Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C511
  Reference Plasmid   NZ_CP024445.1
  Reference Plasmid Size   134961
  Reference Plasmid GC Content   0.39
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0091863 EJMCANEL_00129 119588 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -660A>T None
M0091864 EJMCANEL_00129 119747 15 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -819A>G None
M0091865 EJMCANEL_00132 120493 12 Skin 0.12 protein_coding synonymous_variant LOW 501G>A Lys167Lys
M0091866 EJMCANEL_00132 120496 12 Skin 0.12 protein_coding synonymous_variant LOW 498T>C Asp166Asp
M0091867 EJMCANEL_00132 120510 11 Skin 0.11 protein_coding missense_variant MODERATE 484C>A Gln162Lys
M0091868 EJMCANEL_00132 120527 10 Skin 0.10 protein_coding missense_variant MODERATE 467C>T Thr156Ile
M0091869 EJMCANEL_00132 120703 12 Skin 0.12 protein_coding synonymous_variant LOW 291T>G Pro97Pro
M0091870 EJMCANEL_00134 121857 3 Skin 0.03 protein_coding synonymous_variant LOW 1446C>T Gly482Gly
M0091871 EJMCANEL_00134 122002 9 Skin 0.09 protein_coding missense_variant MODERATE 1301G>A Ser434Asn
M0091872 EJMCANEL_00134 122010 9 Skin 0.09 protein_coding synonymous_variant LOW 1293A>G Glu431Glu
M0091873 EJMCANEL_00134 122014 9 Skin 0.09 protein_coding missense_variant MODERATE 1289A>G Asp430Gly
M0091874 EJMCANEL_00134 122035 10 Skin 0.10 protein_coding missense_variant MODERATE 1268A>G Lys423Arg
M0091875 EJMCANEL_00134 122043 9 Skin 0.09 protein_coding synonymous_variant LOW 1260C>G Val420Val
M0091876 EJMCANEL_00134 122047 10 Skin 0.10 protein_coding missense_variant MODERATE 1256A>C Glu419Ala
M0091877 EJMCANEL_00134 122061 7 Skin 0.07 protein_coding synonymous_variant LOW 1242T>G Arg414Arg
M0091878 EJMCANEL_00134 122245 12 Skin 0.12 protein_coding missense_variant MODERATE 1058T>C Val353Ala
M0091879 EJMCANEL_00134 122288 10 Skin 0.10 protein_coding missense_variant MODERATE 1015C>T Leu339Phe
M0091880 EJMCANEL_00134 122290 10 Skin 0.10 protein_coding missense_variant MODERATE 1013A>C Gln338Pro
M0091881 EJMCANEL_00134 122339 12 Skin 0.12 protein_coding missense_variant MODERATE 964T>C Tyr322His
M0091882 EJMCANEL_00134 122370 4 Skin 0.04 protein_coding synonymous_variant LOW 933G>A Pro311Pro
M0091883 EJMCANEL_00058 53746 20 Skin 0.20 protein_coding synonymous_variant LOW 828C>A Thr276Thr
M0091884 EJMCANEL_00058 53860 20 Skin 0.20 protein_coding synonymous_variant LOW 714T>C Ile238Ile
M0091885 EJMCANEL_00058 53863 20 Skin 0.20 protein_coding synonymous_variant LOW 711G>A Glu237Glu
M0091886 EJMCANEL_00058 53872 20 Skin 0.20 protein_coding synonymous_variant LOW 702C>T Val234Val
M0091887 EJMCANEL_00058 53881 21 Skin 0.21 protein_coding synonymous_variant LOW 693T>C Asp231Asp
M0091888 EJMCANEL_00058 53920 18 Skin 0.18 protein_coding synonymous_variant LOW 654C>A Pro218Pro
M0091889 EJMCANEL_00058 53938 3 Skin 0.03 protein_coding synonymous_variant LOW 636T>A Val212Val
M0091890 EJMCANEL_00058 53941 3 Skin 0.03 protein_coding synonymous_variant LOW 633C>G Val211Val
M0091891 EJMCANEL_00058 54024 3 Skin 0.03 protein_coding missense_variant MODERATE 550T>G Leu184Val
M0091892 EJMCANEL_00058 54241 6 Skin 0.06 protein_coding synonymous_variant LOW 333C>T Gly111Gly
M0091893 EJMCANEL_00058 54262 6 Skin 0.06 protein_coding synonymous_variant LOW 312T>C Asn104Asn
M0091894 EJMCANEL_00058 54283 9 Skin 0.09 protein_coding synonymous_variant LOW 291A>G Thr97Thr
M0091895 EJMCANEL_00058 54710 6 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -137C>T None
M0091896 EJMCANEL_00012 7712 3 Skin 0.03 protein_coding missense_variant MODERATE 669T>G Ile223Met
M0091897 EJMCANEL_00012 7715 3 Skin 0.03 protein_coding synonymous_variant LOW 672T>G Gly224Gly
M0091898 EJMCANEL_00012 7779 3 Skin 0.03 protein_coding synonymous_variant LOW 736C>T Leu246Leu
M0091899 EJMCANEL_00012 7781 3 Skin 0.03 protein_coding synonymous_variant LOW 738G>A Leu246Leu
M0091900 EJMCANEL_00012 7850 4 Skin 0.04 protein_coding synonymous_variant LOW 807T>C Arg269Arg
M0091901 EJMCANEL_00012 7853 4 Skin 0.04 protein_coding synonymous_variant LOW 810C>T Tyr270Tyr
M0091902 EJMCANEL_00012 7858 6 Skin 0.06 protein_coding missense_variant MODERATE 815T>C Ile272Thr
M0091903 EJMCANEL_00012 7922 4 Skin 0.04 protein_coding synonymous_variant LOW 879C>T Ile293Ile
M0091904 EJMCANEL_00013 8614 4 Skin 0.04 protein_coding synonymous_variant LOW 381G>A Leu127Leu
M0091905 EJMCANEL_00013 8619 4 Skin 0.04 protein_coding missense_variant MODERATE 386A>G Asn129Ser
M0091906 EJMCANEL_00013 8626 4 Skin 0.04 protein_coding synonymous_variant LOW 393C>T Ser131Ser
M0091907 EJMCANEL_00013 8630 4 Skin 0.04 protein_coding missense_variant MODERATE 397G>T Ala133Ser
M0091908 EJMCANEL_00013 8632 4 Skin 0.04 protein_coding synonymous_variant LOW 399T>A Ala133Ala
M0091909 EJMCANEL_00013 9404 3 Skin 0.03 protein_coding synonymous_variant LOW 1171C>T Leu391Leu
M0091910 EJMCANEL_00013 9407 3 Skin 0.03 protein_coding synonymous_variant LOW 1174T>C Leu392Leu
M0091911 EJMCANEL_00013 9550 3 Skin 0.03 protein_coding synonymous_variant LOW 1317G>A Arg439Arg
M0091912 EJMCANEL_00013 9551 3 Skin 0.03 protein_coding missense_variant MODERATE 1318A>G Asn440Asp
M0091913 EJMCANEL_00013 9556 3 Skin 0.03 protein_coding synonymous_variant LOW 1323A>G Lys441Lys
M0091914 EJMCANEL_00013 9565 4 Skin 0.04 protein_coding synonymous_variant LOW 1332A>G Thr444Thr
M0091915 EJMCANEL_00013 9570 4 Skin 0.04 protein_coding missense_variant MODERATE 1337C>T Ala446Val
M0091916 EJMCANEL_00013 9574 5 Skin 0.05 protein_coding synonymous_variant LOW 1341G>A Leu447Leu
M0091917 EJMCANEL_00013 9577 5 Skin 0.05 protein_coding synonymous_variant LOW 1344T>C Pro448Pro
M0091918 EJMCANEL_00013 9586 5 Skin 0.05 protein_coding synonymous_variant LOW 1353C>T His451His
M0091919 EJMCANEL_00013 9587 5 Skin 0.05 protein_coding missense_variant MODERATE 1354A>G Ser452Gly
M0091920 EJMCANEL_00134 122808 7 Skin 0.07 protein_coding synonymous_variant LOW 495A>G Pro165Pro
M0091921 EJMCANEL_00134 122859 11 Skin 0.11 protein_coding synonymous_variant LOW 444C>A Ala148Ala
M0091922 EJMCANEL_00134 122898 9 Skin 0.09 protein_coding synonymous_variant LOW 405A>G Gln135Gln
M0091923 EJMCANEL_00134 122904 4 Skin 0.04 protein_coding synonymous_variant LOW 399A>T Arg133Arg
M0091924 EJMCANEL_00134 122922 3 Skin 0.03 protein_coding synonymous_variant LOW 381G>A Glu127Glu
M0091925 EJMCANEL_00134 123132 11 Skin 0.11 protein_coding synonymous_variant LOW 171C>T Arg57Arg
M0091926 EJMCANEL_00134 123228 9 Skin 0.09 protein_coding synonymous_variant LOW 75C>T Phe25Phe
M0091927 EJMCANEL_00135 123454 11 Skin 0.11 protein_coding synonymous_variant LOW 222T>G Thr74Thr
M0091928 EJMCANEL_00135 123466 11 Skin 0.11 protein_coding synonymous_variant LOW 210G>A Arg70Arg
M0091929 EJMCANEL_00135 123468 11 Skin 0.11 protein_coding synonymous_variant LOW 208A>C Arg70Arg
M0091930 EJMCANEL_00135 123499 6 Skin 0.06 protein_coding synonymous_variant LOW 177A>T Ala59Ala
M0091931 EJMCANEL_00135 123502 6 Skin 0.06 protein_coding synonymous_variant LOW 174G>T Val58Val
M0091932 EJMCANEL_00135 123505 6 Skin 0.06 protein_coding synonymous_variant LOW 171A>G Gln57Gln
M0091933 EJMCANEL_00135 123509 6 Skin 0.06 protein_coding missense_variant MODERATE 167G>A Arg56His
M0091934 EJMCANEL_00058 53757 10 Skin 0.10 protein_coding missense_variant MODERATE 817G>A Asp273Asn
M0091935 EJMCANEL_00058 53759 9 Skin 0.09 protein_coding missense_variant MODERATE 815T>C Met272Thr
M0091936 EJMCANEL_00058 53771 9 Skin 0.09 protein_coding missense_variant MODERATE 803G>A Ser268Asn
M0091937 EJMCANEL_00058 53857 9 Skin 0.09 protein_coding synonymous_variant LOW 717A>G Pro239Pro
M0091938 EJMCANEL_00058 54481 8 Skin 0.08 protein_coding synonymous_variant LOW 93A>G Arg31Arg
M0091939 EJMCANEL_00058 54773 7 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -200C>A None
M0091940 EJMCANEL_00058 53733 7 Skin 0.07 protein_coding missense_variant MODERATE 841T>G Leu281Val
M0091941 EJMCANEL_00058 53824 9 Skin 0.09 protein_coding synonymous_variant LOW 750C>G Thr250Thr
M0091942 EJMCANEL_00058 53827 9 Skin 0.09 protein_coding synonymous_variant LOW 747T>C Ile249Ile
M0091943 EJMCANEL_00058 54256 8 Skin 0.08 protein_coding synonymous_variant LOW 318T>C Gly106Gly
M0091944 EJMCANEL_00058 54271 5 Skin 0.05 protein_coding synonymous_variant LOW 303C>T Ile101Ile
M0091945 EJMCANEL_00058 54282 5 Skin 0.05 protein_coding missense_variant MODERATE 292G>T Val98Phe
M0091946 EJMCANEL_00058 54379 4 Skin 0.04 protein_coding synonymous_variant LOW 195C>G Val65Val
M0091947 EJMCANEL_00058 54394 4 Skin 0.04 protein_coding synonymous_variant LOW 180G>A Ala60Ala
M0091948 EJMCANEL_00058 54405 5 Skin 0.05 protein_coding synonymous_variant LOW 169C>T Leu57Leu
M0091949 EJMCANEL_00130 119250 6 Skin 0.06 protein_coding synonymous_variant LOW 39C>T Asn13Asn
M0091950 EJMCANEL_00129 119629 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -701G>T None
M0091951 EJMCANEL_00132 120151 3 Skin 0.03 protein_coding synonymous_variant LOW 843A>G Gln281Gln
M0091952 EJMCANEL_00132 120319 12 Skin 0.12 protein_coding synonymous_variant LOW 675A>G Leu225Leu
M0091953 EJMCANEL_00134 122496 4 Skin 0.04 protein_coding missense_variant MODERATE 807T>A Asp269Glu
M0091954 EJMCANEL_00134 122509 4 Skin 0.04 protein_coding missense_variant MODERATE 794A>C Asn265Thr
M0091955 EJMCANEL_00141 129085 4 Skin 0.04 protein_coding synonymous_variant LOW 129G>A Ala43Ala
M0091956 EJMCANEL_00141 129295 3 Skin 0.03 protein_coding synonymous_variant LOW 339C>G Val113Val
M0091957 EJMCANEL_00141 129313 4 Skin 0.04 protein_coding synonymous_variant LOW 357C>T Asp119Asp
M0091958 EJMCANEL_00085 78909 3 Skin 0.03 protein_coding missense_variant MODERATE 1790T>C Ile597Thr
M0091959 EJMCANEL_00086 79552 3 Skin 0.03 protein_coding missense_variant MODERATE 235A>C Ile79Leu
M0091960 EJMCANEL_00018 13028 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -624C>T None
M0091961 EJMCANEL_00018 13223 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -429A>G None
M0091962 EJMCANEL_00018 13314 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -338C>T None
M0091963 EJMCANEL_00018 13588 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -64C>G None
M0091964 EJMCANEL_00018 13648 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4A>G None
M0091965 EJMCANEL_00018 13817 3 Skin 0.03 protein_coding synonymous_variant LOW 166C>T Leu56Leu
M0091966 EJMCANEL_00018 14015 5 Skin 0.05 protein_coding missense_variant MODERATE 364C>A Gln122Lys
M0091967 EJMCANEL_00018 14016 5 Skin 0.05 protein_coding missense_variant MODERATE 365A>T Gln122Leu
M0091968 EJMCANEL_00018 14021 5 Skin 0.05 protein_coding missense_variant MODERATE 370T>G Ser124Ala
M0091969 EJMCANEL_00010 5769 3 Skin 0.03 protein_coding synonymous_variant LOW 204C>T Arg68Arg
M0091970 EJMCANEL_00013 8574 3 Skin 0.03 protein_coding missense_variant MODERATE 341T>C Val114Ala
M0091971 EJMCANEL_00014 10004 4 Skin 0.04 protein_coding missense_variant MODERATE 5G>C Ser2Thr
M0091972 EJMCANEL_00014 10005 4 Skin 0.04 protein_coding synonymous_variant LOW 6T>C Ser2Ser
M0091973 EJMCANEL_00058 54761 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -188T>C None
M0091974 EJMCANEL_00058 54833 8 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -260A>G None
M0091975 EJMCANEL_00061 56291 4 Skin 0.04 protein_coding synonymous_variant LOW 78T>C Phe26Phe
M0091976 EJMCANEL_00061 56318 3 Skin 0.03 protein_coding synonymous_variant LOW 51A>G Leu17Leu
M0091977 EJMCANEL_00061 56320 3 Skin 0.03 protein_coding synonymous_variant LOW 49C>T Leu17Leu
M0091978 EJMCANEL_00061 56321 3 Skin 0.03 protein_coding missense_variant MODERATE 48A>C Glu16Asp
M0091979 EJMCANEL_00061 56323 3 Skin 0.03 protein_coding missense_variant MODERATE 46G>C Glu16Gln
M0091980 EJMCANEL_00058 54090 3 Skin 0.03 protein_coding missense_variant MODERATE 484C>T Leu162Phe
M0091981 EJMCANEL_00058 54810 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -237T>C None
M0091982 EJMCANEL_00058 54981 8 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -408T>C None
M0091983 EJMCANEL_00058 55022 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -449T>C None
M0091984 EJMCANEL_00058 55689 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -1116A>T None
M0091985 EJMCANEL_00058 55693 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -1120T>C None
M0091986 EJMCANEL_00058 55696 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -1123G>A None
M0091987 EJMCANEL_00060 55761 3 Skin 0.03 protein_coding synonymous_variant LOW 291C>T Gly97Gly
M0091988 EJMCANEL_00130 124237 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4949A>C None
M0091989 EJMCANEL_00130 124240 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4952T>C None
M0091990 EJMCANEL_00131 124332 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4286G>A None
M0091991 EJMCANEL_00136 124473 3 Skin 0.03 protein_coding synonymous_variant LOW 51A>G Gln17Gln
M0091992 EJMCANEL_00141 129073 3 Skin 0.03 protein_coding synonymous_variant LOW 117A>G Ala39Ala
M0091993 EJMCANEL_00141 129074 3 Skin 0.03 protein_coding missense_variant MODERATE 118C>G Gln40Glu
M0091994 EJMCANEL_00141 129076 3 Skin 0.03 protein_coding synonymous_variant LOW 120G>A Gln40Gln
M0091995 EJMCANEL_00141 129079 3 Skin 0.03 protein_coding synonymous_variant LOW 123T>C Arg41Arg
M0091996 EJMCANEL_00142 129558 3 Skin 0.03 protein_coding synonymous_variant LOW 126G>C Ala42Ala
M0091997 EJMCANEL_00143 129758 3 Skin 0.03 protein_coding synonymous_variant LOW 78T>G Val26Val
M0091998 EJMCANEL_00143 129777 3 Skin 0.03 protein_coding synonymous_variant LOW 97C>T Leu33Leu
M0091999 EJMCANEL_00143 129782 3 Skin 0.03 protein_coding synonymous_variant LOW 102A>G Gly34Gly
M0092000 EJMCANEL_00060 55748 4 Skin 0.04 protein_coding synonymous_variant LOW 304C>T Leu102Leu
M0092001 EJMCANEL_00060 55797 4 Skin 0.04 protein_coding synonymous_variant LOW 255G>C Pro85Pro
M0092002 EJMCANEL_00060 55812 4 Skin 0.04 protein_coding synonymous_variant LOW 240A>G Gln80Gln
M0092003 EJMCANEL_00060 55839 4 Skin 0.04 protein_coding synonymous_variant LOW 213A>G Ser71Ser
M0092004 EJMCANEL_00060 55893 4 Skin 0.04 protein_coding synonymous_variant LOW 159T>C Val53Val
M0092005 EJMCANEL_00060 55902 4 Skin 0.04 protein_coding synonymous_variant LOW 150C>T Val50Val
M0092006 EJMCANEL_00058 54977 4 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -404T>C None
M0092007 EJMCANEL_00059 55099 3 Skin 0.03 protein_coding missense_variant MODERATE 43A>G Thr15Ala
M0092008 EJMCANEL_00060 55994 3 Skin 0.03 protein_coding missense_variant MODERATE 58C>A Gln20Lys
M0092009 EJMCANEL_00060 55998 3 Skin 0.03 protein_coding synonymous_variant LOW 54G>T Val18Val
M0092010 EJMCANEL_00145 134348 3 Skin 0.03 protein_coding synonymous_variant LOW 3054A>G Pro1018Pro
M0092011 EJMCANEL_00021 14946 5 Skin 0.05 protein_coding synonymous_variant LOW 42G>T Ala14Ala
M0092012 EJMCANEL_00021 15012 5 Skin 0.05 protein_coding synonymous_variant LOW 108A>G Leu36Leu
M0092013 EJMCANEL_00021 15020 3 Skin 0.03 protein_coding missense_variant MODERATE 116C>T Thr39Ile
M0092014 EJMCANEL_00021 15051 3 Skin 0.03 protein_coding missense_variant MODERATE 147C>A Asp49Glu
M0092015 EJMCANEL_00021 15079 3 Skin 0.03 protein_coding missense_variant MODERATE 175C>A Gln59Lys
M0092016 EJMCANEL_00021 15090 3 Skin 0.03 protein_coding synonymous_variant LOW 186G>A Leu62Leu
M0092017 EJMCANEL_00021 15093 3 Skin 0.03 protein_coding synonymous_variant LOW 189A>G Ser63Ser
M0092018 EJMCANEL_00058 54382 3 Skin 0.03 protein_coding synonymous_variant LOW 192A>G Pro64Pro
M0092019 EJMCANEL_00058 54385 3 Skin 0.03 protein_coding synonymous_variant LOW 189T>C Phe63Phe
M0092020 EJMCANEL_00134 122234 3 Skin 0.03 protein_coding missense_variant MODERATE 1069G>A Val357Ile
M0092021 EJMCANEL_00134 122889 5 Skin 0.05 protein_coding synonymous_variant LOW 414C>T Tyr138Tyr
M0092022 EJMCANEL_00134 122934 6 Skin 0.06 protein_coding synonymous_variant LOW 369T>C Ile123Ile
M0092023 EJMCANEL_00134 122946 7 Skin 0.07 protein_coding synonymous_variant LOW 357A>G Leu119Leu
M0092024 EJMCANEL_00134 123240 8 Skin 0.08 protein_coding synonymous_variant LOW 63G>A Leu21Leu
M0092025 EJMCANEL_00129 123317 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4389G>A None
M0092026 EJMCANEL_00129 123318 8 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4390T>C None
M0092027 EJMCANEL_00129 123321 8 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4393G>A None
M0092028 EJMCANEL_00129 123324 5 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4396A>C None
M0092029 EJMCANEL_00135 123574 7 Skin 0.07 protein_coding synonymous_variant LOW 102A>G Ala34Ala
M0092030 EJMCANEL_00135 123618 8 Skin 0.08 protein_coding missense_variant MODERATE 58A>G Asn20Asp
M0092031 EJMCANEL_00135 123620 8 Skin 0.08 protein_coding missense_variant MODERATE 56A>G Asp19Gly
M0092032 EJMCANEL_00135 123621 8 Skin 0.08 protein_coding missense_variant MODERATE 55G>A Asp19Asn
M0092033 EJMCANEL_00019 14511 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -56G>A None
M0092034 EJMCANEL_00134 122721 3 Skin 0.03 protein_coding synonymous_variant LOW 582C>T Tyr194Tyr
M0092035 EJMCANEL_00134 122724 4 Skin 0.04 protein_coding synonymous_variant LOW 579C>A Thr193Thr
M0092036 EJMCANEL_00134 122727 3 Skin 0.03 protein_coding synonymous_variant LOW 576G>A Ala192Ala
M0092037 EJMCANEL_00134 123294 3 Skin 0.03 protein_coding missense_variant MODERATE 9T>A Phe3Leu
M0092038 EJMCANEL_00129 123323 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4395G>A None
M0092039 EJMCANEL_00132 120213 5 Skin 0.05 protein_coding missense_variant MODERATE 781A>G Ile261Val
M0092040 EJMCANEL_00132 120550 4 Skin 0.04 protein_coding synonymous_variant LOW 444A>G Val148Val
M0092041 EJMCANEL_00060 55845 3 Skin 0.03 protein_coding synonymous_variant LOW 207C>T Gly69Gly
M0092042 EJMCANEL_00130 119178 4 Skin 0.04 protein_coding synonymous_variant LOW 111G>A Ala37Ala
M0092043 EJMCANEL_00130 119199 4 Skin 0.04 protein_coding synonymous_variant LOW 90C>A Ile30Ile
M0092044 EJMCANEL_00130 119223 3 Skin 0.03 protein_coding synonymous_variant LOW 66C>T Thr22Thr
M0092045 EJMCANEL_00134 122570 3 Skin 0.03 protein_coding synonymous_variant LOW 733T>C Leu245Leu
M0092046 EJMCANEL_00134 122786 3 Skin 0.03 protein_coding missense_variant MODERATE 517T>G Leu173Val
M0092047 EJMCANEL_00134 122587 3 Skin 0.03 protein_coding missense_variant MODERATE 716G>A Ser239Asn
M0092048 EJMCANEL_00134 122589 3 Skin 0.03 protein_coding synonymous_variant LOW 714T>C Asp238Asp
M0092049 EJMCANEL_00134 122628 4 Skin 0.04 protein_coding synonymous_variant LOW 675C>T Thr225Thr
M0092050 EJMCANEL_00130 119169 3 Skin 0.03 protein_coding synonymous_variant LOW 120C>T Phe40Phe
M0092051 EJMCANEL_00130 119190 4 Skin 0.04 protein_coding synonymous_variant LOW 99C>T Asn33Asn
M0092052 EJMCANEL_00134 122634 3 Skin 0.03 protein_coding synonymous_variant LOW 669A>G Lys223Lys
M0092053 EJMCANEL_00134 122640 3 Skin 0.03 protein_coding synonymous_variant LOW 663G>A Gln221Gln
M0092054 EJMCANEL_00134 122643 3 Skin 0.03 protein_coding synonymous_variant LOW 660A>G Glu220Glu
M0092055 EJMCANEL_00134 122649 3 Skin 0.03 protein_coding synonymous_variant LOW 654T>A Gly218Gly
M0092056 EJMCANEL_00134 122650 3 Skin 0.03 protein_coding missense_variant MODERATE 653G>A Gly218Asp
M0092057 EJMCANEL_00134 122655 3 Skin 0.03 protein_coding synonymous_variant LOW 648G>A Gln216Gln
M0092058 EJMCANEL_00132 120593 3 Skin 0.03 protein_coding missense_variant MODERATE 401G>A Ser134Asn
M0092059 EJMCANEL_00132 120610 3 Skin 0.03 protein_coding synonymous_variant LOW 384G>A Gln128Gln






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
EJMCANEL_00145 PHI:3317 hsdR 74.3 0 1 1048 1.0000 1.0000 rodents Glasser's disease involved in pathogenicity reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term