 41971 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3749T>G None
M0090192 HBOALHBP_00043 42021 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3799C>G None
M0090193 HBOALHBP_00043 42024 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -3802G>A None
M0090194 HBOALHBP_00043 42071 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3849G>T None
M0090195 HBOALHBP_00046 42186 5 Skin 0.05 protein_coding missense_variant MODERATE 79A>C Ile27Leu
M0090196 HBOALHBP_00046 42257 5 Skin 0.05 protein_coding synonymous_variant LOW 150A>G Leu50Leu
M0090197 HBOALHBP_00046 42386 5 Skin 0.05 protein_coding synonymous_variant LOW 279G>A Val93Val
M0090198 HBOALHBP_00046 42398 6 Skin 0.06 protein_coding synonymous_variant LOW 291C>T Ser97Ser
M0090199 HBOALHBP_00046 42408 6 Skin 0.06 protein_coding missense_variant MODERATE 301C>A Gln101Lys
M0090200 HBOALHBP_00046 42512 4 Skin 0.04 protein_coding synonymous_variant LOW 405C>T Ile135Ile
M0090201 HBOALHBP_00046 42572 5 Skin 0.05 protein_coding synonymous_variant LOW 465T>C Asp155Asp
M0090202 HBOALHBP_00047 43279 3 Skin 0.03 protein_coding synonymous_variant LOW 396C>T Tyr132Tyr
M0090203 HBOALHBP_00037 27131 3 Skin 0.03 protein_coding synonymous_variant LOW 138T>C Tyr46Tyr
M0090204 HBOALHBP_00037 27143 3 Skin 0.03 protein_coding synonymous_variant LOW 126C>T Asp42Asp
M0090205 HBOALHBP_00038 27767 3 Skin 0.03 protein_coding missense_variant MODERATE 398T>C Val133Ala
M0090206 HBOALHBP_00038 27850 3 Skin 0.03 protein_coding synonymous_variant LOW 315T>C His105His
M0090207 HBOALHBP_00038 28020 3 Skin 0.03 protein_coding missense_variant MODERATE 145G>T Asp49Tyr
M0090208 HBOALHBP_00038 28135 3 Skin 0.03 protein_coding synonymous_variant LOW 30T>C Asn10Asn
M0090209 HBOALHBP_00039 28170 3 Skin 0.03 protein_coding missense_variant MODERATE 1535A>G Asn512Ser
M0090210 HBOALHBP_00039 28220 3 Skin 0.03 protein_coding synonymous_variant LOW 1485T>C Asn495Asn
M0090211 HBOALHBP_00039 28229 3 Skin 0.03 protein_coding missense_variant MODERATE 1476G>A Met492Ile
M0090212 HBOALHBP_00039 28895 3 Skin 0.03 protein_coding synonymous_variant LOW 810T>C Gly270Gly
M0090213 HBOALHBP_00039 29618 3 Skin 0.03 protein_coding synonymous_variant LOW 87C>T Val29Val
M0090214 HBOALHBP_00039 29675 3 Skin 0.03 protein_coding synonymous_variant LOW 30A>G Val10Val
M0090215 HBOALHBP_00034 29802 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4960T>C None
M0090216 HBOALHBP_00035 29932 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3965T>G None
M0090217 HBOALHBP_00035 29942 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3975C>A None
M0090218 HBOALHBP_00035 29964 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -3997C>G None
M0090219 HBOALHBP_00035 29987 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4020C>A None
M0090220 HBOALHBP_00040 31848 3 Skin 0.03 protein_coding missense_variant MODERATE 1924G>A Ala642Thr
M0090221 HBOALHBP_00040 33051 3 Skin 0.03 protein_coding missense_variant MODERATE 721G>T Ala241Ser
M0090222 HBOALHBP_00040 33080 3 Skin 0.03 protein_coding missense_variant MODERATE 692C>T Thr231Ile
M0090223 HBOALHBP_00040 33081 3 Skin 0.03 protein_coding missense_variant MODERATE 691A>G Thr231Ala
M0090224 HBOALHBP_00040 33133 3 Skin 0.03 protein_coding synonymous_variant LOW 639A>G Val213Val
M0090225 HBOALHBP_00040 33259 3 Skin 0.03 protein_coding synonymous_variant LOW 513T>C Ala171Ala
M0090226 HBOALHBP_00057 52528 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2552T>C None
M0090227 HBOALHBP_00018 12977 3 Skin 0.03 protein_coding synonymous_variant LOW 447T>C Ile149Ile
M0090228 HBOALHBP_00018 13049 3 Skin 0.03 protein_coding synonymous_variant LOW 375T>C Tyr125Tyr
M0090229 HBOALHBP_00022 15207 3 Skin 0.03 protein_coding missense_variant MODERATE 157A>C Asn53His
M0090230 HBOALHBP_00003 5929 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2666G>T None
M0090231 HBOALHBP_00015 12853 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -800A>G None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
HBOALHBP_00039 PHI:10513 narH 73.5 1.1e-233 1 511 0.9980 0.9941 rodents urinary tract infection respiratory nitrate reductase 1 beta chain reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
HBOALHBP_00039 5.A.3.1.1 73.5 2.5e-233 1 511 0.9980 2.2622 5 Transmembrane Electron Carriers 5.A Transmembrane 2-electron transfer carriers 5.A.3 The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family