Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C497
  Reference Plasmid   NZ_CP024184.1
  Reference Plasmid Size   59088
  Reference Plasmid GC Content   0.38
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0090232 JDOJADAF_00058 50707 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -565A>G None
M0090233 JDOJADAF_00058 50708 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -566T>G None
M0090234 JDOJADAF_00058 50710 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -568G>A None
M0090235 JDOJADAF_00058 50711 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -569G>A None
M0090236 JDOJADAF_00058 50713 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -571G>T None
M0090237 JDOJADAF_00058 50717 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -575T>C None
M0090238 JDOJADAF_00058 50720 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -578A>G None
M0090239 JDOJADAF_00058 50723 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -581C>T None
M0090240 JDOJADAF_00058 50726 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -584T>G None
M0090241 JDOJADAF_00058 50802 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -660G>T None
M0090242 JDOJADAF_00060 50975 6 Skin 0.07 protein_coding missense_variant MODERATE 440T>C Val147Ala
M0090243 JDOJADAF_00060 51226 6 Skin 0.07 protein_coding synonymous_variant LOW 189C>T Leu63Leu
M0090244 JDOJADAF_00061 51645 6 Skin 0.07 protein_coding synonymous_variant LOW 75A>G Ala25Ala
M0090245 JDOJADAF_00029 24903 11 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -1639A>G None
M0090246 JDOJADAF_00029 24928 11 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -1664A>G None
M0090247 JDOJADAF_00029 24958 16 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -1694T>C None
M0090248 JDOJADAF_00029 25066 19 Skin 0.22 protein_coding upstream_gene_variant MODIFIER -1802A>G None
M0090249 JDOJADAF_00033 25188 9 Skin 0.11 protein_coding synonymous_variant LOW 120G>C Leu40Leu
M0090250 JDOJADAF_00033 25395 19 Skin 0.22 protein_coding synonymous_variant LOW 327A>G Val109Val
M0090251 JDOJADAF_00033 25398 20 Skin 0.24 protein_coding synonymous_variant LOW 330G>A Val110Val
M0090252 JDOJADAF_00033 25418 20 Skin 0.24 protein_coding missense_variant MODERATE 350C>G Ala117Gly
M0090253 JDOJADAF_00033 25420 5 Skin 0.06 protein_coding synonymous_variant LOW 352T>C Leu118Leu
M0090254 JDOJADAF_00033 25557 16 Skin 0.19 protein_coding synonymous_variant LOW 489C>T Leu163Leu
M0090255 JDOJADAF_00033 25563 14 Skin 0.16 protein_coding synonymous_variant LOW 495G>C Thr165Thr
M0090256 JDOJADAF_00033 25566 19 Skin 0.22 protein_coding synonymous_variant LOW 498G>A Val166Val
M0090257 JDOJADAF_00033 25572 19 Skin 0.22 protein_coding synonymous_variant LOW 504A>G Ser168Ser
M0090258 JDOJADAF_00033 25584 19 Skin 0.22 protein_coding synonymous_variant LOW 516G>A Leu172Leu
M0090259 JDOJADAF_00033 25605 3 Skin 0.04 protein_coding synonymous_variant LOW 537G>A Val179Val
M0090260 JDOJADAF_00033 26046 23 Skin 0.27 protein_coding synonymous_variant LOW 978T>C Ala326Ala
M0090261 JDOJADAF_00033 26067 24 Skin 0.28 protein_coding synonymous_variant LOW 999A>G Leu333Leu
M0090262 JDOJADAF_00033 26133 7 Skin 0.08 protein_coding synonymous_variant LOW 1065A>G Lys355Lys
M0090263 JDOJADAF_00033 26136 7 Skin 0.08 protein_coding synonymous_variant LOW 1068A>G Val356Val
M0090264 JDOJADAF_00033 26208 19 Skin 0.22 protein_coding synonymous_variant LOW 1140G>A Arg380Arg
M0090265 JDOJADAF_00033 26266 21 Skin 0.25 protein_coding synonymous_variant LOW 1198T>C Leu400Leu
M0090266 JDOJADAF_00033 26268 22 Skin 0.26 protein_coding synonymous_variant LOW 1200G>A Leu400Leu
M0090267 JDOJADAF_00033 26299 3 Skin 0.04 protein_coding missense_variant MODERATE 1231G>A Ala411Thr
M0090268 JDOJADAF_00033 26319 9 Skin 0.11 protein_coding synonymous_variant LOW 1251A>T Leu417Leu
M0090269 JDOJADAF_00034 26354 3 Skin 0.04 protein_coding missense_variant MODERATE 22T>C Phe8Leu
M0090270 JDOJADAF_00034 26821 18 Skin 0.21 protein_coding synonymous_variant LOW 489A>C Gly163Gly
M0090271 JDOJADAF_00034 27012 9 Skin 0.11 protein_coding missense_variant MODERATE 680A>G Gln227Arg
M0090272 JDOJADAF_00034 27100 17 Skin 0.20 protein_coding synonymous_variant LOW 768T>C Ser256Ser
M0090273 JDOJADAF_00034 27200 6 Skin 0.07 protein_coding missense_variant MODERATE 868A>G Lys290Glu
M0090274 JDOJADAF_00034 27282 3 Skin 0.04 protein_coding missense_variant MODERATE 950A>C Asp317Ala
M0090275 JDOJADAF_00035 27440 14 Skin 0.16 protein_coding synonymous_variant LOW 117T>G Val39Val
M0090276 JDOJADAF_00035 27914 6 Skin 0.07 protein_coding synonymous_variant LOW 591G>C Ala197Ala
M0090277 JDOJADAF_00035 27935 9 Skin 0.11 protein_coding synonymous_variant LOW 612G>A Leu204Leu
M0090278 JDOJADAF_00035 27938 9 Skin 0.11 protein_coding synonymous_variant LOW 615T>G Val205Val
M0090279 JDOJADAF_00035 27947 3 Skin 0.04 protein_coding synonymous_variant LOW 624G>C Leu208Leu
M0090280 JDOJADAF_00035 27971 8 Skin 0.09 protein_coding synonymous_variant LOW 648C>A Ala216Ala
M0090281 JDOJADAF_00035 27974 5 Skin 0.06 protein_coding synonymous_variant LOW 651A>G Leu217Leu
M0090282 JDOJADAF_00035 27976 8 Skin 0.09 protein_coding missense_variant MODERATE 653G>C Gly218Ala
M0090283 JDOJADAF_00035 27983 5 Skin 0.06 protein_coding synonymous_variant LOW 660C>T Ile220Ile
M0090284 JDOJADAF_00035 27989 8 Skin 0.09 protein_coding synonymous_variant LOW 666C>G Ala222Ala
M0090285 JDOJADAF_00035 27992 8 Skin 0.09 protein_coding synonymous_variant LOW 669A>T Arg223Arg
M0090286 JDOJADAF_00035 27998 8 Skin 0.09 protein_coding synonymous_variant LOW 675T>C Ala225Ala
M0090287 JDOJADAF_00035 28001 8 Skin 0.09 protein_coding synonymous_variant LOW 678G>A Leu226Leu
M0090288 JDOJADAF_00035 28046 10 Skin 0.12 protein_coding synonymous_variant LOW 723T>A Ile241Ile
M0090289 JDOJADAF_00035 28051 4 Skin 0.05 protein_coding missense_variant MODERATE 728C>T Ala243Val
M0090290 JDOJADAF_00035 28067 7 Skin 0.08 protein_coding synonymous_variant LOW 744A>G Leu248Leu
M0090291 JDOJADAF_00035 28070 7 Skin 0.08 protein_coding synonymous_variant LOW 747C>T Gly249Gly
M0090292 JDOJADAF_00035 28072 7 Skin 0.08 protein_coding missense_variant MODERATE 749T>G Leu250Trp
M0090293 JDOJADAF_00035 28139 4 Skin 0.05 protein_coding synonymous_variant LOW 816G>A Val272Val
M0090294 JDOJADAF_00035 28169 6 Skin 0.07 protein_coding synonymous_variant LOW 846C>T Gly282Gly
M0090295 JDOJADAF_00035 28180 6 Skin 0.07 protein_coding missense_variant MODERATE 857T>C Met286Thr
M0090296 JDOJADAF_00035 28194 7 Skin 0.08 protein_coding synonymous_variant LOW 871C>T Leu291Leu
M0090297 JDOJADAF_00035 28199 7 Skin 0.08 protein_coding synonymous_variant LOW 876G>T Ser292Ser
M0090298 JDOJADAF_00035 28202 7 Skin 0.08 protein_coding synonymous_variant LOW 879G>T Val293Val
M0090299 JDOJADAF_00035 28205 7 Skin 0.08 protein_coding synonymous_variant LOW 882A>C Ala294Ala
M0090300 JDOJADAF_00035 28211 8 Skin 0.09 protein_coding synonymous_variant LOW 888T>A Val296Val
M0090301 JDOJADAF_00035 28214 8 Skin 0.09 protein_coding synonymous_variant LOW 891G>A Gly297Gly
M0090302 JDOJADAF_00035 28226 8 Skin 0.09 protein_coding synonymous_variant LOW 903G>A Ala301Ala
M0090303 JDOJADAF_00035 28439 4 Skin 0.05 protein_coding synonymous_variant LOW 1116A>G Leu372Leu
M0090304 JDOJADAF_00033 25221 11 Skin 0.13 protein_coding synonymous_variant LOW 153A>G Gly51Gly
M0090305 JDOJADAF_00033 25773 13 Skin 0.15 protein_coding synonymous_variant LOW 705G>A Glu235Glu
M0090306 JDOJADAF_00033 25797 17 Skin 0.20 protein_coding synonymous_variant LOW 729A>G Val243Val
M0090307 JDOJADAF_00033 25866 22 Skin 0.26 protein_coding synonymous_variant LOW 798G>A Leu266Leu
M0090308 JDOJADAF_00033 25959 7 Skin 0.08 protein_coding synonymous_variant LOW 891T>C Asn297Asn
M0090309 JDOJADAF_00033 26190 16 Skin 0.19 protein_coding synonymous_variant LOW 1122G>A Leu374Leu
M0090310 JDOJADAF_00034 26926 13 Skin 0.15 protein_coding synonymous_variant LOW 594T>C Thr198Thr
M0090311 JDOJADAF_00034 27115 4 Skin 0.05 protein_coding synonymous_variant LOW 783G>A Val261Val
M0090312 JDOJADAF_00035 28863 4 Skin 0.05 protein_coding missense_variant MODERATE 1540A>C Ile514Leu
M0090313 JDOJADAF_00033 26001 7 Skin 0.08 protein_coding synonymous_variant LOW 933G>C Val311Val
M0090314 JDOJADAF_00033 26031 5 Skin 0.06 protein_coding synonymous_variant LOW 963G>A Ala321Ala
M0090315 JDOJADAF_00029 26330 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3066T>C None
M0090316 JDOJADAF_00034 26352 5 Skin 0.06 protein_coding missense_variant MODERATE 20C>T Ser7Phe
M0090317 JDOJADAF_00034 26372 10 Skin 0.12 protein_coding missense_variant MODERATE 40A>G Thr14Ala
M0090318 JDOJADAF_00034 26407 8 Skin 0.09 protein_coding synonymous_variant LOW 75A>G Leu25Leu
M0090319 JDOJADAF_00034 26416 10 Skin 0.12 protein_coding synonymous_variant LOW 84A>G Lys28Lys
M0090320 JDOJADAF_00034 26923 5 Skin 0.06 protein_coding synonymous_variant LOW 591T>C Ser197Ser
M0090321 JDOJADAF_00034 27046 5 Skin 0.06 protein_coding synonymous_variant LOW 714G>A Thr238Thr
M0090322 JDOJADAF_00034 27227 6 Skin 0.07 protein_coding missense_variant MODERATE 895G>A Val299Ile
M0090323 JDOJADAF_00035 27972 3 Skin 0.04 protein_coding synonymous_variant LOW 649T>C Leu217Leu
M0090324 JDOJADAF_00035 27977 4 Skin 0.05 protein_coding synonymous_variant LOW 654T>C Gly218Gly
M0090325 JDOJADAF_00040 31421 3 Skin 0.04 protein_coding synonymous_variant LOW 186G>A Arg62Arg
M0090326 JDOJADAF_00058 49668 6 Skin 0.07 protein_coding missense_variant MODERATE 475T>C Tyr159His
M0090327 JDOJADAF_00058 49841 6 Skin 0.07 protein_coding missense_variant MODERATE 302A>G Glu101Gly
M0090328 JDOJADAF_00060 50967 5 Skin 0.06 protein_coding missense_variant MODERATE 448A>G Ile150Val
M0090329 JDOJADAF_00060 51019 5 Skin 0.06 protein_coding synonymous_variant LOW 396C>T Gly132Gly
M0090330 JDOJADAF_00060 51031 6 Skin 0.07 protein_coding synonymous_variant LOW 384A>G Lys128Lys
M0090331 JDOJADAF_00060 51067 5 Skin 0.06 protein_coding missense_variant MODERATE 348T>G Ile116Met
M0090332 JDOJADAF_00060 51106 5 Skin 0.06 protein_coding synonymous_variant LOW 309G>C Gly103Gly
M0090333 JDOJADAF_00058 51444 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1302C>T None
M0090334 JDOJADAF_00058 51505 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1363T>C None
M0090335 JDOJADAF_00061 51687 5 Skin 0.06 protein_coding synonymous_variant LOW 117T>C Val39Val
M0090336 JDOJADAF_00061 51717 5 Skin 0.06 protein_coding synonymous_variant LOW 147T>C Thr49Thr
M0090337 JDOJADAF_00061 51729 5 Skin 0.06 protein_coding synonymous_variant LOW 159C>G Arg53Arg
M0090338 JDOJADAF_00061 51744 5 Skin 0.06 protein_coding synonymous_variant LOW 174A>G Glu58Glu
M0090339 JDOJADAF_00061 51750 5 Skin 0.06 protein_coding synonymous_variant LOW 180C>T Ile60Ile
M0090340 JDOJADAF_00058 51877 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -1735T>A None
M0090341 JDOJADAF_00062 51897 5 Skin 0.06 protein_coding synonymous_variant LOW 2538A>G Arg846Arg
M0090342 JDOJADAF_00062 51901 5 Skin 0.06 protein_coding missense_variant MODERATE 2534G>A Ser845Asn
M0090343 JDOJADAF_00062 51909 5 Skin 0.06 protein_coding missense_variant MODERATE 2526G>T Gln842His
M0090344 JDOJADAF_00062 51911 5 Skin 0.06 protein_coding stop_gained HIGH 2524C>T Gln842*
M0090345 JDOJADAF_00062 51912 5 Skin 0.06 protein_coding synonymous_variant LOW 2523G>A Arg841Arg
M0090346 JDOJADAF_00062 51930 5 Skin 0.06 protein_coding synonymous_variant LOW 2505C>T Ser835Ser
M0090347 JDOJADAF_00062 51943 5 Skin 0.06 protein_coding missense_variant MODERATE 2492A>C Gln831Pro
M0090348 JDOJADAF_00062 51944 5 Skin 0.06 protein_coding missense_variant MODERATE 2491C>G Gln831Glu
M0090349 JDOJADAF_00062 51946 5 Skin 0.06 protein_coding missense_variant MODERATE 2489G>A Gly830Glu
M0090350 JDOJADAF_00062 51980 5 Skin 0.06 protein_coding missense_variant MODERATE 2455G>A Ala819Thr
M0090351 JDOJADAF_00062 51999 5 Skin 0.06 protein_coding synonymous_variant LOW 2436T>C Pro812Pro
M0090352 JDOJADAF_00062 52010 5 Skin 0.06 protein_coding missense_variant MODERATE 2425C>A His809Asn
M0090353 JDOJADAF_00062 52035 5 Skin 0.06 protein_coding synonymous_variant LOW 2400A>G Thr800Thr
M0090354 JDOJADAF_00062 52067 5 Skin 0.06 protein_coding missense_variant MODERATE 2368A>G Thr790Ala
M0090355 JDOJADAF_00062 52089 5 Skin 0.06 protein_coding synonymous_variant LOW 2346G>A Lys782Lys
M0090356 JDOJADAF_00062 52104 5 Skin 0.06 protein_coding synonymous_variant LOW 2331A>G Leu777Leu
M0090357 JDOJADAF_00062 52295 5 Skin 0.06 protein_coding missense_variant MODERATE 2140A>G Asn714Asp
M0090358 JDOJADAF_00062 52337 5 Skin 0.06 protein_coding missense_variant MODERATE 2098C>G Pro700Ala
M0090359 JDOJADAF_00062 52344 5 Skin 0.06 protein_coding synonymous_variant LOW 2091T>C His697His
M0090360 JDOJADAF_00062 52365 5 Skin 0.06 protein_coding synonymous_variant LOW 2070G>A Glu690Glu
M0090361 JDOJADAF_00062 52366 5 Skin 0.06 protein_coding missense_variant MODERATE 2069A>G Glu690Gly
M0090362 JDOJADAF_00062 52560 5 Skin 0.06 protein_coding synonymous_variant LOW 1875G>A Glu625Glu
M0090363 JDOJADAF_00062 52562 5 Skin 0.06 protein_coding missense_variant MODERATE 1873G>A Glu625Lys
M0090364 JDOJADAF_00062 52625 5 Skin 0.06 protein_coding missense_variant MODERATE 1810A>G Thr604Ala
M0090365 JDOJADAF_00062 52696 5 Skin 0.06 protein_coding missense_variant MODERATE 1739G>A Gly580Glu
M0090366 JDOJADAF_00062 52697 5 Skin 0.06 protein_coding missense_variant MODERATE 1738G>C Gly580Arg
M0090367 JDOJADAF_00062 52739 5 Skin 0.06 protein_coding missense_variant MODERATE 1696A>G Thr566Ala
M0090368 JDOJADAF_00062 52808 5 Skin 0.06 protein_coding missense_variant MODERATE 1627G>A Ala543Thr
M0090369 JDOJADAF_00062 52813 5 Skin 0.06 protein_coding missense_variant MODERATE 1622G>A Ser541Asn
M0090370 JDOJADAF_00062 52817 5 Skin 0.06 protein_coding missense_variant MODERATE 1618C>G Pro540Ala
M0090371 JDOJADAF_00062 52867 5 Skin 0.06 protein_coding missense_variant MODERATE 1568A>G Glu523Gly
M0090372 JDOJADAF_00062 52883 5 Skin 0.06 protein_coding missense_variant MODERATE 1552G>T Asp518Tyr
M0090373 JDOJADAF_00062 52916 5 Skin 0.06 protein_coding missense_variant MODERATE 1519C>T His507Tyr
M0090374 JDOJADAF_00062 53027 5 Skin 0.06 protein_coding missense_variant MODERATE 1408C>T Pro470Ser
M0090375 JDOJADAF_00062 53036 5 Skin 0.06 protein_coding missense_variant MODERATE 1399A>G Ile467Val
M0090376 JDOJADAF_00062 53063 5 Skin 0.06 protein_coding missense_variant MODERATE 1372A>G Ile458Val
M0090377 JDOJADAF_00062 53345 5 Skin 0.06 protein_coding missense_variant MODERATE 1090A>G Asn364Asp
M0090378 JDOJADAF_00062 53348 5 Skin 0.06 protein_coding missense_variant MODERATE 1087C>T Pro363Ser
M0090379 JDOJADAF_00062 53354 5 Skin 0.06 protein_coding missense_variant MODERATE 1081A>C Ile361Leu
M0090380 JDOJADAF_00062 53379 5 Skin 0.06 protein_coding missense_variant MODERATE 1056A>C Glu352Asp
M0090381 JDOJADAF_00062 53414 5 Skin 0.06 protein_coding missense_variant MODERATE 1021C>A Pro341Thr
M0090382 JDOJADAF_00062 53447 5 Skin 0.06 protein_coding missense_variant MODERATE 988G>A Glu330Lys
M0090383 JDOJADAF_00062 53471 5 Skin 0.06 protein_coding missense_variant MODERATE 964A>G Lys322Glu
M0090384 JDOJADAF_00062 53529 5 Skin 0.06 protein_coding synonymous_variant LOW 906G>A Lys302Lys
M0090385 JDOJADAF_00062 53530 5 Skin 0.06 protein_coding missense_variant MODERATE 905A>G Lys302Arg
M0090386 JDOJADAF_00062 53676 5 Skin 0.06 protein_coding synonymous_variant LOW 759A>T Pro253Pro
M0090387 JDOJADAF_00062 53707 5 Skin 0.06 protein_coding missense_variant MODERATE 728A>G Lys243Arg
M0090388 JDOJADAF_00062 53718 5 Skin 0.06 protein_coding synonymous_variant LOW 717C>T Thr239Thr
M0090389 JDOJADAF_00062 53730 5 Skin 0.06 protein_coding synonymous_variant LOW 705G>A Val235Val
M0090390 JDOJADAF_00062 53738 5 Skin 0.06 protein_coding missense_variant MODERATE 697A>G Ser233Gly
M0090391 JDOJADAF_00062 53775 5 Skin 0.06 protein_coding missense_variant MODERATE 660T>G Asp220Glu
M0090392 JDOJADAF_00062 53833 5 Skin 0.06 protein_coding missense_variant MODERATE 602G>A Arg201Gln
M0090393 JDOJADAF_00062 53847 5 Skin 0.06 protein_coding synonymous_variant LOW 588T>A Thr196Thr
M0090394 JDOJADAF_00062 53862 5 Skin 0.06 protein_coding synonymous_variant LOW 573C>A Val191Val
M0090395 JDOJADAF_00062 53878 5 Skin 0.06 protein_coding missense_variant MODERATE 557G>A Arg186Lys
M0090396 JDOJADAF_00062 53949 5 Skin 0.06 protein_coding synonymous_variant LOW 486T>C Pro162Pro
M0090397 JDOJADAF_00062 53952 5 Skin 0.06 protein_coding synonymous_variant LOW 483C>T Asp161Asp
M0090398 JDOJADAF_00062 54004 5 Skin 0.06 protein_coding missense_variant MODERATE 431A>G Lys144Arg
M0090399 JDOJADAF_00062 54008 5 Skin 0.06 protein_coding synonymous_variant LOW 427T>C Leu143Leu
M0090400 JDOJADAF_00062 54015 5 Skin 0.06 protein_coding missense_variant MODERATE 420T>G Asn140Lys
M0090401 JDOJADAF_00062 54017 5 Skin 0.06 protein_coding missense_variant MODERATE 418A>G Asn140Asp
M0090402 JDOJADAF_00062 54027 5 Skin 0.06 protein_coding synonymous_variant LOW 408A>G Val136Val
M0090403 JDOJADAF_00062 54045 5 Skin 0.06 protein_coding synonymous_variant LOW 390C>T Ser130Ser
M0090404 JDOJADAF_00062 54087 5 Skin 0.06 protein_coding synonymous_variant LOW 348C>T Arg116Arg
M0090405 JDOJADAF_00062 54126 5 Skin 0.06 protein_coding synonymous_variant LOW 309G>A Glu103Glu
M0090406 JDOJADAF_00062 54129 5 Skin 0.06 protein_coding synonymous_variant LOW 306G>A Gly102Gly
M0090407 JDOJADAF_00062 54150 5 Skin 0.06 protein_coding synonymous_variant LOW 285A>G Leu95Leu
M0090408 JDOJADAF_00062 54189 5 Skin 0.06 protein_coding synonymous_variant LOW 246C>A Ala82Ala
M0090409 JDOJADAF_00062 54198 5 Skin 0.06 protein_coding synonymous_variant LOW 237C>T Ile79Ile
M0090410 JDOJADAF_00062 54258 5 Skin 0.06 protein_coding synonymous_variant LOW 177T>C Gly59Gly
M0090411 JDOJADAF_00062 54279 5 Skin 0.06 protein_coding missense_variant MODERATE 156A>T Glu52Asp
M0090412 JDOJADAF_00062 54282 5 Skin 0.06 protein_coding synonymous_variant LOW 153T>G Val51Val
M0090413 JDOJADAF_00062 54285 5 Skin 0.06 protein_coding synonymous_variant LOW 150A>G Glu50Glu
M0090414 JDOJADAF_00062 54305 5 Skin 0.06 protein_coding synonymous_variant LOW 130A>C Arg44Arg
M0090415 JDOJADAF_00062 54344 5 Skin 0.06 protein_coding missense_variant MODERATE 91G>T Val31Phe
M0090416 JDOJADAF_00062 54369 6 Skin 0.07 protein_coding synonymous_variant LOW 66C>T Gly22Gly
M0090417 JDOJADAF_00063 54488 6 Skin 0.07 protein_coding synonymous_variant LOW 408G>A Val136Val
M0090418 JDOJADAF_00063 54500 6 Skin 0.07 protein_coding synonymous_variant LOW 396C>T Ser132Ser
M0090419 JDOJADAF_00063 54516 5 Skin 0.06 protein_coding missense_variant MODERATE 380T>C Leu127Ser
M0090420 JDOJADAF_00063 54517 6 Skin 0.07 protein_coding missense_variant MODERATE 379T>G Leu127Val
M0090421 JDOJADAF_00063 54528 6 Skin 0.07 protein_coding missense_variant MODERATE 368T>C Leu123Ser
M0090422 JDOJADAF_00063 54590 5 Skin 0.06 protein_coding synonymous_variant LOW 306G>A Ser102Ser
M0090423 JDOJADAF_00063 54601 6 Skin 0.07 protein_coding synonymous_variant LOW 295C>T Leu99Leu
M0090424 JDOJADAF_00063 54608 5 Skin 0.06 protein_coding synonymous_variant LOW 288A>G Leu96Leu
M0090425 JDOJADAF_00063 54671 5 Skin 0.06 protein_coding synonymous_variant LOW 225T>C Gly75Gly
M0090426 JDOJADAF_00063 54728 6 Skin 0.07 protein_coding synonymous_variant LOW 168T>C Arg56Arg
M0090427 JDOJADAF_00063 54776 5 Skin 0.06 protein_coding synonymous_variant LOW 120G>A Ala40Ala
M0090428 JDOJADAF_00063 54782 5 Skin 0.06 protein_coding synonymous_variant LOW 114A>G Pro38Pro
M0090429 JDOJADAF_00063 54820 5 Skin 0.06 protein_coding missense_variant MODERATE 76G>A Ala26Thr
M0090430 JDOJADAF_00063 54877 5 Skin 0.06 protein_coding missense_variant MODERATE 19G>T Val7Phe
M0090431 JDOJADAF_00058 54921 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4779T>C None
M0090432 JDOJADAF_00058 54945 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4803A>G None
M0090433 JDOJADAF_00058 54966 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4824C>T None
M0090434 JDOJADAF_00058 54968 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4826A>C None
M0090435 JDOJADAF_00058 54971 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4829C>T None
M0090436 JDOJADAF_00058 54972 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4830A>G None
M0090437 JDOJADAF_00058 54981 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4839T>A None
M0090438 JDOJADAF_00058 54986 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4844C>T None
M0090439 JDOJADAF_00058 55014 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4872G>T None
M0090440 JDOJADAF_00058 55015 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4873C>T None
M0090441 JDOJADAF_00058 55025 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4883G>A None
M0090442 JDOJADAF_00058 55027 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4885C>T None
M0090443 JDOJADAF_00058 55028 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4886A>C None
M0090444 JDOJADAF_00058 55029 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4887G>C None
M0090445 JDOJADAF_00058 55037 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4895T>C None
M0090446 JDOJADAF_00058 55064 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4922C>T None
M0090447 JDOJADAF_00058 55065 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4923T>A None
M0090448 JDOJADAF_00058 55108 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4966T>C None
M0090449 JDOJADAF_00058 55121 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4979A>C None
M0090450 JDOJADAF_00059 55143 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4445T>C None
M0090451 JDOJADAF_00064 55227 5 Skin 0.06 protein_coding missense_variant MODERATE 80G>A Ser27Asn
M0090452 JDOJADAF_00064 55240 5 Skin 0.06 protein_coding synonymous_variant LOW 93A>G Gln31Gln
M0090453 JDOJADAF_00064 55249 5 Skin 0.06 protein_coding synonymous_variant LOW 102G>A Leu34Leu
M0090454 JDOJADAF_00064 55251 5 Skin 0.06 protein_coding missense_variant MODERATE 104T>C Ile35Thr
M0090455 JDOJADAF_00064 55256 5 Skin 0.06 protein_coding missense_variant MODERATE 109G>C Glu37Gln
M0090456 JDOJADAF_00064 55279 5 Skin 0.06 protein_coding missense_variant MODERATE 132G>T Glu44Asp
M0090457 JDOJADAF_00064 55329 5 Skin 0.06 protein_coding missense_variant MODERATE 182T>C Val61Ala
M0090458 JDOJADAF_00064 55333 5 Skin 0.06 protein_coding synonymous_variant LOW 186G>C Ala62Ala
M0090459 JDOJADAF_00064 55342 5 Skin 0.06 protein_coding synonymous_variant LOW 195C>T Ser65Ser
M0090460 JDOJADAF_00064 55374 5 Skin 0.06 protein_coding missense_variant MODERATE 227G>A Arg76Lys
M0090461 JDOJADAF_00064 55417 4 Skin 0.05 protein_coding synonymous_variant LOW 270C>T Arg90Arg
M0090462 JDOJADAF_00064 55429 4 Skin 0.05 protein_coding synonymous_variant LOW 282A>T Val94Val
M0090463 JDOJADAF_00064 55435 4 Skin 0.05 protein_coding synonymous_variant LOW 288G>A Leu96Leu
M0090464 JDOJADAF_00064 55438 4 Skin 0.05 protein_coding synonymous_variant LOW 291A>G Ser97Ser
M0090465 JDOJADAF_00064 55441 4 Skin 0.05 protein_coding synonymous_variant LOW 294A>G Ala98Ala
M0090466 JDOJADAF_00064 55526 4 Skin 0.05 protein_coding missense_variant MODERATE 379G>C Glu127Gln
M0090467 JDOJADAF_00064 55528 4 Skin 0.05 protein_coding missense_variant MODERATE 381G>T Glu127Asp
M0090468 JDOJADAF_00068 57480 3 Skin 0.04 protein_coding missense_variant MODERATE 1064G>A Ser355Asn
M0090469 JDOJADAF_00068 57497 3 Skin 0.04 protein_coding synonymous_variant LOW 1047A>G Val349Val
M0090470 JDOJADAF_00068 57548 3 Skin 0.04 protein_coding synonymous_variant LOW 996G>A Ser332Ser
M0090471 JDOJADAF_00068 57566 3 Skin 0.04 protein_coding synonymous_variant LOW 978A>G Ala326Ala
M0090472 JDOJADAF_00068 57569 3 Skin 0.04 protein_coding synonymous_variant LOW 975A>G Lys325Lys
M0090473 JDOJADAF_00068 57584 3 Skin 0.04 protein_coding synonymous_variant LOW 960G>A Arg320Arg
M0090474 JDOJADAF_00068 57637 3 Skin 0.04 protein_coding synonymous_variant LOW 907C>A Arg303Arg
M0090475 JDOJADAF_00068 57785 3 Skin 0.04 protein_coding synonymous_variant LOW 759C>A Leu253Leu
M0090476 JDOJADAF_00068 57797 3 Skin 0.04 protein_coding synonymous_variant LOW 747C>G Val249Val
M0090477 JDOJADAF_00068 57800 3 Skin 0.04 protein_coding synonymous_variant LOW 744G>A Glu248Glu
M0090478 JDOJADAF_00068 57857 3 Skin 0.04 protein_coding synonymous_variant LOW 687C>T Ile229Ile
M0090479 JDOJADAF_00033 25433 3 Skin 0.04 protein_coding missense_variant MODERATE 365C>T Ala122Val
M0090480 JDOJADAF_00033 26052 3 Skin 0.04 protein_coding synonymous_variant LOW 984T>G Gly328Gly
M0090481 JDOJADAF_00056 46949 4 Skin 0.05 protein_coding synonymous_variant LOW 21C>T Ile7Ile
M0090482 JDOJADAF_00056 46970 4 Skin 0.05 protein_coding synonymous_variant LOW 42G>A Leu14Leu
M0090483 JDOJADAF_00056 47006 4 Skin 0.05 protein_coding synonymous_variant LOW 78A>G Gly26Gly
M0090484 JDOJADAF_00056 47012 4 Skin 0.05 protein_coding synonymous_variant LOW 84G>A Ser28Ser
M0090485 JDOJADAF_00056 47015 4 Skin 0.05 protein_coding synonymous_variant LOW 87T>C Ala29Ala
M0090486 JDOJADAF_00056 47024 4 Skin 0.05 protein_coding synonymous_variant LOW 96A>G Gly32Gly
M0090487 JDOJADAF_00056 47038 4 Skin 0.05 protein_coding missense_variant MODERATE 110A>G Lys37Arg
M0090488 JDOJADAF_00056 47057 4 Skin 0.05 protein_coding synonymous_variant LOW 129A>G Leu43Leu
M0090489 JDOJADAF_00056 47066 4 Skin 0.05 protein_coding synonymous_variant LOW 138A>G Glu46Glu
M0090490 JDOJADAF_00056 47072 4 Skin 0.05 protein_coding missense_variant MODERATE 144T>G Asp48Glu
M0090491 JDOJADAF_00056 47073 4 Skin 0.05 protein_coding synonymous_variant LOW 145T>C Leu49Leu
M0090492 JDOJADAF_00056 47111 4 Skin 0.05 protein_coding synonymous_variant LOW 183A>T Ala61Ala
M0090493 JDOJADAF_00056 47120 4 Skin 0.05 protein_coding synonymous_variant LOW 192T>C Tyr64Tyr
M0090494 JDOJADAF_00056 47123 4 Skin 0.05 protein_coding synonymous_variant LOW 195T>C Ile65Ile
M0090495 JDOJADAF_00056 47623 3 Skin 0.04 protein_coding missense_variant MODERATE 695C>A Pro232Gln
M0090496 JDOJADAF_00057 48698 3 Skin 0.04 protein_coding synonymous_variant LOW 324A>G Lys108Lys
M0090497 JDOJADAF_00001 817 3 Skin 0.04 protein_coding missense_variant MODERATE 617A>G Lys206Arg
M0090498 JDOJADAF_00001 829 3 Skin 0.04 protein_coding missense_variant MODERATE 629A>T Glu210Val
M0090499 JDOJADAF_00003 1090 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -176C>T None
M0090500 JDOJADAF_00003 1108 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -158A>G None
M0090501 JDOJADAF_00003 1114 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -152G>A None
M0090502 JDOJADAF_00003 1301 4 Skin 0.05 protein_coding synonymous_variant LOW 36C>T Leu12Leu
M0090503 JDOJADAF_00003 1306 4 Skin 0.05 protein_coding missense_variant MODERATE 41A>C Lys14Thr
M0090504 JDOJADAF_00003 1500 4 Skin 0.05 protein_coding missense_variant MODERATE 235A>G Asn79Asp
M0090505 JDOJADAF_00003 1502 4 Skin 0.05 protein_coding synonymous_variant LOW 237C>T Asn79Asn
M0090506 JDOJADAF_00003 1503 4 Skin 0.05 protein_coding missense_variant MODERATE 238T>G Tyr80Asp
M0090507 JDOJADAF_00003 1532 4 Skin 0.05 protein_coding synonymous_variant LOW 267A>G Leu89Leu
M0090508 JDOJADAF_00003 1537 4 Skin 0.05 protein_coding missense_variant MODERATE 272G>C Gly91Ala
M0090509 JDOJADAF_00003 1601 3 Skin 0.04 protein_coding synonymous_variant LOW 336A>G Lys112Lys
M0090510 JDOJADAF_00003 1607 3 Skin 0.04 protein_coding synonymous_variant LOW 342T>C Arg114Arg
M0090511 JDOJADAF_00003 1614 3 Skin 0.04 protein_coding missense_variant MODERATE 349G>A Val117Ile
M0090512 JDOJADAF_00003 1622 3 Skin 0.04 protein_coding synonymous_variant LOW 357A>C Thr119Thr
M0090513 JDOJADAF_00003 1706 4 Skin 0.05 protein_coding synonymous_variant LOW 441A>G Ala147Ala
M0090514 JDOJADAF_00003 1754 4 Skin 0.05 protein_coding synonymous_variant LOW 489A>G Glu163Glu
M0090515 JDOJADAF_00003 1796 4 Skin 0.05 protein_coding synonymous_variant LOW 531A>G Leu177Leu
M0090516 JDOJADAF_00033 25809 4 Skin 0.05 protein_coding synonymous_variant LOW 741T>C Tyr247Tyr
M0090517 JDOJADAF_00033 25812 4 Skin 0.05 protein_coding synonymous_variant LOW 744G>C Ala248Ala
M0090518 JDOJADAF_00033 25824 4 Skin 0.05 protein_coding synonymous_variant LOW 756C>T His252His
M0090519 JDOJADAF_00033 25830 3 Skin 0.04 protein_coding synonymous_variant LOW 762T>C His254His
M0090520 JDOJADAF_00033 25833 3 Skin 0.04 protein_coding synonymous_variant LOW 765A>G Leu255Leu
M0090521 JDOJADAF_00033 25836 3 Skin 0.04 protein_coding synonymous_variant LOW 768A>T Ser256Ser
M0090522 JDOJADAF_00033 25842 3 Skin 0.04 protein_coding synonymous_variant LOW 774A>G Pro258Pro
M0090523 JDOJADAF_00033 25857 7 Skin 0.08 protein_coding synonymous_variant LOW 789C>T Val263Val
M0090524 JDOJADAF_00035 27406 3 Skin 0.04 protein_coding missense_variant MODERATE 83C>T Thr28Ile
M0090525 JDOJADAF_00035 27581 3 Skin 0.04 protein_coding synonymous_variant LOW 258A>G Lys86Lys
M0090526 JDOJADAF_00033 25404 6 Skin 0.07 protein_coding synonymous_variant LOW 336C>T Thr112Thr
M0090527 JDOJADAF_00033 25434 3 Skin 0.04 protein_coding synonymous_variant LOW 366C>T Ala122Ala
M0090528 JDOJADAF_00033 25440 3 Skin 0.04 protein_coding synonymous_variant LOW 372A>G Gln124Gln
M0090529 JDOJADAF_00033 25980 4 Skin 0.05 protein_coding synonymous_variant LOW 912T>C Ile304Ile
M0090530 JDOJADAF_00035 27635 3 Skin 0.04 protein_coding synonymous_variant LOW 312T>C His104His
M0090531 JDOJADAF_00047 44581 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -3982C>G None
M0090532 JDOJADAF_00053 44645 3 Skin 0.04 protein_coding missense_variant MODERATE 11A>G His4Arg
M0090533 JDOJADAF_00053 44854 3 Skin 0.04 protein_coding missense_variant MODERATE 220C>G Leu74Val
M0090534 JDOJADAF_00053 45258 3 Skin 0.04 protein_coding synonymous_variant LOW 624T>C Asn208Asn
M0090535 JDOJADAF_00053 45265 3 Skin 0.04 protein_coding missense_variant MODERATE 631T>G Phe211Val
M0090536 JDOJADAF_00053 45298 3 Skin 0.04 protein_coding missense_variant MODERATE 664G>T Val222Leu
M0090537 JDOJADAF_00053 45416 3 Skin 0.04 protein_coding missense_variant MODERATE 782A>G Asn261Ser
M0090538 JDOJADAF_00053 45429 3 Skin 0.04 protein_coding synonymous_variant LOW 795A>G Leu265Leu
M0090539 JDOJADAF_00053 45588 4 Skin 0.05 protein_coding synonymous_variant LOW 954C>T Tyr318Tyr
M0090540 JDOJADAF_00053 45698 4 Skin 0.05 protein_coding missense_variant MODERATE 1064G>A Arg355Lys
M0090541 JDOJADAF_00054 46348 4 Skin 0.05 protein_coding synonymous_variant LOW 597A>G Val199Val
M0090542 JDOJADAF_00054 46369 4 Skin 0.05 protein_coding synonymous_variant LOW 618G>A Lys206Lys
M0090543 JDOJADAF_00049 46383 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3656G>A None
M0090544 JDOJADAF_00049 46393 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3666C>A None
M0090545 JDOJADAF_00055 46416 4 Skin 0.05 protein_coding synonymous_variant LOW 21A>C Thr7Thr
M0090546 JDOJADAF_00055 46428 4 Skin 0.05 protein_coding missense_variant MODERATE 33T>A His11Gln
M0090547 JDOJADAF_00055 46431 4 Skin 0.05 protein_coding synonymous_variant LOW 36G>T Ala12Ala
M0090548 JDOJADAF_00055 46440 4 Skin 0.05 protein_coding synonymous_variant LOW 45T>C Asn15Asn
M0090549 JDOJADAF_00055 46449 4 Skin 0.05 protein_coding synonymous_variant LOW 54A>C Ala18Ala
M0090550 JDOJADAF_00055 46509 4 Skin 0.05 protein_coding synonymous_variant LOW 114C>T Ser38Ser
M0090551 JDOJADAF_00055 46540 4 Skin 0.05 protein_coding synonymous_variant LOW 145C>T Leu49Leu
M0090552 JDOJADAF_00055 46647 4 Skin 0.05 protein_coding synonymous_variant LOW 252C>T Thr84Thr
M0090553 JDOJADAF_00055 46653 4 Skin 0.05 protein_coding missense_variant MODERATE 258C>G Asp86Glu
M0090554 JDOJADAF_00055 46656 4 Skin 0.05 protein_coding synonymous_variant LOW 261A>G Thr87Thr
M0090555 JDOJADAF_00029 24288 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1024T>C None
M0090556 JDOJADAF_00032 24494 4 Skin 0.05 protein_coding synonymous_variant LOW 75A>G Glu25Glu
M0090557 JDOJADAF_00032 24509 4 Skin 0.05 protein_coding synonymous_variant LOW 60T>A Gly20Gly
M0090558 JDOJADAF_00032 24513 4 Skin 0.05 protein_coding missense_variant MODERATE 56C>T Ala19Val
M0090559 JDOJADAF_00032 24514 4 Skin 0.05 protein_coding missense_variant MODERATE 55G>C Ala19Pro
M0090560 JDOJADAF_00029 24781 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1517T>C None
M0090561 JDOJADAF_00029 24829 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1565C>A None
M0090562 JDOJADAF_00029 24845 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1581G>C None
M0090563 JDOJADAF_00033 25560 5 Skin 0.06 protein_coding synonymous_variant LOW 492C>T Asn164Asn
M0090564 JDOJADAF_00033 25821 3 Skin 0.04 protein_coding synonymous_variant LOW 753T>C Ser251Ser
M0090565 JDOJADAF_00025 17911 9 Skin 0.11 protein_coding synonymous_variant LOW 12A>G Lys4Lys
M0090566 JDOJADAF_00025 17919 4 Skin 0.05 protein_coding missense_variant MODERATE 20A>G Asn7Ser
M0090567 JDOJADAF_00025 17920 4 Skin 0.05 protein_coding synonymous_variant LOW 21T>C Asn7Asn
M0090568 JDOJADAF_00025 17924 10 Skin 0.12 protein_coding missense_variant MODERATE 25T>G Phe9Val
M0090569 JDOJADAF_00016 18060 11 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -3802T>C None
M0090570 JDOJADAF_00016 18136 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -3878A>G None
M0090571 JDOJADAF_00026 18416 3 Skin 0.04 protein_coding synonymous_variant LOW 93A>G Arg31Arg
M0090572 JDOJADAF_00026 18603 8 Skin 0.09 protein_coding missense_variant MODERATE 280C>T Pro94Ser
M0090573 JDOJADAF_00026 18614 3 Skin 0.04 protein_coding synonymous_variant LOW 291G>A Thr97Thr
M0090574 JDOJADAF_00026 18615 8 Skin 0.09 protein_coding missense_variant MODERATE 292T>G Phe98Val
M0090575 JDOJADAF_00026 18635 8 Skin 0.09 protein_coding synonymous_variant LOW 312C>T Asn104Asn
M0090576 JDOJADAF_00026 18641 8 Skin 0.09 protein_coding synonymous_variant LOW 318C>T Gly106Gly
M0090577 JDOJADAF_00026 18668 4 Skin 0.05 protein_coding synonymous_variant LOW 345G>C Gly115Gly
M0090578 JDOJADAF_00026 18677 4 Skin 0.05 protein_coding synonymous_variant LOW 354A>T Thr118Thr
M0090579 JDOJADAF_00026 18686 5 Skin 0.06 protein_coding synonymous_variant LOW 363A>T Val121Val
M0090580 JDOJADAF_00026 18709 3 Skin 0.04 protein_coding missense_variant MODERATE 386A>C Tyr129Ser
M0090581 JDOJADAF_00026 18995 5 Skin 0.06 protein_coding synonymous_variant LOW 672T>C Gly224Gly
M0090582 JDOJADAF_00026 19052 5 Skin 0.06 protein_coding synonymous_variant LOW 729A>T Gly243Gly
M0090583 JDOJADAF_00016 19234 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -4976T>C None
M0090584 JDOJADAF_00017 19346 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4862T>C None
M0090585 JDOJADAF_00017 19356 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4872A>G None
M0090586 JDOJADAF_00027 19398 4 Skin 0.05 protein_coding missense_variant MODERATE 19G>A Val7Ile
M0090587 JDOJADAF_00042 34203 3 Skin 0.04 protein_coding synonymous_variant LOW 102C>A Gly34Gly
M0090588 JDOJADAF_00042 34705 3 Skin 0.04 protein_coding missense_variant MODERATE 604T>C Tyr202His
M0090589 JDOJADAF_00043 35159 4 Skin 0.05 protein_coding synonymous_variant LOW 120G>A Lys40Lys
M0090590 JDOJADAF_00016 14074 3 Skin 0.04 protein_coding missense_variant MODERATE 185G>A Arg62Lys
M0090591 JDOJADAF_00029 24902 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1638G>T None
M0090592 JDOJADAF_00045 38513 3 Skin 0.04 protein_coding synonymous_variant LOW 624T>C Asn208Asn
M0090593 JDOJADAF_00045 38546 3 Skin 0.04 protein_coding missense_variant MODERATE 657G>T Lys219Asn
M0090594 JDOJADAF_00039 30480 3 Skin 0.04 protein_coding missense_variant MODERATE 200A>G Asp67Gly
M0090595 JDOJADAF_00055 46704 3 Skin 0.04 protein_coding synonymous_variant LOW 309C>T Tyr103Tyr
M0090596 JDOJADAF_00055 46723 3 Skin 0.04 protein_coding missense_variant MODERATE 328T>A Ser110Thr
M0090597 JDOJADAF_00055 46725 3 Skin 0.04 protein_coding synonymous_variant LOW 330A>T Ser110Ser
M0090598 JDOJADAF_00055 46743 3 Skin 0.04 protein_coding synonymous_variant LOW 348A>C Pro116Pro
M0090599 JDOJADAF_00055 46749 3 Skin 0.04 protein_coding synonymous_variant LOW 354G>A Glu118Glu
M0090600 JDOJADAF_00055 46752 3 Skin 0.04 protein_coding synonymous_variant LOW 357T>C Leu119Leu
M0090601 JDOJADAF_00055 46758 3 Skin 0.04 protein_coding synonymous_variant LOW 363G>A Val121Val
M0090602 JDOJADAF_00055 46767 3 Skin 0.04 protein_coding synonymous_variant LOW 372C>T Gly124Gly
M0090603 JDOJADAF_00055 46773 3 Skin 0.04 protein_coding synonymous_variant LOW 378G>A Lys126Lys
M0090604 JDOJADAF_00055 46776 3 Skin 0.04 protein_coding synonymous_variant LOW 381C>T Pro127Pro
M0090605 JDOJADAF_00055 46827 3 Skin 0.04 protein_coding synonymous_variant LOW 432C>T Asn144Asn
M0090606 JDOJADAF_00003 1192 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -74T>C None
M0090607 JDOJADAF_00003 1220 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -46A>T None
M0090608 JDOJADAF_00003 1487 3 Skin 0.04 protein_coding synonymous_variant LOW 222G>A Lys74Lys
M0090609 JDOJADAF_00003 1904 3 Skin 0.04 protein_coding synonymous_variant LOW 639T>G Gly213Gly
M0090610 JDOJADAF_00003 1913 3 Skin 0.04 protein_coding synonymous_variant LOW 648T>C Asp216Asp
M0090611 JDOJADAF_00003 1922 3 Skin 0.04 protein_coding synonymous_variant LOW 657C>T Ser219Ser
M0090612 JDOJADAF_00003 1934 3 Skin 0.04 protein_coding synonymous_variant LOW 669C>G Thr223Thr
M0090613 JDOJADAF_00003 1946 3 Skin 0.04 protein_coding synonymous_variant LOW 681C>G Thr227Thr
M0090614 JDOJADAF_00003 1953 3 Skin 0.04 protein_coding missense_variant MODERATE 688A>G Thr230Ala
M0090615 JDOJADAF_00003 1958 3 Skin 0.04 protein_coding synonymous_variant LOW 693T>C Asp231Asp
M0090616 JDOJADAF_00003 1985 3 Skin 0.04 protein_coding missense_variant MODERATE 720T>A His240Gln
M0090617 JDOJADAF_00003 1988 3 Skin 0.04 protein_coding synonymous_variant LOW 723T>C Asp241Asp
M0090618 JDOJADAF_00003 1989 3 Skin 0.04 protein_coding synonymous_variant LOW 724T>C Leu242Leu
M0090619 JDOJADAF_00003 1991 3 Skin 0.04 protein_coding synonymous_variant LOW 726A>G Leu242Leu
M0090620 JDOJADAF_00003 2069 3 Skin 0.04 protein_coding synonymous_variant LOW 804G>C Val268Val
M0090621 JDOJADAF_00003 2075 3 Skin 0.04 protein_coding synonymous_variant LOW 810T>C Gly270Gly
M0090622 JDOJADAF_00003 2120 3 Skin 0.04 protein_coding synonymous_variant LOW 855C>A Arg285Arg
M0090623 JDOJADAF_00003 2123 3 Skin 0.04 protein_coding synonymous_variant LOW 858A>T Thr286Thr
M0090624 JDOJADAF_00003 2138 3 Skin 0.04 protein_coding synonymous_variant LOW 873T>C Leu291Leu
M0090625 JDOJADAF_00003 2147 3 Skin 0.04 protein_coding synonymous_variant LOW 882A>C Ala294Ala
M0090626 JDOJADAF_00003 2148 3 Skin 0.04 protein_coding synonymous_variant LOW 883C>A Arg295Arg
M0090627 JDOJADAF_00003 2149 3 Skin 0.04 protein_coding missense_variant MODERATE 884G>A Arg295Gln
M0090628 JDOJADAF_00003 2156 3 Skin 0.04 protein_coding synonymous_variant LOW 891T>C Asn297Asn
M0090629 JDOJADAF_00003 2165 3 Skin 0.04 protein_coding synonymous_variant LOW 900G>A Glu300Glu
M0090630 JDOJADAF_00003 2340 4 Skin 0.05 protein_coding missense_variant MODERATE 1075A>G Thr359Ala
M0090631 JDOJADAF_00003 2372 3 Skin 0.04 protein_coding synonymous_variant LOW 1107C>T Asp369Asp
M0090632 JDOJADAF_00003 2376 3 Skin 0.04 protein_coding synonymous_variant LOW 1111T>C Leu371Leu
M0090633 JDOJADAF_00003 2381 3 Skin 0.04 protein_coding synonymous_variant LOW 1116G>A Leu372Leu
M0090634 JDOJADAF_00029 22526 3 Skin 0.04 protein_coding missense_variant MODERATE 739A>G Asn247Asp
M0090635 JDOJADAF_00003 2216 3 Skin 0.04 protein_coding synonymous_variant LOW 951A>G Gln317Gln
M0090636 JDOJADAF_00003 2246 3 Skin 0.04 protein_coding synonymous_variant LOW 981A>G Thr327Thr
M0090637 JDOJADAF_00003 2249 3 Skin 0.04 protein_coding synonymous_variant LOW 984G>A Ser328Ser
M0090638 JDOJADAF_00003 2261 3 Skin 0.04 protein_coding synonymous_variant LOW 996T>C Ile332Ile
M0090639 JDOJADAF_00003 2495 3 Skin 0.04 protein_coding synonymous_variant LOW 1230A>G Leu410Leu
M0090640 JDOJADAF_00003 2717 3 Skin 0.04 protein_coding missense_variant MODERATE 1452G>T Gln484His
M0090641 JDOJADAF_00003 2732 3 Skin 0.04 protein_coding synonymous_variant LOW 1467G>C Arg489Arg
M0090642 JDOJADAF_00003 2735 3 Skin 0.04 protein_coding synonymous_variant LOW 1470T>G Leu490Leu
M0090643 JDOJADAF_00003 2777 3 Skin 0.04 protein_coding synonymous_variant LOW 1512C>T Ile504Ile
M0090644 JDOJADAF_00003 2789 3 Skin 0.04 protein_coding synonymous_variant LOW 1524T>C Gly508Gly
M0090645 JDOJADAF_00003 2912 3 Skin 0.04 protein_coding synonymous_variant LOW 1647C>G Gly549Gly
M0090646 JDOJADAF_00003 3110 3 Skin 0.04 protein_coding synonymous_variant LOW 1845A>G Val615Val
M0090647 JDOJADAF_00016 17875 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -3617A>G None
M0090648 JDOJADAF_00025 18014 6 Skin 0.07 protein_coding missense_variant MODERATE 115C>A Leu39Met
M0090649 JDOJADAF_00016 18075 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -3817T>C None
M0090650 JDOJADAF_00026 18492 6 Skin 0.07 protein_coding synonymous_variant LOW 169C>T Leu57Leu
M0090651 JDOJADAF_00026 18503 5 Skin 0.06 protein_coding synonymous_variant LOW 180G>A Ala60Ala
M0090652 JDOJADAF_00026 18518 6 Skin 0.07 protein_coding synonymous_variant LOW 195C>G Val65Val
M0090653 JDOJADAF_00026 18626 7 Skin 0.08 protein_coding synonymous_variant LOW 303T>C Ile101Ile
M0090654 JDOJADAF_00026 18941 3 Skin 0.04 protein_coding synonymous_variant LOW 618G>C Gly206Gly
M0090655 JDOJADAF_00026 18956 4 Skin 0.05 protein_coding synonymous_variant LOW 633C>G Val211Val
M0090656 JDOJADAF_00026 18959 5 Skin 0.06 protein_coding synonymous_variant LOW 636T>A Val212Val
M0090657 JDOJADAF_00026 18977 3 Skin 0.04 protein_coding synonymous_variant LOW 654A>C Pro218Pro
M0090658 JDOJADAF_00026 19126 3 Skin 0.04 protein_coding missense_variant MODERATE 803G>A Ser268Asn
M0090659 JDOJADAF_00026 19140 3 Skin 0.04 protein_coding missense_variant MODERATE 817G>A Asp273Asn
M0090660 JDOJADAF_00016 18124 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3866T>G None
M0090661 JDOJADAF_00016 18187 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3929A>G None
M0090662 JDOJADAF_00026 19040 3 Skin 0.04 protein_coding synonymous_variant LOW 717A>G Pro239Pro
M0090663 JDOJADAF_00029 24895 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -1631C>G None
M0090664 JDOJADAF_00035 27682 3 Skin 0.04 protein_coding missense_variant MODERATE 359T>C Met120Thr
M0090665 JDOJADAF_00024 17703 3 Skin 0.04 protein_coding synonymous_variant LOW 141T>C Thr47Thr
M0090666 JDOJADAF_00025 17949 4 Skin 0.05 protein_coding missense_variant MODERATE 50C>G Thr17Ser
M0090667 JDOJADAF_00016 18064 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3806C>T None
M0090668 JDOJADAF_00016 18087 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -3829A>G None
M0090669 JDOJADAF_00008 7950 3 Skin 0.04 protein_coding synonymous_variant LOW 1233C>G Leu411Leu
M0090670 JDOJADAF_00026 18857 4 Skin 0.05 protein_coding synonymous_variant LOW 534C>A Gly178Gly
M0090671 JDOJADAF_00026 18860 4 Skin 0.05 protein_coding synonymous_variant LOW 537A>T Val179Val
M0090672 JDOJADAF_00016 18201 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -3943T>C None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term