Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C519
  Reference Plasmid   NZ_CP025409.1
  Reference Plasmid Size   92522
  Reference Plasmid GC Content   0.61
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0092977 BJGDHMCD_00003 1710 5 Skin 0.42 protein_coding synonymous_variant LOW 1392C>T Ile464Ile
M0092978 BJGDHMCD_00003 1739 5 Skin 0.42 protein_coding missense_variant MODERATE 1363G>C Val455Leu
M0092979 BJGDHMCD_00003 1886 5 Skin 0.42 protein_coding synonymous_variant LOW 1216T>C Leu406Leu
M0092980 BJGDHMCD_00003 2139 5 Skin 0.42 protein_coding synonymous_variant LOW 963A>G Gly321Gly
M0092981 BJGDHMCD_00003 2277 5 Skin 0.42 protein_coding synonymous_variant LOW 825C>A Ser275Ser
M0092982 BJGDHMCD_00003 2322 4 Skin 0.33 protein_coding synonymous_variant LOW 780C>T Leu260Leu
M0092983 BJGDHMCD_00003 2503 5 Skin 0.42 protein_coding missense_variant MODERATE 599C>A Ala200Glu
M0092984 BJGDHMCD_00003 2559 5 Skin 0.42 protein_coding synonymous_variant LOW 543G>T Leu181Leu
M0092985 BJGDHMCD_00003 2601 5 Skin 0.42 protein_coding synonymous_variant LOW 501G>T Leu167Leu
M0092986 BJGDHMCD_00003 2711 3 Skin 0.25 protein_coding missense_variant MODERATE 391G>A Glu131Lys
M0092987 BJGDHMCD_00003 2730 5 Skin 0.42 protein_coding synonymous_variant LOW 372G>C Arg124Arg
M0092988 BJGDHMCD_00003 2795 4 Skin 0.33 protein_coding missense_variant MODERATE 307G>A Ala103Thr
M0092989 BJGDHMCD_00003 2803 4 Skin 0.33 protein_coding missense_variant MODERATE 299A>G Asp100Gly
M0092990 BJGDHMCD_00003 2876 4 Skin 0.33 protein_coding missense_variant MODERATE 226G>A Asp76Asn
M0092991 BJGDHMCD_00003 2879 4 Skin 0.33 protein_coding missense_variant MODERATE 223G>T Ala75Ser
M0092992 BJGDHMCD_00003 2883 4 Skin 0.33 protein_coding synonymous_variant LOW 219T>G Leu73Leu
M0092993 BJGDHMCD_00003 2901 4 Skin 0.33 protein_coding synonymous_variant LOW 201C>G Ala67Ala
M0092994 BJGDHMCD_00003 2913 4 Skin 0.33 protein_coding synonymous_variant LOW 189C>G Pro63Pro
M0092995 BJGDHMCD_00003 2937 4 Skin 0.33 protein_coding synonymous_variant LOW 165A>G Ala55Ala
M0092996 BJGDHMCD_00003 2938 4 Skin 0.33 protein_coding missense_variant MODERATE 164C>T Ala55Val
M0092997 BJGDHMCD_00003 2943 4 Skin 0.33 protein_coding synonymous_variant LOW 159G>T Ala53Ala
M0092998 BJGDHMCD_00003 3048 3 Skin 0.25 protein_coding synonymous_variant LOW 54G>A Gln18Gln
M0092999 BJGDHMCD_00001 3123 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -2326G>T None
M0093000 BJGDHMCD_00001 3124 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -2327A>G None
M0093001 BJGDHMCD_00004 3314 3 Skin 0.25 protein_coding missense_variant MODERATE 519G>T Glu173Asp
M0093002 BJGDHMCD_00004 3439 3 Skin 0.25 protein_coding missense_variant MODERATE 394A>T Met132Leu
M0093003 BJGDHMCD_00004 3569 3 Skin 0.25 protein_coding synonymous_variant LOW 264A>C Ser88Ser
M0093004 BJGDHMCD_00004 3686 3 Skin 0.25 protein_coding missense_variant MODERATE 147A>C Leu49Phe
M0093005 BJGDHMCD_00004 3733 4 Skin 0.33 protein_coding missense_variant MODERATE 100A>G Thr34Ala
M0093006 BJGDHMCD_00004 3740 4 Skin 0.33 protein_coding synonymous_variant LOW 93T>C Ala31Ala
M0093007 BJGDHMCD_00005 4032 3 Skin 0.25 protein_coding missense_variant MODERATE 1231G>T Val411Phe
M0093008 BJGDHMCD_00005 4120 3 Skin 0.25 protein_coding synonymous_variant LOW 1143C>A Ile381Ile
M0093009 BJGDHMCD_00005 4177 4 Skin 0.33 protein_coding synonymous_variant LOW 1086G>C Pro362Pro
M0093010 BJGDHMCD_00005 4196 4 Skin 0.33 protein_coding missense_variant MODERATE 1067G>C Gly356Ala
M0093011 BJGDHMCD_00005 4237 4 Skin 0.33 protein_coding synonymous_variant LOW 1026T>A Gly342Gly
M0093012 BJGDHMCD_00005 4486 3 Skin 0.25 protein_coding synonymous_variant LOW 777C>T Arg259Arg
M0093013 BJGDHMCD_00005 4591 3 Skin 0.25 protein_coding synonymous_variant LOW 672C>T Asn224Asn
M0093014 BJGDHMCD_00005 4600 4 Skin 0.33 protein_coding synonymous_variant LOW 663A>G Thr221Thr
M0093015 BJGDHMCD_00005 4630 4 Skin 0.33 protein_coding synonymous_variant LOW 633T>C Phe211Phe
M0093016 BJGDHMCD_00005 4648 4 Skin 0.33 protein_coding synonymous_variant LOW 615T>C Gly205Gly
M0093017 BJGDHMCD_00005 4651 3 Skin 0.25 protein_coding synonymous_variant LOW 612C>A Ile204Ile
M0093018 BJGDHMCD_00005 4744 3 Skin 0.25 protein_coding missense_variant MODERATE 519A>G Ile173Met
M0093019 BJGDHMCD_00005 4759 3 Skin 0.25 protein_coding synonymous_variant LOW 504G>C Ala168Ala
M0093020 BJGDHMCD_00005 4774 3 Skin 0.25 protein_coding synonymous_variant LOW 489T>C Thr163Thr
M0093021 BJGDHMCD_00005 4804 3 Skin 0.25 protein_coding synonymous_variant LOW 459C>A Ser153Ser
M0093022 BJGDHMCD_00005 4845 3 Skin 0.25 protein_coding synonymous_variant LOW 418T>C Leu140Leu
M0093023 BJGDHMCD_00005 4855 3 Skin 0.25 protein_coding synonymous_variant LOW 408A>C Val136Val
M0093024 BJGDHMCD_00005 4882 3 Skin 0.25 protein_coding synonymous_variant LOW 381C>T Ala127Ala
M0093025 BJGDHMCD_00005 4893 3 Skin 0.25 protein_coding synonymous_variant LOW 370T>C Leu124Leu
M0093026 BJGDHMCD_00005 4903 3 Skin 0.25 protein_coding synonymous_variant LOW 360G>A Glu120Glu
M0093027 BJGDHMCD_00005 4935 3 Skin 0.25 protein_coding synonymous_variant LOW 328C>T Leu110Leu
M0093028 BJGDHMCD_00005 4945 3 Skin 0.25 protein_coding synonymous_variant LOW 318A>C Ala106Ala
M0093029 BJGDHMCD_00005 4960 3 Skin 0.25 protein_coding synonymous_variant LOW 303C>T Arg101Arg
M0093030 BJGDHMCD_00005 4964 3 Skin 0.25 protein_coding missense_variant MODERATE 299C>G Thr100Ser
M0093031 BJGDHMCD_00005 4972 3 Skin 0.25 protein_coding synonymous_variant LOW 291A>G Ala97Ala
M0093032 BJGDHMCD_00005 4978 3 Skin 0.25 protein_coding synonymous_variant LOW 285G>A Ala95Ala
M0093033 BJGDHMCD_00005 4981 3 Skin 0.25 protein_coding synonymous_variant LOW 282A>G Glu94Glu
M0093034 BJGDHMCD_00005 5009 3 Skin 0.25 protein_coding missense_variant MODERATE 254A>C Lys85Thr
M0093035 BJGDHMCD_00005 5011 3 Skin 0.25 protein_coding synonymous_variant LOW 252G>T Ala84Ala
M0093036 BJGDHMCD_00005 5014 3 Skin 0.25 protein_coding synonymous_variant LOW 249C>T Gly83Gly
M0093037 BJGDHMCD_00005 5047 3 Skin 0.25 protein_coding synonymous_variant LOW 216T>C Leu72Leu
M0093038 BJGDHMCD_00005 5086 3 Skin 0.25 protein_coding synonymous_variant LOW 177A>G Ala59Ala
M0093039 BJGDHMCD_00005 5134 3 Skin 0.25 protein_coding synonymous_variant LOW 129G>A Ala43Ala
M0093040 BJGDHMCD_00005 5158 3 Skin 0.25 protein_coding synonymous_variant LOW 105C>G Thr35Thr
M0093041 BJGDHMCD_00005 5164 3 Skin 0.25 protein_coding synonymous_variant LOW 99G>C Thr33Thr
M0093042 BJGDHMCD_00005 5167 3 Skin 0.25 protein_coding synonymous_variant LOW 96G>C Thr32Thr
M0093043 BJGDHMCD_00005 5193 3 Skin 0.25 protein_coding missense_variant MODERATE 70T>A Ser24Thr
M0093044 BJGDHMCD_00005 5194 3 Skin 0.25 protein_coding synonymous_variant LOW 69G>A Arg23Arg
M0093045 BJGDHMCD_00005 5196 3 Skin 0.25 protein_coding synonymous_variant LOW 67C>A Arg23Arg
M0093046 BJGDHMCD_00005 5236 3 Skin 0.25 protein_coding synonymous_variant LOW 27A>G Gln9Gln
M0093047 BJGDHMCD_00005 5242 3 Skin 0.25 protein_coding synonymous_variant LOW 21A>T Ser7Ser
M0093048 BJGDHMCD_00006 5421 3 Skin 0.25 protein_coding synonymous_variant LOW 615G>C Arg205Arg
M0093049 BJGDHMCD_00006 5739 3 Skin 0.25 protein_coding missense_variant MODERATE 297C>A Asn99Lys
M0093050 BJGDHMCD_00006 5781 3 Skin 0.25 protein_coding synonymous_variant LOW 255C>T Cys85Cys
M0093051 BJGDHMCD_00006 5787 3 Skin 0.25 protein_coding synonymous_variant LOW 249C>A Gly83Gly
M0093052 BJGDHMCD_00006 5799 3 Skin 0.25 protein_coding synonymous_variant LOW 237C>G Val79Val
M0093053 BJGDHMCD_00006 5868 3 Skin 0.25 protein_coding synonymous_variant LOW 168G>A Gly56Gly
M0093054 BJGDHMCD_00006 5879 3 Skin 0.25 protein_coding synonymous_variant LOW 157C>T Leu53Leu
M0093055 BJGDHMCD_00006 5904 3 Skin 0.25 protein_coding synonymous_variant LOW 132G>A Ala44Ala
M0093056 BJGDHMCD_00006 5931 3 Skin 0.25 protein_coding synonymous_variant LOW 105T>C Ala35Ala
M0093057 BJGDHMCD_00006 5937 3 Skin 0.25 protein_coding synonymous_variant LOW 99A>G Glu33Glu
M0093058 BJGDHMCD_00006 5958 3 Skin 0.25 protein_coding synonymous_variant LOW 78C>T Phe26Phe
M0093059 BJGDHMCD_00006 5979 3 Skin 0.25 protein_coding synonymous_variant LOW 57C>A Ala19Ala
M0093060 BJGDHMCD_00006 6006 3 Skin 0.25 protein_coding synonymous_variant LOW 30T>C Gly10Gly
M0093061 BJGDHMCD_00006 6018 3 Skin 0.25 protein_coding synonymous_variant LOW 18C>T Asn6Asn
M0093062 BJGDHMCD_00007 6050 3 Skin 0.25 protein_coding missense_variant MODERATE 1763A>C Lys588Thr
M0093063 BJGDHMCD_00007 6063 3 Skin 0.25 protein_coding missense_variant MODERATE 1750C>T Pro584Ser
M0093064 BJGDHMCD_00007 6094 3 Skin 0.25 protein_coding synonymous_variant LOW 1719T>G Leu573Leu
M0093065 BJGDHMCD_00007 6117 3 Skin 0.25 protein_coding synonymous_variant LOW 1696T>C Leu566Leu
M0093066 BJGDHMCD_00007 6140 3 Skin 0.25 protein_coding missense_variant MODERATE 1673T>C Leu558Pro
M0093067 BJGDHMCD_00007 6175 3 Skin 0.25 protein_coding synonymous_variant LOW 1638T>C Gly546Gly
M0093068 BJGDHMCD_00007 6292 3 Skin 0.25 protein_coding synonymous_variant LOW 1521G>C Gly507Gly
M0093069 BJGDHMCD_00003 7886 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4785C>A None
M0093070 BJGDHMCD_00003 7895 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4794A>G None
M0093071 BJGDHMCD_00003 7898 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4797A>G None
M0093072 BJGDHMCD_00003 7913 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4812C>A None
M0093073 BJGDHMCD_00008 8022 3 Skin 0.25 protein_coding missense_variant MODERATE 442G>A Val148Ile
M0093074 BJGDHMCD_00004 8491 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4659C>T None
M0093075 BJGDHMCD_00004 8507 3 Skin 0.25 protein_coding upstream_gene_variant MODIFIER -4675G>T None
M0093076 BJGDHMCD_00004 8525 4 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -4693G>T None
M0093077 BJGDHMCD_00009 8565 4 Skin 0.33 protein_coding synonymous_variant LOW 1731A>G Thr577Thr
M0093078 BJGDHMCD_00009 8589 3 Skin 0.25 protein_coding synonymous_variant LOW 1707T>C Phe569Phe
M0093079 BJGDHMCD_00009 8718 3 Skin 0.25 protein_coding synonymous_variant LOW 1578T>G Ala526Ala
M0093080 BJGDHMCD_00009 8844 4 Skin 0.33 protein_coding synonymous_variant LOW 1452A>C Ala484Ala
M0093081 BJGDHMCD_00009 8886 3 Skin 0.25 protein_coding synonymous_variant LOW 1410C>A Pro470Pro
M0093082 BJGDHMCD_00009 8937 4 Skin 0.33 protein_coding missense_variant MODERATE 1359A>C Gln453His
M0093083 BJGDHMCD_00009 9778 3 Skin 0.25 protein_coding missense_variant MODERATE 518T>C Val173Ala
M0093084 BJGDHMCD_00009 10032 3 Skin 0.25 protein_coding synonymous_variant LOW 264A>G Glu88Glu
M0093085 BJGDHMCD_00009 10073 3 Skin 0.25 protein_coding missense_variant MODERATE 223A>G Thr75Ala
M0093086 BJGDHMCD_00010 11056 3 Skin 0.25 protein_coding missense_variant MODERATE 499G>A Gly167Ser
M0093087 BJGDHMCD_00010 11058 3 Skin 0.25 protein_coding missense_variant MODERATE 497A>T Gln166Leu
M0093088 BJGDHMCD_00010 11078 3 Skin 0.25 protein_coding synonymous_variant LOW 477T>C Ala159Ala
M0093089 BJGDHMCD_00010 11081 3 Skin 0.25 protein_coding synonymous_variant LOW 474C>T Ala158Ala
M0093090 BJGDHMCD_00010 11085 3 Skin 0.25 protein_coding missense_variant MODERATE 470C>T Ala157Val
M0093091 BJGDHMCD_00010 11120 3 Skin 0.25 protein_coding synonymous_variant LOW 435T>C Asp145Asp
M0093092 BJGDHMCD_00010 11132 3 Skin 0.25 protein_coding synonymous_variant LOW 423C>T Ile141Ile
M0093093 BJGDHMCD_00010 11375 3 Skin 0.25 protein_coding synonymous_variant LOW 180C>G Val60Val
M0093094 BJGDHMCD_00010 11378 3 Skin 0.25 protein_coding synonymous_variant LOW 177T>G Val59Val
M0093095 BJGDHMCD_00010 11399 3 Skin 0.25 protein_coding synonymous_variant LOW 156C>A Ala52Ala
M0093096 BJGDHMCD_00010 11423 3 Skin 0.25 protein_coding synonymous_variant LOW 132G>A Thr44Thr
M0093097 BJGDHMCD_00010 11531 3 Skin 0.25 protein_coding synonymous_variant LOW 24G>C Pro8Pro
M0093098 BJGDHMCD_00011 11660 3 Skin 0.25 protein_coding synonymous_variant LOW 2574G>T Gly858Gly
M0093099 BJGDHMCD_00011 11750 3 Skin 0.25 protein_coding synonymous_variant LOW 2484G>C Arg828Arg
M0093100 BJGDHMCD_00011 11753 3 Skin 0.25 protein_coding synonymous_variant LOW 2481C>T Gly827Gly
M0093101 BJGDHMCD_00011 11966 3 Skin 0.25 protein_coding synonymous_variant LOW 2268C>A Thr756Thr
M0093102 BJGDHMCD_00011 11990 3 Skin 0.25 protein_coding synonymous_variant LOW 2244C>T Val748Val
M0093103 BJGDHMCD_00011 11992 3 Skin 0.25 protein_coding missense_variant MODERATE 2242G>A Val748Ile
M0093104 BJGDHMCD_00011 11997 3 Skin 0.25 protein_coding missense_variant MODERATE 2237T>A Phe746Tyr
M0093105 BJGDHMCD_00011 12024 3 Skin 0.25 protein_coding missense_variant MODERATE 2210G>A Arg737Lys
M0093106 BJGDHMCD_00011 12071 3 Skin 0.25 protein_coding missense_variant MODERATE 2163T>G Asn721Lys
M0093107 BJGDHMCD_00011 12075 3 Skin 0.25 protein_coding missense_variant MODERATE 2159A>G Lys720Arg
M0093108 BJGDHMCD_00011 12082 3 Skin 0.25 protein_coding missense_variant MODERATE 2152G>C Ala718Pro
M0093109 BJGDHMCD_00011 12126 3 Skin 0.25 protein_coding missense_variant MODERATE 2108A>C Glu703Ala
M0093110 BJGDHMCD_00011 12140 3 Skin 0.25 protein_coding synonymous_variant LOW 2094C>G Pro698Pro
M0093111 BJGDHMCD_00011 12164 3 Skin 0.25 protein_coding synonymous_variant LOW 2070A>G Glu690Glu
M0093112 BJGDHMCD_00011 12185 3 Skin 0.25 protein_coding synonymous_variant LOW 2049C>T Phe683Phe
M0093113 BJGDHMCD_00011 12248 3 Skin 0.25 protein_coding synonymous_variant LOW 1986G>A Glu662Glu
M0093114 BJGDHMCD_00011 12257 3 Skin 0.25 protein_coding synonymous_variant LOW 1977C>T Phe659Phe
M0093115 BJGDHMCD_00011 12281 3 Skin 0.25 protein_coding synonymous_variant LOW 1953C>T Asn651Asn
M0093116 BJGDHMCD_00011 12289 3 Skin 0.25 protein_coding missense_variant MODERATE 1945A>G Ile649Val
M0093117 BJGDHMCD_00011 12299 3 Skin 0.25 protein_coding missense_variant MODERATE 1935G>C Met645Ile
M0093118 BJGDHMCD_00011 12332 3 Skin 0.25 protein_coding synonymous_variant LOW 1902C>T Gly634Gly
M0093119 BJGDHMCD_00011 12350 3 Skin 0.25 protein_coding synonymous_variant LOW 1884G>A Thr628Thr
M0093120 BJGDHMCD_00011 12373 3 Skin 0.25 protein_coding synonymous_variant LOW 1861C>T Leu621Leu
M0093121 BJGDHMCD_00011 12383 3 Skin 0.25 protein_coding synonymous_variant LOW 1851C>T Arg617Arg
M0093122 BJGDHMCD_00011 12569 3 Skin 0.25 protein_coding synonymous_variant LOW 1665G>A Glu555Glu
M0093123 BJGDHMCD_00011 12593 3 Skin 0.25 protein_coding synonymous_variant LOW 1641T>C Arg547Arg
M0093124 BJGDHMCD_00011 12825 3 Skin 0.25 protein_coding missense_variant MODERATE 1409A>C Glu470Ala
M0093125 BJGDHMCD_00011 13100 3 Skin 0.25 protein_coding synonymous_variant LOW 1134C>T Thr378Thr
M0093126 BJGDHMCD_00011 13165 3 Skin 0.25 protein_coding missense_variant MODERATE 1069A>T Thr357Ser
M0093127 BJGDHMCD_00011 13187 3 Skin 0.25 protein_coding synonymous_variant LOW 1047T>C Asp349Asp
M0093128 BJGDHMCD_00011 13205 3 Skin 0.25 protein_coding synonymous_variant LOW 1029C>T Thr343Thr
M0093129 BJGDHMCD_00011 13217 3 Skin 0.25 protein_coding synonymous_variant LOW 1017A>G Lys339Lys
M0093130 BJGDHMCD_00011 13242 3 Skin 0.25 protein_coding missense_variant MODERATE 992A>T Tyr331Phe
M0093131 BJGDHMCD_00011 13244 3 Skin 0.25 protein_coding synonymous_variant LOW 990C>G Ala330Ala
M0093132 BJGDHMCD_00011 13271 3 Skin 0.25 protein_coding synonymous_variant LOW 963C>T Tyr321Tyr
M0093133 BJGDHMCD_00011 13292 3 Skin 0.25 protein_coding synonymous_variant LOW 942C>T Asp314Asp
M0093134 BJGDHMCD_00011 13331 3 Skin 0.25 protein_coding synonymous_variant LOW 903G>A Leu301Leu
M0093135 BJGDHMCD_00011 13337 3 Skin 0.25 protein_coding synonymous_variant LOW 897C>T Asp299Asp
M0093136 BJGDHMCD_00011 13358 3 Skin 0.25 protein_coding synonymous_variant LOW 876G>C Leu292Leu
M0093137 BJGDHMCD_00011 13370 3 Skin 0.25 protein_coding synonymous_variant LOW 864T>C Val288Val
M0093138 BJGDHMCD_00011 13382 3 Skin 0.25 protein_coding synonymous_variant LOW 852A>G Ala284Ala
M0093139 BJGDHMCD_00011 13388 3 Skin 0.25 protein_coding synonymous_variant LOW 846C>A Arg282Arg
M0093140 BJGDHMCD_00011 13394 3 Skin 0.25 protein_coding synonymous_variant LOW 840C>T Asn280Asn
M0093141 BJGDHMCD_00011 13400 3 Skin 0.25 protein_coding synonymous_variant LOW 834G>A Glu278Glu
M0093142 BJGDHMCD_00011 13433 3 Skin 0.25 protein_coding synonymous_variant LOW 801C>G Val267Val
M0093143 BJGDHMCD_00011 13447 3 Skin 0.25 protein_coding synonymous_variant LOW 787T>C Leu263Leu
M0093144 BJGDHMCD_00011 13517 3 Skin 0.25 protein_coding synonymous_variant LOW 717C>T Gly239Gly
M0093145 BJGDHMCD_00011 13559 3 Skin 0.25 protein_coding synonymous_variant LOW 675C>T Cys225Cys
M0093146 BJGDHMCD_00011 13583 3 Skin 0.25 protein_coding synonymous_variant LOW 651C>T Asp217Asp
M0093147 BJGDHMCD_00011 13598 3 Skin 0.25 protein_coding synonymous_variant LOW 636C>T Asn212Asn
M0093148 BJGDHMCD_00011 13649 3 Skin 0.25 protein_coding synonymous_variant LOW 585A>T Leu195Leu
M0093149 BJGDHMCD_00011 13679 3 Skin 0.25 protein_coding synonymous_variant LOW 555C>T Tyr185Tyr
M0093150 BJGDHMCD_00011 13682 3 Skin 0.25 protein_coding synonymous_variant LOW 552T>C Asp184Asp
M0093151 BJGDHMCD_00011 13722 3 Skin 0.25 protein_coding missense_variant MODERATE 512G>A Gly171Glu
M0093152 BJGDHMCD_00011 13919 3 Skin 0.25 protein_coding synonymous_variant LOW 315C>T His105His
M0093153 BJGDHMCD_00011 14024 3 Skin 0.25 protein_coding synonymous_variant LOW 210C>T Phe70Phe
M0093154 BJGDHMCD_00011 14032 3 Skin 0.25 protein_coding missense_variant MODERATE 202G>T Asp68Tyr
M0093155 BJGDHMCD_00011 14042 3 Skin 0.25 protein_coding synonymous_variant LOW 192T>G Val64Val
M0093156 BJGDHMCD_00011 14045 3 Skin 0.25 protein_coding synonymous_variant LOW 189A>C Pro63Pro
M0093157 BJGDHMCD_00011 14087 3 Skin 0.25 protein_coding synonymous_variant LOW 147A>G Thr49Thr
M0093158 BJGDHMCD_00011 14090 3 Skin 0.25 protein_coding synonymous_variant LOW 144G>A Ala48Ala
M0093159 BJGDHMCD_00011 14096 3 Skin 0.25 protein_coding synonymous_variant LOW 138T>C Ala46Ala
M0093160 BJGDHMCD_00011 14129 3 Skin 0.25 protein_coding synonymous_variant LOW 105G>T Leu35Leu
M0093161 BJGDHMCD_00011 14180 3 Skin 0.25 protein_coding synonymous_variant LOW 54T>C Asp18Asp






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
BJGDHMCD_00050 AUH35618.1|GH23 100 1.65e-256 1 370 1 0.9561
BJGDHMCD_00055 AUH35660.1|GH23 100 3.6e-107 1 153 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term